View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21545_high_20 (Length: 325)

Name: NF21545_high_20
Description: NF21545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21545_high_20
NF21545_high_20
[»] chr5 (16 HSPs)
chr5 (74-220)||(3020447-3020593)
chr5 (212-303)||(3020908-3020999)
chr5 (1-75)||(22721386-22721460)
chr5 (1-75)||(36789769-36789843)
chr5 (1-76)||(25336050-25336125)
chr5 (1-75)||(16475572-16475646)
chr5 (17-76)||(23107629-23107688)
chr5 (1-75)||(1212760-1212834)
chr5 (1-75)||(28969630-28969704)
chr5 (6-75)||(1598745-1598814)
chr5 (6-75)||(16478169-16478238)
chr5 (17-75)||(22387014-22387072)
chr5 (6-75)||(5812621-5812690)
chr5 (6-75)||(39565300-39565369)
chr5 (6-75)||(40830469-40830538)
chr5 (18-76)||(22497057-22497115)
[»] chr7 (12 HSPs)
chr7 (1-76)||(37316168-37316243)
chr7 (1-75)||(18784696-18784770)
chr7 (1-75)||(35113343-35113417)
chr7 (1-75)||(44045636-44045710)
chr7 (1-75)||(35504827-35504901)
chr7 (1-75)||(42046585-42046659)
chr7 (6-75)||(42049298-42049367)
chr7 (6-72)||(34643900-34643966)
chr7 (6-75)||(21954258-21954327)
chr7 (6-75)||(46804756-46804825)
chr7 (6-75)||(47400845-47400914)
chr7 (6-75)||(6612647-6612716)
[»] chr4 (11 HSPs)
chr4 (1-76)||(27071016-27071091)
chr4 (1-76)||(27151102-27151177)
chr4 (1-75)||(4943174-4943248)
chr4 (17-75)||(6243530-6243588)
chr4 (1-75)||(7509449-7509523)
chr4 (1-75)||(9768677-9768751)
chr4 (6-75)||(5943856-5943925)
chr4 (6-76)||(25887401-25887471)
chr4 (6-75)||(48425926-48425995)
chr4 (29-75)||(36353313-36353359)
chr4 (34-75)||(27024633-27024674)
[»] chr8 (14 HSPs)
chr8 (1-75)||(16428147-16428221)
chr8 (17-75)||(33441348-33441406)
chr8 (1-75)||(40557396-40557470)
chr8 (6-75)||(22513813-22513882)
chr8 (1-76)||(13279832-13279907)
chr8 (1-75)||(36896643-36896717)
chr8 (6-75)||(6416574-6416643)
chr8 (6-75)||(18385695-18385764)
chr8 (17-75)||(12501775-12501833)
chr8 (29-70)||(16888896-16888937)
chr8 (6-75)||(39622194-39622263)
chr8 (18-80)||(29089218-29089280)
chr8 (6-75)||(31726196-31726266)
chr8 (6-72)||(9220023-9220089)
[»] chr6 (7 HSPs)
chr6 (1-75)||(14175405-14175479)
chr6 (1-75)||(14179941-14180015)
chr6 (1-75)||(4271700-4271774)
chr6 (6-75)||(18903215-18903284)
chr6 (6-75)||(19420186-19420255)
chr6 (7-75)||(19420587-19420655)
chr6 (7-75)||(22510273-22510341)
[»] chr3 (18 HSPs)
chr3 (1-75)||(44516933-44517007)
chr3 (1-77)||(38190546-38190622)
chr3 (1-75)||(10122768-10122842)
chr3 (1-75)||(43844791-43844865)
chr3 (1-75)||(54610147-54610221)
chr3 (6-75)||(22397814-22397883)
chr3 (17-72)||(30106651-30106706)
chr3 (17-75)||(1003116-1003174)
chr3 (17-75)||(35350908-35350966)
chr3 (17-75)||(26706219-26706277)
chr3 (17-75)||(33957288-33957346)
chr3 (17-76)||(23302203-23302262)
chr3 (6-75)||(28418445-28418514)
chr3 (6-70)||(23302855-23302919)
chr3 (6-70)||(33955902-33955966)
chr3 (6-75)||(3345024-3345093)
chr3 (6-75)||(37964781-37964850)
chr3 (6-75)||(4066794-4066863)
[»] chr2 (8 HSPs)
chr2 (1-75)||(12256740-12256814)
chr2 (1-75)||(42843102-42843176)
chr2 (6-75)||(3555066-3555135)
chr2 (6-75)||(40263416-40263485)
chr2 (24-75)||(42224050-42224101)
chr2 (6-75)||(4651531-4651600)
chr2 (34-77)||(6904283-6904326)
chr2 (34-75)||(4720978-4721019)
[»] chr1 (17 HSPs)
chr1 (1-75)||(13496522-13496596)
chr1 (1-75)||(42435651-42435725)
chr1 (1-75)||(24455393-24455467)
chr1 (1-75)||(32049744-32049818)
chr1 (5-75)||(20274402-20274472)
chr1 (6-75)||(18410217-18410286)
chr1 (17-75)||(49004874-49004932)
chr1 (6-75)||(2023039-2023108)
chr1 (6-75)||(24775445-24775514)
chr1 (6-75)||(28645871-28645940)
chr1 (6-75)||(32524066-32524135)
chr1 (6-75)||(38984638-38984707)
chr1 (6-75)||(43643263-43643332)
chr1 (6-75)||(45536866-45536935)
chr1 (6-75)||(21332939-21333008)
chr1 (17-76)||(2840350-2840409)
chr1 (34-75)||(42829976-42830017)
[»] scaffold0088 (1 HSPs)
scaffold0088 (6-75)||(10643-10712)
[»] scaffold0009 (1 HSPs)
scaffold0009 (6-75)||(198991-199060)
[»] scaffold0368 (1 HSPs)
scaffold0368 (34-75)||(10032-10073)


Alignment Details
Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 74 - 220
Target Start/End: Original strand, 3020447 - 3020593
Alignment:
Q  74 atgcatcgctgtctcagaaaaaataacaattgtagtgcttgcttagcagtagtgaaagccgtggccgctgggcccacatttaagattatcttattgtccc 173  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3020447 atgcatcgctgtctcagaaaaaataacaactgtagtgcttgcttagcagtagtgaaagccgtggcccctgggcccacatttaagattatcttattgtccc 3020546  T
Q  174 cgtgttcgcgtggttctgttcctttgccatcccaccaataaactata 220  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  3020547 cgtgttcgcgtggttctgttcctttgccattccaccaataaactata 3020593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 212 - 303
