View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21538_low_10 (Length: 460)

Name: NF21538_low_10
Description: NF21538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21538_low_10
NF21538_low_10
[»] chr4 (55 HSPs)
chr4 (1-448)||(11821660-11822107)
chr4 (125-368)||(30470841-30471080)
chr4 (100-363)||(18830573-18830831)
chr4 (138-371)||(5448210-5448439)
chr4 (183-372)||(47943525-47943714)
chr4 (195-372)||(10380684-10380861)
chr4 (101-365)||(2634023-2634283)
chr4 (101-372)||(2063159-2063426)
chr4 (214-372)||(55382664-55382822)
chr4 (103-364)||(5324684-5324937)
chr4 (101-301)||(10757569-10757765)
chr4 (101-301)||(10970740-10970936)
chr4 (96-365)||(2232366-2232629)
chr4 (132-307)||(37694930-37695101)
chr4 (102-369)||(30378758-30379017)
chr4 (218-362)||(3369988-3370132)
chr4 (122-350)||(18836300-18836523)
chr4 (208-367)||(37695034-37695193)
chr4 (208-372)||(1387444-1387609)
chr4 (102-372)||(9826645-9826911)
chr4 (122-282)||(22017902-22018058)
chr4 (182-365)||(18500619-18500801)
chr4 (246-372)||(22017990-22018116)
chr4 (96-225)||(47463808-47463933)
chr4 (122-314)||(1387299-1387486)
chr4 (195-314)||(47144760-47144879)
chr4 (101-275)||(12140666-12140836)
chr4 (247-367)||(29908907-29909027)
chr4 (282-371)||(22017896-22017985)
chr4 (133-222)||(3391170-3391255)
chr4 (247-365)||(8951129-8951247)
chr4 (291-372)||(47463827-47463908)
chr4 (203-275)||(29908967-29909039)
chr4 (282-372)||(2063322-2063412)
chr4 (101-171)||(55382577-55382647)
chr4 (102-172)||(55382765-55382835)
chr4 (282-350)||(5448372-5448440)
chr4 (290-354)||(12140698-12140762)
chr4 (281-356)||(37694929-37695004)
chr4 (282-372)||(18830588-18830677)
chr4 (138-172)||(18836488-18836522)
chr4 (140-282)||(8951058-8951196)
chr4 (291-372)||(10757583-10757664)
chr4 (291-372)||(10970754-10970835)
chr4 (243-312)||(55382661-55382730)
chr4 (270-314)||(10757702-10757746)
chr4 (270-314)||(10970873-10970917)
chr4 (282-369)||(9826808-9826895)
chr4 (126-177)||(37695136-37695187)
chr4 (138-172)||(18830783-18830817)
chr4 (208-241)||(3370045-3370078)
chr4 (246-307)||(12140775-12140836)
chr4 (301-373)||(18836292-18836363)
chr4 (208-284)||(47144758-47144834)
chr4 (333-369)||(47463916-47463952)
[»] chr3 (44 HSPs)
chr3 (138-372)||(48755340-48755571)
chr3 (96-359)||(21514770-21515029)
chr3 (208-372)||(15031201-15031365)
chr3 (101-314)||(15031291-15031500)
chr3 (101-372)||(33343019-33343284)
chr3 (138-365)||(44967875-44968097)
chr3 (122-320)||(14434660-14434854)
chr3 (142-368)||(1426501-1426714)
chr3 (133-327)||(11989076-11989266)
chr3 (101-318)||(15005025-15005238)
chr3 (98-282)||(26498544-26498724)
chr3 (140-347)||(26920193-26920396)
chr3 (246-368)||(26498656-26498778)
chr3 (102-372)||(18445405-18445671)
chr3 (279-367)||(42453061-42453149)
chr3 (101-261)||(38498227-38498383)
chr3 (202-372)||(43562696-43562866)
chr3 (273-368)||(20758976-20759071)
chr3 (122-260)||(20759052-20759186)
chr3 (282-371)||(38498279-38498368)
chr3 (282-372)||(20759103-20759193)
chr3 (246-368)||(38498152-38498274)
chr3 (197-294)||(36383089-36383186)
chr3 (288-368)||(39541691-39541771)
chr3 (297-372)||(26498561-26498636)
chr3 (246-368)||(7300159-7300280)
chr3 (296-373)||(21514934-21515011)
chr3 (192-268)||(7300137-7300213)
chr3 (282-373)||(11989057-11989148)
chr3 (199-327)||(26840049-26840174)
chr3 (282-368)||(39541786-39541872)
chr3 (133-243)||(39541752-39541858)
chr3 (282-350)||(48755504-48755572)
chr3 (282-369)||(41984921-41985008)
chr3 (282-372)||(15031396-15031486)
chr3 (126-172)||(26498725-26498771)
chr3 (282-367)||(14434658-14434743)
chr3 (96-172)||(15031182-15031258)
chr3 (96-168)||(33343000-33343072)
chr3 (128-172)||(38498161-38498205)
chr3 (282-369)||(18445421-18445508)
chr3 (301-367)||(33412222-33412288)
chr3 (126-171)||(39541698-39541743)
chr3 (282-350)||(44968031-44968098)
[»] chr6 (18 HSPs)
chr6 (101-372)||(13536573-13536841)
chr6 (101-368)||(19295280-19295543)
chr6 (96-372)||(25089165-25089437)
chr6 (140-359)||(10862039-10862253)
chr6 (96-372)||(10587881-10588137)
chr6 (96-372)||(21222459-21222733)
chr6 (94-314)||(26705099-26705315)
chr6 (122-368)||(10672638-10672879)
chr6 (205-369)||(12651182-12651345)
chr6 (208-292)||(26705089-26705173)
chr6 (291-360)||(10587912-10587981)
chr6 (290-350)||(28752277-28752337)
chr6 (282-369)||(21222481-21222568)
chr6 (294-360)||(13536749-13536815)
chr6 (282-372)||(19295294-19295384)
chr6 (297-369)||(26705219-26705291)
chr6 (282-371)||(10672632-10672721)
chr6 (96-172)||(10588080-10588156)
[»] chr1 (15 HSPs)
chr1 (101-371)||(50335455-50335721)
chr1 (103-372)||(37607985-37608249)
chr1 (102-365)||(13735465-13735723)
chr1 (99-372)||(8097712-8097981)
chr1 (232-350)||(32374092-32374203)
chr1 (133-372)||(42847038-42847266)
chr1 (272-367)||(11633212-11633307)
chr1 (291-361)||(13735631-13735700)
chr1 (300-372)||(37608165-37608237)
chr1 (96-172)||(50335435-50335511)
chr1 (282-350)||(50335617-50335685)
chr1 (282-372)||(32373999-32374088)
chr1 (199-244)||(11633271-11633316)
chr1 (208-260)||(32374100-32374152)
chr1 (288-364)||(42847200-42847276)
[»] chr7 (29 HSPs)
chr7 (101-354)||(14197458-14197707)
chr7 (96-372)||(27508589-27508861)
chr7 (122-372)||(38761013-38761258)
chr7 (104-368)||(5080111-5080371)
chr7 (101-372)||(15000659-15000926)
chr7 (138-350)||(6441381-6441588)
chr7 (101-317)||(45012848-45013059)
chr7 (122-372)||(37787707-37787949)
chr7 (20-96)||(32921504-32921580)
chr7 (93-372)||(3404471-3404744)
chr7 (249-371)||(43257375-43257497)
chr7 (246-365)||(36150868-36150987)
chr7 (101-261)||(36150940-36151096)
chr7 (295-372)||(45013060-45013137)
chr7 (101-261)||(43257263-43257419)
chr7 (282-371)||(27508752-27508841)
chr7 (105-218)||(15272326-15272435)
chr7 (282-360)||(15272348-15272426)
chr7 (294-350)||(6441380-6441436)
chr7 (96-172)||(38761201-38761277)
chr7 (288-355)||(3404638-3404705)
chr7 (282-372)||(5080122-5080212)
chr7 (126-172)||(27508600-27508646)
chr7 (315-372)||(45012862-45012919)
chr7 (296-372)||(15000836-15000912)
chr7 (138-172)||(15000682-15000716)
chr7 (291-372)||(38761006-38761086)
chr7 (128-177)||(43257436-43257485)
chr7 (97-177)||(36150843-36150923)
[»] chr5 (28 HSPs)
chr5 (101-372)||(21943742-21944009)
chr5 (128-371)||(10760034-10760272)
chr5 (95-372)||(13753222-13753495)
chr5 (105-327)||(17497053-17497271)
chr5 (96-368)||(2555456-2555724)
chr5 (101-327)||(30100613-30100832)
chr5 (104-289)||(21211419-21211599)
chr5 (184-368)||(34419497-34419681)
chr5 (197-372)||(30852599-30852767)
chr5 (103-364)||(20429878-20430131)
chr5 (102-372)||(19491685-19491951)
chr5 (203-371)||(19564752-19564920)
chr5 (101-368)||(31912195-31912458)
chr5 (180-327)||(11298017-11298164)
chr5 (150-327)||(12895586-12895757)
chr5 (282-372)||(21211430-21211520)
chr5 (282-360)||(17497171-17497249)
chr5 (203-276)||(32539365-32539437)
chr5 (282-369)||(19491848-19491935)
chr5 (310-365)||(21211603-21211658)
chr5 (282-372)||(13753242-13753332)
chr5 (282-372)||(21943756-21943846)
chr5 (138-284)||(43548870-43549015)
chr5 (97-156)||(34419676-34419735)
chr5 (247-293)||(21211526-21211572)
chr5 (138-172)||(21211608-21211642)
chr5 (96-160)||(30852580-30852644)
chr5 (282-350)||(43548948-43549016)
[»] chr2 (12 HSPs)
chr2 (101-366)||(22092879-22093140)
chr2 (138-372)||(24006916-24007146)
chr2 (182-372)||(39598583-39598773)
chr2 (184-366)||(31819933-31820115)
chr2 (190-350)||(31499434-31499594)
chr2 (101-282)||(32092758-32092935)
chr2 (247-350)||(32092868-32092971)
chr2 (220-365)||(8219160-8219304)
chr2 (291-372)||(32092772-32092853)
chr2 (290-350)||(24006915-24006975)
chr2 (249-330)||(17914060-17914141)
chr2 (208-275)||(8219217-8219284)
[»] scaffold0102 (1 HSPs)
scaffold0102 (142-365)||(23912-24131)
[»] chr8 (33 HSPs)
chr8 (122-372)||(25149258-25149504)
chr8 (138-367)||(35202616-35202842)
chr8 (101-365)||(23976089-23976349)
chr8 (142-353)||(18324029-18324236)
chr8 (199-372)||(37543885-37544058)
chr8 (212-372)||(21124340-21124500)
chr8 (101-367)||(22469432-22469693)
chr8 (202-372)||(4289021-4289191)
chr8 (246-365)||(12106975-12107094)
chr8 (202-327)||(41358778-41358903)
chr8 (101-314)||(21124430-21124639)
chr8 (236-372)||(22426860-22426995)
chr8 (184-372)||(24609104-24609292)
chr8 (96-279)||(12106861-12107040)
chr8 (180-369)||(22326480-22326669)
chr8 (249-372)||(21184312-21184434)
chr8 (180-314)||(31253977-31254109)
chr8 (232-319)||(29585576-29585663)
chr8 (272-365)||(23625054-23625147)
chr8 (96-243)||(21185804-21185947)
chr8 (282-372)||(12106880-12106970)
chr8 (282-372)||(25149251-25149341)
chr8 (282-359)||(23976117-23976194)
chr8 (93-172)||(21184290-21184369)
chr8 (126-177)||(37494339-37494390)
chr8 (208-282)||(22426917-22426991)
chr8 (208-282)||(29585584-29585658)
chr8 (282-371)||(22469447-22469536)
chr8 (282-360)||(21124535-21124613)
chr8 (198-243)||(23625112-23625157)
chr8 (96-177)||(25149442-25149523)
chr8 (251-296)||(37494422-37494467)
chr8 (282-350)||(35202775-35202843)
[»] scaffold0003 (1 HSPs)
scaffold0003 (197-324)||(314139-314266)
[»] scaffold0066 (1 HSPs)
scaffold0066 (195-360)||(15390-15555)
[»] scaffold0407 (6 HSPs)
scaffold0407 (208-350)||(969-1111)
scaffold0407 (208-350)||(7433-7575)
scaffold0407 (138-314)||(872-1043)
scaffold0407 (138-314)||(7336-7507)
scaffold0407 (282-350)||(871-938)
scaffold0407 (282-350)||(7335-7402)
[»] scaffold0011 (2 HSPs)
scaffold0011 (101-369)||(190177-190441)
scaffold0011 (282-372)||(190191-190281)
[»] scaffold0026 (1 HSPs)
scaffold0026 (102-372)||(57462-57728)
[»] scaffold0024 (2 HSPs)
scaffold0024 (102-372)||(127817-128083)
scaffold0024 (282-369)||(127980-128067)
[»] scaffold1300 (4 HSPs)
scaffold1300 (102-283)||(1452-1629)
scaffold1300 (282-369)||(1526-1613)
scaffold1300 (101-172)||(1356-1427)
scaffold1300 (270-314)||(1453-1497)
[»] scaffold0049 (4 HSPs)
scaffold0049 (108-256)||(59711-59855)
scaffold0049 (282-372)||(59718-59808)
scaffold0049 (246-286)||(59813-59853)
scaffold0049 (272-314)||(59807-59849)
[»] scaffold0047 (2 HSPs)
scaffold0047 (122-282)||(11676-11830)
scaffold0047 (246-368)||(11623-11744)
[»] scaffold0039 (2 HSPs)
scaffold0039 (101-372)||(27488-27742)
scaffold0039 (282-372)||(27502-27592)
[»] scaffold0018 (4 HSPs)
scaffold0018 (184-259)||(72008-72083)
scaffold0018 (298-369)||(71924-71995)
scaffold0018 (301-372)||(72106-72177)
scaffold0018 (101-174)||(72118-72191)


Alignment Details
Target: chr4 (Bit Score: 376; Significance: 0; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 1 - 448
Target Start/End: Complemental strand, 11822107 - 11821660
Alignment:
Q  1 tcccactaatatattacatatatatagtactatgtagtatgacaaagtggagcagttttctttctcctgtcaatgtctttaggccctttaaaaaatggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11822107 tcccactaatatattacatatatatagtactatgtagtatgacaaagtggagcagttttctttctcctgtcaatgtctttaggccctttaaaaaatggga 11822008  T
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    ||||||| |||||||| || |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||  |||||||||| ||||||    
T  11822007 aattagttactttagtccttcaatgggaaatgagtacttactttagtccctgaatgcagagaaattgcaaaacaatcaatctctgaatttagactttgtt 11821908  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11821907 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacgaaatctgcattcagggactaaattaactaacagagtct 11821808  T
Q  301 acattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggacatatttaaagagaacattctcgaaggat 400  Q
    |||||||  |||||||||||||||||| || ||| ||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||| ||||||    
T  11821807 acattcaaagactattttgcaatttatctgtatttaaggactaaagtgacgacttctttcctatttagggacatatttaaagagatcattctcaaaggat 11821708  T
Q  401 atatttattaatttcaacatcttaggtaggtaactcttgaatgatatt 448  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11821707 atatttattaatttcaacatcttaggtaggtaactcttgaatgatatt 11821660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 125 - 368
Target Start/End: Original strand, 30470841 - 30471080
Alignment:
Q  125 gggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaagtga 224  Q
    |||||||||||| |||||||||| |||||||||||| ||||||||||||| ||    | | ||| |||  ||||||||||||||||||||||||||||||    
T  30470841 gggaaatgagtagtcactttagttcctgaatgcagagaaattgcaaaacactc----cctaaatgtagcatttgttggtcaatttcagggactaaagtga 30470936  T
Q  225 ctaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatt 324  Q
    |||||||||||||||||||  ||||||||||| ||||||| ||||||||||||||||||||| | ||||| ||||||||||||||||||||||| |||||    
T  30470937 ctaacagagtctacattcaatgactaaattgattaacggagtctgcattcagggactaaattgattaacatagtctacattcagggactattttacaatt 30471036  T
Q  325 tatttgaattcaaggactaaagtgacgactcctttcctattcag 368  Q
    ||| |  ||||| | |||||||||||||||| ||| ||||||||    
T  30471037 tatctacattcaggaactaaagtgacgactctttttctattcag 30471080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 100 - 363
Target Start/End: Original strand, 18830573 - 18830831
Alignment:
Q  100 aaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgt 199  Q
    ||||||||||||||||| |   |||| |||||||||| |||||||||||| || ||||||| ||||||| ||||| ||    | ||||| |||||| |||    
T  18830573 aaattagtcactttagtccctgaatgagaaatgagtagtcactttagtcc-tggatgcagataaattgctaaacagtc----cctgaatgtagattctgt 18830667  T
Q  200 tggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtc 299  Q
    |||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||| | ||||||||||||||||||||  ||||||||| ||    
T  18830668 tggtcaatttcagggactaaagtgactaatggagtctacattcagggactaaattgactaacgaagtctgcattcagggactaaatggactaacagaatc 18830767  T
Q  300 tacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttccta 363  Q
    |||||||| ||||||||||||||||||| || ||||| ||||||||||||||| | ||||||||    
T  18830768 tacattcaaggactattttgcaatttatctgcattcagggactaaagtgacgatttctttccta 18830831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 138 - 371
Target Start/End: Complemental strand, 5448439 - 5448210
Alignment:
Q  138 tcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtcta 237  Q
    ||||||||||||||||||||||| ||||||||||||| ||    | ||||| || | | ||||||||||||||||| ||||||||||||||   ||||||    
T  5448439 tcactttagtccctgaatgcagagaaattgcaaaacagtc----cctgaatgtaaactctgttggtcaatttcaggaactaaagtgactaatgaagtcta 5448344  T
Q  238 cattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaa 337  Q
     |||||  |||||||||||| |||||| ||||||| ||||||||||||| ||||||||||| ||||||||||| ||||||| |||||||| || |||||     
T  5448343 tattcagggactaaattgaccaacggagtctgcatccagggactaaattgactaacagagtttacattcaggggctattttacaatttatctgcattcag 5448244  T
Q  338 ggactaaagtgacgactcctttcctattcaggga 371  Q
    |||||||| ||| |||||||||||||||||||||    
T  5448243 ggactaaaatgatgactcctttcctattcaggga 5448210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 183 - 372
Target Start/End: Original strand, 47943525 - 47943714
Alignment:
Q  183 ttgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggacta 282  Q
    |||||| |||||||||||||||||||| |||||||| ||||| ||||| ||||||||||||  || |||||||||||||||   ||||||||| | ||||    
T  47943525 ttgaatgtagattttgttggtcaattttagggactatagtgattaacatagtctacattcagggattaaattgactaacggttcctgcattcaagaacta 47943624  T
Q  283 aattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||| ||||||  |||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||||||||    
T  47943625 aattgactaaccaagtctacattcagggactattttgcaatttatctgcatttaaggactaaagtgacgactcatttcctattcagggac 47943714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 195 - 372
Target Start/End: Original strand, 10380684 - 10380861
Alignment:
Q  195 tttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaaca 294  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |  ||||||||||||||||| | |||||||||||||| |||||| |||||||    
T  10380684 tttgttggtcaatttcagggactaaagtgactaactgagtctacatttagggactaaattgactaacgaagtctgcattcagggattaaattgactaaca 10380783  T
Q  295 gagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||||||||| || |||||||||||||||||| |||||||| || ||||||| ||||||  ||| ||||||| ||||    
T  10380784 gagtctacatttagagactattttgcaatttatctgaattcaggggctaaagttacgacttattttctattcaaggac 10380861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 101 - 365
Target Start/End: Original strand, 2634023 - 2634283
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||||||||||||| |   |||| |||| ||||| ||||||||| | | |||||| || ||||||||||||| ||    | ||||| |||| ||| ||    
T  2634023 aattagtcactttagtccatgaatgagaaaagagtagtcactttagccgccgaatgctgagaaattgcaaaacagtc----cctgaatgtagactttatt 2634118  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
    |||||||||||| ||||||||||| ||||| ||||||||||||  |||||||||||| ||| || ||||||||||||||||||||| |||||||||||||    
T  2634119 ggtcaatttcagcgactaaagtgattaacaaagtctacattcagggactaaattgacgaacagagtctgcattcagggactaaattgactaacagagtct 2634218  T
Q  301 acattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctatt 365  Q
    |||||||| |||||||| ||||||||| |  |||||  ||||||||||| ||||| |||| ||||    
T  2634219 acattcagagactatttagcaatttatctacattcagtgactaaagtgaagactcatttcttatt 2634283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 101 - 372
Target Start/End: Complemental strand, 2063426 - 2063159
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||||||||||||| ||  ||||||||||||||| |||||||| ||| ||| |||||| |||||||||| || ||    | ||||| |||| | ||||    
T  2063426 aattagtcactttagtccttgaatgggaaatgagtagtcactttaatccttgattgcagagaaattgcaaagcagtc----cctgaatgtagactctgtt 2063331  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
    ||||||||| |  ||||||||||||||||| | |||||||| |  ||||||||||||||||||| | ||||||||| ||||||||| ||||||| ||| |    
T  2063330 ggtcaattttaaagactaaagtgactaacaaattctacatttagggactaaattgactaacggagtttgcattcagagactaaattgactaacatagttt 2063231  T
Q  301 acattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||||||  |||||||||  ||||||| || ||||||| || |||||| |||||| |||||| |||||||||    
T  2063230 acattcaatgactattttataatttatctgcattcaagaaccaaagtgccgactcatttcctcttcagggac 2063159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 214 - 372
Target Start/End: Original strand, 55382664 - 55382822
Alignment:
Q  214 gactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggact 313  Q
    |||||||||||||||| |||||||||| ||  |||||||||||||||||||||||||||| |||||| ||||| ||||||| ||||||||||||| ||||    
T  55382664 gactaaagtgactaacggagtctacatccagggactaaattgactaacggaatctgcatttagggacaaaattgactaacaaagtctacattcagagact 55382763  T
Q  314 attttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||||||||||||| || ||||| ||| |||||||||||||| ||||||||||| ||||    
T  55382764 attttgcaatttatctgcattcagggattaaagtgacgactcatttcctattcaaggac 55382822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 103 - 364
Target Start/End: Original strand, 5324684 - 5324937
Alignment:
Q  103 ttagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttgg 202  Q
    |||||||||||||| |   |||| |||| ||||| || |||||| | ||| ||||||| ||||||||||||| ||     |||||| |||| | ||||||    
T  5324684 ttagtcactttagtccctgaatgtgaaaggagtagtcgctttagcctctggatgcagagaaattgcaaaacagtct----ttgaatgtagactctgttgg 5324779  T
Q  203 tcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctac 302  Q
    ||||||||||||||||||||||| |||||||| ||||||||  |||||||||||||||| || |||||||||| | |||||||| ||||||||||||| |    
T  5324780 tcaatttcagggactaaagtgacgaacagagtttacattcaaggactaaattgactaacagagtctgcattcatgaactaaattgactaacagagtctgc 5324879  T
Q  303 attcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctat 364  Q
    | ||||  |||||||| ||||||||    |||| ||||||||||||||||||| ||| ||||    
T  5324880 aatcagaaactattttacaatttat----attcgaggactaaagtgacgactcgttttctat 5324937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 101 - 301
Target Start/End: Original strand, 10757569 - 10757765
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||||||||||||| |   |||| |||||||||| ||||||||||||||||||| ||| ||||||||||||| || ||    | || |||| | ||||    
T  10757569 aattagtcactttagtccctgaatgagaaatgagtagtcactttagtccctgaatgtagataaattgcaaaacagtccat----ggatgtagactatgtt 10757664  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
    ||||||| ||||||| || ||||| ||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||  ||||||||||||    
T  10757665 ggtcaatctcagggattatagtgattaacagagtctacattcagggactaaattgactaacggagtctgcattcagggactaaattcgctaacagagtct 10757764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 101 - 301
Target Start/End: Original strand, 10970740 - 10970936
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||||||||||||| |   |||| |||||||||| ||||||||||||||||||| ||| ||||||||||||| || ||    | || |||| | ||||    
