View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21545_high_1 (Length: 647)

Name: NF21545_high_1
Description: NF21545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21545_high_1
NF21545_high_1
[»] chr6 (19 HSPs)
chr6 (171-365)||(32574449-32574644)
chr6 (17-152)||(32573243-32573378)
chr6 (457-637)||(32574678-32574858)
chr6 (383-452)||(32458037-32458104)
chr6 (179-227)||(20845012-20845060)
chr6 (173-227)||(19759786-19759840)
chr6 (179-227)||(548927-548975)
chr6 (228-320)||(11426013-11426104)
chr6 (179-227)||(15128211-15128259)
chr6 (376-440)||(20845402-20845465)
chr6 (173-225)||(32457644-32457696)
chr6 (376-433)||(31705575-31705631)
chr6 (376-433)||(31804603-31804659)
chr6 (173-226)||(33194603-33194656)
chr6 (377-433)||(5146337-5146392)
chr6 (377-433)||(12481034-12481089)
chr6 (254-306)||(15128118-15128170)
chr6 (377-433)||(15589780-15589835)
chr6 (173-225)||(16913326-16913378)
[»] chr4 (31 HSPs)
chr4 (173-227)||(41486573-41486627)
chr4 (173-227)||(28588559-28588613)
chr4 (375-433)||(6408833-6408890)
chr4 (382-433)||(7579448-7579501)
chr4 (383-433)||(34668582-34668631)
chr4 (376-433)||(46716563-46716619)
chr4 (376-433)||(56250559-56250616)
chr4 (173-225)||(3169038-3169090)
chr4 (228-305)||(12519725-12519804)
chr4 (377-433)||(20887412-20887467)
chr4 (228-320)||(32189052-32189143)
chr4 (383-450)||(4634679-4634745)
chr4 (383-450)||(9662249-9662315)
chr4 (173-227)||(9661851-9661905)
chr4 (376-450)||(14542164-14542237)
chr4 (173-227)||(16991870-16991924)
chr4 (173-227)||(23067910-23067964)
chr4 (391-433)||(29576790-29576831)
chr4 (387-433)||(30416296-30416341)
chr4 (173-227)||(34115714-34115768)
chr4 (383-433)||(44374944-44374993)
chr4 (173-226)||(4959638-4959691)
chr4 (376-433)||(37431566-37431622)
chr4 (383-440)||(41486970-41487026)
chr4 (377-433)||(393929-393984)
chr4 (173-225)||(1646005-1646057)
chr4 (377-433)||(18502497-18502552)
chr4 (377-433)||(19745801-19745856)
chr4 (377-433)||(19793950-19794005)
chr4 (377-433)||(24100544-24100599)
chr4 (383-443)||(53903975-53904034)
[»] chr3 (32 HSPs)
chr3 (228-320)||(43839468-43839563)
chr3 (228-316)||(32237951-32238041)
chr3 (376-450)||(45664610-45664684)
chr3 (173-227)||(41882470-41882524)
chr3 (173-225)||(20201122-20201174)
chr3 (173-225)||(20203304-20203356)
chr3 (180-227)||(1220277-1220324)
chr3 (179-225)||(21803534-21803580)
chr3 (173-227)||(35501821-35501875)
chr3 (173-227)||(40462057-40462111)
chr3 (173-227)||(50519788-50519842)
chr3 (376-433)||(25111832-25111888)
chr3 (376-440)||(3961438-3961501)
chr3 (377-433)||(45047908-45047963)
chr3 (173-220)||(22286818-22286865)
chr3 (228-320)||(40365295-40365389)
chr3 (374-433)||(42167724-42167782)
chr3 (382-433)||(48652112-48652162)
chr3 (228-320)||(54240155-54240249)
chr3 (173-227)||(1165458-1165512)
chr3 (375-433)||(43839186-43839243)
chr3 (377-450)||(1074540-1074612)
chr3 (173-226)||(1806523-1806576)
chr3 (376-443)||(7869101-7869172)
chr3 (387-440)||(27831498-27831550)
chr3 (383-440)||(43030079-43030135)
chr3 (376-433)||(48401502-48401558)
chr3 (376-433)||(53155093-53155149)
chr3 (377-433)||(33637805-33637860)
chr3 (377-433)||(36623926-36623981)
chr3 (377-433)||(49627767-49627822)
chr3 (173-225)||(53426802-53426854)
[»] chr8 (33 HSPs)
chr8 (374-433)||(7281960-7282018)
chr8 (383-449)||(5328343-5328408)
chr8 (173-227)||(9992663-9992717)
chr8 (376-433)||(5457460-5457516)
chr8 (180-227)||(9270026-9270073)
chr8 (374-433)||(13570430-13570488)
chr8 (173-227)||(8054870-8054924)
chr8 (254-320)||(32412887-32412953)
chr8 (173-226)||(7269527-7269580)
chr8 (376-433)||(38545479-38545535)
chr8 (374-433)||(39067353-39067411)
chr8 (383-450)||(44295712-44295778)
chr8 (173-227)||(16937401-16937455)
chr8 (374-432)||(26673446-26673503)
chr8 (173-219)||(31874082-31874128)
chr8 (378-440)||(31874455-31874516)
chr8 (383-433)||(41996939-41996988)
chr8 (387-433)||(45310899-45310944)
chr8 (375-449)||(589001-589076)
chr8 (375-449)||(624846-624921)
chr8 (376-433)||(2234133-2234189)
chr8 (376-433)||(8054477-8054533)
chr8 (383-440)||(9993062-9993118)
chr8 (391-428)||(16644734-16644771)
chr8 (228-286)||(31147786-31147846)
chr8 (383-440)||(32413186-32413242)
chr8 (376-433)||(37613046-37613102)
chr8 (377-429)||(7579522-7579573)
chr8 (377-433)||(26912038-26912093)
chr8 (377-433)||(28296778-28296833)
chr8 (377-433)||(31202859-31202914)
chr8 (385-433)||(31712743-31712790)
chr8 (179-227)||(36545843-36545891)
[»] chr2 (28 HSPs)
chr2 (374-433)||(36868416-36868474)
chr2 (228-320)||(5930492-5930586)
chr2 (173-227)||(7640418-7640472)
chr2 (383-433)||(11931268-11931317)
chr2 (227-296)||(41842018-41842087)
chr2 (384-431)||(23256302-23256348)
chr2 (387-433)||(7581762-7581807)
chr2 (331-369)||(17056258-17056296)
chr2 (331-369)||(17068705-17068743)
chr2 (331-369)||(17074702-17074740)
chr2 (331-369)||(17095275-17095313)
chr2 (173-227)||(27191397-27191451)
chr2 (173-227)||(27841211-27841265)
chr2 (390-436)||(28413424-28413469)
chr2 (173-227)||(42105814-42105868)
chr2 (383-440)||(3390819-3390875)
chr2 (383-440)||(9207018-9207074)
chr2 (376-433)||(9689640-9689696)
chr2 (376-433)||(13113421-13113477)
chr2 (376-433)||(15920263-15920319)
chr2 (376-433)||(19904899-19904955)
chr2 (376-433)||(25622713-25622769)
chr2 (383-440)||(25771841-25771897)
chr2 (179-220)||(44167778-44167819)
chr2 (385-433)||(4878403-4878450)
chr2 (179-227)||(6089897-6089945)
chr2 (228-320)||(6089962-6090053)
chr2 (377-433)||(16136489-16136544)
[»] chr7 (27 HSPs)
chr7 (173-227)||(25855282-25855336)
chr7 (376-433)||(23732063-23732119)
chr7 (376-433)||(26017327-26017383)
chr7 (375-450)||(134797-134871)
chr7 (377-450)||(10574776-10574848)
chr7 (376-433)||(37399987-37400043)
chr7 (376-413)||(40016568-40016605)
chr7 (377-433)||(43847384-43847439)
chr7 (377-433)||(44482533-44482588)
chr7 (179-227)||(47749738-47749786)
chr7 (385-451)||(8319713-8319779)
chr7 (375-433)||(7986280-7986337)
chr7 (181-227)||(24470401-24470447)
chr7 (181-227)||(24475349-24475395)
chr7 (173-211)||(28015354-28015392)
chr7 (383-433)||(30992493-30992542)
chr7 (173-219)||(40775265-40775311)
chr7 (383-433)||(43806819-43806868)
chr7 (376-440)||(47750123-47750190)
chr7 (228-305)||(135111-135190)
chr7 (377-433)||(2623003-2623058)
chr7 (377-429)||(17508863-17508914)
chr7 (377-429)||(17544300-17544351)
chr7 (377-433)||(24319878-24319933)
chr7 (173-209)||(38649438-38649474)
chr7 (377-433)||(46025710-46025765)
chr7 (377-433)||(48304047-48304102)
[»] chr5 (20 HSPs)
chr5 (383-451)||(6886829-6886896)
chr5 (179-224)||(34893981-34894026)
chr5 (374-433)||(9196686-9196744)
chr5 (184-227)||(15710551-15710594)
chr5 (180-227)||(41988189-41988236)
chr5 (383-433)||(5378698-5378747)
chr5 (173-211)||(29310427-29310465)
chr5 (173-211)||(31645827-31645865)
chr5 (383-433)||(39308422-39308471)
chr5 (376-440)||(6281454-6281518)
chr5 (376-433)||(11734500-11734556)
chr5 (376-433)||(17218112-17218168)
chr5 (383-440)||(31646225-31646281)
chr5 (376-433)||(32309906-32309962)
chr5 (376-433)||(41358423-41358479)
chr5 (374-431)||(43415613-43415669)
chr5 (179-227)||(19646103-19646151)
chr5 (179-227)||(28618608-28618656)
chr5 (377-433)||(39179500-39179555)
chr5 (173-224)||(41358036-41358088)
[»] scaffold0090 (1 HSPs)
scaffold0090 (374-433)||(11223-11281)
[»] chr1 (23 HSPs)
chr1 (374-433)||(17347983-17348041)
chr1 (374-433)||(43504205-43504263)
chr1 (383-437)||(23257484-23257537)
chr1 (173-227)||(44562811-44562865)
chr1 (383-447)||(15276101-15276164)
chr1 (376-451)||(13999352-13999425)
chr1 (376-450)||(51418394-51418468)
chr1 (173-227)||(5832231-5832285)
chr1 (376-438)||(6212578-6212639)
chr1 (254-316)||(44562704-44562766)
chr1 (383-433)||(49652231-49652280)
chr1 (376-449)||(900440-900512)
chr1 (182-227)||(8893300-8893345)
chr1 (174-227)||(17579767-17579820)
chr1 (376-433)||(26771495-26771551)
chr1 (383-440)||(38644459-38644515)
chr1 (190-227)||(40992349-40992386)
chr1 (376-424)||(423956-424003)
chr1 (385-433)||(12967402-12967449)
chr1 (173-221)||(13691826-13691874)
chr1 (183-227)||(23320448-23320492)
chr1 (376-451)||(25032739-25032814)
chr1 (183-227)||(52752036-52752080)
[»] scaffold0157 (1 HSPs)
scaffold0157 (228-305)||(1107-1186)
[»] scaffold0536 (1 HSPs)
scaffold0536 (374-433)||(3303-3361)
[»] scaffold0722 (1 HSPs)
scaffold0722 (375-433)||(5195-5252)
[»] scaffold0321 (1 HSPs)
scaffold0321 (376-430)||(6787-6841)
[»] scaffold0045 (1 HSPs)
scaffold0045 (173-227)||(9710-9764)
[»] scaffold0432 (1 HSPs)
scaffold0432 (376-433)||(2103-2159)
[»] scaffold0312 (1 HSPs)
scaffold0312 (376-424)||(6546-6593)
[»] scaffold0024 (1 HSPs)
scaffold0024 (228-305)||(36598-36677)


Alignment Details
Target: chr6 (Bit Score: 136; Significance: 1e-70; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 171 - 365
Target Start/End: Original strand, 32574449 - 32574644
Alignment:
Q  171 gttttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttcccgattttcaaatctatttcacttttta-ttgtgatttcgtcatc 269  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||| ||    
T  32574449 gttttagagtcaatttttgacccaaaattaaccctctaactcgcttttctctttcccgatttttaaatctatttcactttttatttttgatttcgtcgtc 32574548  T
Q  270 ttaatgcgatgttggtttgttcatcgtattcgtgcggtattgtttgtttttgttcatgtatttgaatattgtcatatgtgtagacttttgcacttt 365  Q
    |||||||||||||||||||||||||||||| ||||||  || ||||||||||||||||||||||||||||||| |||| |||| || |||||||||    
T  32574549 ttaatgcgatgttggtttgttcatcgtatttgtgcggcgttttttgtttttgttcatgtatttgaatattgtcgtatgcgtaggctgttgcacttt 32574644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 32573243 - 32573378
Alignment:
Q  17 caccatcatgttgttgcatataacaacaagaccgacacccatgctactccccacccgcaaaggttacctccacacccaaggccaagccactactattacc 116  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32573243 caccatcatgttgttgcacataacaacaagaccaacacccatgctactccccacccgcaaaggttacccccacacccaaggccaagccactactattacc 32573342  T
Q  117 ccaacaagcccaacatacatgttaaatagcatggtc 152  Q
    ||||||||||||||||||||||||||||||||||||    