Target Start/End: Original strand, 3020908 - 3020999
Alignment:
Q  212 taaactatataaactccacaccaacacattttcttcaataactattgatacgaaaaattcccaagctaataatattcaattcaatcacataa 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3020908 taaactatataaactccacaccaacacattttcttcaataactattgatacaaaaaattcccaagctaataatattcaattcaatcacataa 3020999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 22721386 - 22721460
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22721386 tgaggtggacatccttagaggaaaggaatttgaaataggctatttctaagaactctaaattgttagtataaagat 22721460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 36789769 - 36789843
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36789769 tgaggtggacatccttagaggaaaggaatttgaaataggctatttctaagaactctaaattgttagtataaagat 36789843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 25336125 - 25336050
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagatg 76  Q
    |||| |||||||| | |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  25336125 tgaggtggacatccttagaggaaaggaatttgaaatagactatttctaagaactctaaattgttagtataaagatg 25336050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 16475646 - 16475572
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  16475646 tgaggtggacatccttagaggaaaggaatttgaattaggctatttctaagaactctaaattgttagtataaagat 16475572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 23107629 - 23107688
Alignment:
Q  17 agaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagatg 76  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  23107629 agaggaaaggaatttgaactaggctatttctaagaactctaaattgttagtataaagatg 23107688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 1212760 - 1212834
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  1212760 tgaggtggacatccttagaggaaaggaatttgaattaggctatttctaagaactctagattgttagtataaagat 1212834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 28969630 - 28969704
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | |||| ||||||||||||| || ||||||||||| |||||||||||||||||||||||||    
T  28969630 tgaggtggacatctttagagaaaaggaatttgaattaggctatttctaaaaactctaaattgttagtataaagat 28969704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 1598745 - 1598814
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||||| |||||| |||| |||| |||| ||||||||||| |||||||||||||||||||||||||    
T  1598745 tggacatcattagaggagaggattttggaataggctatttctaaaaactctaaattgttagtataaagat 1598814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 16478238 - 16478169
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  16478238 tggacatctttagaggagaggattttgaaataggctatttctaaaaactctaaattgttagtataaagat 16478169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 22387014 - 22387072
Alignment:
Q  17 agaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||| |||| |||| |||||||||||||||| |||||||||||||||||||||||||    
T  22387014 agaggagaggattttggaataagctatttctaaaaactctaaattgttagtataaagat 22387072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 5812621 - 5812690
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| |||| |||| ||||||||||| |||||||||||||||||||||||||    
T  5812621 tggacatctttagaggagaggattttggaataggctatttctaaaaactctaaattgttagtataaagat 5812690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 39565300 - 39565369
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| |||| |||| ||||||||||| |||||||||||||||||||||||||    
T  39565300 tggacatctttagaggagaggattttggaataggctatttctaaaaactctaaattgttagtataaagat 39565369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 40830538 - 40830469
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| |||| |||| ||||||||||| |||||||||||||||||||||||||    
T  40830538 tggacatctttagaggagaggattttggaataggctatttctaaaaactctaaattgttagtataaagat 40830469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 22497057 - 22497115
Alignment:
Q  18 gaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagatg 76  Q
    ||||| |||| |||| |||| ||||||||||| ||||||||||||||||||||||||||    
T  22497057 gaggagaggattttggaataggctatttctaaaaactctaaattgttagtataaagatg 22497115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 37316168 - 37316243
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagatg 76  Q
    |||| |||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37316168 tgaggtggacatccttagaggaaaggaatttgaaataggctatttctaagaactctaaattgttagtataaagatg 37316243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18784696 - 18784770