T  10970740 aattagtcactttagtccctgaatgagaaatgagtagtcactttagtccctgaatgtagataaattgcaaaacagtccat----ggatgtagactatgtt 10970835  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
    ||||||| ||||||| || ||||| ||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||  ||||||||||||    
T  10970836 ggtcaatctcagggattatagtgattaacagagtctacattcagggactaaattgactaacggagtctgcattcagggactaaattcgctaacagagtct 10970935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 96 - 365
Target Start/End: Original strand, 2232366 - 2232629
Alignment:
Q  96 tgggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagatt 195  Q
    |||| |||||||||||||||| |   ||||  ||||||||| ||| ||||||||||||||  ||| ||||||||||||||||  ||    ||| ||||||    
T  2232366 tggggaattagtcactttagttcctaaatgaaaaatgagtagtcaatttagtccctgaatagagagaaattgcaaaacaatccctc----aatgtagatt 2232461  T
Q  196 ttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacag 295  Q
     |||||||||||||||||||||||||||| ||| | ||||||||||||  |||||||||| ||||| || ||| ||  |||||| |||||| |||||||     
T  2232462 ctgttggtcaatttcagggactaaagtgattaaaa-agtctacattcagggactaaattggctaacagagtct-caaccagggattaaattgactaacat 2232559  T
Q  296 agtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctatt 365  Q
    |||||||||| | |||||||||| ||||||||||  ||| | ||||||||||||||| ||||||| ||||    
T  2232560 agtctacattgaaggactattttacaatttatttacatttagggactaaagtgacgattcctttcttatt 2232629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 132 - 307
Target Start/End: Original strand, 37694930 - 37695101
Alignment:
Q  132 gagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaagtgactaacag 231  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| ||    | ||||| |||||| ||||||||||||| || ||||||||||||||| ||    
T  37694930 gagtagtcactttagtccctgaatgcagagaaattgcaaaacagtc----cctgaatgtagattgtgttggtcaatttaagtgactaaagtgactaatag 37695025  T
Q  232 agtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattca 307  Q
    |||||| |||||  ||||||||||||||||||  |||||||| ||||| |||||| ||||||||||||| ||||||    
T  37695026 agtctatattcagggactaaattgactaacggggtctgcatttagggattaaattgactaacagagtctgcattca 37695101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 102 - 369
Target Start/End: Complemental strand, 30379017 - 30378758
Alignment:
Q  102 attagtcactttagtg-ctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||||||||||||  ||| ||| ||||||||||| |||||||||||||| |||||||| ||||||||||  | ||  ||  |||||  ||| ||||      
T  30379017 attagtcactttagtctcta-aataggaaatgagtagtcactttagtcccttaatgcagagaaattgcaaagaagtc--tc--tgaatgcagactttg-- 30378925  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
     |||||||||||  ||||||||||||||| ||||||| |||||  |||| ||||||||||| || ||||||||||| |||| |||| |||||||||||||    
T  30378924 -gtcaatttcagacactaaagtgactaacggagtcta-attcagggactgaattgactaacagagtctgcattcagagactgaattgactaacagagtct 30378827  T
Q  301 acattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagg 369  Q
     ||||||| ||||||||||||||||||||  || || |||||||||||| ||||| ||||||| |||||    
T  30378826 gcattcagagactattttgcaatttatttacatccagggactaaagtgatgactcttttcctaatcagg 30378758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 218 - 362
Target Start/End: Complemental strand, 3370132 - 3369988
Alignment:
Q  218 aaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattt 317  Q
    ||||||||||| |||||||||||| | |||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||| |  ||||||||    
T  3370132 aaagtgactaatagagtctacattaagagactaaattgactaacgaagtctgcattcagggactaaattgactaacagagtctacatttaatgactattt 3370033  T
Q  318 tgcaatttatttgaattcaaggactaaagtgacgactcctttcct 362  Q
    |||||||||| || ||||| | |||||| |||| ||| |||||||    
T  3370032 tgcaatttatctggattcaggaactaaaatgacaacttctttcct 3369988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 122 - 350
Target Start/End: Original strand, 18836300 - 18836523
Alignment:
Q  122 aatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaag 221  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||| ||||||| ||    | | ||| |  |   ||||||||||||| | |||||||||    
T  18836300 aatgagaaatgagtagtcactttagtccctgaatgcagataaatt-caaaacagtc----cctaaatgttaacgctgttggtcaattttatggactaaag 18836394  T
Q  222 tgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggacta-ttttgc 320  Q
    |||||||  |||||||||||||  |||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| |||||||| || ||||||    
T  18836395 tgactaatggagtctacattcagggactaaat-gactaacggagtctgcattcagggactaaatggactaacagagtctacgttcagggattacttttgc 18836493  T
Q  321 aatttatttgaattcaaggactaaagtgac 350  Q
    ||||| | || ||||| |||||||||||||    
T  18836494 aatttttctgcattcagggactaaagtgac 18836523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 208 - 367
Target Start/End: Original strand, 37695034 - 37695193
Alignment:
Q  208 ttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattca 307  Q
    ||||||||||||| |||||||| | |||| |||| |  || ||||||||||||| || ||||||||||  || |||||| ||||||||||||||||||||    
T  37695034 ttcagggactaaattgactaacggggtctgcatttagggattaaattgactaacagagtctgcattcaacgattaaattgactaacagagtctacattca 37695133  T
Q  308 gggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattca 367  Q
    | || ||||||||||||||| || |||||||||||||||||| ||||| |||||| ||||    
T  37695134 gagattattttgcaatttatctgcattcaaggactaaagtgatgactcatttccttttca 37695193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 208 - 372
Target Start/End: Original strand, 1387444 - 1387609
Alignment:
Q  208 ttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattca-gggactaaattaactaacagagtctacattc 306  Q
    |||||| |||||||||||||||| ||||||||||||  |||||||||||||||| || |||||||||| ||||||||||| |  |||| | |||||||||    
T  1387444 ttcaggaactaaagtgactaacaaagtctacattcagcgactaaattgactaacagagtctgcattcaggggactaaattgatgaacaaaatctacattc 1387543  T
Q  307 agggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||| |||||| |||||||| || ||||| || ||||| ||| || | |||||||||||||||||    
T  1387544 agggaatattttacaatttatctgcattcagggcctaaaatgatgatttctttcctattcagggac 1387609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 102 - 372
Target Start/End: Complemental strand, 9826911 - 9826645
Alignment:
Q  102 attagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttg 201  Q
    ||||||||||||||| |   |||  |||| ||||| |||||| ||| | |||||||||| ||||||||||||| |     ||||||  |||| | ||||     
T  9826911 attagtcactttagttcctgaatcagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtg----cttgaacgtagactctgtta 9826816  T
Q  202 gtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtcta 301  Q
    |||||||||| ||| ||| ||||||||| ||||||| |||||  || |||||||| ||||| | |||||||||||  ||||| || ||||||| ||| ||    
T  9826815 gtcaatttcaaggattaatgtgactaactgagtctaaattcagggattaaattgattaacgaagtctgcattcagatactaagttgactaacatagtata 9826716  T
Q  302 cattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||||||  ||||||||||||||||| || ||||| ||||||||||||  | | |||||||||||||||||    
T  9826715 cattcagaaactattttgcaatttatctgcattcatggactaaagtgataatttctttcctattcagggac 9826645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 282
Target Start/End: Original strand, 22017902 - 22018058
Alignment:
Q  122 aatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaag 221  Q
    ||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| ||    | ||||| || ||| ||||||||||||||| |||||||||    
T  22017902 aatgggaaaggagtagtcactttagtccctgaatgcagagaaattgcaaaacagtc----cctgaatgtatattctgttggtcaatttcaaggactaaag 22017997  T
Q  222 tgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggacta 282  Q
    ||| |||| |||| |||||||| ||||||||| |||||||  | ||| |||||||||||||    
T  22017998 tgattaacggagtatacattcagagactaaatagactaacatagtctacattcagggacta 22018058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 182 - 365
Target Start/End: Complemental strand, 18500801 - 18500619
Alignment:
Q  182 cttgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggact 281  Q
    ||||||| |||||  |||||||||||||||| ||||||||||| |||||||||||| |||||  |||||||||||||||| || ||| |||||||||| |    
T  18500801 cttgaatgtagatactgttggtcaatttcagagactaaagtgattaacagagtctaaattcagggactaaattgactaacagagtctacattcagggatt 18500702  T
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctatt 365  Q
    |||||  |||| | ||| |||||| |   | |||||| |||| |||||| ||||   ||||||| |||||||| ||||||||||    
T  18500701 aaattggctaatatagtttacatttaaaaattatttttcaatctatttgtattctgagactaaaatgacgact-ctttcctatt 18500619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 246 - 372
Target Start/End: Original strand, 22017990 - 22018116
Alignment:
Q  246 gactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaa 345  Q
    ||||||| ||| ||||||| | | ||||||| ||||||||  ||||||| |||||||||||||||||||||||||||||||| || |||||  ||| |||    
T  22017990 gactaaagtgattaacggagtatacattcagagactaaatagactaacatagtctacattcagggactattttgcaatttatctgcattcagagacgaaa 22018089  T
Q  346 gtgacgactcctttcctattcagggac 372  Q
     ||||||||| ||||||||| ||||||    
T  22018090 atgacgactcatttcctatttagggac 22018116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 225
Target Start/End: Original strand, 47463808 - 47463933
Alignment:
Q  96 tgggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagatt 195  Q
    ||||||||||||||||||||| |    |||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||     |||||| |||| |    
T  47463808 tgggaaattagtcactttagtccctggatgggaaatgagtagtcactttagtccctgaatgcagataaattgcaaaacagtct----ttgaatgtagact 47463903  T
Q  196 ttgttggtcaatttcagggactaaagtgac 225  Q
     ||||| | |||||||||||||||||||||    
T  47463904 ctgttgataaatttcagggactaaagtgac 47463933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 314
Target Start/End: Original strand, 1387299 - 1387486
Alignment:
Q  122 aatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaag 221  Q
    |||| |||| ||||| ||| |||||||| |||||||||| ||||| |||| || ||    ||||||| || |||| ||| |||||| | |||||||||||    
T  1387299 aatgagaaaagagtagtcattttagtccatgaatgcagagaaattacaaagcagtc----cttgaatgtatattt-gttagtcaatattagggactaaag 1387393  T
Q  222 tgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggacta 314  Q
    ||||||||  |||||||||||    |||||||||||||||||  | |||||||||| |||||| | ||||||| ||||||||||||| |||||    
T  1387394 tgactaacgaagtctacattccggaactaaattgactaacggggtttgcattcaggaactaaagtgactaacaaagtctacattcagcgacta 1387486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 47144879 - 47144760
Alignment:
Q  195 tttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaaca 294  Q
    |||||| |||||||||| ||||||||||||| ||| |||||| ||||||   |||||||||| ||||||| |||  ||||| |||||||||| ||||||     
T  47144879 tttgttagtcaatttcaaggactaaagtgaccaacggagtctgcattcaggaactaaattgattaacggagtctttattcaaggactaaattgactaact 47144780  T
Q  295 gagtctacattcagggacta 314  Q
    ||||||||||||||| ||||    
T  47144779 gagtctacattcaggaacta 47144760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 101 - 275
Target Start/End: Original strand, 12140666 - 12140836
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||||||||||| | ||  |||| ||||| |||  |||||||| ||| |||||||| | ||||||||||||| ||    | | ||| |||| ||||||    
T  12140666 aattagtcactttaatccttaaatgagaaataagtcgtcactttaatccttgaatgcaaagaaattgcaaaacagtc----cctaaatatagactttgtt 12140761  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattca 275  Q
      ||||||| |||||||||| ||||||||| | ||||||||||  ||||||||||||||||||| ||| ||||||    
T  12140762 aatcaattttagggactaaaatgactaacaaattctacattcaaggactaaattgactaacggagtctacattca 12140836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 247 - 367
Target Start/End: Complemental strand, 29909027 - 29908907
Alignment:
Q  247 actaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaag 346  Q
    |||||| ||| ||| ||| ||| ||||||  ||||||||| |||||| |||||| |||||| | ||||||||||||||||| || || ||  ||||||||    
T  29909027 actaaagtgaataatggactctacattcaacgactaaattgactaacggagtctgcattcatgaactattttgcaatttatctgcatccagtgactaaag 29908928  T
Q  347 tgacgactcctttcctattca 367  Q
    ||||||||| |||||||||||    
T  29908927 tgacgactcatttcctattca 29908907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 282 - 371
Target Start/End: Complemental strand, 22017985 - 22017896
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcaggga 371  Q
    ||||| || |||||| | |||||||||||||| ||||||||||| | || ||||| ||||||||||||| |||||||||| |||||||||    
T  22017985 aaattgaccaacagaatatacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactcctttcccattcaggga 22017896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 3391255 - 3391170
Alignment:
Q  133 agtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaagt 222  Q
    |||| ||||||||||| ||||||||||| |||||||||||||||||    |||||| |||| |||||| |||||||||| ||||||||||    
T  3391255 agtagtcactttagtctctgaatgcagagaaattgcaaaacaatca----ttgaatgtagactttgttagtcaatttcaaggactaaagt 3391170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 247 - 365
Target Start/End: Original strand, 8951129 - 8951247
Alignment:
Q  247 actaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaag 346  Q
    |||||| ||||||||| | ||| |||| ||| |||||||| ||||||| | |||||||||||| |||||||| | |||||| |  ||||| | ||||| |    
T  8951129 actaaaatgactaacgaagtctacattaaggaactaaattgactaacaaaatctacattcaggaactattttaccatttatctatattcaggaactaatg 8951228  T
Q  347 tgacgactcctttcctatt 365  Q
    |||||| ||||||||||||    
T  8951229 tgacgattcctttcctatt 8951247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 372
Target Start/End: Complemental strand, 47463908 - 47463827
Alignment:
Q  291 aacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||||||||||||||||  |||| ||||||||||||| || ||||| ||||||||||||| |||| ||||| || |||||||    
T  47463908 aacagagtctacattcaaagactgttttgcaatttatctgcattcagggactaaagtgactactcatttcccatccagggac 47463827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 275
Target Start/End: Complemental strand, 29909039 - 29908967
Alignment:
Q  203 tcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattca 275  Q
    ||||||||||| |||||||||| |||  || ||||||||||  ||||||||||||||||||| ||||||||||    
T  29909039 tcaatttcaggaactaaagtgaataatggactctacattcaacgactaaattgactaacggagtctgcattca 29908967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 282 - 372
Target Start/End: Original strand, 2063322 - 2063412
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||| || |||||||||||||||||||||||  |||||||||| | || | ||||||| ||||||||| |||| ||||| ||||| ||||    
T  2063322 aaattgaccaacagagtctacattcagggactgctttgcaatttctctgcaatcaaggattaaagtgactactcatttcccattcaaggac 2063412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 55382577 - 55382647
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaa 171  Q
    ||||||||| |||||| ||  ||||| ||||||||| |||||||||||| |||||||||| ||||||||||    
T  55382577 aattagtcattttagttcttgaatggaaaatgagtagtcactttagtccgtgaatgcagagaaattgcaaa 55382647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 55382835 - 55382765
Alignment:
Q  102 attagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaa 172  Q
    ||||||||||||||| ||  ||| ||||||||||  |||||||| |||||||||||||| |||||||||||    
T  55382835 attagtcactttagtccttgaataggaaatgagtcgtcactttaatccctgaatgcagataaattgcaaaa 55382765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 350
Target Start/End: Original strand, 5448372 - 5448440
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgac 350  Q
    ||||| || |||||||| |||||||||||||| ||||||||||| | || ||||| |||||||||||||    
T  5448372 aaattgaccaacagagtttacattcagggactgttttgcaatttctctgcattcagggactaaagtgac 5448440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 354
Target Start/End: Complemental strand, 12140762 - 12140698
Alignment:
Q  290 taacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgact 354  Q
    ||||| |||||| ||| ||||||| ||||||||||| |||| ||||||||| |||||||||||||    
T  12140762 taacaaagtctatatttagggactgttttgcaatttctttgcattcaaggattaaagtgacgact 12140698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 281 - 356
Target Start/End: Complemental strand, 37695004 - 37694929
Alignment:
Q  281 taaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcc 356  Q
    |||||| || |||| | |||||||||||||||| ||||||||||| | || ||||| ||||||||||||| |||||    
T  37695004 taaattgaccaacacaatctacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactcc 37694929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 372
Target Start/End: Complemental strand, 18830677 - 18830588
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||| || |||||| |||||||||||||||| ||| ||||||||| || | || |||||||||||||| |||| ||||  ||||||||||    
T  18830677 aaattgaccaacagaatctacattcagggactgtttagcaatttatctgca-tccaggactaaagtgactactcatttctcattcagggac 18830588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 172
Target Start/End: Complemental strand, 18836522 - 18836488
Alignment:
Q  138 tcactttagtccctgaatgcagaaaaattgcaaaa 172  Q
    |||||||||||||||||||||||||||||||||||    
T  18836522 tcactttagtccctgaatgcagaaaaattgcaaaa 18836488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 282
Target Start/End: Original strand, 8951058 - 8951196
Alignment:
Q  140 actttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtctaca 239  Q
    ||||||||||||||||| | | ||||||||||||| ||     |||||| |||| |  |||||||||||| ||  |||||| ||||||||  ||||||||    
T  8951058 actttagtccctgaatgtaaagaaattgcaaaacagtct----ttgaatgtagactcagttggtcaatttaagaaactaaaatgactaacgaagtctaca 8951153  T
Q  240 ttcatagactaaattgactaacggaatctgcattcagggacta 282  Q
    || |   |||||||||||||||  ||||| |||||||| ||||    
T  8951154 ttaaggaactaaattgactaacaaaatctacattcaggaacta 8951196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 372
Target Start/End: Complemental strand, 10757664 - 10757583
Alignment:
Q  291 aacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||| ||||||||| || ||||| ||||||||||||| |  ||||| ||||||||||||| |||| ||||  ||||||||||    
T  10757664 aacatagtctacatccatggactgttttgcaatttatctacattcagggactaaagtgactactcatttctcattcagggac 10757583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 372
Target Start/End: Complemental strand, 10970835 - 10970754
Alignment:
Q  291 aacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||| ||||||||| || ||||| ||||||||||||| |  ||||| ||||||||||||| |||| ||||  ||||||||||    
T  10970835 aacatagtctacatccatggactgttttgcaatttatctacattcagggactaaagtgactactcatttctcattcagggac 10970754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 55382661 - 55382730
Alignment:
Q  243 atagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggac 312  Q
    |||||||||| ||||||||||| ||| ||| ||||||||||||| |||||| || ||| |||| ||||||    
T  55382661 atagactaaagtgactaacggagtctacatccagggactaaattgactaacggaatctgcatttagggac 55382730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 10757702 - 10757746
Alignment:
Q  270 cattcagggactaaattaactaacagagtctacattcagggacta 314  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||    
T  10757702 cattcagggactaaattgactaacggagtctgcattcagggacta 10757746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 10970873 - 10970917
Alignment:
Q  270 cattcagggactaaattaactaacagagtctacattcagggacta 314  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||    
T  10970873 cattcagggactaaattgactaacggagtctgcattcagggacta 10970917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 9826808 - 9826895
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagg 369  Q
    ||||| ||||||||||||||| |||| | ||| ||||||||||| | || ||||||| ||| ||||||| |||| ||||  |||||||    
T  9826808 aaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattcaagtacttaagtgactactcttttctgattcagg 9826895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 37695187 - 37695136
Alignment:
Q  126 ggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatc 177  Q
    ||||||||||  |||||||||||| |||||||||| ||||||||||| ||||    
T  37695187 ggaaatgagtcatcactttagtccttgaatgcagataaattgcaaaataatc 37695136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 172
Target Start/End: Complemental strand, 18830817 - 18830783
Alignment:
Q  138 tcactttagtccctgaatgcagaaaaattgcaaaa 172  Q
    ||||||||||||||||||||||| |||||||||||    
T  18830817 tcactttagtccctgaatgcagataaattgcaaaa 18830783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 241
Target Start/End: Complemental strand, 3370078 - 3370045
Alignment:
Q  208 ttcagggactaaagtgactaacagagtctacatt 241  Q
    ||||||||||||| ||||||||||||||||||||    
T  3370078 ttcagggactaaattgactaacagagtctacatt 3370045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 12140775 - 12140836
Alignment:
Q  246 gactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattca 307  Q
    ||||||| ||||||||  | ||| |||||| |||||||||| |||||| |||||||||||||    
T  12140775 gactaaaatgactaacaaattctacattcaaggactaaattgactaacggagtctacattca 12140836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 373
Target Start/End: Complemental strand, 18836363 - 18836292
Alignment:
Q  301 acattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggaca 373  Q
    ||||| ||||||| ||||| ||||||| || ||||| ||||||||||||| |||| ||||  |||||||||||    
T  18836363 acatttagggactgttttg-aatttatctgcattcagggactaaagtgactactcatttctcattcagggaca 18836292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 208 - 284
Target Start/End: Complemental strand, 47144834 - 47144758
Alignment:
Q  208 ttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaa 284  Q
    |||||| |||||| ||| |||| ||||||  |||||  |||||||||||||||| || ||| |||||||| ||||||    
T  47144834 ttcaggaactaaattgattaacggagtctttattcaaggactaaattgactaactgagtctacattcaggaactaaa 47144758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 369
Target Start/End: Original strand, 47463916 - 47463952
Alignment:
Q  333 ttcaaggactaaagtgacgactcctttcctattcagg 369  Q
    |||| |||||||||||||||||| |||||||||||||    
T  47463916 ttcagggactaaagtgacgactcatttcctattcagg 47463952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 2e-74; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 138 - 372
Target Start/End: Complemental strand, 48755571 - 48755340
Alignment:
Q  138 tcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaagtgactaaca-gagtct 236  Q
    ||||||||||||||||||||||| ||||||||||||| |   |||| |||| |||| | ||||||||||||||||||   ||||||||||||| ||||||    
T  48755571 tcactttagtccctgaatgcagagaaattgcaaaacagt---tcct-gaatgtagactctgttggtcaatttcaggggtcaaagtgactaacacgagtct 48755476  T
Q  237 acattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattca 336  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| || |||||    
T  48755475 acattcatggactaaattgactaacggagtctgcattcagggactaaattgactaacagagtctacattcagggactattttgcaacttatctgcattca 48755376  T
Q  337 aggactaaagtgacgactcctttcctattcagggac 372  Q
      ||||||||||||||||||||||||||||||||||    
T  48755375 gagactaaagtgacgactcctttcctattcagggac 48755340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 96 - 359
Target Start/End: Complemental strand, 21515029 - 21514770
Alignment:
Q  96 tgggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagatt 195  Q
    |||| ||||||||||||| || |   ||| ||||||||||| ||| |||||||| |||||| ||| ||||| ||||||| ||    | ||||| |||| |    
T  21515029 tggggaattagtcacttttgtccctgaattggaaatgagtagtcattttagtccttgaatgtagataaatttcaaaacagtc----cctgaatgtagact 21514934  T
Q  196 ttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacag 295  Q
     | ||||||||||||| ||| |||||| |||||||||||| |||||||  ||||||||||||||||| | || |||||||||||||||||||||||||||    
T  21514933 atattggtcaatttcatggattaaagtaactaacagagtccacattcaaggactaaattgactaacgaagtccgcattcagggactaaattaactaacag 21514834  T
Q  296 agtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactccttt 359  Q
    |||||||||||| |||||||||| |||||||| || ||||| ||||||||||||||||| ||||    
T  21514833 agtctacattcaaggactattttacaatttatctgtattcagggactaaagtgacgacttcttt 21514770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 208 - 372
Target Start/End: Complemental strand, 15031365 - 15031201
Alignment:
Q  208 ttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattca 307  Q
    ||||| ||||||| |||||||| |||||||||||||  ||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||    
T  15031365 ttcagtgactaaattgactaacggagtctacattcagtgactaaattgactaacggagtttgcattcagggactaaattgactaacagagtctacattca 15031266  T
Q  308 gggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||||||||| |||||||| || |||||||||||||||||||||||| ||||| ||||| ||||    
T  15031265 gggactattttacaatttatctgcattcaaggactaaagtgacgactcttttcccattcaaggac 15031201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 101 - 314
Target Start/End: Complemental strand, 15031500 - 15031291
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||||||||||||| |   ||||||||||||||| ||||||||||| ||||||||||| ||||||||||||| ||    | | ||| |||| ||||||    
T  15031500 aattagtcactttagtccctgaatgggaaatgagtagtcactttagtctctgaatgcagagaaattgcaaaacagtc----cctaaatctagactttgtt 15031405  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
    ||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||| ||| ||||||| ||||||||| |||||| |||| |    
T  15031404 ggtcaatttcagggactaaagtgactaacggagtctacattcagtgactaaattgactaacggagtctacattcagtgactaaattgactaacggagttt 15031305  T
Q  301 acattcagggacta 314  Q
     |||||||||||||    
T  15031304 gcattcagggacta 15031291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 101 - 372
Target Start/End: Complemental strand, 33343284 - 33343019
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||||||||||| | |   |||||||||||||||  || ||||||  ||||||||||| ||||||||||||| ||    ||||||| || | | ||||    
T  33343284 aattagtcactttaatccctgaatgggaaatgagtagacattttagttactgaatgcagagaaattgcaaaacagtc----cttgaatataaactctgtt 33343189  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
    ||||||||||||| |||||| ||| ||||| ||||||||||||  ||||||||||||||||  | | |||||||||||||||| || ||||||| |||||    
T  33343188 ggtcaatttcaggaactaaa-tgattaacaaagtctacattcagggactaaattgactaacatagtttgcattcagggactaa-ttgactaacatagtct 33343091  T
Q  301 acattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||||||||||| |||| ||||||||| || ||||| |||||||||||||||||| ||| ||||||||||||    
T  33343090 acattcagggaccatttagcaatttatctgcattcagggactaaagtgacgactcattttctattcagggac 33343019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 138 - 365
Target Start/End: Complemental strand, 44968097 - 44967875
Alignment:
Q  138 tcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtcta 237  Q
    |||||||||||| |||||| ||| ||||||||||||| ||    | | ||| |||| ||||||||||||||||||||| |||||||||||| ||||||||    
T  44968097 tcactttagtcc-tgaatgtagataaattgcaaaacagtc----cctaaatgtagactttgttggtcaatttcagggattaaagtgactaagagagtcta 44968003  T
Q  238 cattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaa 337  Q
    |||||| |||||||||||||||| ||  |||| ||| || ||||||||| ||||||||||||||||||||   ||||||||||||| |||||| |||||     
T  44968002 cattcaaagactaaattgactaatggggtctgtattgagagactaaattgactaacagagtctacattcaaaaactattttgcaatatatttgcattcag 44967903  T
Q  338 ggactaaagtgacgactcctttcctatt 365  Q
    ||||||||||||| |||| ||| |||||    
T  44967902 ggactaaagtgacaactcattttctatt 44967875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 122 - 320
Target Start/End: Original strand, 14434660 - 14434854
Alignment:
Q  122 aatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaag 221  Q
    |||||||||||| || |||||||||||| | |||||||| | ||||||||||| ||    ||||||| |||| |||||| || |||||||||||||||||    
T  14434660 aatgggaaatgaatagtcactttagtccgtaaatgcagagatattgcaaaacagtc----cttgaatgtagactttgttagttaatttcagggactaaag 14434755  T
Q  222 tgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgc 320  Q
    |||||| | ||||||||||||| |||||||||| |||| | || | ||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  14434756 tgactagcggagtctacattcagagactaaattaactatctgagtttgcattcagggactaaattgactaacagagtctacattcatggactattttgc 14434854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 142 - 368
Target Start/End: Complemental strand, 1426714 - 1426501
Alignment:
Q  142 tttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtctacatt 241  Q
    |||| |||||||||||||| ||||||||||||| ||| |    |||| |||| ||||||||||||||||||         |||||||| |||||||||||    
T  1426714 tttaatccctgaatgcagagaaattgcaaaacagtcact----gaatgtagactttgttggtcaatttcag---------tgactaacggagtctacatt 1426628  T
Q  242 catagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggac 341  Q
     |  ||||||||||||||||||| ||||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||||||| || ||||| |  |    
T  1426627 tagggactaaattgactaacggagtctgcattcagggactaaattgactaacataatctacattcaggaactattttgcaatttatctgcattcaggatc 1426528  T
Q  342 taaagtgacgactcctttcctattcag 368  Q
    |||||||||||||| ||||||||||||    
T  1426527 taaagtgacgactcatttcctattcag 1426501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 133 - 327
Target Start/End: Original strand, 11989076 - 11989266
Alignment:
Q  133 agtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaagtgactaacaga 232  Q
    |||| ||||||||||| ||||||||||| ||||||||||||| ||    | ||||| |||| | |||||||||||||||| |||||||||| ||||| ||    
T  11989076 agtagtcactttagtctctgaatgcagagaaattgcaaaacagtc----cctgaatatagactctgttggtcaatttcagagactaaagtggctaacgga 11989171  T
Q  233 gtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttat 327  Q
    ||||||||| |  ||||||||||| ||||||| ||||||||||||||||| ||| ||||||||||||||||   || ||||||||||||||||||    
T  11989172 gtctacatttaaggactaaattgattaacggagtctgcattcagggactagattgactaacagagtctacaactagagactattttgcaatttat 11989266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 101 - 318
Target Start/End: Complemental strand, 15005238 - 15005025
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||||||||||| | ||  |||||| ||||| |  ||||||||||| ||||||||||| ||||||||||||| |   ||  ||||| |||| | |||     
T  15005238 aattagtcactttaatccttgaatgggtaatgactggtcactttagtctctgaatgcagagaaattgcaaaacagtt--tc--tgaatgtagactctgtc 15005143  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
    ||||||||||||||| | |||||||||||| ||| ||||||||  ||||||||| |||||| || |||||||||||||| |||||| |||||||||||||    
T  15005142 ggtcaatttcagggatttaagtgactaacaaagtatacattcaaggactaaattaactaactgagtctgcattcagggattaaattgactaacagagtct 15005043  T
Q  301 acattcagggactatttt 318  Q
    ||||||| ||||||||||    
T  15005042 acattcaaggactatttt 15005025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 98 - 282
Target Start/End: Original strand, 26498544 - 26498724
Alignment:
Q  98 ggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagatttt 197  Q
    ||||||||||||||||||| |   ||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| ||    | ||||| ||||   |    
T  26498544 ggaaattagtcactttagtccctgaatgggaaaagagtagtcactttagtccctgaatgcagagaaattgcaaaacagtc----cctgaatgtagaccat 26498639  T
Q  198 gttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggacta 282  Q
    |||||||||||||||||||||||||||||||| |||| | ||||||  |||||||||||||||| || ||| |||||| ||||||    
T  26498640 gttggtcaatttcagggactaaagtgactaacggagtatgcattcagtgactaaattgactaaccgagtctacattcatggacta 26498724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 140 - 347
Target Start/End: Complemental strand, 26920396 - 26920193
Alignment:
Q  140 actttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtctaca 239  Q
    |||||||||  |||||||||||||||||||||||| |     ||||||| || | ||||||| ||||||||||||| ||||||||||||  ||| |||||    
T  26920396 actttagtctatgaatgcagaaaaattgcaaaacagtt----cttgaatgtatactttgttgatcaatttcagggattaaagtgactaatggagcctaca 26920301  T
Q  240 ttcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaagg 339  Q
    || |  ||||||||||||||||| | | | |||| ||| |||||||||||||| |||||||| ||| || ||||||||||||||||||||  ||||| ||    
T  26920300 tttaaggactaaattgactaacgaagtatacattgaggaactaaattaactaatagagtctatatttagagactattttgcaatttatttagattcatgg 26920201  T
Q  340 actaaagt 347  Q
    ||||||||    
T  26920200 actaaagt 26920193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 246 - 368
Target Start/End: Original strand, 26498656 - 26498778
Alignment:
Q  246 gactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaa 345  Q
    ||||||| ||||||||||| | ||||||||| ||||||||| |||||| ||||||||||||| ||||||||||||||||||| || ||||| ||||||||    
T  26498656 gactaaagtgactaacggagtatgcattcagtgactaaattgactaaccgagtctacattcatggactattttgcaatttatctgcattcagggactaaa 26498755  T
Q  346 gtgacgactcctttcctattcag 368  Q
    |||| ||||| ||||||||||||    
T  26498756 gtgatgactcatttcctattcag 26498778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 102 - 372
Target Start/End: Original strand, 18445405 - 18445671
Alignment:
Q  102 attagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttg 201  Q
    ||||||||||||||| |   |||  |||| ||||| |||||| ||| | |||||||||| ||||||||||||| |     ||||||  |||| | ||||     
T  18445405 attagtcactttagttcctgaatcagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtg----cttgaacgtagactctgtta 18445500  T
Q  202 gtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtcta 301  Q
    |||||||||| ||| ||| ||||||||| ||||||| ||||   || |||||||| ||||| | |||||||||||  ||||| || ||||||| ||| ||    
T  18445501 gtcaatttcaaggattaatgtgactaactgagtctaaattctgggattaaattgattaacgaagtctgcattcagatactaagttgactaacatagtata 18445600  T
Q  302 cattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||||||  ||||||||||||||||| || ||||| ||||||||||||  | | |||||||||||||||||    
T  18445601 cattcagaaactattttgcaatttatctgcattcatggactaaagtgataatttctttcctattcagggac 18445671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 279 - 367
Target Start/End: Complemental strand, 42453149 - 42453061
Alignment:
Q  279 actaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattca 367  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||  ||||||||||||||||| ||| |||||||    
T  42453149 actaaattgactaacagagtctacatttagggactattttgcaatttatttgcattcatagactaaagtgacgactcattttctattca 42453061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 101 - 261
Target Start/End: Complemental strand, 38498383 - 38498227
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||||||||||| | |   |||| |||| ||||| ||||||||||||||||||||| | ||||||||||| | ||  ||  ||||| |||| ||||||    
T  38498383 aattagtcactttaatccctgaatgagaaaggagtagtcactttagtccctgaatgcatagaaattgcaaaatagtc--tc--tgaatgtagactttgtt 38498288  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaac 261  Q
     || ||||| |||||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  38498287 agttaattttagggactaaagtgactaatagagtctacattcagggactaaattgactaac 38498227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 202 - 372
Target Start/End: Original strand, 43562696 - 43562866
Alignment:
Q  202 gtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtcta 301  Q
    |||||||| || ||||||||||||||||   |||||||||||  || |||||||||||| | | ||||||||||  || |||||| || |||||| ||||    
T  43562696 gtcaattttagagactaaagtgactaacgatgtctacattcagggattaaattgactaatgaagtctgcattcaacgattaaattgacaaacagaatcta 43562795  T
Q  302 cattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||||| |||||||||| |||||||| || |||||   |||||| |||||| || ||||||||| ||||||    
T  43562796 cattcaaggactattttacaatttatctgcattcagaaactaaaatgacgaatcatttcctattgagggac 43562866  T

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Target: chr3; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 273 - 368
Target Start/End: Complemental strand, 20759071 - 20758976
Alignment:
Q  273 tcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcag 368  Q
    |||||||||||||| ||||| |||||||| |||||| ||||||||| |||||||| || |||||||||||||||||||||||  |||| |||||||    
T  20759071 tcagggactaaattgactaatagagtctatattcagagactattttacaatttatctgtattcaaggactaaagtgacgacttatttcatattcag 20758976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 122 - 260
Target Start/End: Complemental strand, 20759186 - 20759052
Alignment:
Q  122 aatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaag 221  Q
    |||| |||| ||||| ||| |||||||| |||||||||| ||||||||||| | ||    ||||||| |||| |||||| ||||||||||||||||||||    
T  20759186 aatgagaaaggagtagtcattttagtccttgaatgcagagaaattgcaaaatagtc----cttgaatgtagactttgttagtcaatttcagggactaaag 20759091  T
Q  222 tgactaacagagtctacattcatagactaaattgactaa 260  Q
    ||||||||| ||||||   |||  |||||||||||||||    
T  20759090 tgactaacatagtctattctcagggactaaattgactaa 20759052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 282 - 371
Target Start/End: Original strand, 38498279 - 38498368
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcaggga 371  Q
    ||||||||||||| ||||||||||||| |||||||||||||||| | || ||||| ||||||||||||| |||||||||  |||||||||    
T  38498279 aaattaactaacaaagtctacattcagagactattttgcaatttctatgcattcagggactaaagtgactactcctttctcattcaggga 38498368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 282 - 372
Target Start/End: Original strand, 20759103 - 20759193
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||| ||||||| |||||||||||| ||||||||||||||||| | || |||||||||||||| |||| |||||||||  ||||||||||    
T  20759103 aaattgactaacaaagtctacattcaaggactattttgcaatttctctgcattcaaggactaaaatgactactcctttctcattcagggac 20759193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 246 - 368
Target Start/End: Complemental strand, 38498274 - 38498152
Alignment:
Q  246 gactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaa 345  Q
    ||||||| |||||||  || ||| ||||||||||||||||| ||||||| ||| || ||| | ||||||||||||||||||| || ||||| ||||||||    
T  38498274 gactaaagtgactaatagagtctacattcagggactaaattgactaacaaagtttatatttatggactattttgcaatttatctgcattcagggactaaa 38498175  T
Q  346 gtgacgactcctttcctattcag 368  Q
    ||||  |||| ||| ||||||||    
T  38498174 gtgatcactcattttctattcag 38498152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 197 - 294
Target Start/End: Complemental strand, 36383186 - 36383089
Alignment:
Q  197 tgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaaca 294  Q
    |||| |||||||| |||||||||||||||||||  |||||| ||||| ||||||||||||| |||  | |||||||||| ||| |||||| |||||||    
T  36383186 tgttagtcaattttagggactaaagtgactaacgaagtctatattcagagactaaattgaccaacaaagtctgcattcaaggattaaattgactaaca 36383089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 39541771 - 39541691
Alignment:
Q  288 actaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcag 368  Q
    ||||||| | |||| |||||||||||| |||||||||||| || |||||  ||||||||||||||||| ||||||||||||    
T  39541771 actaacataatctatattcagggactactttgcaatttatctgcattcagagactaaagtgacgactcatttcctattcag 39541691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 26498636 - 26498561
Alignment:
Q  297 gtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||||||||||||||| ||||||||||| | || ||||| ||||||||||||| |||| ||||| ||||||||||    
T  26498636 gtctacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactcttttcccattcagggac 26498561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 246 - 368
Target Start/End: Original strand, 7300159 - 7300280
Alignment:
Q  246 gactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaa 345  Q
    ||||||| |||||||| || |||||||| ||||| |||||| ||||||||| |||||| |   | ||||||||| ||||||| || || | |||||||||    
T  7300159 gactaaagtgactaacagagtctgcatttagggattaaattgactaacagaatctacaatttcgtactattttgtaatttatgtgcat-cgaggactaaa 7300257  T
Q  346 gtgacgactcctttcctattcag 368  Q
     | ||||||||||||||||||||    
T  7300258 ataacgactcctttcctattcag 7300280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 373
Target Start/End: Original strand, 21514934 - 21515011
Alignment:
Q  296 agtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggaca 373  Q
    |||||||||||||||||| ||||| ||||||| |  |||||||||||||| |||| |||| ||||| |||||||||||    
T  21514934 agtctacattcagggactgttttgaaatttatctacattcaaggactaaaatgactactcatttccaattcagggaca 21515011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 268
Target Start/End: Original strand, 7300137 - 7300213
Alignment:
Q  192 gattttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatct 268  Q
    |||| |||||||||| |||| |||||||||||||||||||||||| |||| |  || ||||||||||||| ||||||    
T  7300137 gattctgttggtcaaattcaaggactaaagtgactaacagagtctgcatttagggattaaattgactaacagaatct 7300213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 373
Target Start/End: Complemental strand, 11989148 - 11989057
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggaca 373  Q
    ||||| || ||||||||||| ||||||||||| ||||||||||| | || |||||  |||||||||||| ||| ||||||  ||||||||||    
T  11989148 aaattgaccaacagagtctatattcagggactgttttgcaatttctctgcattcagagactaaagtgactacttctttccctttcagggaca 11989057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 199 - 327
Target Start/End: Complemental strand, 26840174 - 26840049
Alignment:
Q  199 ttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagt 298  Q
    ||||| |||| || ||| |||||||||||||||||| || |||||  ||||||||| ||||||||| ||| || | |  ||||||||| |||   |||||    
T  26840174 ttggttaattccatggattaaagtgactaacagagtttatattcaaggactaaattaactaacggagtcttcaattaaagactaaattgact---agagt 26840078  T
Q  299 ctacattcagggactattttgcaatttat 327  Q
    |||||||||  |||||||||| |||||||    