T  32573343 ccaacaagcccaacatacatgttaaatagcatggtc 32573378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 457 - 637
Target Start/End: Original strand, 32574678 - 32574858
Alignment:
Q  457 taaaacgcaacaacacttgttagcatttgtcaataattatctagttctaccctttaaggactattttaatttaannnnnnncaatcaagacaactcatca 556  Q
    |||||||| ||||||||||||| ||||| |||| ||||||| ||||||||  ||||||||||||||||||||||       |||||||||||||||||||    
T  32574678 taaaacgcgacaacacttgttatcatttctcaagaattatcaagttctacagtttaaggactattttaatttaatttttttcaatcaagacaactcatca 32574777  T
Q  557 atgtgaaaatatttcgtgtaacactatctctcagagttctcgatctcgatctcgctaattcgtcatttctcttgcttcatc 637  Q
    |||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32574778 atgtgaaaatattttgtgtaacaccatctcccagagttctcgatctcgatctcgctcattcgtcatttctcttgcttcatc 32574858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 32458037 - 32458104
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaagaataaaaaatt 452  Q
    |||||||||||  |||||||||||||||| ||||||||||| ||||||||| |||||| |||||||||||    
T  32458037 attatatcgatgcactttatcaatttaaa-tgaatgaatatgatttattttgtcaaaa-aataaaaaatt 32458104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 20845012 - 20845060
Alignment:
Q  179 gtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    |||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  20845012 gtcaatttttgacccaaaatcacccctctaactcgtttttctctttccc 20845060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 19759786 - 19759840
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| |||||||||||| ||||||| |||||||||||||| |||||| ||||||    
T  19759786 tttagggtcaatttttgacccaaaatcacccctctaactcgtttttctatttccc 19759840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 548975 - 548927
Alignment:
Q  179 gtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    |||||||||||| ||||||| |||||||||||||| |||||| ||||||    
T  548975 gtcaatttttgacccaaaatcacccctctaactcgtttttctttttccc 548927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 228 - 320
Target Start/End: Original strand, 11426013 - 11426104
Alignment:
Q  228 gattttcaaatctatttcactttttattgtgatttcgtcatcttaatgcgatgttggtttgttcatcgtattcgtgcggtattgtttgttttt 320  Q
    |||||||| |||||||||  ||| | ||||||||||||||||||  ||||||||||| |||||| |||| || |||||   ||||||||||||    
T  11426013 gattttcacatctatttcgttttattttgtgatttcgtcatcttcgtgcgatgttgg-ttgttcgtcgtctttgtgcgacgttgtttgttttt 11426104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 15128259 - 15128211
Alignment:
Q  179 gtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    |||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  15128259 gtcaatttttgtcccaaaatcacccctctaactcgtttttctctttccc 15128211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 376 - 440
Target Start/End: Original strand, 20845402 - 20845465
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaa 440  Q
    ||||| |||||||||||| |||| ||||||||| || |||||||||||| |||||||| ||||||    
T  20845402 aatttgtattatatcgatgtactatatcaatttgaa-tgaatgaatatcttttattttgtcaaaa 20845465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 32457644 - 32457696
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttc 225  Q
    ||||| |||||||||||| ||||||| |||| ||||||||| |||||||||||    
T  32457644 tttagcgtcaatttttgacccaaaatcacccatctaactcgtttttctctttc 32457696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 433
Target Start/End: Original strand, 31705575 - 31705631
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||| |||| ||||||| |||| ||||||||| ||||||||||||||| ||||||||    
T  31705575 aatttgtattgtatcgatgtactctatcaattt-aaatgaatgaatatcgtttatttt 31705631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 433
Target Start/End: Original strand, 31804603 - 31804659
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||| |||||||||||| |||| ||||||||| |||||||| |||||| ||||||||    
T  31804603 aatttttattatatcgatgtactctatcaattt-aaatgaataaatatcgtttatttt 31804659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 33194603 - 33194656
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttcc 226  Q
    ||||| |||||||||||||||||||| ||  |||||| ||| ||||||||||||    
T  33194603 tttagggtcaatttttgatccaaaatcacatctctaattcgtttttctctttcc 33194656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 433
Target Start/End: Original strand, 5146337 - 5146392
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||| |||||||||||| |||| |||||||||  |||||||||||||| ||||||||    
T  5146337 atttgtattatatcgatgtactctatcaattt-gaatgaatgaatatcgtttatttt 5146392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 433
Target Start/End: Complemental strand, 12481089 - 12481034
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||| |||| ||||||| ||||||||||||||  |||||||||||||| ||||||||    
T  12481089 atttgtattgtatcgatgtactttatcaattt-gaatgaatgaatatcgtttatttt 12481034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 15128170 - 15128118
Alignment:
Q  254 ttgtgatttcgtcatcttaatgcgatgttggtttgttcatcgtattcgtgcgg 306  Q
    ||||||||||||| ||||| ||||| |||||||||||| |||| || ||||||    
T  15128170 ttgtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtctttgtgcgg 15128118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 433
Target Start/End: Complemental strand, 15589835 - 15589780
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||| ||||||| |||| ||||||||| || |||||||||||| ||||||||    
T  15589835 atttatattgtatcgatgtactctatcaatttgaa-tgaatgaatatcgtttatttt 15589780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 16913326 - 16913378
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttc 225  Q
    ||||| |||||||||||| || |||| |||||||||||||| ||||| |||||    
T  16913326 tttagggtcaatttttgacccgaaatcacccctctaactcgtttttcactttc 16913378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 41486573 - 41486627
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| |||||||||||||||||||| |||||||||||||| |||||||||||||    
T  41486573 tttagggtcaatttttgatccaaaatcacccctctaactcgtttttctctttccc 41486627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 28588559 - 28588613
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| |||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  28588559 tttagggtcaatttttgacccaaaatcacccctctaactcgtttttctctttccc 28588613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 433
Target Start/End: Original strand, 6408833 - 6408890
Alignment:
Q  375 aaatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||||| ||||||||| || |||||| |||||||||| |||||||||||||||||||||    
T  6408833 aaatttttattatatcaatgtactttgtcaatttaaa-tgaatgaatatcatttatttt 6408890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 433
Target Start/End: Complemental strand, 7579501 - 7579448
Alignment:
Q  382 tattatatcgatatactttatcaatttaa--aatgaatgaatatcatttatttt 433  Q
    |||||||||||| ||||||||||||| ||  |||||||||||||||||||||||    
T  7579501 tattatatcgatgtactttatcaattgaatgaatgaatgaatatcatttatttt 7579448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 34668582 - 34668631
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||||||||    
T  34668582 attatatcgatgtactttatcaattt-aaatgaataaatatcatttatttt 34668631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 376 - 433
Target Start/End: Complemental strand, 46716619 - 46716563
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||||| ||||||||||| |||| ||||||||| || |||||||||||||||||||||    
T  46716619 aatttacattatatcgatgtactatatcaatttgaa-tgaatgaatatcatttatttt 46716563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 376 - 433
Target Start/End: Original strand, 56250559 - 56250616
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||| |||||||||||| |||||||||||||| |||| |||||||||  ||||||||    
T  56250559 aatttgtattatatcgatgtactttatcaattttaaataaatgaatattgtttatttt 56250616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 3169038 - 3169090
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttc 225  Q
    ||||||||||||| |||| ||||||| |||||||||||||| |||| ||||||    
T  3169038 tttagagtcaattattgacccaaaatcacccctctaactcgtttttttctttc 3169090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 228 - 305
Target Start/End: Original strand, 12519725 - 12519804
Alignment:
Q  228 gattttcaaatctatttcactttttatt--gtgatttcgtcatcttaatgcgatgttggtttgttcatcgtattcgtgcg 305  Q
    |||||||| ||||||||   ||||||||  ||||||||||| ||||| ||||| |||||||||||| ||||||| |||||    
T  12519725 gattttcacatctattttgttttttattttgtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtatttgtgcg 12519804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 433
Target Start/End: Complemental strand, 20887467 - 20887412
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||| ||||||| |||| ||||||||| ||||||||||||||| ||||||||    
T  20887467 atttatattgtatcgatgtactctatcaattt-aaatgaatgaatatcgtttatttt 20887412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 228 - 320
Target Start/End: Original strand, 32189052 - 32189143
Alignment:
Q  228 gattttcaaatctatttcactttttattgtgatttcgtcatcttaatgcgatgttggtttgttcatcgtattcgtgcggtattgtttgttttt 320  Q
    |||||||| |||||||||  ||||| ||||||||||||| ||||  ||||| |||||||||||| |||| || |||||   ||||||||||||    
T  32189052 gattttcacatctatttcgtttttt-ttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgttttt 32189143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 450
Target Start/End: Original strand, 4634679 - 4634745
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaagaataaaaaa 450  Q
    ||||||||||| |||| ||||||||| || |||||||||||| |||||||| |||||| || ||||||    
T  4634679 attatatcgatgtactctatcaatttgaa-tgaatgaatatcttttattttgtcaaaaaaaaaaaaaa 4634745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 450
Target Start/End: Original strand, 9662249 - 9662315
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaagaataaaaaa 450  Q
    ||||||||||| |||| ||||||||| || |||||||||||| |||||||| |||||| || ||||||    
T  9662249 attatatcgatgtactctatcaatttgaa-tgaatgaatatcttttattttgtcaaaaaaaaaaaaaa 9662315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 9661851 - 9661905