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18784696 tgaggtggacatccttagaggaaaggaatttgaaataggctatttctaagaactctaaattgttagtataaagat 18784770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 35113417 - 35113343
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35113417 tgaggtggacatccttagaggaaaggaatttgaaataggctatttctaagaactctaaattgttagtataaagat 35113343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 44045636 - 44045710
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  44045636 tgaggtggacatccttagaggaaaggaatttgaaataggctatttctaagaactctaaattgttagtataaagat 44045710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 35504901 - 35504827
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  35504901 tgaggtggacatccttagaggaaaggaatttgaaataggctattgctaagaactctaaattgttagtataaagat 35504827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 42046659 - 42046585
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  42046659 tgaggtggacatccttagaggaaaggaatttgaattaggctatttctaagaactctaaattgttagtataaagat 42046585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 42049367 - 42049298
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  42049367 tggacatctttagaggagaggattttgaaataggctatttctaaaaactctaaattgttagtataaagat 42049298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 34643900 - 34643966
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaa 72  Q
    |||||||| | |||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||    
T  34643900 tggacatctttagaggagaggattttgaaataggctatttctaaaaactctaaattgttagtataaa 34643966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 21954258 - 21954327
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| |||| |||| ||||||||||| |||||||||||||||||||||||||    
T  21954258 tggacatctttagaggagaggattttggaataggctatttctaaaaactctaaattgttagtataaagat 21954327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 46804825 - 46804756
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| |||| |||| ||||||||||| |||||||||||||||||||||||||    
T  46804825 tggacatctttagaggagaggattttggaataggctatttctaaaaactctaaattgttagtataaagat 46804756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 47400845 - 47400914
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| |||| ||||| |||||||||| |||||||||||||||||||||||||    
T  47400845 tggacatctttagaggagaggattttggaataaactatttctaaaaactctaaattgttagtataaagat 47400914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 6612716 - 6612647
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| || | |||| |||| ||||||||||| ||||||||| ||||| |||||||||    
T  6612716 tggacatctttagaggagagaattttggaataggctatttctaaaaactctaaagtgttaatataaagat 6612647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 27071091 - 27071016
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagatg 76  Q
    |||| |||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27071091 tgaggtggacatccttagaggaaaggaatttgaaataggctatttctaagaactctaaattgttagtataaagatg 27071016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 27151177 - 27151102
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagatg 76  Q
    |||| |||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27151177 tgaggtggacatccttagaggaaaggaatttgaaataggctatttctaagaactctaaattgttagtataaagatg 27151102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 4943248 - 4943174
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  4943248 tgaggtggacatccttagaggaaaggaatttgaattaggctatttctaagaactctaaattgttagtataaagat 4943174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 6243530 - 6243588
Alignment:
Q  17 agaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6243530 agaggaaaggaatttgaaataggctatttctaagaactctaaattgttagtataaagat 6243588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7509523 - 7509449
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | | ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  7509523 tgaggtggacatccttaaaggaaaggaatttgaaataggttatttctaagaactctaaattgttagtataaagat 7509449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 9768677 - 9768751
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | |||||||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  9768677 tgaggtggacatccttagaggaaaggaatttgaaatagattatttctaagaactctaaattgttagtataaagat 9768751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 5943925 - 5943856
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  5943925 tggacatctttagaggagaggattttgaaataggctatttctaaaaactctaaattgttagtataaagat 5943856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 25887471 - 25887401