T  26840077 ctacattcaaagactattttgtaatttat 26840049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 282 - 368
Target Start/End: Original strand, 39541786 - 39541872
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcag 368  Q
    ||||| || |||||||||||||||||| |||| |||| |||||| | || ||||| ||||||||||||| ||| |||| ||||||||    
T  39541786 aaattgaccaacagagtctacattcagagactgttttacaatttctctgcattcagggactaaagtgactacttcttttctattcag 39541872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 243
Target Start/End: Complemental strand, 39541858 - 39541752
Alignment:
Q  133 agtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaagtgactaacaga 232  Q
    |||| ||||||||||||||||||||||| |||||| |||||| ||  ||  ||||| |||| | ||||||||||||| | |||| ||||||||||||| |    
T  39541858 agtagtcactttagtccctgaatgcagagaaattgtaaaacagtc--tc--tgaatgtagactctgttggtcaattttaaggacaaaagtgactaacata 39541763  T
Q  233 gtctacattca 243  Q
     |||| |||||    
T  39541762 atctatattca 39541752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 350
Target Start/End: Original strand, 48755504 - 48755572
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgac 350  Q
    ||||| || ||||||||||||||||||| ||| ||||||||||| | || ||||| |||||||||||||    
T  48755504 aaattgaccaacagagtctacattcaggaactgttttgcaatttctctgcattcagggactaaagtgac 48755572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 369
Target Start/End: Complemental strand, 41985008 - 41984921
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagg 369  Q
    ||||| ||||||||||||||| |||| | ||| ||||||||||| | || ||||||| ||| ||||||| |||| |||| ||||||||    
T  41985008 aaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattcaagtacttaagtgactactcttttcttattcagg 41984921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 372
Target Start/End: Original strand, 15031396 - 15031486
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||| || |||| |||||| ||| ||||||| ||||||||||| | || |||||  |||||||||||| |||| ||||| ||||||||||    
T  15031396 aaattgaccaacaaagtctagatttagggactgttttgcaatttctctgcattcagagactaaagtgactactcatttcccattcagggac 15031486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 26498771 - 26498725
Alignment:
Q  126 ggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaa 172  Q
    ||||||||||  ||||||||||||||||||||||| |||||||||||    
T  26498771 ggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaa 26498725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 367
Target Start/End: Complemental strand, 14434743 - 14434658
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattca 367  Q
    ||||||||||||| |||||||||||| ||||| ||||||||| | | || ||| | ||||||||||||| | || ||||| |||||    
T  14434743 aaattaactaacaaagtctacattcaaggactgttttgcaatatctctgcatttacggactaaagtgactattcatttcccattca 14434658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 15031182 - 15031258
Alignment:
Q  96 tgggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaa 172  Q
    ||||| ||||| ||||||||| ||  ||||||||| ||||  |||||||||||| |||||||||| |||||| ||||    
T  15031182 tgggagattagccactttagtccttgaatgggaaaagagtcgtcactttagtccttgaatgcagataaattgtaaaa 15031258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 33343000 - 33343072
Alignment:
Q  96 tgggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgc 168  Q
    ||||| ||||||||||||||| |   ||| | ||||||||  ||||||||||||||||||||||| |||||||    
T  33343000 tgggagattagtcactttagtccctgaatagaaaatgagtcgtcactttagtccctgaatgcagataaattgc 33343072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 38498161 - 38498205
Alignment:
Q  128 aaatgagtactcactttagtccctgaatgcagaaaaattgcaaaa 172  Q
    ||||||||  ||||||||||||||||||||||| |||||||||||    
T  38498161 aaatgagtgatcactttagtccctgaatgcagataaattgcaaaa 38498205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 369
Target Start/End: Complemental strand, 18445508 - 18445421
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagg 369  Q
    ||||| ||||||||||||||| |||| | ||| ||||||||||| | || ||||||| ||| ||||||| |||| ||||  |||||||    
T  18445508 aaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattcaagtacttaagtgactactcttttctgattcagg 18445421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 33412288 - 33412222
Alignment:
Q  301 acattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattca 367  Q
    ||||||| |||||||||| |||||||| || |||| | || ||||||||||| || |||||||||||    
T  33412288 acattcaaggactattttacaatttatctgcattcgaagattaaagtgacgattcatttcctattca 33412222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 39541698 - 39541743
Alignment:
Q  126 ggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaa 171  Q
    ||||||||||  ||||||||||| ||||||||||| ||||||||||    
T  39541698 ggaaatgagtcgtcactttagtctctgaatgcagataaattgcaaa 39541743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 350
Target Start/End: Original strand, 44968031 - 44968098
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgac 350  Q
    ||||| || |||| |||||||||| ||||||| ||||||||||||| |  |||| ||||||||||||||    
T  44968031 aaattgaccaacaaagtctacatttagggactgttttgcaatttatctacattc-aggactaaagtgac 44968098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 140; Significance: 4e-73; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 101 - 372
Target Start/End: Complemental strand, 13536841 - 13536573
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||||||||||||| ||  |||| |||| ||||| ||||||||||| |||||| |||| ||||||||||||| ||    | ||||| |||| | | ||    
T  13536841 aattagtcactttagtccttgaatgagaaaggagtagtcactttagtctctgaatacagagaaattgcaaaacagtc----cctgaatgtagactctatt 13536746  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcataga-ctaaattgactaacggaatctgcattcagggactaaattaactaacagagtc 299  Q
    |||| ||||||||||||||||||||||||||||||||||||||  |  ||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  13536745 ggtccatttcagggactaaagtgactaacagagtctacattcagggggctaaattgactaacggagtctgcattcagggactaaattgactaacagagtc 13536646  T
Q  300 tacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||||||||||||||||||||||||||| || ||||| | | |||||||||| ||||||||||||||||||||    
T  13536645 tacattcagggactattttgcaatttatctgcattcaggcattaaagtgacggctcctttcctattcagggac 13536573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 101 - 368
Target Start/End: Original strand, 19295280 - 19295543
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||||||||||||| ||  ||| ||||| ||||| |||||||||||||||||||| || ||||||||||||| ||    | | ||| |||  | ||||    
T  19295280 aattagtcactttagtccttgaataggaaaggagtagtcactttagtccctgaatgctgagaaattgcaaaacagtc----cctaaatataggctatgtt 19295375  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
     |||||||||||||||||||||||| ||| |||||||||||||  ||||||||||||||| | | ||||||||||||||||||||| |||||||||||||    
T  19295376 agtcaatttcagggactaaagtgaccaacggagtctacattcagggactaaattgactaatgaagtctgcattcagggactaaattgactaacagagtct 19295475  T
Q  301 acattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcag 368  Q
     |||||||||||||||||| ||||||| || ||||| |||||||||| ||||||||||| ||||||||    
T  19295476 gcattcagggactattttgtaatttatctgcattcagggactaaagtaacgactccttttctattcag 19295543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 96 - 372
Target Start/End: Complemental strand, 25089437 - 25089165
Alignment:
Q  96 tgggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagatt 195  Q
    |||| |||||||||||||||| |   |||||  ||||| || ||||||||||| ||||||||||| ||||||||||||| |   |||| |||| |||| |    
T  25089437 tggggaattagtcactttagtccctgaatggacaatgaatagtcactttagtcactgaatgcagagaaattgcaaaacagt---tcct-gaatatagact 25089342  T
Q  196 ttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacag 295  Q
     ||||||||||||||| ||||||||||||||||   ||||||||||||  ||||||||||||||| ||| ||||||||||  ||||||||| ||||||||    
T  25089341 atgttggtcaatttcatggactaaagtgactaatgaagtctacattcagggactaaattgactaatggagtctgcattcaatgactaaattgactaacag 25089242  T
Q  296 agtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||||||||||||||||||||||||||||||| || |||||  |||||||||| |||||||| ||||||||| ||||    
T  25089241 agtctacattcagggactattttgcaatttatctgcattcagagactaaagtggcgactcctctcctattcatggac 25089165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 140 - 359
Target Start/End: Complemental strand, 10862253 - 10862039
Alignment:
Q  140 actttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtctaca 239  Q
    ||||||||||||||||||||| ||||||||||||| |  | |  ||||| |||| ||  ||||||||||||||||||||||||||| ||||||||||| |    
T  10862253 actttagtccctgaatgcagagaaattgcaaaacagt--agc--tgaatgtagactta-ttggtcaatttcagggactaaagtgacgaacagagtctata 10862159  T
Q  240 ttcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaagg 339  Q
    ||||  ||||||||||||||||||| ||||| |||||||| | |||| |||||||||||||||||||||||||||  |||||||| ||||| ||||| ||    
T  10862158 ttcagggactaaattgactaacggagtctgccttcagggattgaattgactaacagagtctacattcagggactacattgcaattaatttgcattcaggg 10862059  T
Q  340 actaaagtgacgactccttt 359  Q
    ||||||||||||||||||||    
T  10862058 actaaagtgacgactccttt 10862039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 96 - 372
Target Start/End: Original strand, 10587881 - 10588137
Alignment:
Q  96 tgggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagatt 195  Q
    |||| |||||||||||||||| |   |||| |||| ||||| ||||||||||||||||||||||| ||||||||||||| ||    | ||||| |||| |    
T  10587881 tggggaattagtcactttagtccatgaatgagaaaggagtagtcactttagtccctgaatgcagagaaattgcaaaacagtc----cctgaatgtagact 10587976  T
Q  196 ttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacag 295  Q
     ||||| |||||||||||||||||||||||||||                 |||||||||||||||||| |||||||||| |||||||||| ||||| |     
T  10587977 atgttgttcaatttcagggactaaagtgactaact----------------actaaattgactaacggagtctgcattcaaggactaaattgactaataa 10588060  T
Q  296 agtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||||||||||| ||||||||||||||||||| || ||||| ||||| ||||||| |||||||||||||||||||||    
T  10588061 agtctacattcatggactattttgcaatttatctgcattcatggacttaagtgacaactcctttcctattcagggac 10588137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 96 - 372
Target Start/End: Original strand, 21222459 - 21222733
Alignment:
Q  96 tgggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagatt 195  Q
    |||| ||||||| |||||||| |   |||| |||| ||||| |||||| ||||| |||||||||| ||||||||||||| ||    ||||||  |||| |    
T  21222459 tggggaattagtaactttagttcctgaatgagaaaagagtagtcacttaagtccttgaatgcagagaaattgcaaaacagtc----cttgaacgtagact 21222554  T
Q  196 ttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacag 295  Q
     |||| |||||||||| ||| ||| ||||||||| |||||||||||||  ||||||||||||||||| | ||||||||||| |||||| || |||||||     
T  21222555 ctgttagtcaatttcaaggattaatgtgactaactgagtctacattcagggactaaattgactaacgaagtctgcattcagagactaagttgactaacat 21222654  T
Q  296 agtctacattcagggactattttgcaattta--tttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||| ||||||||| |||||||||||||||||  | |  ||||| ||||||||||||||| | |||||||||||||||||    
T  21222655 agtatacattcagagactattttgcaatttatctatacattcagggactaaagtgacgatttctttcctattcagggac 21222733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 94 - 314
Target Start/End: Complemental strand, 26705315 - 26705099
Alignment:
Q  94 aatgggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttaga 193  Q
    |||||| |||||||||||||||| |   ||||| ||| ||||| ||||||||||||||||||| ||| ||||||||||||| ||    | ||||| ||||    
T  26705315 aatggggaattagtcactttagttcctgaatggaaaaagagtagtcactttagtccctgaatgtagagaaattgcaaaacagtc----cctgaatgtaga 26705220  T
Q  194 ttttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaac 293  Q
      |||||||||||||||||||||||||||||||||| |  ||||||||||  ||||||||||||||||||| |||  |||||||||||||||| | ||||    
T  26705219 cgttgttggtcaatttcagggactaaagtgactaacgggttctacattcagggactaaattgactaacggattctatattcagggactaaattgattaac 26705120  T
Q  294 agagtctacattcagggacta 314  Q
      | ||| |||||||||||||    
T  26705119 gaaatctgcattcagggacta 26705099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 122 - 368
Target Start/End: Original strand, 10672638 - 10672879
Alignment:
Q  122 aatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaag 221  Q
    |||| |||||||||| |||||||||||   ||||||| |||||||  |||||| ||    | ||||| |||| | ||||||| ||||||||| |||| ||    
T  10672638 aatgagaaatgagtagtcactttagtcttcgaatgcataaaaattataaaacagtc----cctgaatgtagactatgttggtaaatttcaggaactatag 10672733  T
Q  222 tgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgca 321  Q
    ||||||||  ||||||||||||  ||||||||||||||||| ||| ||||||||| ||||||||| | ||||| | |||||||||||| |||||||||||    
T  10672734 tgactaacgaagtctacattcagggactaaattgactaacgaaatatgcattcagagactaaattgattaaca-aatctacattcaggaactattttgca 10672832  T
Q  322 atttatttgaattcaaggactaaagtgacgactcctttcctattcag 368  Q
    |||||| || |||||| ||||||| | |  |||| ||||||||||||    
T  10672833 atttatctgcattcaaagactaaaataataactcatttcctattcag 10672879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 205 - 369
Target Start/End: Original strand, 12651182 - 12651345
Alignment:
Q  205 aatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacat 304  Q
    ||||| || ||||||||||||||||| ||||||||| || ||||||||||||||||| || || |||||||||||| ||||| |||||| ||||||| ||    
T  12651182 aattttagagactaaagtgactaacaaagtctacat-cagagactaaattgactaacagagtcggcattcagggaccaaattgactaacggagtctatat 12651280  T
Q  305 tcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagg 369  Q
    |||  || ||||| ||||||||| || |||||  || |||||||| || || ||||| |||||||    
T  12651281 tcaaagattatttagcaatttatctgcattcacagattaaagtgatgattcatttcccattcagg 12651345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 208 - 292
Target Start/End: Complemental strand, 26705173 - 26705089
Alignment:
Q  208 ttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaa 292  Q
    ||||||||||||| |||||||| || |||| |||||  ||||||||||| ||||| ||||||||||||||||||||||| |||||    
T  26705173 ttcagggactaaattgactaacggattctatattcagggactaaattgattaacgaaatctgcattcagggactaaattgactaa 26705089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 360
Target Start/End: Complemental strand, 10587981 - 10587912
Alignment:
Q  291 aacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttc 360  Q
    |||| |||||||||||||||||| ||||||||||| | || ||||| ||||||||||||| |||||||||    
T  10587981 aacatagtctacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactcctttc 10587912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 350
Target Start/End: Complemental strand, 28752337 - 28752277
Alignment:
Q  290 taacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgac 350  Q
    |||||||||||||||||| ||||||||||||||||||| || ||||| | |||||||||||    
T  28752337 taacagagtctacattcatggactattttgcaatttatctgcattcaggtactaaagtgac 28752277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 369
Target Start/End: Complemental strand, 21222568 - 21222481
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagg 369  Q
    ||||| ||||||||||||||| |||| ||||| ||||||||||| | || ||||||||||| ||||||| |||| ||||  |||||||    
T  21222568 aaattgactaacagagtctacgttcaaggactgttttgcaatttctctgcattcaaggacttaagtgactactcttttctcattcagg 21222481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 13536749 - 13536815
Alignment:
Q  294 agagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttc 360  Q
    |||||||||||||||||||| ||||||||||| | || |||||  |||||||||||| |||||||||    
T  13536749 agagtctacattcagggactgttttgcaatttctctgtattcagagactaaagtgactactcctttc 13536815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 282 - 372
Target Start/End: Complemental strand, 19295384 - 19295294
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||| ||||||| || ||| ||| ||||||| ||||||||||| |  | ||||| ||||||||||||| |||||||||||||||| ||||    
T  19295384 aaattgactaacatagcctatatttagggactgttttgcaatttctcagcattcagggactaaagtgactactcctttcctattcaaggac 19295294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 26705219 - 26705291
Alignment:
Q  297 gtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagg 369  Q
    ||||||||||||||||| ||||||||||| | |  ||||| ||||||||||||| |||| ||| | |||||||    
T  26705219 gtctacattcagggactgttttgcaatttctctacattcagggactaaagtgactactctttttccattcagg 26705291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 371
Target Start/End: Complemental strand, 10672721 - 10672632
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcaggga 371  Q
    ||||| || |||| |||||||||||||||||| ||||  ||||| | || |||| | |||||||||||| |||| ||||  |||||||||    
T  10672721 aaatttaccaacatagtctacattcagggactgttttataatttttatgcattcgaagactaaagtgactactcatttctcattcaggga 10672632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 10588156 - 10588080
Alignment:
Q  96 tgggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaa 172  Q
    ||||| ||||||||||||||| |   ||| ||||| ||||  |||||| ||||| |||||||||| |||||||||||    
T  10588156 tgggagattagtcactttagtccctgaataggaaaggagttgtcacttaagtccatgaatgcagataaattgcaaaa 10588080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 138; Significance: 6e-72; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 101 - 371
Target Start/End: Complemental strand, 50335721 - 50335455
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||||||||||||| | | ||||| |||  |||| |||||||| |||||||||||||| ||||||||||||| ||    | ||||| |||| | ||||    
T  50335721 aattagtcactttagtcccagaatggaaaaaaagtagtcactttaatccctgaatgcagacaaattgcaaaacagtc----cctgaatgtagactctgtt 50335626  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
    ||||||||| |||||||||||||| || | |||||||||||||  |||||||||||| |||||| ||||||||||||||||||||| ||||||| |||||    
T  50335625 ggtcaattttagggactaaagtgattagcggagtctacattcagggactaaattgacgaacggagtctgcattcagggactaaattgactaacaaagtct 50335526  T
Q  301 acattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcaggga 371  Q
    ||||||| ||||||||||||||||||| || ||||| |||||||||||||||||| |||||||||||||||    
T  50335525 acattcatggactattttgcaatttatctgcattcagggactaaagtgacgactcatttcctattcaggga 50335455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 103 - 372
Target Start/End: Complemental strand, 37608249 - 37607985
Alignment:
Q  103 ttagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttgg 202  Q
    |||||||||||||| ||  ||||||||| ||||| ||| ||||||||||||||||||| ||||||||||||| ||    | ||||| || |  | |||||    
T  37608249 ttagtcactttagtccttgaatgggaaaggagtagtcattttagtccctgaatgcagagaaattgcaaaacagtc----cctgaatgtaaaact-gttgg 37608155  T
Q  203 tcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctac 302  Q
    |||||||||||||| |||||||||||| |||||||||||||  |||||||||||||||| || |||||||||| |||||||||| |||||||||||||||    
T  37608154 tcaatttcagggaccaaagtgactaacggagtctacattcaaggactaaattgactaacagagtctgcattcaaggactaaattgactaacagagtctac 37608055  T
Q  303 attcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||| ||||||||||||||||||| || ||||| |||||||| |||| | || ||||||||||||||||    
T  37608054 attcaaggactattttgcaatttatatgcattcagggactaaaatgacaattcatttcctattcagggac 37607985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 102 - 365
Target Start/End: Complemental strand, 13735723 - 13735465
Alignment:
Q  102 attagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttg 201  Q
    |||||||||||||||  || ||||||||| ||||| ||| ||||||| ||||||||| | ||||||||||||| ||    | ||||| |||| | ||||     
T  13735723 attagtcactttagtcata-aatgggaaaggagtagtca-tttagtctctgaatgcaaagaaattgcaaaacagtc----cctgaatgtagactctgttt 13735630  T
Q  202 g-tcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
    | ||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||    
T  13735629 gatcaatttcagggactaaagtgactaacggagtctacatttattgactaaattgactaacggagtctgcattcagagactaaattgactaacagagtct 13735530  T
Q  301 acattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctatt 365  Q
    |||||  |||||||||||| ||||||| || ||||| ||||||||||||||||| ||||||||||    
T  13735529 acattgtgggactattttgtaatttatctgcattcagggactaaagtgacgacttctttcctatt 13735465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 99 - 372
Target Start/End: Original strand, 8097712 - 8097981
Alignment:
Q  99 gaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttg 198  Q
    ||||||||||||||||||     |||| ||||| ||||  |||||||||  || |||||||| ||||||||||||| ||  ||  | ||| |||| | ||    
T  8097712 gaaattagtcactttagtctctgaatgagaaattagtagccactttagtttctaaatgcagagaaattgcaaaacagtc--tc--taaatatagactatg 8097807  T
Q  199 ttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagt 298  Q
    ||||||||||| | |||||||| ||||||||||||||||||||||   |||||||||||||| ||| | || ||||| |||||||||| ||||||||| |    