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| |||||||||||| ||||||| |||||||||||| | |||||| ||||||    
T  9661851 tttagggtcaatttttgacccaaaatcacccctctaacttgtttttctttttccc 9661905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 376 - 450
Target Start/End: Complemental strand, 14542237 - 14542164
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaagaataaaaaa 450  Q
    |||||| ||||||||||| || | ||||||||| || |||||||||||| |||||||| |||||| || ||||||    
T  14542237 aatttacattatatcgatgtattctatcaatttgaa-tgaatgaatatcttttattttgtcaaaaaaaaaaaaaa 14542164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 16991870 - 16991924
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| |||||||||||| ||||||| |||| ||||||||| |||||| ||||||    
T  16991870 tttagggtcaatttttgacccaaaatcacccatctaactcgtttttctatttccc 16991924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 23067964 - 23067910
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| |||||||||||| || |||| |||||||||||||| |||||| ||||||    
T  23067964 tttagggtcaatttttgaccctaaatcacccctctaactcgtttttctatttccc 23067910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 391 - 433
Target Start/End: Complemental strand, 29576831 - 29576790
Alignment:
Q  391 gatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||||||||||||||||| || |||||||||||||||||||||    
T  29576831 gatatactttatcaatttgaa-tgaatgaatatcatttatttt 29576790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 387 - 433
Target Start/End: Complemental strand, 30416341 - 30416296
Alignment:
Q  387 tatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||| |||| |||||||||||| |||||||||||||||||||||    
T  30416341 tatcgatgtactctatcaatttaaa-tgaatgaatatcatttatttt 30416296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 34115768 - 34115714
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| |||||||||||| ||||||| |||||||||  ||| |||||||||||||    
T  34115768 tttagggtcaatttttgacccaaaatcacccctctagttcgtttttctctttccc 34115714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 44374993 - 44374944
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||||| |||| ||||||||| || |||||||||||||||||||||    
T  44374993 attatatcgatgtactctatcaatttgaa-tgaatgaatatcatttatttt 44374944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 4959691 - 4959638
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttcc 226  Q
    ||||| |||||||||||||||||||| | | |||||||||  ||||||||||||    
T  4959691 tttagggtcaatttttgatccaaaatcatcactctaactcatttttctctttcc 4959638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 433
Target Start/End: Original strand, 37431566 - 37431622
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||| |||| |||||||||||| ||||||||||||| ||| ||||||| ||||||||    
T  37431566 aatttgtattgtatcgatatactctatcaatttaaaa-gaaagaatatcgtttatttt 37431622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 440
Target Start/End: Original strand, 41486970 - 41487026
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaa 440  Q
    ||||| ||||| |||| ||||||||| || |||||||||||| |||||||||||||||    
T  41486970 attatttcgatgtactctatcaatttgaa-tgaatgaatatcttttattttatcaaaa 41487026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 433
Target Start/End: Complemental strand, 393984 - 393929
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||| |||| ||||||| ||||||||||||||  |||||||||||||| ||||||||    
T  393984 atttgtattgtatcgatgtactttatcaattt-gaatgaatgaatatcgtttatttt 393929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 1646057 - 1646005
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttc 225  Q
    ||||| || |||| |||| ||||||| |||||||||||||| |||||||||||    
T  1646057 tttagggttaattgttgacccaaaatcacccctctaactcgtttttctctttc 1646005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 433
Target Start/End: Complemental strand, 18502552 - 18502497
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||| |||| ||||||| |||| |||||||||||| |||||||||||| ||||||||    
T  18502552 atttgtattgtatcgatgtactctatcaatttaaa-tgaatgaatatcgtttatttt 18502497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 433
Target Start/End: Original strand, 19745801 - 19745856
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||| |||| |||||||||||| ||||||||| |||||| |||||||| ||||||||    
T  19745801 atttgtattgtatcgatatactctatcaattt-aaatgattgaatatcgtttatttt 19745856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 433
Target Start/End: Complemental strand, 19794005 - 19793950
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||| |||| |||||||||||| ||||||||| |||||| |||||||| ||||||||    
T  19794005 atttgtattgtatcgatatactctatcaattt-aaatgattgaatatcgtttatttt 19793950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 433
Target Start/End: Original strand, 24100544 - 24100599
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||| |||| ||||||| |||| ||||||||| || |||||||||||||||||||||    
T  24100544 atttgtattgtatcgatgtactctatcaatttgaa-tgaatgaatatcatttatttt 24100599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 383 - 443
Target Start/End: Original strand, 53903975 - 53904034
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaagaa 443  Q
    ||||||||||| |||| | ||||||| || |||||||||||| |||||||| |||||||||    
T  53903975 attatatcgatgtactctttcaatttgaa-tgaatgaatatcttttattttgtcaaaagaa 53904034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 228 - 320
Target Start/End: Complemental strand, 43839563 - 43839468
Alignment:
Q  228 gattttcaaatctatttcactttttatt--gtgatttcgtcatcttaatgcgatgttggtttgttcatcgta-ttcgtgcggtattgtttgttttt 320  Q
    |||||||| |||||||||  ||||||||  ||||||||||||||||  |||||||||||||||||| ||||| || |||||  |||||||||||||    
T  43839563 gattttcacatctatttcgttttttattttgtgatttcgtcatcttcgtgcgatgttggtttgttcgtcgtattttgtgcgacattgtttgttttt 43839468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 316
Target Start/End: Complemental strand, 32238041 - 32237951
Alignment:
Q  228 gattttcaaatctatttcactttttatt--gtgatttcgtcatcttaatgcgatgttggtttgttcatcgtattcgtgcggtattgtttgt 316  Q
    |||||||| |||||||||| ||||||||  ||||||| ||||||||  |||||||||||||||||| |||| || ||||||  ||||||||    
T  32238041 gattttcatatctatttcattttttattttgtgattttgtcatctttgtgcgatgttggtttgttcgtcgtctttgtgcggcgttgtttgt 32237951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 376 - 450
Target Start/End: Original strand, 45664610 - 45664684
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcattta-ttttatcaaaagaataaaaaa 450  Q
    |||||| ||||||||||| |||| ||||||||| |||||||||||||||||||| ||||||||||| || ||||||    
T  45664610 aatttacattatatcgatgtactctatcaattt-aaatgaatgaatatcatttatttttatcaaaaaaaaaaaaaa 45664684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 41882524 - 41882470
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| |||||||||||| |||||||||||||||||||||| |||||| ||||||    
T  41882524 tttagggtcaatttttgacccaaaattacccctctaactcgtttttctatttccc 41882470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 20201174 - 20201122
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttc 225  Q
    ||||| |||||||||||| ||||||| |||||||||||||| |||||||||||    
T  20201174 tttagggtcaatttttgacccaaaatcacccctctaactcgtttttctctttc 20201122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 20203356 - 20203304
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttc 225  Q
    ||||| |||||||||||| ||||||| |||||||||||||| |||||||||||    
T  20203356 tttagggtcaatttttgacccaaaatcacccctctaactcgtttttctctttc 20203304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 1220324 - 1220277
Alignment:
Q  180 tcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    |||||||||||| |||||| |||||||||||||| |||||||||||||    
T  1220324 tcaatttttgattcaaaatcacccctctaactcgtttttctctttccc 1220277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 21803534 - 21803580
Alignment:
Q  179 gtcaatttttgatccaaaattacccctctaactcgcttttctctttc 225  Q
    |||||||||||| ||||||| |||||||||||||| |||||||||||    
T  21803534 gtcaatttttgacccaaaatcacccctctaactcgtttttctctttc 21803580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 35501875 - 35501821
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| || ||||||||| ||||||| |||||||||||||| |||||||||||||    
T  35501875 tttagggttaatttttgacccaaaatcacccctctaactcgtttttctctttccc 35501821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 40462111 - 40462057
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||||||||| |||||| ||||||| |||||||||||| | |||||||||||||    
T  40462111 tttagagtcaaattttgacccaaaatcacccctctaacttgtttttctctttccc 40462057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 50519788 - 50519842
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| |||||||||||| ||||||| |||||||||||||| |||||| ||||||    
T  50519788 tttagggtcaatttttgacccaaaatcacccctctaactcgtttttctatttccc 50519842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 376 - 433
Target Start/End: Complemental strand, 25111888 - 25111832
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||||||||||||||||| |||| ||| ||||| || |||||||||||||||||||||    
T  25111888 aatttatattatatcgatgtactctattaatttgaa-tgaatgaatatcatttatttt 25111832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 376 - 440
Target Start/End: Complemental strand, 3961501 - 3961438
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaa 440  Q
    ||||| |||| ||||||||||||||||||||||  ||| |||||||||| |||||||||| ||||    
T  3961501 aatttgtattgtatcgatatactttatcaattt-gaataaatgaatatcgtttattttataaaaa 3961438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 433
Target Start/End: Original strand, 45047908 - 45047963
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||| |||| |||||||||||| ||||||||| || |||||||||||||||||||||    
T  45047908 atttgtattgtatcgatatactctatcaatttgaa-tgaatgaatatcatttatttt 45047963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 22286865 - 22286818
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttct 220  Q