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagatg 76  Q
    |||||||| | |||||| |||| |||| ||||| |||||||||| ||||||||||||||||||||||||||    
T  25887471 tggacatctttagaggagaggattttggaataaactatttctaaaaactctaaattgttagtataaagatg 25887401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 48425995 - 48425926
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| || | ||||||||| ||||||||||| ||||||||||||||| |||||||||    
T  48425995 tggacatctttagaggagagaattttgaaataggctatttctaaaaactctaaattgttaatataaagat 48425926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 36353313 - 36353359
Alignment:
Q  29 tttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||||||    
T  36353313 tttgaaataggctatttttaaaaactctaaattgttagtataaagat 36353359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 27024633 - 27024674
Alignment:
Q  34 aataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| ||||||||||| ||||||||||||||||||| |||||    
T  27024633 aataggctatttctaaaaactctaaattgttagtatgaagat 27024674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 6e-25; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 16428221 - 16428147
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16428221 tgaggtggacatccttagaggaaaggaatttgaaataggctatttctaagaactctaaattgttagtataaagat 16428147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 33441406 - 33441348
Alignment:
Q  17 agaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33441406 agaggaaaggaatttgaaataagctatttctaaaaactctaaattgttagtataaagat 33441348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 40557470 - 40557396
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  40557470 tgaggtggacatccttagaggaaaggaatttgaattaggctatttctaagaactctaaattgttagtataaagat 40557396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 22513882 - 22513813
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  22513882 tggacatccttagaggaaaggaatttgaattaggctatttctaagaactctaaattgttagtataaagat 22513813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 13279832 - 13279907
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagatg 76  Q
    |||| |||||||| | |||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  13279832 tgaggtggacatccttagagcaaaggaatttgaaataggctatttctaaaaactctaaattgttagtataaagatg 13279907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 36896643 - 36896717
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | ||||||||||||||| |||||  |||||||||| |||||||||||||||||||||||||    
T  36896643 tgaggtggacatccttagaggaaaggaatttaaaatagactatttctaaaaactctaaattgttagtataaagat 36896717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 6416643 - 6416574
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  6416643 tggacatctttagaggagaggattttgaaataggctatttctaaaaactctaaattgttagtataaagat 6416574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 18385695 - 18385764
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  18385695 tggacatctttagaggagaggattttgaaataggctatttctaaaaactctaaattgttagtataaagat 18385764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 12501775 - 12501833
Alignment:
Q  17 agaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||| |||| ||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  12501775 agaggagaggattttgaaataggctatttctaaaaactctaaattgttagcataaagat 12501833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 16888896 - 16888937
Alignment:
Q  29 tttgaaataagctatttctaagaactctaaattgttagtata 70  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  16888896 tttgaaataagctatttctaaaaactctaaattgttagtata 16888937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 39622194 - 39622263
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||| | |||| |||| |||| ||||||||||| |||||||||||||||||||||||||    
T  39622194 tggacatctttagagaagaggattttggaataggctatttctaaaaactctaaattgttagtataaagat 39622263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 29089218 - 29089280
Alignment:
Q  18 gaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagatgcatc 80  Q
    ||||| |||| |||| |||||  ||||||||| ||||||||||||||||||||||||| ||||    
T  29089218 gaggagaggattttggaataaattatttctaaaaactctaaattgttagtataaagattcatc 29089280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 31726266 - 31726196
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaa-ctctaaattgttagtataaagat 75  Q
    |||||||| | ||| || |||| |||| |||||||||||||||| || |||||||||||||||||||||||    
T  31726266 tggacatctttagacgagaggattttggaataagctatttctaaaaaactctaaattgttagtataaagat 31726196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 9220089 - 9220023