T  8097808 ttggtcaattttaaggactaaaatgactaacagagtctacattcaggaactaaattgactaatggagtatgtattcaaggactaaattgactaacagaat 8097907  T
Q  299 ctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||| ||||| |||||||||||  |||||| || ||||| ||||||||||||  |||| ||||||||| ||||||    
T  8097908 ctatattcatggactattttgtgatttatctgcattcagggactaaagtgaaaactcatttcctatttagggac 8097981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 232 - 350
Target Start/End: Original strand, 32374092 - 32374203
Alignment:
Q  232 agtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttga 331  Q
    ||||||||||||  |||||||||||||||| || | ||||||||||||||||||| |||||       |||||||| ||||||||||||||||||||||     
T  32374092 agtctacattcagggactaaattgactaacagagtttgcattcagggactaaattgactaa-------tacattcatggactattttgcaatttatttgc 32374184  T
Q  332 attcaaggactaaagtgac 350  Q
    ||| | |||||||||||||    
T  32374185 atttagggactaaagtgac 32374203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 133 - 372
Target Start/End: Complemental strand, 42847266 - 42847038
Alignment:
Q  133 agtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaagtgactaacaga 232  Q
    |||| |||||||| |||||||||||||| ||||||||||||||||    ||||||| |||| |||||| |||| |||||        | |||||||||||    
T  42847266 agtagtcactttattccctgaatgcagagaaattgcaaaacaatc----cttgaatgtagactttgttagtcagtttca--------attgactaacaga 42847179  T
Q  233 gtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaacta--acagagtctacattcagggactattttgcaatttatttg 330  Q
    ||||||||| || |||||||||||||||| || | |||||||||  |||||||| ||||  | | | ||||||||||  || |||||| |||||||| ||    
T  42847178 gtctacatttatggactaaattgactaac-gagtttgcattcagatactaaattgactatcatataatctacattcaaagattatttttcaatttatctg 42847080  T
Q  331 aattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
     ||| | |||||||| ||| |||| ||||| |||||| ||||    
T  42847079 catttatggactaaaatgaggacttctttcttattcaaggac 42847038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 11633307 - 11633212
Alignment:
Q  272 ttcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattca 367  Q
    |||| |||||||| | ||||||| | |||||||||| | |||||||| |||||||| ||  |||||| || |||||||||||| ||||||||||||    
T  11633307 ttcaaggactaaagtgactaacataatctacattcatgaactattttacaatttatctgctttcaagaaccaaagtgacgacttctttcctattca 11633212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 13735631 - 13735700
Alignment:
Q  291 aacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcc 361  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||  ||||||| |||| ||||||||||    
T  13735631 aacagagtctacattcagggactgttttgcaatttctttgcattcagagactaaa-tgactactcctttcc 13735700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 372
Target Start/End: Original strand, 37608165 - 37608237
Alignment:
Q  300 tacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||||||||||||| ||||||||||| | || ||||| |||||||| |||| |||||||||| ||||| ||||    
T  37608165 tacattcagggactgttttgcaatttctctgcattcagggactaaaatgactactcctttcccattcaaggac 37608237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 50335435 - 50335511
Alignment:
Q  96 tgggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaa 172  Q
    ||||| ||||||||||||| | |   ||| ||||||||||  ||||||||||||||||||||||| |||||||||||    
T  50335435 tgggagattagtcactttaatccctgaataggaaatgagtcgtcactttagtccctgaatgcagataaattgcaaaa 50335511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 350
Target Start/End: Original strand, 50335617 - 50335685
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgac 350  Q
    ||||| || ||||||||||||||||||||||| ||||||||||| | || ||||| ||| |||||||||    
T  50335617 aaattgaccaacagagtctacattcagggactgttttgcaatttgtctgcattcagggattaaagtgac 50335685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 372
Target Start/End: Complemental strand, 32374088 - 32373999
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||| ||||||| |||||||||||| | ||| |||||||| || | || || || ||||||||||||| ||| |||||||||||||||||    
T  32374088 aaattgactaacacagtctacattcaagaactgttttgcaaattctatgcatccagggactaaagtgactact-ctttcctattcagggac 32373999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 244
Target Start/End: Complemental strand, 11633316 - 11633271
Alignment:
Q  199 ttggtcaatttcagggactaaagtgactaacagagtctacattcat 244  Q
    ||||||||||||| |||||||||||||||||| | |||||||||||    
T  11633316 ttggtcaatttcaaggactaaagtgactaacataatctacattcat 11633271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 260
Target Start/End: Original strand, 32374100 - 32374152
Alignment:
Q  208 ttcagggactaaagtgactaacagagtctacattcatagactaaattgactaa 260  Q
    ||||||||||||| ||||||||||||| | ||||||  |||||||||||||||    
T  32374100 ttcagggactaaattgactaacagagtttgcattcagggactaaattgactaa 32374152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 364
Target Start/End: Original strand, 42847200 - 42847276
Alignment:
Q  288 actaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctat 364  Q
    ||||||| |||||||||||| ||| | ||||||||||| | || ||||| ||| ||||||||| |||  ||||||||    
T  42847200 actaacaaagtctacattcaaggattgttttgcaatttctctgcattcagggaataaagtgactacttttttcctat 42847276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 137; Significance: 2e-71; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 101 - 354
Target Start/End: Original strand, 14197458 - 14197707
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    ||||| |||||||||| |  ||||||||||  |||| |||||||||||||| |||||||| ||||||||||||| |||    | |||| |||||| ||||    
T  14197458 aattaatcactttagttcctcaatgggaaaaaagtagtcactttagtccctaaatgcagagaaattgcaaaacagtca----tcgaatgtagattctgtt 14197553  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
    ||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||||||||| |||||| |||||||||||||    
T  14197554 ggtcaatttcagggactaaagtgactaacggagtctacattgagagactaaattgactaacggagtctgcattcagggattaaattgactaacagagtct 14197653  T
Q  301 acattcagggactattttgcaatttatttgaattcaaggactaaagtgacgact 354  Q
    ||||||||||||||| ||||||||||| || ||||| || ||||| ||||||||    
T  14197654 acattcagggactatattgcaatttatctgcattcaggggctaaaatgacgact 14197707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 96 - 372
Target Start/End: Complemental strand, 27508861 - 27508589
Alignment:
Q  96 tgggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagatt 195  Q
    |||| |||||||||||||| | |   ||||| ||| ||||| ||||||||||||||||| | ||| ||||||||||||| ||    | ||||| |||| |    
T  27508861 tggggaattagtcactttaatccctgaatggaaaaggagtagtcactttagtccctgaacgtagagaaattgcaaaacagtc----cctgaatgtagact 27508766  T
Q  196 ttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacag 295  Q
     |||| |||||||||| ||||||||||||||||| |||||||||||||  |||||||||||||||| || ||||||||||||||||||||| |||||||     
T  27508765 ctgttagtcaatttcatggactaaagtgactaacggagtctacattcagggactaaattgactaacagagtctgcattcagggactaaattgactaacat 27508666  T
Q  296 agtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||| ||||||||||||||||    
T  27508665 agtctacattcagggactattttgcaatttatctgcattcagggactaaagtgatgactcatttcctattcagggac 27508589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 122 - 372
Target Start/End: Original strand, 38761013 - 38761258
Alignment:
Q  122 aatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaag 221  Q
    |||||||||  |||| |||||||||| | |||||| ||| ||||||||||||| ||      || || |||| | ||||| |||||||  ||||||||||    
T  38761013 aatgggaaagaagtagtcactttagttcgtgaatgtagagaaattgcaaaacagtcc-----tggatgtagactctgttgatcaatttttgggactaaag 38761107  T
Q  222 tgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgca 321  Q
    ||||||||||||||| ||||||  |||||||||||||||| || |||||||||  |||||||||| | ||||| ||||||||||||||||||||||||||    
T  38761108 tgactaacagagtctgcattcagggactaaattgactaacagagtctgcattcgaggactaaattgattaacaaagtctacattcagggactattttgca 38761207  T
Q  322 atttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||||| || ||||| |||||||||||| ||||| ||||||||||||||||    
T  38761208 atttatctgcattcagggactaaagtgatgactcatttcctattcagggac 38761258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 104 - 368
Target Start/End: Original strand, 5080111 - 5080371
Alignment:
Q  104 tagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggt 203  Q
    ||||||||||||| |   |||||||||  |||| |||||||||| |||||||||||| ||| ||||||||| ||     |||||| |||| | |||| ||    
T  5080111 tagtcactttagtccctgaatgggaaaaaagtagtcactttagttcctgaatgcagagaaaatgcaaaacagtct----ttgaatgtagactctgttagt 5080206  T
Q  204 caatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctaca 303  Q
    |||||||| |||||||| ||| |||| |||||||||||||   |||||||||| ||||||| ||||||||||||||||||||| ||||| | ||| ||||    
T  5080207 caatttcaaggactaaaatgattaacggagtctacattcaggtactaaattgattaacggagtctgcattcagggactaaattgactaatatagtttaca 5080306  T
Q  304 ttcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcag 368  Q
    ||||| ||||||||| |||||||| || ||||| |||||||| | |||||| |||||||||||||    
T  5080307 ttcagagactattttacaatttatctgcattcagggactaaaataacgacttctttcctattcag 5080371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 101 - 372
Target Start/End: Complemental strand, 15000926 - 15000659
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||| ||||||||| |   ||||||||||||||| |||||||||||  || |||||||  |||||||||||| ||    | | ||| |||| ||| ||    
T  15000926 aattagccactttagtccctgaatgggaaatgagtagtcactttagtctttggatgcagaggaattgcaaaacagtc----cctaaatgtagactttatt 15000831  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
    ||||||||||||||||||||||| | ||| ||||||||||| |  |||||||||||||| |||| ||| |||||| |||||||| | ||||||| | |||    
T  15000830 ggtcaatttcagggactaaagtgtccaacggagtctacattaagggactaaattgactatcggagtcttcattcaaggactaaactgactaacataatct 15000731  T
Q  301 acattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||||| | || ||||||||||||||| || ||||| ||||||||||||| | |||||||||||||||||||    
T  15000730 acattctgagaatattttgcaatttatctgcattcagggactaaagtgacaattcctttcctattcagggac 15000659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 138 - 350
Target Start/End: Original strand, 6441381 - 6441588
Alignment:
Q  138 tcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtcta 237  Q
    ||||| ||||||||||||||| | ||||||||||||| ||    | ||||| |||| | | || |||||||||| |||| |||||||||||| |||||||    
T  6441381 tcactatagtccctgaatgcaaagaaattgcaaaacagtc----cctgaatgtagactct-ttagtcaatttcaaggacaaaagtgactaacggagtcta 6441475  T
Q  238 cattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaa 337  Q
    |||| | ||||||||||||||||| || ||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||| || |||||     
T  6441476 catttagagactaaattgactaacagagtctgcattcagggactaaattgactaacaaagtctacattcagggattattttgcaatttatctgcattcag 6441575  T
Q  338 ggactaaagtgac 350  Q
     ||||||||||||    
T  6441576 agactaaagtgac 6441588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 101 - 317
Target Start/End: Original strand, 45012848 - 45013059
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    ||||||||||||| || |   ||||||||| ||||| ||||||||||| ||||||||| | ||||||||||||||||     |  ||| |||| | | ||    
T  45012848 aattagtcactttggtccctgaatgggaaaggagtagtcactttagtctctgaatgcaaagaaattgcaaaacaatc-----tcaaatgtagactctatt 45012942  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
    |||||||||||||||||||||||| || | ||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||| ||||||| | |||    
T  45012943 ggtcaatttcagggactaaagtgattagcggagtctacattcagagattaaattgactaacggagtctgcattcagggactaaattgactaacaaactct 45013042  T
Q  301 acattcagggactattt 317  Q
    ||||||||| |||||||    
T  45013043 acattcaggaactattt 45013059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 122 - 372
Target Start/End: Original strand, 37787707 - 37787949
Alignment:
Q  122 aatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaag 221  Q
    ||||| ||| ||||| || ||||||||||||||| ||| || |||| |||||| ||  ||  ||||| || |||||||| |||||||| |  || ||||     
T  37787707 aatggaaaaagagtagtccctttagtccctgaatacaggaagattgtaaaacagtc--tc--tgaatataaattttgtttgtcaattttaaagattaaaa 37787802  T
Q  222 tgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgca 321  Q
    |||||| | |||||||||||||  |||||||||||||||| || | ||||||||||||||||||| ||||||| |||||||||||| | |||||||||||    
T  37787803 tgactagcggagtctacattcaacgactaaattgactaacagagtatgcattcagggactaaattgactaacaaagtctacattca-gaactattttgca 37787901  T
Q  322 atttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||   |||| ||||| ||||||||||| ||| || |||| |||||||||||    
T  37787902 at---tttgcattcagggactaaagtggcgattcatttcttattcagggac 37787949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 32921580 - 32921504
Alignment:
Q  20 atatatagtactatgtagtatgacaaagtggagcagttttctttctcctgtcaatgtctttaggccctttaaaaaat 96  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32921580 atatataatactatgtagtatgataaagtggagcagttttctttctcctgtcaatgtctttaggccctttaaaaaat 32921504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 93 - 372
Target Start/End: Complemental strand, 3404744 - 3404471
Alignment:
Q  93 aaatgggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttag 192  Q
    |||||||  ||||||||||||||| |   ||||| ||| ||||| ||||||||| ||||||||||||| ||||||||||| | ||    ||||||| |||    
T  3404744 aaatggggtattagtcactttagttcctaaatggaaaaagagtagtcactttaggccctgaatgcagagaaattgcaaaatagtc----cttgaatgtag 3404649  T
Q  193 attttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaa 292  Q
    | |  ||| |||||| ||||  ||||||||||||||  ||  ||||| |||  |||||||||||||||| ||  ||||||| |||||||||||| |||||    
T  3404648 actcggttagtcaatatcagaaactaaagtgactaatggaa-ctacactcagggactaaattgactaacagag-ctgcatttagggactaaattgactaa 3404551  T
Q  293 cagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||||| |||||||| |||||| |||||||||||| ||  || | | |||||| |||||| | |||| ||||||| ||||    
T  3404550 cagagtgtacattcatggactactttgcaatttatctgcgtttaggtactaaaatgacgatttcttttctattcaaggac 3404471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 249 - 371
Target Start/End: Original strand, 43257375 - 43257497
Alignment:
Q  249 taaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtg 348  Q
    |||||||||||||| | ||| |||| |||||||||||| |||||||||||||| ||||| ||| ||||||||||||||| || ||||| ||| |||||||    
T  43257375 taaattgactaacgaagtctacatttagggactaaattgactaacagagtctatattcaaggattattttgcaatttatctgcattcagggattaaagtg 43257474  T
Q  349 acgactcctttcctattcaggga 371  Q
    ||||||| ||| |||||||||||    
T  43257475 acgactcattttctattcaggga 43257497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 246 - 365
Target Start/End: Complemental strand, 36150987 - 36150868
Alignment:
Q  246 gactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaa 345  Q
    ||||||| ||||||||||| | | ||||||| ||||||||| |||||||||||||||||  ||||| ||||||||||||||| || ||||| ||| | ||    
T  36150987 gactaaaatgactaacggagtttacattcagagactaaattgactaacagagtctacatctagggattattttgcaatttatctgcattcatggatttaa 36150888  T
Q  346 gtgacgactcctttcctatt 365  Q
    |||||||||| |||||||||    
T  36150887 gtgacgactcatttcctatt 36150868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 101 - 261
Target Start/End: Complemental strand, 36151096 - 36150940
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||||||||||||| |    |||| ||||||||| |||||||| ||| ||||||  || ||||||||||||| |     | ||||| |||| ||||||    
T  36151096 aattagtcactttagtccctggatggaaaatgagtagtcactttaatccttgaatgttgagaaattgcaaaacagta----cctgaatgtagactttgtt 36151001  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaac 261  Q
    ||||||||||| |||||||| |||||||| |||| |||||||| |||||||||||||||||    
T  36151000 ggtcaatttcaaggactaaaatgactaacggagtttacattcagagactaaattgactaac 36150940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 45013060 - 45013137
Alignment:
Q  295 gagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||||| ||||| |||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||| ||||||    
T  45013060 gagtctatattcaaggactattttgcaatttatttgcattcaaggactaaactgacgactcttttcctattaagggac 45013137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 101 - 261
Target Start/End: Original strand, 43257263 - 43257419
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||||||||||| | |   ||||| |||||| || |||| |||||||||||||||| | |||||| |||| | ||  ||  ||||| |||||||||||    
T  43257263 aattagtcactttaatccctgaatggaaaatgaatagtcaccttagtccctgaatgcatagaaattgtaaaagagtc--tc--tgaatgtagattttgtt 43257358  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaac 261  Q
    ||||||||||||||| |||| ||||||||  |||||||||| |  ||||||||||||||||    
T  43257359 ggtcaatttcagggagtaaattgactaacgaagtctacatttagggactaaattgactaac 43257419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 282 - 371
Target Start/End: Original strand, 27508752 - 27508841
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcaggga 371  Q
    ||||| |||||||||||||||||||||||||| ||||||||||| | |   |||| ||||||||||||| |||||||| | |||||||||    
T  27508752 aaattgactaacagagtctacattcagggactgttttgcaatttctctacgttcagggactaaagtgactactccttttccattcaggga 27508841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 15272326 - 15272435
Alignment:
Q  105 agtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtc 204  Q
    |||||||||||| |   |||| |||||||||| ||| ||||||||||||||||||| |||||||||||     | ||| ||||| |||| ||||||||||    
T  15272326 agtcactttagtccgtgaatgagaaatgagtagtcattttagtccctgaatgcagagaaattgcaaaa----tagtccctgaatgtagactttgttggtc 15272421  T
Q  205 aatttcagggacta 218  Q
    ||||||||||||||    
T  15272422 aatttcagggacta 15272435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 282 - 360
Target Start/End: Complemental strand, 15272426 - 15272348
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttc 360  Q
    ||||| || |||| |||||||||||||||||||||||||||||| | || ||||| |||||||| |||| |||| ||||    
T  15272426 aaattgaccaacaaagtctacattcagggactattttgcaatttctctgcattcagggactaaaatgactactcatttc 15272348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 350
Target Start/End: Complemental strand, 6441436 - 6441380
Alignment:
Q  294 agagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgac 350  Q
    |||||||||||||||||||| ||||||||||| |||| ||||| |||||| ||||||    
T  6441436 agagtctacattcagggactgttttgcaatttctttgcattcagggactatagtgac 6441380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 38761277 - 38761201
Alignment:
Q  96 tgggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaa 172  Q
    ||||| |||| |||||||||| |   ||| ||||||||||  ||||||||||||||||||||||| |||||||||||    
T  38761277 tgggagattaatcactttagtccctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaa 38761201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 355
Target Start/End: Original strand, 3404638 - 3404705
Alignment:
Q  288 actaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactc 355  Q
    |||||| ||||||||||||| ||||||||||||||||| | || ||||| || |||||||||| ||||    
T  3404638 actaaccgagtctacattcaaggactattttgcaatttctctgcattcagggcctaaagtgactactc 3404705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 372
Target Start/End: Complemental strand, 5080212 - 5080122
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||| ||||||||||||||||||||  |||| ||||||| ||| | || ||||| | ||||||||||| |||  ||||| ||||||||||    
T  5080212 aaattgactaacagagtctacattcaaagactgttttgcattttctctgcattcaggaactaaagtgactacttttttcccattcagggac 5080122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 27508600 - 27508646
Alignment:
Q  126 ggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaa 172  Q
    ||||||||||  ||||||||||||||||||||||| |||||||||||    
T  27508600 ggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaa 27508646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 315 - 372
Target Start/End: Complemental strand, 45012919 - 45012862
Alignment:
Q  315 ttttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||||||||| |||| |||||  |||||||||||| |||||||||| ||||||||||    
T  45012919 ttttgcaatttctttgcattcagagactaaagtgactactcctttcccattcagggac 45012862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 372
Target Start/End: Original strand, 15000836 - 15000912
Alignment:
Q  296 agtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||||||||| ||||||| ||||||||||  | || || ||| |||||||||||| |||| ||||| ||||||||||    
T  15000836 agtctacatttagggactgttttgcaattcctctgcatccaaagactaaagtgactactcatttcccattcagggac 15000912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 172
Target Start/End: Original strand, 15000682 - 15000716
Alignment:
Q  138 tcactttagtccctgaatgcagaaaaattgcaaaa 172  Q
    ||||||||||||||||||||||| |||||||||||    