    ||||| |||||||||||| | |||||||||||||||||||| ||||||    
T  22286865 tttagggtcaatttttgacctaaaattacccctctaactcgtttttct 22286818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 320
Target Start/End: Original strand, 40365295 - 40365389
Alignment:
Q  228 gattttcaaatctatttcactttttatt--gtgatttcgtcatcttaatgcgatgttggtttgttcatcgtattcgtgcggtattgtttgttttt 320  Q
    |||||||| ||||||||   ||||||||  ||||||| ||||||||||||||| |||||||||||  |||| || || |||  ||||||||||||    
T  40365295 gattttcacatctattttgttttttattttgtgattttgtcatcttaatgcgacgttggtttgtttgtcgtctttgtacggcgttgtttgttttt 40365389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 433
Target Start/End: Complemental strand, 42167782 - 42167724
Alignment:
Q  374 taaatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||||||||||| ||||||||| || | ||||||| || |||||||||||||||||||||    
T  42167782 taaatttatattgtatcgatattctctgtcaatttgaa-tgaatgaatatcatttatttt 42167724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 433
Target Start/End: Complemental strand, 48652162 - 48652112
Alignment:
Q  382 tattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||| ||||||| |||||||||||||| || |||||||||||||||||||||    
T  48652162 tattgtatcgatgtactttatcaatttgaa-tgaatgaatatcatttatttt 48652112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 320
Target Start/End: Original strand, 54240155 - 54240249
Alignment:
Q  228 gattttcaaatctatttcactttttatt--gtgatttcgtcatcttaatgcgatgttggtttgttcatcgtattcgtgcggtattgtttgttttt 320  Q
    |||||||| |||||||||  ||||||||  ||||||||||| ||||  ||||| ||||||||||||  ||| || ||||| | ||||||||||||    
T  54240155 gattttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgacgtctttgtgcgatgttgtttgttttt 54240249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 1165512 - 1165458
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| |||||||||||| ||||||| |||||||||||| | |||||| ||||||    
T  1165512 tttagggtcaatttttgacccaaaatcacccctctaacttgtttttctttttccc 1165458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 375 - 433
Target Start/End: Complemental strand, 43839243 - 43839186
Alignment:
Q  375 aaatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||| ||||||||||| |||| |||||||||  |||||||||||||||| ||||||    
T  43839243 aaatttacattatatcgatgtactctatcaattt-gaatgaatgaatatcatctatttt 43839186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 450
Target Start/End: Complemental strand, 1074612 - 1074540
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaagaataaaaaa 450  Q
    |||| |||||||||||| |||| ||||||||| || |||||||||||| |||||||| | |||| || ||||||    
T  1074612 atttgtattatatcgatgtactctatcaatttgaa-tgaatgaatatcgtttattttgtaaaaaaaagaaaaaa 1074540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 1806576 - 1806523
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttcc 226  Q
    ||||| ||||||||||||||| |||| |||||||||| ||| ||||||| ||||    
T  1806576 tttagggtcaatttttgatcccaaatcacccctctaaatcgtttttctccttcc 1806523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 443
Target Start/End: Complemental strand, 7869172 - 7869101
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaa---aatgaatgaatatcattta-ttttatcaaaagaa 443  Q
    |||||||||| |||||||||||| ||||||||| |   ||||||| ||||||||||| |||| |||||||||    
T  7869172 aatttatattttatcgatatactctatcaatttgaatgaatgaatcaatatcatttagttttgtcaaaagaa 7869101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 440
Target Start/End: Original strand, 27831498 - 27831550
Alignment:
Q  387 tatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaa 440  Q
    ||||||| |||| |||||||||||| ||||| ||||||||||||||| ||||||    
T  27831498 tatcgatgtactctatcaatttaaa-tgaataaatatcatttattttgtcaaaa 27831550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 440
Target Start/End: Original strand, 43030079 - 43030135
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaa 440  Q
    ||||||||||| |||| ||||||||| || |||||||||||| |||||||| ||||||    
T  43030079 attatatcgatgtactctatcaatttgaa-tgaatgaatatcttttattttgtcaaaa 43030135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 433
Target Start/End: Original strand, 48401502 - 48401558
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||||||||| ||||||| |||| ||||||||| || |||||||||||| ||||||||    
T  48401502 aatttatattgtatcgatgtactctatcaatttgaa-tgaatgaatatcgtttatttt 48401558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 433
Target Start/End: Complemental strand, 53155149 - 53155093
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||| |||| ||||||| |||| |||||||||||| |||||||||||| ||||||||    
T  53155149 aatttgtattgtatcgatgtactctatcaatttaaa-tgaatgaatatcgtttatttt 53155093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 433
Target Start/End: Original strand, 33637805 - 33637860
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||| |||| ||||||| ||||||||||||||  |||||||||||||| ||||||||    
T  33637805 atttgtattgtatcgatgtactttatcaattt-gaatgaatgaatatcgtttatttt 33637860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 433
Target Start/End: Complemental strand, 36623981 - 36623926
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||| || |||| |||| ||||||||| || |||||||||||||||||||||    
T  36623981 atttatattgtaccgatgtactctatcaatttgaa-tgaatgaatatcatttatttt 36623926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 433
Target Start/End: Complemental strand, 49627822 - 49627767
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||| ||||||| |||| ||||||||| || |||||||||||| ||||||||    
T  49627822 atttatattgtatcgatgtactctatcaatttgaa-tgaatgaatatcgtttatttt 49627767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 53426802 - 53426854
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttc 225  Q
    ||||| |||||||||| |  |||||| |||||||||||||| |||||||||||    
T  53426802 tttagggtcaattttttacgcaaaatcacccctctaactcgtttttctctttc 53426854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 433
Target Start/End: Original strand, 7281960 - 7282018
Alignment:
Q  374 taaatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||||||||||||||||||| ||| || |||||||||||||||||| ||||||||    
T  7281960 taaatttatattatatcgatatactctat-aaattaaaatgaatgaatatcgtttatttt 7282018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 449
Target Start/End: Original strand, 5328343 - 5328408
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaagaataaaaa 449  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||||||||| |||||| || |||||    
T  5328343 attatatcgatgtactctatcaatttaaaa-gaatgaatatcatttattttgtcaaaaaaaaaaaaa 5328408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 9992663 - 9992717
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| |||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  9992663 tttagggtcaatttttgacccaaaatcacccctctaactcgtttttctctttccc 9992717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 376 - 433
Target Start/End: Original strand, 5457460 - 5457516
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||||||||||||||||| |||| |||||||||  |||||||||||||||||||||||    
T  5457460 aatttatattatatcgatgtactctatcaattt-gaatgaatgaatatcatttatttt 5457516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 9270026 - 9270073
Alignment:
Q  180 tcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  9270026 tcaatttttgacccaaaatcacccctctaactcgtttttctctttccc 9270073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 374 - 433
Target Start/End: Complemental strand, 13570488 - 13570430
Alignment:
Q  374 taaatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||| |||| |||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  13570488 taaatttgtattgtatcgatatactctatcaattt-aaatgaatgaatatcgtttatttt 13570430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 8054924 - 8054870
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| |||||||||||| ||||||||| |||||||||||| |||||| ||||||    
T  8054924 tttagggtcaatttttgacccaaaattatccctctaactcgtttttctatttccc 8054870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 320
Target Start/End: Original strand, 32412887 - 32412953
Alignment:
Q  254 ttgtgatttcgtcatcttaatgcgatgttggtttgttcatcgtattcgtgcggtattgtttgttttt 320  Q
    ||||||||||||| ||||  ||||| ||||||||||||||||| || ||||| | ||||||||||||    
T  32412887 ttgtgatttcgtcgtcttcgtgcgacgttggtttgttcatcgtctttgtgcgatgttgtttgttttt 32412953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 7269580 - 7269527
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttcc 226  Q
    |||||||||||||||||| || |||| |||| |||||||||||||| |||||||    
T  7269580 tttagagtcaatttttgaccctaaatcacccttctaactcgcttttttctttcc 7269527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 376 - 433
Target Start/End: Complemental strand, 38545535 - 38545479
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||||||||| |||||||||||| |||||||||  |||||||||||||| ||||||||    
T  38545535 aatttatattgtatcgatatactctatcaattt-gaatgaatgaatatcgtttatttt 38545479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 433
Target Start/End: Complemental strand, 39067411 - 39067353
Alignment:
Q  374 taaatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||| |||  |||||||||||| ||||||||||||| ||||||||||| ||||||||    
T  39067411 taaatttgtatagtatcgatatactctatcaatttaaaa-gaatgaatatcgtttatttt 39067353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 450
Target Start/End: Original strand, 44295712 - 44295778
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaagaataaaaaa 450  Q
    ||||||||||| |||| ||||||||| || |||||||||||| |||||||| |||||| || ||||||    
T  44295712 attatatcgatgtactctatcaatttgaa-tgaatgaatatcttttattttgtcaaaaaaaaaaaaaa 44295778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 16937455 - 16937401
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| |||||||||||||||||||| | |||||||||| | |||||| ||||||    
T  16937455 tttagggtcaatttttgatccaaaatcatccctctaacttgtttttctatttccc 16937401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 374 - 432
