View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21539_high_19 (Length: 221)
Name: NF21539_high_19
Description: NF21539
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21539_high_19 |
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Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 35708593 - 35708384
Alignment:
| Q |
1 |
tcccctaacccctttctctactccgctctcattcgcgcttacgctcgtaatggacccttccaccattccattcgtttatacacttccatgttaaataata |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
35708593 |
tcccctaacccctttctctactccgctctcattcgcgcttacgctcgtaatggacccttccaccattccattcgtttatacacttccatgttaaacaata |
35708494 |
T |
|
| Q |
101 |
acgtttctcctgtttctttcactttttcagctcttttttcgttgctaaacaatcctagcttgggatcacagcttcatcttcatgcattcttgtttggttt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35708493 |
acgtttctcctgtttctttcactttttcagctcttttttcgttgctaaagaatcctagcttgggatcacagcttcatcttcatgcattcttgtttggttt |
35708394 |
T |
|
| Q |
201 |
tgttgatgat |
210 |
Q |
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|||| ||||| |
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|
| T |
35708393 |
tgttaatgat |
35708384 |
T |
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