T  15000682 tcactttagtccctgaatgcagataaattgcaaaa 15000716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 372
Target Start/End: Complemental strand, 38761086 - 38761006
Alignment:
Q  291 aacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||||||||||||| |||| ||| ||||||||||| | |  ||||| | ||||||||||| ||| |||||| ||||||||||    
T  38761086 aacagagtctacatccagg-actgttttgcaatttctctacattcacgaactaaagtgactacttctttcccattcagggac 38761006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 43257485 - 43257436
Alignment:
Q  128 aaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatc 177  Q
    ||||||||  |||||||| |||||||||||||| ||||||||||| ||||    
T  43257485 aaatgagtcgtcactttaatccctgaatgcagataaattgcaaaataatc 43257436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 36150843 - 36150923
Alignment:
Q  97 gggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatc 177  Q
    |||| ||||||||||||||| |   ||| ||||||||||  |||||| | ||| |||||||||| ||||||||||| ||||    
T  36150843 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatccatgaatgcagataaattgcaaaataatc 36150923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 4e-70; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 101 - 372
Target Start/End: Original strand, 21943742 - 21944009
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||||||||||||| ||  ||||||||||||||| |||||||||| |||||||||||| |||||||||||||  |    ||||||| |||| ||||||    
T  21943742 aattagtcactttagtccttgaatgggaaatgagtagtcactttagtacctgaatgcagagaaattgcaaaacagac----cttgaatgtagactttgtt 21943837  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
     |||||||| |||||||||||||| ||||| | |||||||||| |||||||||||||||||  | | ||||||||||||||||||| | |||||||||||    
T  21943838 agtcaattttagggactaaagtgattaacataatctacattcaaagactaaattgactaacaaagtatgcattcagggactaaattgattaacagagtct 21943937  T
Q  301 acattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||||| | |||||||||||||||||||| |||||| ||||||| |||||| || ||| ||||||||||||    
T  21943938 acattcatgaactattttgcaatttatttgcattcaatgactaaaatgacgattcattttctattcagggac 21944009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 128 - 371
Target Start/End: Original strand, 10760034 - 10760272
Alignment:
Q  128 aaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaagtgacta 227  Q
    |||||||||  ||||||||| |||||||| ||| |||||| |||||| ||    | ||||| || | ||||||||||||||||| |||||||| ||| ||    
T  10760034 aaatgagtagccactttagttcctgaatgtagagaaattgaaaaacagtc----cctgaatgtaaactttgttggtcaatttcaaggactaaa-tgatta 10760128  T
Q  228 acagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttat 327  Q
    || |||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||    
T  10760129 acggagtctacattcagggactaaattgactaacggagtctgcattcagggactaaattgacttacagagtctacatttagggactattttgcaatttat 10760228  T
Q  328 ttgaattcaaggactaaagtgacgactcctttcctattcaggga 371  Q
     || |||||  ||||||||||||| ||| |||||||||||||||    
T  10760229 ctgcattcagagactaaagtgacggctcatttcctattcaggga 10760272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 95 - 372
Target Start/End: Original strand, 13753222 - 13753495
Alignment:
Q  95 atgggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagat 194  Q
    ||||| |||||||||||||||| |   ||| | ||||||||| |||||||||||  |||||||||| ||||||||||||| |  |||  ||| | ||||     
T  13753222 atggggaattagtcactttagtccctaaatagaaaatgagtagtcactttagtcattgaatgcagagaaattgcaaaacagt--atc--tgagtgtagac 13753317  T
Q  195 tttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaaca 294  Q
    | |||||||||||||||||||||||||||||| |  |||||||| ||||  | ||||||||||||||||| |||||||| | |||||||||| ||| |||    
T  13753318 tctgttggtcaatttcagggactaaagtgactgatggagtctactttcaggggctaaattgactaacggagtctgcatttaaggactaaattgacttaca 13753417  T
Q  295 gagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||||||||| ||||||||||||||||||||| || |||||  ||||||| |||||||| |||||||||| ||||||    
T  13753418 gagtctacatttagggactattttgcaatttatctgcattcagagactaaaatgacgacttctttcctatttagggac 13753495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 105 - 327
Target Start/End: Complemental strand, 17497271 - 17497053
Alignment:
Q  105 agtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtc 204  Q
    |||||||||||| |   |||| |||||||||| ||| ||||||||||||||||||| ||||||||||| | ||    | ||||| |||| ||||||||||    
T  17497271 agtcactttagtccgtgaatgagaaatgagtagtcattttagtccctgaatgcagagaaattgcaaaatagtc----cctgaatgtagactttgttggtc 17497176  T
Q  205 aatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacat 304  Q
    |||||||||||||||||||||  || |||||||||||||  ||||||||| |||||| ||||||||||||| |||||||||| |||||||||| ||||||    
T  17497175 aatttcagggactaaagtgaccgacggagtctacattcagggactaaattaactaacagaatctgcattcaaggactaaattgactaacagagactacat 17497076  T
Q  305 tcagggactattttgcaatttat 327  Q
    ||| |||||||||||||||||||    
T  17497075 tcacggactattttgcaatttat 17497053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 96 - 368
Target Start/End: Complemental strand, 2555724 - 2555456
Alignment:
Q  96 tgggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagatt 195  Q
    |||| |||||||||| ||||| |   |||||||||| | || | ||||||||| || |||||||||||||||||||||| ||    | ||||| |||| |    
T  2555724 tggggaattagtcacgttagtccctgaatgggaaataattagttactttagtctctaaatgcagaaaaattgcaaaacagtc----cctgaatgtagact 2555629  T
Q  196 ttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacag 295  Q
      |||||||||||||||||| |||||||||||||  ||||||| ||||  |||||| |||||||||| | ||||||||||  ||||||||| ||||||||    
T  2555628 gcgttggtcaatttcagggattaaagtgactaacgaagtctacgttcagggactaatttgactaacgaagtctgcattcaacgactaaattgactaacag 2555529  T
Q  296 agtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcag 368  Q
    ||||||||||||| |||||||||||||| |||||| ||||| |||||||||| ||||||| ||||||| ||||    
T  2555528 agtctacattcagagactattttgcaatatatttgtattcagggactaaagttacgactcatttcctactcag 2555456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 101 - 327
Target Start/End: Original strand, 30100613 - 30100832
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||||||||||||| |   | || |||| ||||| |||||||| ||||| |||||||| ||||||||||||||||    ||||||| |||| ||| ||    
T  30100613 aattagtcactttagtccctaagtgagaaaagagtagtcactttaatccctaaatgcagagaaattgcaaaacaatc----cttgaatgtagactttatt 30100708  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
       |||||||||||||||||||||| |||||||||||||||||  ||||| ||||||||| ||| ||||||||||||||||||| | | |||||||||||    
T  30100709 ---caatttcagggactaaagtgacaaacagagtctacattcagggactatattgactaatggagtctgcattcagggactaaagtgattaacagagtct 30100805  T
Q  301 acattcagggactattttgcaatttat 327  Q
     |||||| |||||||||||||||||||    
T  30100806 gcattcatggactattttgcaatttat 30100832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 104 - 289
Target Start/End: Original strand, 21211419 - 21211599
Alignment:
Q  104 tagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggt 203  Q
    ||||||||||||| |   ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||  ||  ||||| |||| |||||||||    
T  21211419 tagtcactttagtccctgaatgggaaatgagtagtcactttagtccctgaatgcagaaaaattgcaaaacagtc--tc--tgaatgtagactttgttggt 21211514  T
Q  204 caatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaac 289  Q
    |||||||||| |||||||||||||||  | |||||||||| |||||||||| |||||||| ||||||||||| | |||||||||||    
T  21211515 caatttcaggaactaaagtgactaacgcaatctacattcagagactaaattaactaacgg-atctgcattcatgaactaaattaac 21211599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 184 - 368
Target Start/End: Complemental strand, 34419681 - 34419497
Alignment:
Q  184 tgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaa 283  Q
    ||||| |||| |||||||||||||||||||||||||| |||| ||||||||||||||| |  ||||||||||||||||| | ||||| || |  ||||||    
T  34419681 tgaatgtagactttgttggtcaatttcagggactaaaatgaccaacagagtctacatttaaggactaaattgactaacgaagtctgcttttatcgactaa 34419582  T
Q  284 attaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcag 368  Q
    ||| |||||||||   |||||||||||||||||||||||||||| || ||||   || |||||||||||||||||| ||||||||    
T  34419581 attgactaacagaacttacattcagggactattttgcaatttatctgcattctgagattaaagtgacgactccttttctattcag 34419497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 197 - 372
Target Start/End: Complemental strand, 30852767 - 30852599
Alignment:
Q  197 tgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacaga 296  Q
    ||||||||||||||| | ||||||||||||||| || |||||||||| |||||||||||||| ||| | ||||||||||||||||||||| |||||||||    
T  30852767 tgttggtcaatttcatgaactaaagtgactaacggaatctacattcagagactaaattgacttacgaagtctgcattcagggactaaattgactaacaga 30852668  T
Q  297 gtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    || |||||||||| |||||       ||||| || ||||| |||||||||||||||||  ||||||||||| ||||    
T  30852667 gtttacattcaggaactat-------tttatctgtattcagggactaaagtgacgacttatttcctattcaaggac 30852599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 103 - 364
Target Start/End: Original strand, 20429878 - 20430131
Alignment:
Q  103 ttagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttgg 202  Q
    |||||||||||||| |   |||| |||| ||||| || |||||| | ||| ||||||| ||||||||||||| ||     |||||| |||| | ||||||    
T  20429878 ttagtcactttagtccctgaatgtgaaaggagtagtcgctttagcctctggatgcagagaaattgcaaaacagtct----ttgaatgtagactctgttgg 20429973  T
Q  203 tcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctac 302  Q
    ||||||||| ||||||||||||| |||||||| |||||||| | |||||||| |||||| || |||||||||| | |||||||| |||||| |||||||     
T  20429974 tcaatttcaaggactaaagtgacgaacagagtttacattcaaaaactaaattaactaacagagtctgcattcatgaactaaattgactaacggagtctat 20430073  T
Q  303 attcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctat 364  Q
    |||||   |||||||||||||||||    |||| ||||||||| | ||||||| ||||||||    
T  20430074 attcaaaaactattttgcaatttat----attcgaggactaaaatcacgactcgtttcctat 20430131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 102 - 372
Target Start/End: Complemental strand, 19491951 - 19491685
Alignment:
Q  102 attagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttg 201  Q
    ||||||||||||||| |   |||| |||| ||||| |||||| ||||| |||||||||| ||||||||||||| |     ||||||  |||| | ||||     
T  19491951 attagtcactttagttcctgaatgagaaaagagtagtcacttaagtccttgaatgcagagaaattgcaaaacagtg----cttgaacgtagactctgtta 19491856  T
Q  202 gtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtcta 301  Q
    |||||||||| ||| ||| ||||||||| ||||||| |||||  ||||||||||| ||||| | |||||||||||  ||||| || ||||||| ||| ||    
T  19491855 gtcaatttcaaggattaatgtgactaactgagtctaaattcagggactaaattgattaacgaagtctgcattcagatactaagttgactaacatagtata 19491756  T
Q  302 cattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||||   ||||||||||||||||| || |||||  |||||||||||  | | |||||||||||||||||    
T  19491755 cattcataaactattttgcaatttatctgcattcatagactaaagtgataatttctttcctattcagggac 19491685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 203 - 371
Target Start/End: Original strand, 19564752 - 19564920
Alignment:
Q  203 tcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctac 302  Q
    |||||||||||||||||||||| |||  ||||||||||||| |||||||||||||||||||| | || | ||| ||| |||||| ||||||  ||| |||    
T  19564752 tcaatttcagggactaaagtgattaatggagtctacattcagagactaaattgactaacggagtatggaatcaaggaataaattgactaacgaagtttac 19564851  T
Q  303 attcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcaggga 371  Q
    |||||   ||||||||||||||||| |  |||||||||||||||||||||||  ||||||||| |||||    
T  19564852 attcaaaaactattttgcaatttatctccattcaaggactaaagtgacgactgatttcctatttaggga 19564920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 101 - 368
Target Start/End: Original strand, 31912195 - 31912458
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||||||||||||| ||  ||||||||| || || ||| |||| |||||||||||||| | |||| |||||| |||    || ||  ||||    |||    
T  31912195 aattagtcactttagtccttgaatgggaaaagaatagtcattttaatccctgaatgcagagacattgtaaaacagtca----tttaacgtagacaacgtt 31912290  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
     |||||||||| ||||||||||||||||||||||||||| | |  ||||||||||||||||||| |||| ||||| |||||||||  |  |||| | |||    
T  31912291 agtcaatttcatggactaaagtgactaacagagtctacagtaaatgactaaattgactaacggagtctgtattcaaggactaaatcgatcaacataatct 31912390  T
Q  301 acattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcag 368  Q
    ||||||| | | |||||| ||||||||||  ||| | |||||||| |||||||| |||||||||||||    
T  31912391 acattcaagaattattttacaatttatttacatttatggactaaaatgacgacttctttcctattcag 31912458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 327
Target Start/End: Complemental strand, 11298164 - 11298017
Alignment:
Q  180 tccttgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcaggga 279  Q
    |||||||||  ||| |||||| |||||||| |  || |||||||| ||||||||||||||||||   |||||||||||||| ||| ||||||||||| ||    
T  11298164 tccttgaatgaagactttgttagtcaattttaaagattaaagtgattaacagagtctacattcaggaactaaattgactaatggagtctgcattcagaga 11298065  T
Q  280 ctaaattaactaacagagtctacattcagggactattttgcaatttat 327  Q
    ||||||| ||||||||||||||  |||||||| |||||||||||||||    
T  11298064 ctaaattgactaacagagtctatgttcagggattattttgcaatttat 11298017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 150 - 327
Target Start/End: Complemental strand, 12895757 - 12895586
Alignment:
Q  150 ctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagact 249  Q
    ||||||||||| ||||||||||||| ||     |||||| |||||||||||||||| ||| ||| |||||||| | ||||  |||||||||| ||| |||    
T  12895757 ctgaatgcagagaaattgcaaaacagtcg----ttgaatgtagattttgttggtcatttt-aggtactaaagtaattaacgaagtctacatttata-act 12895664  T
Q  250 aaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttat 327  Q
    |||||||||||| || |||||||| | ||| |||||| ||||||| ||||||||||| | |||||||||  |||||||    
T  12895663 aaattgactaacagagtctgcatttaaggattaaattgactaacaaagtctacattcggagactattttttaatttat 12895586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 282 - 372
Target Start/End: Complemental strand, 21211520 - 21211430
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||| || |||| ||||||||||||| |||| ||||||||||| | || ||||| ||||||||||||| |||| ||||| ||||||||||    
T  21211520 aaattgaccaacaaagtctacattcagagactgttttgcaatttttctgcattcagggactaaagtgactactcatttcccattcagggac 21211430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 17497171 - 17497249
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttc 360  Q
    ||||| || |||| |||||||||||||||||||||||||||||| | || ||||| |||||||| |||| |||| ||||    
T  17497171 aaattgaccaacaaagtctacattcagggactattttgcaatttctctgcattcagggactaaaatgactactcatttc 17497249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 203 - 276
Target Start/End: Original strand, 32539365 - 32539437
Alignment:
Q  203 tcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcag 276  Q
    ||||||||||| |||||||||||||||| ||||||||||||   |||||||||||||||| | | |||||||||    
T  32539365 tcaatttcagg-actaaagtgactaacatagtctacattcaagaactaaattgactaacgaagtatgcattcag 32539437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 19491848 - 19491935
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagg 369  Q
    ||||| ||||||||||||||| |||| | ||| ||||||||||| | || ||||||||||| ||||||| |||| ||||  |||||||    
T  19491848 aaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattcaaggacttaagtgactactcttttctcattcagg 19491935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 365
Target Start/End: Original strand, 21211603 - 21211658
Alignment:
Q  310 gactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctatt 365  Q
    |||||||||||||||||| || ||||| ||||||||||||| || |||||||||||    
T  21211603 gactattttgcaatttatctgcattcagggactaaagtgaccacccctttcctatt 21211658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 372
Target Start/End: Complemental strand, 13753332 - 13753242
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||| || ||||||||||||| ||||  ||| ||||||||||| | || |||||| |||||||||||| |||| ||| ||||| ||||||    
T  13753332 aaattgaccaacagagtctacactcagatactgttttgcaatttctctgcattcaatgactaaagtgactactcattttctatttagggac 13753242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 372
Target Start/End: Complemental strand, 21943846 - 21943756
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||| ||||||| |||||||||||| || || ||||||||||| | || ||||| | ||||||||||| |||| ||||| ||||| ||||    
T  21943846 aaattgactaacaaagtctacattcaaggtctgttttgcaatttctctgcattcaggtactaaagtgactactcatttcccattcaaggac 21943756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 284
Target Start/End: Complemental strand, 43549015 - 43548870
Alignment:
Q  138 tcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaa---agtgactaacagagt 234  Q
    |||||||||||| ||| |||||| ||||||||||||| |  ||    |||| |||| | ||||||||||||| ||| |||||   ||||||||| | | |    
T  43549015 tcactttagtccttgattgcagagaaattgcaaaacagtacat----gaatgtagactatgttggtcaattttaggaactaattaagtgactaaaaaaat 43548920  T
Q  235 ctacattcatagactaaattgactaacggaatctgcattcagggactaaa 284  Q
    ||||||| | |  |||||||||||||| || |||||||||| ||||||||    
T  43548919 ctacatttagatgctaaattgactaacagagtctgcattcatggactaaa 43548870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 34419735 - 34419676
Alignment:
Q  97 gggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatg 156  Q
    |||||||||||||||||| | ||  |||| |||| ||||| |||||||||||||||||||    
T  34419735 gggaaattagtcactttaatccttgaatgagaaaggagtagtcactttagtccctgaatg 34419676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 21211526 - 21211572
Alignment:
Q  247 actaaattgactaacggaatctgcattcagggactaaattaactaac 293  Q
    |||||| ||||||||| ||||| ||||||| ||||||||||||||||    
T  21211526 actaaagtgactaacgcaatctacattcagagactaaattaactaac 21211572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 172
Target Start/End: Complemental strand, 21211642 - 21211608
Alignment:
Q  138 tcactttagtccctgaatgcagaaaaattgcaaaa 172  Q
    ||||||||||||||||||||||| |||||||||||    
T  21211642 tcactttagtccctgaatgcagataaattgcaaaa 21211608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 30852580 - 30852644
Alignment:
Q  96 tgggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcaga 160  Q
    ||||| ||||||||||||||| ||  ||| |||||| |||  |||||||||||||||||| ||||    
T  30852580 tgggagattagtcactttagtccttgaataggaaataagtcgtcactttagtccctgaatacaga 30852644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 350
Target Start/End: Original strand, 43548948 - 43549016
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgac 350  Q
    ||||| || |||| |||||||||||| | ||| ||||||||||| | || | |||||||||||||||||    
T  43548948 aaattgaccaacatagtctacattcatgtactgttttgcaatttctctgcaatcaaggactaaagtgac 43549016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 1e-63; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 101 - 366
Target Start/End: Complemental strand, 22093140 - 22092879
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    ||||| |||||||||| |   ||||| |||||| || | ||||||||||||||||| ||| ||||||||||||| ||  ||  ||||| |||||| ||||    
T  22093140 aattaatcactttagttcctgaatggaaaatgattagttactttagtccctgaatgtagagaaattgcaaaacagtc--tc--tgaatgtagattctgtt 22093045  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
    |||||| |||||||||||||||||| ||| ||||||| |||||  |||||||||||| || ||| |||||||||||| |||||| | |||||||||||||    
T  22093044 ggtcaaattcagggactaaagtgacaaacggagtctatattcagggactaaattgacgaatggagtctgcattcaggaactaaactgactaacagagtct 22092945  T
Q  301 acattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattc 366  Q
    |||||||||||||||||| |||||||| || | |||||||||||||||||||||||||||||||||    
T  22092944 acattcagggactattttacaatttatctgcaatcaaggactaaagtgacgactcctttcctattc 22092879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 138 - 372
Target Start/End: Original strand, 24006916 - 24007146
Alignment:
Q  138 tcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtcta 237  Q
    ||||||||||||||||||||||| ||||||||||||| ||    | ||||| |||| | ||||  |||||||||| ||||||| ||| ||||||||||||    
T  24006916 tcactttagtccctgaatgcagagaaattgcaaaacagtc----cctgaatgtagactctgttactcaatttcagagactaaaatgattaacagagtcta 24007011  T
Q  238 cattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaa 337  Q
    ||||||   |||| |||||  ||||||||||||||||| |||||||||| ||||||||||||||||||||  | ||||||| |||||||| || ||||||    
T  24007012 cattcaggtactacattgatcaacggaatctgcattcatggactaaattgactaacagagtctacattcaaagtctattttacaatttatctgtattcaa 24007111  T
Q  338 ggactaaagtgacgactcctttcctattcagggac 372  Q
    |||||||||| ||||||| ||||||| ||| ||||    