Target Start/End: Complemental strand, 26673503 - 26673446
Alignment:
Q  374 taaatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttattt 432  Q
    ||||||| |||  |||||||||||| ||||||||| ||||||||| |||||||||||||    
T  26673503 taaatttgtatcgtatcgatatactctatcaattt-aaatgaatggatatcatttattt 26673446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 31874082 - 31874128
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttc 219  Q
    ||||| |||||||||||| ||||||| |||||||||||||| |||||    
T  31874082 tttagggtcaatttttgacccaaaatcacccctctaactcgtttttc 31874128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 440
Target Start/End: Original strand, 31874455 - 31874516
Alignment:
Q  378 tttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaa 440  Q
    |||| ||||||||||| |||| ||||||||| || |||||||||||| |||||||| ||||||    
T  31874455 tttacattatatcgatgtactctatcaatttgaa-tgaatgaatatcttttattttgtcaaaa 31874516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 41996939 - 41996988
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||||| ||||  ||||||||||| |||||||||||||||||||||    
T  41996939 attatatcgatgtactcgatcaatttaaa-tgaatgaatatcatttatttt 41996988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 387 - 433
Target Start/End: Complemental strand, 45310944 - 45310899
Alignment:
Q  387 tatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||||    
T  45310944 tatcgatatactttatcaattt-gaatgaattaatatcatttatttt 45310899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 449
Target Start/End: Complemental strand, 589076 - 589001
Alignment:
Q  375 aaatttatattatatcgatatactttatcaatttaaaatgaatga--atatcatttattttatcaaaagaataaaaa 449  Q
    |||||| |||||||||||| || |||||||||||  |||||||||  ||||| |||||||| ||||||||| |||||    
T  589076 aaatttgtattatatcgatgtattttatcaattt-gaatgaatgaatatatcgtttattttgtcaaaagaaaaaaaa 589001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 449
Target Start/End: Original strand, 624846 - 624921
Alignment:
Q  375 aaatttatattatatcgatatactttatcaatttaaaatgaatga--atatcatttattttatcaaaagaataaaaa 449  Q
    |||||| |||||||||||| || |||||||||||  |||||||||  ||||| |||||||| ||||||||| |||||    
T  624846 aaatttgtattatatcgatgtattttatcaattt-gaatgaatgaatatatcgtttattttgtcaaaagaaaaaaaa 624921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 433
Target Start/End: Complemental strand, 2234189 - 2234133
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||| |||||||||||| |||| |||||||||  |||||||||||||| ||||||||    
T  2234189 aatttgtattatatcgatgtactctatcaattt-gaatgaatgaatatcgtttatttt 2234133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 433
Target Start/End: Complemental strand, 8054533 - 8054477
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||| |||||||||||| || | ||||||||| || |||||||||||||||||||||    
T  8054533 aatttgtattatatcgatgtattctatcaatttgaa-tgaatgaatatcatttatttt 8054477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 440
Target Start/End: Original strand, 9993062 - 9993118
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaa 440  Q
    ||||||||||| |||| ||||||||| || |||||||||||| |||||||| ||||||    
T  9993062 attatatcgatgtactctatcaatttgaa-tgaatgaatatcttttattttgtcaaaa 9993118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 16644734 - 16644771
Alignment:
Q  391 gatatactttatcaatttaaaatgaatgaatatcattt 428  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  16644734 gatatactctatcaatttgaaatgaatgaatatcattt 16644771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 31147846 - 31147786
Alignment:
Q  228 gattttcaaatctatttcactttttatt--gtgatttcgtcatcttaatgcgatgttggtt 286  Q
    |||||||| ||||||||| |||||||||  ||||||||||| ||||| ||||| |||||||    
T  31147846 gattttcacatctatttcgctttttattttgtgatttcgtcgtcttagtgcgaggttggtt 31147786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 440
Target Start/End: Original strand, 32413186 - 32413242
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaa 440  Q
    |||||||| || |||| ||||||||| || ||||||||||||||||||||||| ||||    
T  32413186 attatatcaatgtactctatcaatttgaa-tgaatgaatatcatttattttataaaaa 32413242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 433
Target Start/End: Original strand, 37613046 - 37613102
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||| |||| |||||||||||| |||||||||  |||||||||||||| ||||||||    
T  37613046 aatttgtattgtatcgatatactctatcaattt-gaatgaatgaatatcgtttatttt 37613102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 429
Target Start/End: Complemental strand, 7579573 - 7579522
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcattta 429  Q
    ||||||||| ||||||| |||| ||||||||| || |||||||||||||||||    
T  7579573 atttatattgtatcgatgtactctatcaatttgaa-tgaatgaatatcattta 7579522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 433
Target Start/End: Original strand, 26912038 - 26912093
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||| ||| | | |||||||||||||||||| ||||||||||| ||||||||    
T  26912038 atttatattgtattgttgtactttatcaatttaaaa-gaatgaatatcgtttatttt 26912093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 433
Target Start/End: Complemental strand, 28296833 - 28296778
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||| |||| ||||||| |||| ||||||||| || |||||||||||||||||||||    
T  28296833 atttgtattgtatcgatgtactctatcaatttgaa-tgaatgaatatcatttatttt 28296778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 433
Target Start/End: Original strand, 31202859 - 31202914
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||| |||||||||||| |||| |||||||||  |||||||||||||| ||||||||    
T  31202859 atttgtattatatcgatgtactctatcaattt-gaatgaatgaatatcgtttatttt 31202914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 385 - 433
Target Start/End: Complemental strand, 31712790 - 31712743
Alignment:
Q  385 tatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||| |||| ||||||||| || |||||||||||||||||||||    
T  31712790 tatatcgatgtactctatcaatttgaa-tgaatgaatatcatttatttt 31712743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 36545891 - 36545843
Alignment:
Q  179 gtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    |||||||| ||| |||| || |||||||||||||| |||||||||||||    
T  36545891 gtcaatttgtgacccaatatcacccctctaactcgtttttctctttccc 36545843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 433
Target Start/End: Original strand, 36868416 - 36868474
Alignment:
Q  374 taaatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||||||||||||||||||| |||||||||  |||||||||||||| ||||||||    
T  36868416 taaatttatattatatcgatatactctatcaattt-gaatgaatgaatatcgtttatttt 36868474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 228 - 320
Target Start/End: Original strand, 5930492 - 5930586
Alignment:
Q  228 gattttcaaatctatttcactttttatt--gtgatttcgtcatcttaatgcgatgttggtttgttcatcgtattcgtgcggtattgtttgttttt 320  Q
    |||||||| |||||||||  ||||||||  ||||||||||| ||||  |||||||||||||||||| |||| || |||||   ||||||||||||    
T  5930492 gattttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgatgttggtttgttcgtcgtttttgtgcgacgttgtttgttttt 5930586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 7640472 - 7640418
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| |||||||||||| ||||||| |||||||||||||| |||||| ||||||    
T  7640472 tttagggtcaatttttgacccaaaatcacccctctaactcgtttttctatttccc 7640418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 11931268 - 11931317
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||    
T  11931268 attatatcgatgtactttatcaatttgaa-tgaatgaatatcatttatttt 11931317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 41842018 - 41842087
Alignment:
Q  227 cgattttcaaatctatttcactttttattgtgatttcgtcatcttaatgcgatgttggtttgttcatcgt 296  Q
    ||||||||| |||||||||  || || ||||||||||||| ||||| ||||| |||||||||||| ||||    
T  41842018 cgattttcacatctatttcgtttctttttgtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgt 41842087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 23256348 - 23256302
Alignment:
Q  384 ttatatcgatatactttatcaatttaaaatgaatgaatatcatttatt 431  Q
    |||||||||||||| |||||||||| || |||||||||||||||||||    
T  23256348 ttatatcgatataccttatcaatttgaa-tgaatgaatatcatttatt 23256302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 387 - 433
Target Start/End: Complemental strand, 7581807 - 7581762
Alignment:
Q  387 tatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||||    
T  7581807 tatcgatatactttatcaattt-gaatgaataaatatcatttatttt 7581762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 369
Target Start/End: Complemental strand, 17056296 - 17056258
Alignment:
Q  331 ttgaatattgtcatatgtgtagacttttgcactttgccg 369  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  17056296 ttgaatatagtcatatgtgtagacttttgtactttgccg 17056258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 369
Target Start/End: Complemental strand, 17068743 - 17068705
Alignment:
Q  331 ttgaatattgtcatatgtgtagacttttgcactttgccg 369  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  17068743 ttgaatatagtcatatgtgtagacttttgtactttgccg 17068705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 369
Target Start/End: Complemental strand, 17074740 - 17074702
Alignment:
Q  331 ttgaatattgtcatatgtgtagacttttgcactttgccg 369  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  17074740 ttgaatatagtcatatgtgtagacttttgtactttgccg 17074702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 369
Target Start/End: Complemental strand, 17095313 - 17095275
Alignment:
Q  331 ttgaatattgtcatatgtgtagacttttgcactttgccg 369  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  17095313 ttgaatatagtcatatgtgtagacttttgtactttgccg 17095275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 27191451 - 27191397
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| |||||||||||| || |||| |||||||||||||| |||||| ||||||    
T  27191451 tttagggtcaatttttgaccctaaatcacccctctaactcgtttttctatttccc 27191397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 27841265 - 27841211
