View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2153_low_16 (Length: 227)
Name: NF2153_low_16
Description: NF2153
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2153_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 19 - 213
Target Start/End: Original strand, 21840515 - 21840709
Alignment:
| Q |
19 |
attaacacatataattaaccaaaagaaaagaaagacaatatgtatatactaaccaaaatttggaagaagttaattgcacctgcacctctttaagatgtat |
118 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21840515 |
attaacacatataattaaccaaaagaaaagaaagacaatatatatttactaaccaaaatttggaagaagttaattgcacctgcacctctttaagatgtat |
21840614 |
T |
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| Q |
119 |
atgccgtacaattacacaaagaaactctgatacaaaacattttatgctgaaaagttgcatcatttcagtcccttattatctcttcgaatattctt |
213 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
21840615 |
atgccgtacaattacacacagaaactctgatacaaaacattttatgctgaaaagttgcatcatttcagtcccttattatctcttcgaattttctt |
21840709 |
T |
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