T  24007112 ggactaaagtaacgactcatttcctagtcaaggac 24007146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 182 - 372
Target Start/End: Original strand, 39598583 - 39598773
Alignment:
Q  182 cttgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggact 281  Q
    ||||||| |||| |||||| |||||||| ||||||||||||||||||| |||||||||||||  ||||||||||||||||||| | | ||||||| ||||    
T  39598583 cttgaatgtagactttgttagtcaattttagggactaaagtgactaacggagtctacattcagggactaaattgactaacggagtatacattcagcgact 39598682  T
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||| || |||| |||||||||||||||||||||||||||||||| || |||||  ||||||| |||  | | |||||||||| ||||||    
T  39598683 aaattgaccaacaaagtctacattcagggactattttgcaatttatctgcattcagtgactaaaatgaaaatttctttcctattgagggac 39598773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 184 - 366
Target Start/End: Complemental strand, 31820115 - 31819933
Alignment:
Q  184 tgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaa 283  Q
    ||||| |||||| |||| |||||||| |||||||||||||| |||| |||| |||||||| ||||||||||||||||   | |||||||||| |||||||    
T  31820115 tgaatgtagattctgttagtcaattttagggactaaagtgattaacggagtatacattcagagactaaattgactaagaaagtctgcattcaaggactaa 31820016  T
Q  284 attaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattc 366  Q
    ||  ||||||||||||||||||||| ||||||||| |||||||| || ||| | |||||||| |||||| |||||||||||||    
T  31820015 atggactaacagagtctacattcagtgactattttccaatttatctgcatttagggactaaaatgacgattcctttcctattc 31819933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 190 - 350
Target Start/End: Original strand, 31499434 - 31499594
Alignment:
Q  190 tagattttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaac 289  Q
    ||||||||||||||||||||||||||| |||||||| || | ||||||||||||  ||||||||||||||||||| |||||||||||  |||||| | ||    
T  31499434 tagattttgttggtcaatttcagggaccaaagtgacaaataaagtctacattcaaggactaaattgactaacggagtctgcattcagaaactaaaatgac 31499533  T
Q  290 taacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgac 350  Q
    ||||||| ||||||||||||||||||||| |||||||| |  |||||| || |||||||||    
T  31499534 taacagattctacattcagggactattttacaatttatctacattcaaagattaaagtgac 31499594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 101 - 282
Target Start/End: Original strand, 32092758 - 32092935
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||||||||||||| |   ||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||    | ||||| |||| | ||||    
T  32092758 aattagtcactttagtccctgaatgggaaatgagtagtcactttagtccctgaatgcagagaaattgcaaaacagtc----cctgaatgtagactctgtt 32092853  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggacta 282  Q
     |||||| ||||| |||||||||||||||  ||||||||||||  |||||||||||||||| || ||| |||||||||||||    
T  32092854 tgtcaatctcaggaactaaagtgactaacgaagtctacattcagggactaaattgactaacagagtctacattcagggacta 32092935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 247 - 350
Target Start/End: Original strand, 32092868 - 32092971
Alignment:
Q  247 actaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaag 346  Q
    |||||| ||||||||| | ||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| || ||||| |||||||||    
T  32092868 actaaagtgactaacgaagtctacattcagggactaaattgactaacagagtctacattcagggactatttttcaatttatctgcattcagggactaaag 32092967  T
Q  347 tgac 350  Q
    ||||    
T  32092968 tgac 32092971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 220 - 365
Target Start/End: Complemental strand, 8219304 - 8219160
Alignment:
Q  220 agtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttg 319  Q
    |||||||||| ||||| |||||||  || |||||||||||||||| |||||||||||  |||||||| ||||||||||||||||||||  |||||||||     
T  8219304 agtgactaacggagtccacattcagggattaaattgactaacggagtctgcattcagaaactaaattgactaacagagtctacattca-agactatttta 8219206  T
Q  320 caatttatttgaattcaaggactaaagtgacgactcctttcctatt 365  Q
    ||||||||||| | | ||| | |||| |||||| || |||||||||    
T  8219205 caatttatttgcacttaagaattaaaatgacgattcatttcctatt 8219160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 291 - 372
Target Start/End: Complemental strand, 32092853 - 32092772
Alignment:
Q  291 aacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||||||||||||||||||||| ||||||||||| | || ||||| ||||||||||||| |||| ||||| ||||||||||    
T  32092853 aacagagtctacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactcatttcccattcagggac 32092772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 350
Target Start/End: Complemental strand, 24006975 - 24006915
Alignment:
Q  290 taacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgac 350  Q
    |||||||||||||||||||||||| ||||||||||| | || ||||| |||||||||||||    
T  24006975 taacagagtctacattcagggactgttttgcaatttctctgcattcagggactaaagtgac 24006915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 330
Target Start/End: Complemental strand, 17914141 - 17914060
Alignment:
Q  249 taaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttg 330  Q
    |||| ||||||||  ||||| |||| |||| ||||||| ||||||| | |||||||||| ||| ||||||||||||||||||    
T  17914141 taaagtgactaacaaaatctacatttagggtctaaattgactaacaaaatctacattcaaggattattttgcaatttatttg 17914060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 275
Target Start/End: Complemental strand, 8219284 - 8219217
Alignment:
Q  208 ttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattca 275  Q
    |||||||| |||| |||||||| |||||| |||||| | ||||||||||||||| || ||| ||||||    
T  8219284 ttcagggattaaattgactaacggagtctgcattcagaaactaaattgactaacagagtctacattca 8219217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 111; Significance: 7e-56; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 142 - 365
Target Start/End: Complemental strand, 24131 - 23912
Alignment:
Q  142 tttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtctacatt 241  Q
    ||||||||||||||||||| ||||||||||||||||    | ||||| |||||| ||||||||||||||| |||| |||||||| || | ||||||||||    
T  24131 tttagtccctgaatgcagagaaattgcaaaacaatc----cctgaatgtagattctgttggtcaatttcatggacaaaagtgacgaataaagtctacatt 24036  T
Q  242 catagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggac 341  Q
    ||  |||||||||||| ||| || ||||||||||||||||||||| ||||||  ||||||||||| ||||| |||||||||||||| |  ||||||||||    
T  24035 caaggactaaattgaccaacagagtctgcattcagggactaaattgactaacgtagtctacattcggggaccattttgcaatttatctatattcaaggac 23936  T
Q  342 taaagtgacgactcctttcctatt 365  Q
    ||||| |||||||| |||||||||    
T  23935 taaagggacgactcatttcctatt 23912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 2e-50; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 122 - 372
Target Start/End: Original strand, 25149258 - 25149504
Alignment:
Q  122 aatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaag 221  Q
    ||||| ||| ||||| |||||||| |||||||||||| | ||||||||||||| ||    | ||||| |||| | ||||||||||||||| |||||||||    
T  25149258 aatggaaaaagagtagtcactttaatccctgaatgcaaagaaattgcaaaacagtc----cctgaatgtagactctgttggtcaatttcaaggactaaag 25149353  T
Q  222 tgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgca 321  Q
    |||| ||| | |||||| ||||  |||||| ||||||||| || ||||||||||| ||||||||| ||||||| ||||||||||||| || |||||||||    
T  25149354 tgacgaacggtgtctacgttcagggactaacttgactaacagagtctgcattcagagactaaattgactaacaaagtctacattcagagattattttgca 25149453  T
Q  322 atttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
     ||||| || |||||  ||||| ||||||||||| ||||||||||||||||    
T  25149454 gtttatctgcattcagagactatagtgacgactcatttcctattcagggac 25149504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 138 - 367
Target Start/End: Complemental strand, 35202842 - 35202616
Alignment:
Q  138 tcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtcta 237  Q
    |||||||||| |||||||||||| ||||||||||||| ||    | ||||| |  | | ||||||||||||||||| ||||||||||||||| |||||||    
T  35202842 tcactttagttcctgaatgcagagaaattgcaaaacagtc----cctgaatgtttactctgttggtcaatttcaggaactaaagtgactaacggagtcta 35202747  T
Q  238 cattcatag-actaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattca 336  Q
    ||||||  | ||||||||||||||| ||||||||||||||| |||||||| ||||||| |||||||||| | |||| ||||||||||||||||| |||||    
T  35202746 cattcaggggactaaattgactaacagaatctgcattcaggaactaaattgactaacatagtctacatttaaggaccattttgcaatttatttgcattca 35202647  T
Q  337 aggactaaagtgacgactcctttcctattca 367  Q
     |||||||| |||  ||| ||||||||||||    
T  35202646 gggactaaaatgataacttctttcctattca 35202616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 101 - 365
Target Start/End: Original strand, 23976089 - 23976349
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatga-gtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgt 199  Q
    |||||||||||||||| ||  ||||| ||| || ||| |||||||||| |||||||||||| ||||||||||||| ||    | ||||| |||| | |||    
T  23976089 aattagtcactttagtccttgaatggaaaaagaagtagtcactttagttcctgaatgcagagaaattgcaaaacagtc----cctgaatgtagactctgt 23976184  T
Q  200 tggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtc 299  Q
    | |||||||||||||| ||||||||||||||   ||||||||||  | |||||||||| |||||| ||||||||||||| ||||||| |||||||||| |    
T  23976185 tagtcaatttcagggagtaaagtgactaacatgatctacattcaggggctaaattgaccaacggagtctgcattcaggggctaaattgactaacagag-c 23976283  T
Q  300 tacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctatt 365  Q
    ||||||||||||||||||| |||||||| |  ||||| | |||||| ||||||||| |||| ||||    
T  23976284 tacattcagggactattttacaatttatctacattcaggaactaaaatgacgactcatttcttatt 23976349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 142 - 353
Target Start/End: Complemental strand, 18324236 - 18324029
Alignment:
Q  142 tttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtctacatt 241  Q
    ||||||||||||||||||| ||||||||||||| || ||    |||| | || | || |||||||||||| | ||||||||||||||| |||||||||||    
T  18324236 tttagtccctgaatgcagagaaattgcaaaacagtccat----gaatgtcgactctgctggtcaatttcatgaactaaagtgactaacggagtctacatt 18324141  T
Q  242 catagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggac 341  Q
     |  ||||||||||||||||||| | |||||||||| |||||||| ||||| | ||||||||||||||||||||||| |||||||| || ||||| | ||    
T  18324140 taaggactaaattgactaacggagtttgcattcaggaactaaattgactaataaagtctacattcagggactattttacaatttatctgcattcatgaac 18324041  T
Q  342 taaagtgacgac 353  Q
    |||| |||||||    
T  18324040 taaaatgacgac 18324029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 199 - 372
Target Start/End: Original strand, 37543885 - 37544058
Alignment:
Q  199 ttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagt 298  Q
    ||||||||||||| |||||||||||| |||| ||||||| |||||  ||||||||| |||||||||||||||||||||||| |||||| ||||||| |||    
T  37543885 ttggtcaatttcatggactaaagtgattaacggagtctatattcagggactaaattaactaacggaatctgcattcagggattaaattgactaacaaagt 37543984  T
Q  299 ctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||| |||  |||||||||||||||||| |  ||||| |||||||| || ||||| ||||| |||||||||||    
T  37543985 ctacaatcaatgactattttgcaatttatctacattcagggactaaaatggcgacttctttcatattcagggac 37544058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 212 - 372
Target Start/End: Complemental strand, 21124500 - 21124340
Alignment:
Q  212 gggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcaggga 311  Q
    ||||||||| |||||||| ||||||||| |    ||||||||||||||||| | ||||||||||||||||||||| ||||| |||||||||||| || ||    
T  21124500 gggactaaattgactaacggagtctacactaggggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacatttagaga 21124401  T
Q  312 ctattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||||||||||||||| || |||||  ||||||||||||| ||||||||||||||||||||    
T  21124400 ctattttgcaatttatctgtattcagagactaaagtgacgtctcctttcctattcagggac 21124340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 101 - 367
Target Start/End: Original strand, 22469432 - 22469693
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||||||||||| | |   ||||||||| |||||  |||||| || |||||||| ||| ||||||||||||| ||    | |||||  ||| | ||||    
T  22469432 aattagtcactttaatccctgaatgggaaaggagtagccactttcgttcctgaatgtagagaaattgcaaaacagtc----cctgaatgcagactctgtt 22469527  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
    ||||||||||||||| ||| ||||||||| |||| || |||||  ||||||||||||||| ||| | || ||||||||| |||||| ||||||||| |||    
T  22469528 ggtcaatttcagggattaaggtgactaacggagttta-attcagggactaaattgactaatggagtttgaattcagggattaaattgactaacagaatct 22469626  T
Q  301 acattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattca 367  Q
    |||||| || |||||||| |||||||| || ||| |||||||||||||||||||| |||| ||||||    
T  22469627 acattctggaactattttacaatttatctgcatttaaggactaaagtgacgactcatttcttattca 22469693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 202 - 372
Target Start/End: Original strand, 4289021 - 4289191
Alignment:
Q  202 gtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtcta 301  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||  | |||||||| || ||||||||| ||||||| |||||     
T  4289021 gtcaatttcagggattaaagtgactaacagagtctacattcaaagactaaattgattaacatagtctgcatttagagactaaattgactaacatagtctg 4289120  T
Q  302 cattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    | ||||  ||||||||||||| |||| || ||||  |||||||| |||||||| |||| ||||||| ||||    
T  4289121 cgttcaaagactattttgcaacttatctgcattcgtggactaaaatgacgacttcttttctattcaaggac 4289191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 246 - 365
Target Start/End: Original strand, 12106975 - 12107094
Alignment:
Q  246 gactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaa 345  Q
    ||||||| |||| |||| | ||| |||| ||||||||| |||| |||||||||||||||||||||| ||||||||||||||| || ||||||||||||||    
T  12106975 gactaaagtgacgaacgcagtctacatttagggactaatttaattaacagagtctacattcagggattattttgcaatttatctgcattcaaggactaaa 12107074  T
Q  346 gtgacgactcctttcctatt 365  Q
    ||||||||| ||||||||||    
T  12107075 gtgacgacttctttcctatt 12107094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 202 - 327
Target Start/End: Original strand, 41358778 - 41358903
Alignment:
Q  202 gtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtcta 301  Q
    ||||||||||| ||||||||||||||||| |||||||||||| |||| ||| | || ||   | |||||||||| |||||||||| | ||||||||||||    
T  41358778 gtcaatttcagagactaaagtgactaacaaagtctacattcagagacaaaagtaacaaataaagtctgcattcatggactaaattgattaacagagtcta 41358877  T
Q  302 cattcagggactattttgcaatttat 327  Q
    ||||||||||||||||||||||||||    
T  41358878 cattcagggactattttgcaatttat 41358903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 101 - 314
Target Start/End: Complemental strand, 21124639 - 21124430
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||||||||||||| ||  |||| |||| ||||| |||||||| | |||||||| ||| |||||||||||    || ||||||||| |||| | ||||    
T  21124639 aattagtcactttagttcttgaatgagaaaggagtagtcactttaattcctgaatgtagagaaattgcaaaa----cagtccttgaatgtagactctgtt 21124544  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
    ||||||||| | ||||||||||| ||||| ||||||||| |    ||||||||||||||||||| ||| || |  ||||||||||| ||||||  |||||    
T  21124543 ggtcaattttatggactaaagtggctaacggagtctacactaggggactaaattgactaacggagtctacactaggggactaaattgactaacgaagtct 21124444  T
Q  301 acattcagggacta 314  Q
     |||||||||||||    
T  21124443 gcattcagggacta 21124430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 236 - 372
Target Start/End: Complemental strand, 22426995 - 22426860
Alignment:
Q  236 tacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattc 335  Q
    ||||||||  ||| |||||||||||  ||  || ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| | | ||||    
T  22426995 tacattcagggaccaaattgactaaaagagactacattcagggactaaattgactaacagagactacattcagggactattttgcaattta-tcgcattc 22426897  T
Q  336 aaggactaaagtgacgactcctttcctattcagggac 372  Q
    | |||||||||||| ||||| ||||||||||||||||    
T  22426896 atggactaaagtgatgactcgtttcctattcagggac 22426860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 184 - 372
Target Start/End: Original strand, 24609104 - 24609292
Alignment:
Q  184 tgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaa 283  Q
    ||||| |||||| ||||||| | ||| || || ||||| ||||||  ||||||||||||| |||||||||| | |||| || |||||||| | | |||||    
T  24609104 tgaatgtagattatgttggtaatttttagagattaaagcgactaattgagtctacattcagagactaaattaattaacagagtctgcatttaagaactaa 24609203  T
Q  284 attaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||| |||||||||  |||||| || | |||||||| ||||||||||| ||||| | |||||||||| ||||||||||||||| ||||||    
T  24609204 attgactaacagaacctacatccaagaactattttacaatttatttgcattcaggaactaaagtgaagactcctttcctatttagggac 24609292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 96 - 279
Target Start/End: Original strand, 12106861 - 12107040
Alignment:
Q  96 tgggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagatt 195  Q
    |||| |||||||||||||||| |   ||||||||||||||| ||||||||||||||||||||||| |||||||||||    || ||| || || |||| |    
T  12106861 tggggaattagtcactttagtccctgaatgggaaatgagtagtcactttagtccctgaatgcagagaaattgcaaaa----cagtccctggatgtagact 12106956  T
Q  196 ttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcaggga 279  Q
     ||||||||||||||||||||||||||||| |||  |||||||||| |  |||||| || | |||| || ||| ||||||||||    
T  12106957 ctgttggtcaatttcagggactaaagtgacgaacgcagtctacatttagggactaatttaattaacagagtctacattcaggga 12107040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 180 - 369
Target Start/End: Original strand, 22326480 - 22326669
Alignment:
Q  180 tccttgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcaggga 279  Q
    ||||||||| |||| | | ||||||||||| |||||||||||||| |||| || ||||||||||   ||||||| | |||||| ||||||||||||| ||    
T  22326480 tccttgaatgtagactctattggtcaattttagggactaaagtgattaacggaatctacattcaggaactaaataggctaacgaaatctgcattcagaga 22326579  T
Q  280 ctaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagg 369  Q
    ||||||| | ||||| | |||| ||| | ||| |||||| |||||||| || ||||||||||||||||| || ||| | | |||||||||    
T  22326580 ctaaattgattaacaaaatctatatttaaggattattttacaatttatctgcattcaaggactaaagtggcgcctcatattctattcagg 22326669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 249 - 372
Target Start/End: Complemental strand, 21184434 - 21184312
Alignment:
Q  249 taaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtg 348  Q
    |||||||| ||||||| |||| |||||||||||||||| ||||| | ||| || ||||||||||||||||||||||||| || ||||  |||||| ||||    
T  21184434 taaattgattaacggagtctgtattcagggactaaattgactaata-agtttatattcagggactattttgcaatttatctgcattcggggactagagtg 21184336  T
Q  349 acgactcctttcctattcagggac 372  Q
    ||||||| ||||||||||||||||    
T  21184335 acgactcatttcctattcagggac 21184312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 180 - 314
Target Start/End: Complemental strand, 31254109 - 31253977
Alignment:
Q  180 tccttgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcaggga 279  Q
    ||||||||| |||| |  |||||| ||||||||||| |||||||||||||| | |||||||| |  |||||||||||||||| || ||||||||||||||    
T  31254109 tccttgaatgtagactccgttggttaatttcagggattaaagtgactaacaaaatctacatttagggactaaattgactaacagagtctgcattcaggga 31254010  T
Q  280 ctaaattaactaacagagtctacattcagggacta 314  Q
    ||||||| ||||||  |||||||||||| ||||||    
T  31254009 ctaaattgactaac--agtctacattcatggacta 31253977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 232 - 319
Target Start/End: Original strand, 29585576 - 29585663
Alignment:
Q  232 agtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttg 319  Q
    ||||||||||||  ||||||||||||||||  | ||||||||||||||||||||| | ||||| ||||||||||||||||||||||||    
T  29585576 agtctacattcagggactaaattgactaacaaagtctgcattcagggactaaattgaataacaaagtctacattcagggactattttg 29585663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 272 - 365
Target Start/End: Complemental strand, 23625147 - 23625054
Alignment:
Q  272 ttcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctatt 365  Q
    ||||||||||||||| || |||||||||| |||||||| |||||||| |||| |||||| ||||| |||||||||||| |||| ||||||||||    
T  23625147 ttcagggactaaattgaccaacagagtctgcattcaggtactattttacaatctatttgtattcagggactaaagtgatgactactttcctatt 23625054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 96 - 243
Target Start/End: Complemental strand, 21185947 - 21185804
Alignment:
Q  96 tgggaaattagtcactttagt-gctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagat 194  Q
    |||| |||||||||||||||| |||  |||| |||||||||| |||||||||||||||||||| ||||||||| ||||    |  ||| | ||| ||||     
T  21185947 tggggaattagtcactttagtcgctg-aatgagaaatgagtagtcactttagtccctgaatgctgaaaaattgaaaaa----cgttccctaaatatagac 21185853  T
Q  195 tttgttggtcaatttcagggactaaagtgactaacagagtctacattca 243  Q