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| |||||||||||| || |||| |||||||||||||| |||||| ||||||    
T  27841265 tttagggtcaatttttgaccctaaatcacccctctaactcgtttttctatttccc 27841211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 436
Target Start/End: Complemental strand, 28413469 - 28413424
Alignment:
Q  390 cgatatactttatcaatttaaaatgaatgaatatcatttattttatc 436  Q
    |||||||||||||||| ||||| | ||||||||||||||||||||||    
T  28413469 cgatatactttatcaacttaaa-tcaatgaatatcatttattttatc 28413424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 42105868 - 42105814
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| |||||||||||| ||||||| ||| |||||||||| |||||| ||||||    
T  42105868 tttagggtcaatttttgacccaaaatcaccactctaactcgtttttctatttccc 42105814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 440
Target Start/End: Original strand, 3390819 - 3390875
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaa 440  Q
    ||||||||||| |||| ||||||||| || |||||||||||| |||||||| ||||||    
T  3390819 attatatcgatgtactctatcaatttgaa-tgaatgaatatcttttattttttcaaaa 3390875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 440
Target Start/End: Complemental strand, 9207074 - 9207018
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaa 440  Q
    ||||||||||| |||| |||||||| ||| ||||||||| ||||||||||| ||||||    
T  9207074 attatatcgatgtactctatcaattcaaa-tgaatgaatgtcatttattttgtcaaaa 9207018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 433
Target Start/End: Complemental strand, 9689696 - 9689640
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||| |||||||||||| |||| ||||||||| ||||||||| ||||| ||||||||    
T  9689696 aatttgtattatatcgatgtactctatcaattt-aaatgaatgtatatcgtttatttt 9689640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 433
Target Start/End: Original strand, 13113421 - 13113477
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||||||||||||||||| || | ||||||||| |||||||| |||||| ||||||||    
T  13113421 aatttatattatatcgatgtattctatcaattt-aaatgaataaatatcgtttatttt 13113477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 433
Target Start/End: Original strand, 15920263 - 15920319
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||| |||| ||||||| |||| ||||||||| || |||||||||||||||||||||    
T  15920263 aatttgtattgtatcgatgtactctatcaatttgaa-tgaatgaatatcatttatttt 15920319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 433
Target Start/End: Original strand, 19904899 - 19904955
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||| |||||||||||| |||| ||||||||| |||||||||||||| | |||||||    
T  19904899 aatttgtattatatcgatgtactatatcaattt-aaatgaatgaatattaattatttt 19904955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 433
Target Start/End: Complemental strand, 25622769 - 25622713
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||||| ||| ||||||| |||| |||||||||||| ||||||||| |||||||||||    
T  25622769 aatttacattgtatcgatgtactctatcaatttaaa-tgaatgaatgtcatttatttt 25622713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 440
Target Start/End: Original strand, 25771841 - 25771897
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaa 440  Q
    ||||||||||| |||| ||||||||| || |||||||||||| |||||||| ||||||    
T  25771841 attatatcgatgtactctatcaatttgaa-tgaatgaatatcttttattttgtcaaaa 25771897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 44167819 - 44167778
Alignment:
Q  179 gtcaatttttgatccaaaattacccctctaactcgcttttct 220  Q
    |||||||||||| ||||||| |||||||||||||| ||||||    
T  44167819 gtcaatttttgacccaaaatcacccctctaactcgtttttct 44167778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 385 - 433
Target Start/End: Complemental strand, 4878450 - 4878403
Alignment:
Q  385 tatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||| |||| ||||||||| || |||||||||||||||||||||    
T  4878450 tatatcgatgtactctatcaatttgaa-tgaatgaatatcatttatttt 4878403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 6089897 - 6089945
Alignment:
Q  179 gtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    |||||||||||| ||||||| |||||||||| ||| |||||| ||||||    
T  6089897 gtcaatttttgacccaaaatcacccctctaattcgtttttctatttccc 6089945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 228 - 320
Target Start/End: Original strand, 6089962 - 6090053
Alignment:
Q  228 gattttcaaatctatttcactttttattgtgatttcgtcatcttaatgcgatgttggtttgttcatcgtattcgtgcggtattgtttgttttt 320  Q
    |||||||| |||||||||  ||| | ||||||||||||| ||||  ||||||||||| ||||||||| | || |||||   ||||||||||||    
T  6089962 gattttcacatctatttcgttttattttgtgatttcgtcgtcttcgtgcgatgttgg-ttgttcatcttctttgtgcgacgttgtttgttttt 6090053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 433
Target Start/End: Original strand, 16136489 - 16136544
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||| |||||||||||| |||| |||||||||  |||||||||||||| ||||||||    
T  16136489 atttgtattatatcgatgtactctatcaattt-gaatgaatgaatatcgtttatttt 16136544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000001; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 25855336 - 25855282
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| |||||||||||||||||||| | |||||||||||| |||||||||||||    
T  25855336 tttagggtcaatttttgatccaaaatcatccctctaactcgtttttctctttccc 25855282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 376 - 433
Target Start/End: Complemental strand, 23732119 - 23732063
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||    
T  23732119 aatttacattatatcaatgtactttatcaatttaaa-tgaatgaatatcatttatttt 23732063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 376 - 433
Target Start/End: Complemental strand, 26017383 - 26017327
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||||||||||||||||| |||| |||||||||  |||||||||||||||||||||||    
T  26017383 aatttatattatatcgatgtactctatcaattt-gaatgaatgaatatcatttatttt 26017327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 375 - 450
Target Start/End: Complemental strand, 134871 - 134797
Alignment:
Q  375 aaatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaagaataaaaaa 450  Q
    ||||||| ||||||||||| |||| ||||||||| || |||||||||||| |||||||| | |||| |||||||||    
T  134871 aaatttacattatatcgatgtactctatcaatttgaa-tgaatgaatatcttttattttgttaaaaaaataaaaaa 134797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 377 - 450
Target Start/End: Original strand, 10574776 - 10574848
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaagaataaaaaa 450  Q
    ||||||||| ||| ||| |||| ||||||||| || ||||||||||||||||||||| |||||| || ||||||    
T  10574776 atttatattgtattgatgtactctatcaatttgaa-tgaatgaatatcatttattttgtcaaaaaaaaaaaaaa 10574848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 376 - 433
Target Start/End: Original strand, 37399987 - 37400043
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||||| |||||||||||||||| |||||||||  ||||||||||||| |||||||||    
T  37399987 aatttacattatatcgatatactctatcaattt-gaatgaatgaatataatttatttt 37400043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 376 - 413
Target Start/End: Complemental strand, 40016605 - 40016568
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaat 413  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  40016605 aatttgtattatatcgatatactttatcaatttaaaat 40016568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 433
Target Start/End: Original strand, 43847384 - 43847439
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||| |||| |||||||||||| ||||||||| || |||||||||||||||||||||    
T  43847384 atttgtattgtatcgatatactctatcaatttgaa-tgaatgaatatcatttatttt 43847439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 433
Target Start/End: Complemental strand, 44482588 - 44482533
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||||||||||| |||| |||||||||  |||||||||||||| ||||||||    
T  44482588 atttatattatatcgatgtactctatcaattt-gaatgaatgaatatcgtttatttt 44482533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 47749738 - 47749786
Alignment:
Q  179 gtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    |||||||||||| ||||||| ||||||||| |||| |||||||||||||    
T  47749738 gtcaatttttgacccaaaatcacccctctatctcgtttttctctttccc 47749786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 451
Target Start/End: Original strand, 8319713 - 8319779
Alignment:
Q  385 tatatcgatatactttatcaatttaaaatgaatgaatatcattt-attttatcaaaagaataaaaaat 451  Q
    ||||||||| |||| |||||||||||| ||||||||||||||||  |||| |||||| ||||||||||    
T  8319713 tatatcgatgtactctatcaatttaaa-tgaatgaatatcatttgtttttgtcaaaaaaataaaaaat 8319779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 375 - 433
Target Start/End: Original strand, 7986280 - 7986337
Alignment:
Q  375 aaatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||||| |||||||||||| |||| |||||||||  |||||||||||||| ||||||||    
T  7986280 aaatttgtattatatcgatctactctatcaattt-gaatgaatgaatatcttttatttt 7986337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 24470401 - 24470447
Alignment:
Q  181 caatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    |||||||||| ||||||| |||||||||||||| |||||| ||||||    
T  24470401 caatttttgacccaaaatcacccctctaactcgtttttctatttccc 24470447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 24475349 - 24475395
Alignment:
Q  181 caatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    |||||||||| ||||||| |||||||||||||| |||||| ||||||    
T  24475349 caatttttgacccaaaatcacccctctaactcgtttttctatttccc 24475395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 28015354 - 28015392
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaact 211  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  28015354 tttagggtcaatttttgatccaaaatcacccctctaact 28015392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 30992542 - 30992493
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||||| |||| ||||||||| || |||||||||||||||||||||    
T  30992542 attatatcgatgtactctatcaatttgaa-tgaatgaatatcatttatttt 30992493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 40775265 - 40775311