    | ||||||||||||||| ||||||||||||||||| |||| ||||||||    
T  21185852 tctgttggtcaatttcatggactaaagtgactaactgagtgtacattca 21185804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 372
Target Start/End: Complemental strand, 12106970 - 12106880
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||| || |||||||||||||| |||||||| ||||||||||| | || ||||| ||||||||||||| |||| ||||| ||||||||||    
T  12106970 aaattgaccaacagagtctacatccagggactgttttgcaatttctctgcattcagggactaaagtgactactcatttcccattcagggac 12106880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 372
Target Start/End: Complemental strand, 25149341 - 25149251
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||| || ||||||||||||||||||||||| ||||||||||| |||| ||||| ||| ||||||||| |||| ||| | ||||||||||    
T  25149341 aaattgaccaacagagtctacattcagggactgttttgcaatttctttgcattcagggattaaagtgactactctttttccattcagggac 25149251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 359
Target Start/End: Complemental strand, 23976194 - 23976117
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactccttt 359  Q
    ||||| |||||||||||||||||||||||||| ||||||||||| | || ||||| | ||||||||||| ||| ||||    
T  23976194 aaattgactaacagagtctacattcagggactgttttgcaatttctctgcattcaggaactaaagtgactacttcttt 23976117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 21184290 - 21184369
Alignment:
Q  93 aaatgggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaa 172  Q
    |||||||||||||||||||||||| |   ||| ||||||||||  ||||| ||||||| ||||||||| |||||||||||    
T  21184290 aaatgggaaattagtcactttagtccctgaataggaaatgagtcgtcactctagtccccgaatgcagataaattgcaaaa 21184369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 37494339 - 37494390
Alignment:
Q  126 ggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatc 177  Q
    |||||| |||| ||||||||||||||||||||||| |||||| |||||||||    
T  37494339 ggaaataagtagtcactttagtccctgaatgcagagaaattgtaaaacaatc 37494390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 22426991 - 22426917
Alignment:
Q  208 ttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggacta 282  Q
    ||||||||| ||| ||||||| |||| |||||||||  |||||||||||||||| ||  || |||||||||||||    
T  22426991 ttcagggaccaaattgactaaaagagactacattcagggactaaattgactaacagagactacattcagggacta 22426917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 29585584 - 29585658
Alignment:
Q  208 ttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggacta 282  Q
    ||||||||||||| ||||||||| ||||| ||||||  ||||||||||| ||||  | ||| |||||||||||||    
T  29585584 ttcagggactaaattgactaacaaagtctgcattcagggactaaattgaataacaaagtctacattcagggacta 29585658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 371
Target Start/End: Complemental strand, 22469536 - 22469447
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcaggga 371  Q
    ||||| || |||||||||| |||||||||||| ||||||||||| | |  ||||| | || |||||| | |||||||||| |||||||||    
T  22469536 aaattgaccaacagagtctgcattcagggactgttttgcaatttctctacattcaggaacgaaagtggctactcctttcccattcaggga 22469447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 21124535 - 21124613
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttc 360  Q
    ||||| || ||||||||||||||||| ||||| ||||||||||| | |  ||||| | | ||||||||| |||||||||    
T  21124535 aaattgaccaacagagtctacattcaaggactgttttgcaatttctctacattcaggaattaaagtgactactcctttc 21124613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 23625157 - 23625112
Alignment:
Q  198 gttggtcaatttcagggactaaagtgactaacagagtctacattca 243  Q
    |||| |||||||||||||||||| |||| |||||||||| ||||||    
T  23625157 gttgatcaatttcagggactaaattgaccaacagagtctgcattca 23625112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 25149523 - 25149442
Alignment:
Q  96 tgggaaattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatc 177  Q
    ||||| ||||||||||||||| |   ||| ||||||||||  ||||| ||||| ||||||||||| ||| ||||||| ||||    
T  25149523 tgggagattagtcactttagtccctgaataggaaatgagtcgtcactatagtctctgaatgcagataaactgcaaaataatc 25149442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 37494422 - 37494467
Alignment:
Q  251 aattgactaacggaatctgcattcagggactaaattaactaacaga 296  Q
    |||||||||| | | ||||||||||||||||||||| |||||||||    
T  37494422 aattgactaatgaagtctgcattcagggactaaattgactaacaga 37494467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 350
Target Start/End: Original strand, 35202775 - 35202843
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgac 350  Q
    ||||| || ||||||||  ||||||||||||| ||||||||||| | || ||||| | |||||||||||    
T  35202775 aaattgaccaacagagtaaacattcagggactgttttgcaatttctctgcattcaggaactaaagtgac 35202843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 197 - 324
Target Start/End: Complemental strand, 314266 - 314139
Alignment:
Q  197 tgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacaga 296  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  314266 tgttggttaatttcagggactaaagtgactaacagactctacattcagggactaaattgactaacggagtctgcattcagggactaaattgactaacaga 314167  T
Q  297 gtctacattcagggactattttgcaatt 324  Q
    ||||||||| ||||||||||||||||||    
T  314166 gtctacatttagggactattttgcaatt 314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 195 - 360
Target Start/End: Complemental strand, 15555 - 15390
Alignment:
Q  195 tttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaaca 294  Q
    |||||| |||||||||||| ||||||  |||| ||||| |||||||||| ||||||||||| |||||||| ||| ||||||| || |||||| |||||||    
T  15555 tttgttagtcaatttcaggtactaaaacgactgacagaatctacattcagagactaaattggctaacggagtctacattcagagattaaattgactaaca 15456  T
Q  295 gagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttc 360  Q
    |||||||||||||| ||||||||| |||||||| || ||||||||||||||||||| |||| ||||    
T  15455 gagtctacattcagagactattttacaatttatctgcattcaaggactaaagtgacaactcatttc 15390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 83; Significance: 4e-39; HSPs: 6)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 208 - 350
Target Start/End: Original strand, 969 - 1111
Alignment:
Q  208 ttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattca 307  Q
    |||||||| |||| ||||||||  ||||| ||||||  ||||||||||||||||| ||||||||||||||||||||||| | ||| | ||||||| ||||    
T  969 ttcagggattaaattgactaacgaagtctgcattcagggactaaattgactaacgaaatctgcattcagggactaaattgaataataaagtctacgttca 1068  T
Q  308 gggactattttgcaatttatttgaattcaaggactaaagtgac 350  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  1069 gggactattttgtaatttatttgcattcaaggactaaagtgac 1111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 208 - 350
Target Start/End: Original strand, 7433 - 7575
Alignment:
Q  208 ttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattca 307  Q
    |||||||| |||| ||||||||  ||||| ||||||  ||||||||||||||||| ||||||||||||||||||||||| | ||| | ||||||| ||||    
T  7433 ttcagggattaaattgactaacgaagtctgcattcagggactaaattgactaacgaaatctgcattcagggactaaattgaataataaagtctacgttca 7532  T
Q  308 gggactattttgcaatttatttgaattcaaggactaaagtgac 350  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  7533 gggactattttgtaatttatttgcattcaaggactaaagtgac 7575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 138 - 314
Target Start/End: Original strand, 872 - 1043
Alignment:
Q  138 tcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtcta 237  Q
    ||||||||||||||||||||||| ||||||||||||| ||      ||||| |||| | | || ||||||||||||||||||||||||||||| ||||||    
T  872 tcactttagtccctgaatgcagagaaattgcaaaacagtcc-----tgaatgtagactctattagtcaatttcagggactaaagtgactaacaaagtcta 966  T
Q  238 cattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggacta 314  Q
    ||||||  || |||||||||||||| | ||||||||||||||||||||| ||||||  | ||| |||||||||||||    
T  967 cattcagggattaaattgactaacgaagtctgcattcagggactaaattgactaacgaaatctgcattcagggacta 1043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 138 - 314
Target Start/End: Original strand, 7336 - 7507
Alignment:
Q  138 tcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtcta 237  Q
    ||||||||||||||||||||||| ||||||||||||| ||      ||||| |||| | | || ||||||||||||||||||||||||||||| ||||||    
T  7336 tcactttagtccctgaatgcagagaaattgcaaaacagtcc-----tgaatgtagactctattagtcaatttcagggactaaagtgactaacaaagtcta 7430  T
Q  238 cattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggacta 314  Q
    ||||||  || |||||||||||||| | ||||||||||||||||||||| ||||||  | ||| |||||||||||||    
T  7431 cattcagggattaaattgactaacgaagtctgcattcagggactaaattgactaacgaaatctgcattcagggacta 7507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 350
Target Start/End: Complemental strand, 938 - 871
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgac 350  Q
    ||||| ||||| |||||||||||||||| ||| ||||||||||| | || ||||| |||||||||||||    
T  938 aaattgactaatagagtctacattcagg-actgttttgcaatttctctgcattcagggactaaagtgac 871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 350
Target Start/End: Complemental strand, 7402 - 7335
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgac 350  Q
    ||||| ||||| |||||||||||||||| ||| ||||||||||| | || ||||| |||||||||||||    
T  7402 aaattgactaatagagtctacattcagg-actgttttgcaatttctctgcattcagggactaaagtgac 7335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 101 - 369
Target Start/End: Original strand, 190177 - 190441
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    ||||||||| |||||| |   ||||||||| ||||| ||| ||||||| ||||||||||| ||||||||||||| ||  ||  ||||| |||| | ||||    
T  190177 aattagtcattttagtccctgaatgggaaaagagtagtcattttagtctctgaatgcagagaaattgcaaaacagtc--tc--tgaatgtagactctgtt 190272  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
    ||||||||||||||| |||| ||| ||||| ||| |||||| |  |||||||||||||||| || |||| ||||||| |||||||| ||||||| |||||    
T  190273 ggtcaatttcagggattaaattgattaacatagtttacatttagggactaaattgactaacagagtctgtattcaggaactaaattgactaacaaagtct 190372  T
Q  301 acattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagg 369  Q
      ||| ||  ||||||||||||||||| |  ||||| ||| |||||  |||| || ||| |||||||||    
T  190373 gtatttagaaactattttgcaatttatctacattcagggattaaaggaacgattctttttctattcagg 190441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 282 - 372
Target Start/End: Complemental strand, 190281 - 190191
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||| || |||||||||||||||||| |||| ||||||||||| | || |||||  ||||||| |||| |||| ||||| ||||||||||    
T  190281 aaattgaccaacagagtctacattcagagactgttttgcaatttctctgcattcagagactaaaatgactactcttttcccattcagggac 190191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 102 - 372
Target Start/End: Complemental strand, 57728 - 57462
Alignment:
Q  102 attagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttg 201  Q
    ||||||||||||||| |   |||  |||| ||||| |||||| ||| | | |||||||| ||||||||||||| |     ||||||  |||| | ||||     
T  57728 attagtcactttagttcctgaatcagaaaagagtagtcacttaagtactttaatgcagagaaattgcaaaacagtg----cttgaacgtagactctgtta 57633  T
Q  202 gtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtcta 301  Q
    |||||||||| ||| ||| ||||||||| ||||||| |||||  ||||||||||| ||||| | |||||||||||  ||||| || ||||||| ||| ||    
T  57632 gtcaatttcaaggattaatgtgactaactgagtctaaattcagggactaaattgattaacgaagtctgcattcagatactaagttgactaacatagtata 57533  T
Q  302 cattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||||||  |||||||| |||||||| || ||||| ||||||||||||  | | |||||||||||||||||    
T  57532 cattcagaaactatttttcaatttatctgcattcatggactaaagtgataatttctttcctattcagggac 57462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 102 - 372
Target Start/End: Complemental strand, 128083 - 127817
Alignment:
Q  102 attagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttg 201  Q
    ||||||||||||||| |   |||  |||| ||||| |||||| ||| | |||||||||| ||||||||||||| |     ||||||  |||| | ||||     
T  128083 attagtcactttagttcctgaatcagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtg----cttgaacgtagactctgtta 127988  T
Q  202 gtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtcta 301  Q
    |||||||||| ||| ||| ||||||||| ||||||| ||||   || |||||||| ||||| | |||||||||||  ||||| || ||||||| ||| ||    
T  127987 gtcaatttcaaggattaatgtgactaactgagtctaaattctgggattaaattgattaacgaagtctgcattcagatactaagttgactaacatagtata 127888  T
Q  302 cattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    |||||||  ||||||||||||||||| || ||||| ||||||||||||  | | |||||||||||||||||    
T  127887 cattcagaaactattttgcaatttatctgcattcatggactaaagtgataatttctttcctattcagggac 127817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 127980 - 128067
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagg 369  Q
    ||||| ||||||||||||||| |||| | ||| ||||||||||| | || ||||||| ||| ||||||| |||| ||||  |||||||    
T  127980 aaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattcaagtacttaagtgactactcttttctgattcagg 128067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300 (Bit Score: 57; Significance: 1e-23; HSPs: 4)
Name: scaffold1300
Description:

Target: scaffold1300; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 1629 - 1452
Alignment:
Q  102 attagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttg 201  Q
    ||||||||||||||| |   |||| |||| ||||| |||||| ||||| |||||||||| ||||||||||||| ||    ||||||  |||| | ||||     
T  1629 attagtcactttagttcctgaatgagaaaagagtagtcacttaagtccttgaatgcagagaaattgcaaaacagtc----cttgaacgtagactctgtta 1534  T
Q  202 gtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaa 283  Q
    |||||||||| ||| ||| ||||||||  |||||||||||||  ||||||||| ||||||| | ||||||||||| ||||||    
T  1533 gtcaatttcaaggattaatgtgactaattgagtctacattcagggactaaattaactaacgaagtctgcattcagagactaa 1452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 1526 - 1613
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagg 369  Q
    ||||| ||||||||||||||| |||| ||||| ||||||||||| | || ||||||||||| ||||||| |||| ||||  |||||||    
T  1526 aaattgactaacagagtctacgttcaaggactgttttgcaatttctctgcattcaaggacttaagtgactactcttttctcattcagg 1613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 1356 - 1427
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaa 172  Q
    |||||||||||||||| ||  ||| |||||| | |  |||||||||||||| |||||||| |||||||||||    
T  1356 aattagtcactttagtccttgaataggaaataaattatcactttagtccctaaatgcagataaattgcaaaa 1427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 1497 - 1453
Alignment:
Q  270 cattcagggactaaattaactaacagagtctacattcagggacta 314  Q
    ||||||||||||||||||||||||  ||||| ||||||| |||||    
T  1497 cattcagggactaaattaactaacgaagtctgcattcagagacta 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 56; Significance: 5e-23; HSPs: 4)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 108 - 256
Target Start/End: Original strand, 59711 - 59855
Alignment:
Q  108 cactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaat 207  Q
    ||||||||| |  |||||||||| | ||| ||||||||||||||||||||||| |||||||||||    ||  || ||||| |||| | |||| ||||||    
T  59711 cactttagtccctcaatgggaaaggtgtagtcactttagtccctgaatgcagagaaattgcaaaa----cagcccctgaatgtagactctgttagtcaat 59806  T
Q  208 ttcagggactaaagtgactaacagagtctacattcatagactaaattga 256  Q
    ||||||||||||| |||||||| |||||| ||||||  |||||||||||    
T  59807 ttcagggactaaattgactaacggagtctgcattcagggactaaattga 59855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 372
Target Start/End: Complemental strand, 59808 - 59718
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||| ||||||||||||||||||||||| || ||||||||||| | || ||||| ||||||||||||| || ||||||| ||| ||||||    
T  59808 aaattgactaacagagtctacattcaggggctgttttgcaatttctctgcattcagggactaaagtgactacacctttcccattgagggac 59718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 59813 - 59853
Alignment:
Q  246 gactaaattgactaacggaatctgcattcagggactaaatt 286  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  59813 gactaaattgactaacggagtctgcattcagggactaaatt 59853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 314
Target Start/End: Original strand, 59807 - 59849
Alignment:
Q  272 ttcagggactaaattaactaacagagtctacattcagggacta 314  Q
    ||||||||||||||| |||||| |||||| |||||||||||||    
T  59807 ttcagggactaaattgactaacggagtctgcattcagggacta 59849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 122 - 282
Target Start/End: Complemental strand, 11830 - 11676
Alignment:
Q  122 aatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgttggtcaatttcagggactaaag 221  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||||||| | ||    ||| |||  ||| | | || |||||||| |||||||||||    
T  11830 aatgggaaatgagtagtcgctttagtccctgaatgcagagaaattgcaaaatagtc----cttaaat--agactctcttagtcaattttagggactaaag 11737  T
Q  222 tgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggacta 282  Q
    ||||||||||| | |||||||| ||| ||||||| |||||  | ||| |||||||||||||    
T  11736 tgactaacagaatatacattcagagattaaattgcctaacatagtctacattcagggacta 11676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 246 - 368
Target Start/End: Complemental strand, 11744 - 11623
Alignment:
Q  246 gactaaattgactaacggaatctgcattcagggactaaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaa 345  Q
    ||||||| |||||||| |||| | ||||||| || ||||||  |||||| ||||||||||||||||||||||| |||||||| || |||  |||||||||    
T  11744 gactaaagtgactaacagaatatacattcagagattaaattgcctaacatagtctacattcagggactattttacaatttatctgcatt-taggactaaa 11646  T
Q  346 gtgacgactcctttcctattcag 368  Q
     | ||||||| ||||||||||||    
T  11645 ataacgactcatttcctattcag 11623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 101 - 372
Target Start/End: Original strand, 27488 - 27742
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaacaatcaatccttgaatttagattttgtt 200  Q
    |||||||||||||||| |   ||| | ||||||||| | ||||||| |||||||| | || ||||||||||||| ||    ||| ||| |||| | ||||    
T  27488 aattagtcactttagtccctgaatagaaaatgagtagttactttagcccctgaatacggagaaattgcaaaacagtct---ctt-aatgtagactctgtt 27583  T
Q  201 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacggaatctgcattcagggactaaattaactaacagagtct 300  Q
    ||||||||||| ||||||||||||| |||  ||||||||||||   | |||||||||||||||  | || ||||||||||||||||  |||             
T  27584 ggtcaatttcaaggactaaagtgacgaacgaagtctacattcaggaagtaaattgactaacggggtatgtattcagggactaaattggcta--------- 27674  T
Q  301 acattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
         | ||| ||||||||||||||||||| |||||  |||||||||||||||| |||||||| ||||||||    
T  27675 ----gcggggtctattttgcaatttatttgcattcatagactaaagtgacgactactttcctaatcagggac 27742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 282 - 372
Target Start/End: Complemental strand, 27592 - 27502
Alignment:
Q  282 aaattaactaacagagtctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||| || ||||||||||||||| || |||| ||||||||||| |  | ||||| || ||||||| || |||| ||| ||||||||||||    
T  27592 aaattgaccaacagagtctacattaagagactgttttgcaatttctccgtattcaggggctaaagtaactactcattttctattcagggac 27502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 7e-16; HSPs: 4)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 184 - 259
Target Start/End: Complemental strand, 72083 - 72008
Alignment:
Q  184 tgaatttagattttgttggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgacta 259  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||| ||| | ||||||  ||||||||||||||    
T  72083 tgaatgtagattttgatggtcaatttcagggactaaattgactaacaaagtttgcattcagggactaaattgacta 72008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 369
Target Start/End: Complemental strand, 71995 - 71924
Alignment:
Q  298 tctacattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagg 369  Q
    |||| ||||||||||||||||||||||||| || ||||| ||| |||||||||||| ||| ||||| |||||    
T  71995 tctatattcagggactattttgcaatttatctgcattcagggattaaagtgacgacccctatcctactcagg 71924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 372
Target Start/End: Original strand, 72106 - 72177
Alignment:
Q  301 acattcagggactattttgcaatttatttgaattcaaggactaaagtgacgactcctttcctattcagggac 372  Q
    ||||||||||||| ||||||||||| |    ||||| ||||||||||||| ||| |||||| ||||||||||    
T  72106 acattcagggactgttttgcaatttctgcacattcagggactaaagtgactacttctttcccattcagggac 72177  T

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Target: scaffold0018; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 174
Target Start/End: Complemental strand, 72191 - 72118
Alignment:
Q  101 aattagtcactttagtgctacaatgggaaatgagtactcactttagtccctgaatgcagaaaaattgcaaaaca 174  Q
    |||||||||||||||| |   |||||||||  |||| |||||||||||||||||||   | |||||||||||||    
T  72191 aattagtcactttagtccctgaatgggaaagaagtagtcactttagtccctgaatgtgcagaaattgcaaaaca 72118  T

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