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttc 219  Q
    ||||| |||||||||||||||||||| |||||| ||||||| |||||    
T  40775265 tttagggtcaatttttgatccaaaatcacccctataactcgtttttc 40775311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 43806868 - 43806819
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||||| |||| ||||||||| |||||||||||||| |||||||||    
T  43806868 attatatcgatgtactctatcaattt-aaatgaatgaatataatttatttt 43806819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 440
Target Start/End: Original strand, 47750123 - 47750190
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaa---atgaatgaatatcatttattttatcaaaa 440  Q
    |||||| ||||||||||| |||| ||||||||| ||   ||||||||||||| |||||||| ||||||    
T  47750123 aatttacattatatcgatgtactctatcaatttgaatgaatgaatgaatatcttttattttgtcaaaa 47750190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 135190 - 135111
Alignment:
Q  228 gattttcaaatctatttcactttttatt--gtgatttcgtcatcttaatgcgatgttggtttgttcatcgtattcgtgcg 305  Q
    |||||||| |||||||||| ||| ||||  ||||||||||| ||||  ||||| |||||||||||| |||| || |||||    
T  135190 gattttcacatctatttcattttgtattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtttttgtgcg 135111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 433
Target Start/End: Original strand, 2623003 - 2623058
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||||||| ||| |||| |||||||||  |||||||||||||| ||||||||    
T  2623003 atttatattatatagatgtactctatcaattt-gaatgaatgaatatcgtttatttt 2623058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 429
Target Start/End: Complemental strand, 17508914 - 17508863
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcattta 429  Q
    |||| |||| ||||||| |||| ||||||||||||| ||||||||||||||||    
T  17508914 atttgtattgtatcgatgtactctatcaatttaaaa-gaatgaatatcattta 17508863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 429
Target Start/End: Original strand, 17544300 - 17544351
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcattta 429  Q
    |||| |||| ||||||| |||| ||||||||||||| ||||||||||||||||    
T  17544300 atttgtattgtatcgatgtactctatcaatttaaaa-gaatgaatatcattta 17544351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 433
Target Start/End: Complemental strand, 24319933 - 24319878
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||| |||| ||||||| |||| |||||||||||| |||||||||||| ||||||||    
T  24319933 atttgtattgtatcgatgtactctatcaatttaaa-tgaatgaatatcgtttatttt 24319878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 38649474 - 38649438
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaa 209  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  38649474 tttagagtcaatttttgacccaaaatcacccctctaa 38649438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 433
Target Start/End: Complemental strand, 46025765 - 46025710
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||| |||| ||||||| ||||||||||||||  |||||||||||||| ||||||||    
T  46025765 atttgtattgtatcgatgtactttatcaattt-gaatgaatgaatatcgtttatttt 46025710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 433
Target Start/End: Complemental strand, 48304102 - 48304047
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||| |||| ||||||| ||||||||||||||  |||||||||||||| ||||||||    
T  48304102 atttgtattgtatcgatgtactttatcaattt-gaatgaatgaatatcgtttatttt 48304047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000002; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 383 - 451
Target Start/End: Complemental strand, 6886896 - 6886829
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaagaataaaaaat 451  Q
    ||||||||||| |||| |||||||||||| |||||||||||| |||||||| |||||| || |||||||    
T  6886896 attatatcgatgtactctatcaatttaaa-tgaatgaatatcttttattttgtcaaaaaaaaaaaaaat 6886829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 34894026 - 34893981
Alignment:
Q  179 gtcaatttttgatccaaaattacccctctaactcgcttttctcttt 224  Q
    |||||||||||| ||||||| |||||||||||||| ||||||||||    
T  34894026 gtcaatttttgacccaaaatcacccctctaactcgtttttctcttt 34893981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 433
Target Start/End: Complemental strand, 9196744 - 9196686
Alignment:
Q  374 taaatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||||||||||| || |||| |||||||||  |||||||||||||| ||||||||    
T  9196744 taaatttatattatatcaatgtactctatcaattt-gaatgaatgaatatcgtttatttt 9196686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 15710551 - 15710594
Alignment:
Q  184 tttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||    
T  15710551 ttttttatccaaaatcacccctctaactcgtttttctctttccc 15710594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 41988189 - 41988236
Alignment:
Q  180 tcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    |||||||||||| ||||||  ||||||||||||| |||||||||||||    
T  41988189 tcaatttttgattcaaaatcgcccctctaactcgtttttctctttccc 41988236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 5378698 - 5378747
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||||| |||| ||||||||| || |||||||||||||||||||||    
T  5378698 attatatcgatgtactctatcaatttgaa-tgaatgaatatcatttatttt 5378747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 29310465 - 29310427
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaact 211  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  29310465 tttagggtcaatttttgatccaaaatcacccctctaact 29310427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 31645827 - 31645865
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaact 211  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  31645827 tttagggtcaatttttgatccaaaatcacccctctaact 31645865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 39308471 - 39308422
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||||| ||||||||||| || || |||||||||||||||||||||    
T  39308471 attatatcgatgtactttatcaaattgaa-tgaatgaatatcatttatttt 39308422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 440
Target Start/End: Original strand, 6281454 - 6281518
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcattta-ttttatcaaaa 440  Q
    ||||| |||| |||||||||||| |||||||||  |||||||||||||| |||| |||||||||||    
T  6281454 aatttgtattgtatcgatatactctatcaattt-gaatgaatgaatatcgtttacttttatcaaaa 6281518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 433
Target Start/End: Complemental strand, 11734556 - 11734500
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||| |||| ||||||| ||||||||||||||  |||||||||||||| ||||||||    
T  11734556 aatttgtattgtatcgatgtactttatcaattt-gaatgaatgaatatcgtttatttt 11734500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 433
Target Start/End: Original strand, 17218112 - 17218168
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||| |||| ||||||| |||| ||||||||| || |||||||||||||||||||||    
T  17218112 aatttttattgtatcgatgtactctatcaatttgaa-tgaatgaatatcatttatttt 17218168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 440
Target Start/End: Original strand, 31646225 - 31646281
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaa 440  Q
    ||||||||||| |||| ||||||||| || |||||||||||| |||||||| ||||||    
T  31646225 attatatcgatgtactctatcaatttgaa-tgaatgaatatcttttattttgtcaaaa 31646281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 433
Target Start/End: Original strand, 32309906 - 32309962
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||||||||||||||||| |||| |||||||||  ||||||| |||||| ||||||||    
T  32309906 aatttatattatatcgatgtactctatcaattt-gaatgaatcaatatcgtttatttt 32309962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 433
Target Start/End: Original strand, 41358423 - 41358479
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||||| ||||||||||| |||| |||||||||  ||||||||||||||||| |||||    
T  41358423 aatttacattatatcgatgtactctatcaattt-gaatgaatgaatatcattcatttt 41358479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 431
Target Start/End: Original strand, 43415613 - 43415669
Alignment:
Q  374 taaatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatt 431  Q
    |||||||||||||||| ||||||||||||| ||||  |||  ||||||||||||||||    
T  43415613 taaatttatattatattgatatactttatcgattt-gaatagatgaatatcatttatt 43415669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 19646151 - 19646103
Alignment:
Q  179 gtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    |||||| ||||| ||||||| |||||||||||||  |||||||||||||    
T  19646151 gtcaatgtttgacccaaaatcacccctctaactcatttttctctttccc 19646103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 28618608 - 28618656
Alignment:
Q  179 gtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    |||||||||| | ||||||| |||||||||||||| |||||| ||||||    
T  28618608 gtcaatttttaacccaaaatcacccctctaactcgtttttctatttccc 28618656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 433
Target Start/End: Complemental strand, 39179555 - 39179500
Alignment:
Q  377 atttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||| |||| ||||||| ||||||||||||||  |||||||||||||| ||||||||    
T  39179555 atttgtattgtatcgatgtactttatcaattt-gaatgaatgaatatcgtttatttt 39179500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 173 - 224
Target Start/End: Original strand, 41358036 - 41358088
Alignment:
Q  173 tttagagtcaatttttgatccaaaatta-cccctctaactcgcttttctcttt 224  Q
    ||||| |||||||||||| ||||||| | ||||||||||||| ||||||||||    
T  41358036 tttagggtcaatttttgacccaaaatcaccccctctaactcgtttttctcttt 41358088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 374 - 433
Target Start/End: Complemental strand, 11281 - 11223
Alignment:
Q  374 taaatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||| |||| |||||||||||| ||||||||| |||||||| |||||||||||||||    
T  11281 taaatttttattgtatcgatatactctatcaattt-aaatgaattaatatcatttatttt 11223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000006; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 374 - 433
Target Start/End: Original strand, 17347983 - 17348041
Alignment:
Q  374 taaatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||||||||||||||||||| |||| ||||||||| |||||| |||||||| ||||||||    
T  17347983 taaatttatattatatcgatgtactctatcaattt-aaatgagtgaatatcgtttatttt 17348041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 374 - 433
Target Start/End: Original strand, 43504205 - 43504263
Alignment:
Q  374 taaatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||||||||||||||| |||||||| ||||||| | |||| |||||||||||||||||||    
T  43504205 taaatttatattatattgatatactctatcaatgt-aaataaatgaatatcatttatttt 43504263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 437
Target Start/End: Original strand, 23257484 - 23257537
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatca 437  Q
    ||||||||||| |||| |||||||||||| ||||| |||||||||||||||||||    
T  23257484 attatatcgatgtactctatcaatttaaa-tgaataaatatcatttattttatca 23257537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 44562865 - 44562811
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| |||||||||||| ||||||| |||||||||||||| |||||| ||||||    
T  44562865 tttagggtcaatttttgacccaaaatcacccctctaactcgtttttctatttccc 44562811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 383 - 447
Target Start/End: Complemental strand, 15276164 - 15276101
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaagaataaa 447  Q
    ||||||||||| |||| ||||||||| || |||||||||||| |||||||| |||||| ||||||    
T  15276164 attatatcgatgtactctatcaatttgaa-tgaatgaatatcttttattttgtcaaaaaaataaa 15276101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 451
Target Start/End: Original strand, 13999352 - 13999425
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaagaataaaaaat 451  Q
    ||||| |||| ||||||||||||||| |||||| |||| |||||||||| |||||||||| |||| || |||||||    
T  13999352 aatttgtattctatcgatatactttaccaattt-aaataaatgaatatc-tttattttataaaaaaaaaaaaaaat 13999425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 450
Target Start/End: Original strand, 51418394 - 51418468
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcattta-ttttatcaaaagaataaaaaa 450  Q
    ||||| |||||||||||| |||| ||||||||| ||||||||||||||| |||| |||| |||||| || ||||||    
T  51418394 aatttgtattatatcgatgtactctatcaattt-aaatgaatgaatatcgtttacttttgtcaaaaaaaaaaaaaa 51418468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 5832231 - 5832285
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| |||||||||||| || |||| |||||||||||||| |||||| ||||||    
T  5832231 tttagggtcaatttttgaccctaaatcacccctctaactcgtttttctatttccc 5832285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 376 - 438
Target Start/End: Complemental strand, 6212639 - 6212578
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaa 438  Q
    |||||| |||||||||||||||| |||||||||  ||||||| |||||| |||||||| ||||    
T  6212639 aatttacattatatcgatatactctatcaattt-gaatgaataaatatcttttattttgtcaa 6212578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 44562766 - 44562704
Alignment:
Q  254 ttgtgatttcgtcatcttaatgcgatgttggtttgttcatcgtattcgtgcggtattgtttgt 316  Q
    ||||||||||||||||||  ||||| |||||||||||| |||| || |||||  |||||||||    
T  44562766 ttgtgatttcgtcatcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacattgtttgt 44562704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 49652231 - 49652280
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||||| |||| ||||||||| || |||||||||||||||||||||    
T  49652231 attatatcgatgtactctatcaatttgaa-tgaatgaatatcatttatttt 49652280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 900440 - 900512
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaagaataaaaa 449  Q
    |||||| ||| ||||||| |||| ||||||||| || ||||||||||| |||||||||   |||||||||||||    
T  900440 aatttacattgtatcgatgtactctatcaatttgaa-tgaatgaatataatttatttttgtaaaagaataaaaa 900512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 8893300 - 8893345
Alignment:
Q  182 aatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||||||| ||||||| |||| ||||||||| |||||||||||||    
T  8893300 aatttttgacccaaaatcacccttctaactcgtttttctctttccc 8893345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 17579767 - 17579820
Alignment:
Q  174 ttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    |||| |||||||||||| ||||||| | |||||||||||  |||||||||||||    
T  17579767 ttagggtcaatttttgaaccaaaatcatccctctaactcatttttctctttccc 17579820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 433
Target Start/End: Original strand, 26771495 - 26771551
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||| |||| ||||||| |||| ||||||||| || |||||||||||||||||||||    
T  26771495 aatttgtattgtatcgatgtactctatcaatttgaa-tgaatgaatatcatttatttt 26771551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 440
Target Start/End: Complemental strand, 38644515 - 38644459
Alignment:
Q  383 attatatcgatatactttatcaatttaaaatgaatgaatatcatttattttatcaaaa 440  Q
    ||||||| ||| |||| |||||||||||| ||||||||||| ||||||||| ||||||    
T  38644515 attatattgatgtactctatcaatttaaa-tgaatgaatataatttattttgtcaaaa 38644459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 40992349 - 40992386
Alignment:
Q  190 atccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  40992349 atccaaaatcacccctctaactcgtttttctctttccc 40992386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 376 - 424
Target Start/End: Complemental strand, 424003 - 423956
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatc 424  Q
    ||||| |||||||||||||||||||||| ||||  ||||||||||||||    
T  424003 aatttgtattatatcgatatactttatcgattt-gaatgaatgaatatc 423956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 385 - 433
Target Start/End: Complemental strand, 12967449 - 12967402
Alignment:
Q  385 tatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||||||| |||| ||||||||| || |||||||||||||||||||||    
T  12967449 tatatcgatgtactctatcaatttgaa-tgaatgaatatcatttatttt 12967402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 13691874 - 13691826
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctc 221  Q
    ||||| |||||||||||| ||||||| |||||||||| ||| |||||||    
T  13691874 tttagggtcaatttttgacccaaaatcacccctctaaatcgtttttctc 13691826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 23320448 - 23320492
Alignment:
Q  183 atttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    |||||||| ||||||| |||||||||||||| |||||| ||||||    
T  23320448 atttttgacccaaaatcacccctctaactcgtttttctatttccc 23320492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 376 - 451
Target Start/End: Complemental strand, 25032814 - 25032739
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcattta-ttttatcaaaagaataaaaaat 451  Q
    ||||| |||| ||||||| |||| ||||||||| || |||||||||||| |||| |||||| |||| ||||||||||    
T  25032814 aatttgtattgtatcgatgtactctatcaatttgaa-tgaatgaatatcgtttatttttataaaaaaaataaaaaat 25032739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 52752036 - 52752080
Alignment:
Q  183 atttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    |||||||||||||||| ||| |||||||||| |||||| ||||||    
T  52752036 atttttgatccaaaatcacctctctaactcgtttttctttttccc 52752080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 1186 - 1107
Alignment:
Q  228 gattttcaaatctatttcactttttatt--gtgatttcgtcatcttaatgcgatgttggtttgttcatcgtattcgtgcg 305  Q
    |||||||| ||||||||   ||||||||  ||||||||||| ||||| ||||| |||||||||||| ||||||| |||||    
T  1186 gattttcacatctattttgttttttattttgtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtatttgtgcg 1107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 433
Target Start/End: Original strand, 3303 - 3361
Alignment:
Q  374 taaatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||||||||||| ||||||| |||| |||||||||  |||||||||||||| ||||||||    
T  3303 taaatttatattgtatcgatgtactctatcaattt-gaatgaatgaatatcgtttatttt 3361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 375 - 433
Target Start/End: Complemental strand, 5252 - 5195
Alignment:
Q  375 aaatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    |||||| |||||||||||| |||| ||| ||||| || |||||||||||||||||||||    
T  5252 aaatttgtattatatcgatgtactctataaatttgaa-tgaatgaatatcatttatttt 5195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 376 - 430
Target Start/End: Complemental strand, 6841 - 6787
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttat 430  Q
    ||||| |||| ||||||| |||| ||||||||| ||||||||||||||| |||||    
T  6841 aatttgtattgtatcgatgtactctatcaatttgaaatgaatgaatatcgtttat 6787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 9764 - 9710
Alignment:
Q  173 tttagagtcaatttttgatccaaaattacccctctaactcgcttttctctttccc 227  Q
    ||||| |||||||||||| ||||||| || ||||||||||| |||||| ||||||    
T  9764 tttagggtcaatttttgacccaaaatcactcctctaactcgtttttctatttccc 9710  T

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Target: scaffold0432 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 433
Target Start/End: Complemental strand, 2159 - 2103
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatcatttatttt 433  Q
    ||||| |||| ||||||| ||||||||||||||  |||||||||||||| ||||||||    
T  2159 aatttgtattgtatcgatgtactttatcaattt-gaatgaatgaatatcgtttatttt 2103  T

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Target: scaffold0312 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 376 - 424
Target Start/End: Original strand, 6546 - 6593
Alignment:
Q  376 aatttatattatatcgatatactttatcaatttaaaatgaatgaatatc 424  Q
    ||||| |||||||||||||||||||||| ||||  ||||||||||||||    
T  6546 aatttgtattatatcgatatactttatcgattt-gaatgaatgaatatc 6593  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 228 - 305
Target Start/End: Original strand, 36598 - 36677
Alignment:
Q  228 gattttcaaatctatttcactttttatt--gtgatttcgtcatcttaatgcgatgttggtttgttcatcgtattcgtgcg 305  Q
    |||||||| |||||||| | ||||||||  ||||||||||| ||||  ||||| |||||||||||| |||| || |||||    
T  36598 gattttcacatctattttattttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcg 36677  T

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