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaa 72  Q
    |||||||| | |||||| || | |||| ||||  |||||||||| ||||||||||||||||||||||    
T  9220089 tggacatctttagaggagagaattttggaatagactatttctaaaaactctaaattgttagtataaa 9220023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 6e-25; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 14175479 - 14175405
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14175479 tgaggtggacatccttagaggaaaggaatttgaaataggctatttctaagaactctaaattgttagtataaagat 14175405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 14180015 - 14179941
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14180015 tgaggtggacatccttagaggaaaggaatttgaaataggctatttctaagaactctaaattgttagtataaagat 14179941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 4271700 - 4271774
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  4271700 tgaggtggacatccttagaggaaaggaatttgaattaggctatttctaagaactctaaattgttagtataaagat 4271774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 18903215 - 18903284
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  18903215 tggacatctttagaggagaggattttgaaataggctatttctaaaaactctaaattgttagtataaagat 18903284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 19420186 - 19420255
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| |||| |||||||||||||||| |||| ||||||||||||||||||||    
T  19420186 tggacatctttagaggagaggattttggaataagctatttctaaaaactttaaattgttagtataaagat 19420255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 19420655 - 19420587
Alignment:
Q  7 ggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    ||||||| | |||||| |||| |||| |||||||||||||||| ||||||||||| |||||||||||||    
T  19420655 ggacatctttagaggagaggattttggaataagctatttctaaaaactctaaattattagtataaagat 19420587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 22510341 - 22510273
Alignment:
Q  7 ggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    ||||||| | |||||| |||| |||| |||| ||||||||||| |||||||||||||||||||||||||    
T  22510341 ggacatctttagaggagaggattttggaataggctatttctaaaaactctaaattgttagtataaagat 22510273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 6e-25; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 44516933 - 44517007
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  44516933 tgaggtggacatccttagaggaaaggaatttgaaataggctatttctaagaactctaaattgttagtataaagat 44517007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 38190546 - 38190622
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagatgc 77  Q
    |||| |||||||| | ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  38190546 tgaggtggacatccttagaggaaaggaatttaaaataggctatttctaagaactctaaattgttagtataaagatgc 38190622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 10122768 - 10122842
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    ||||||||||||| | | ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  10122768 tgagatggacatctttaaaggaaaggaatttaaaataggctatttctaagaactctaaattgttagtataaagat 10122842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 43844865 - 43844791
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  43844865 tgaggtggacatccttagaggaaaggaatttgaaataggctatttgtaagaactctaaattgttagtataaagat 43844791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 54610221 - 54610147
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  54610221 tgaggtggacatccttagaggaaaggaatttgaaataggctatttttaagaactctaaattgttagtataaagat 54610147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 22397883 - 22397814
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  22397883 tggacatctttagaggaaaggattttgaaataagctatttctaaaaactctaaattgttagtataaagat 22397814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 30106706 - 30106651
Alignment:
Q  17 agaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaa 72  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30106706 agaggaaaggaatttgaaataggctatttctaagaactctaaattgttagtataaa 30106651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 1003116 - 1003174
Alignment:
Q  17 agaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1003116 agagaaaaggaatttgaaataggctatttctaagaactctaaattgttagtataaagat 1003174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 35350908 - 35350966
Alignment:
Q  17 agaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35350908 agagaaaaggaatttgaaataggctatttctaagaactctaaattgttagtataaagat 35350966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 26706219 - 26706277
Alignment:
Q  17 agaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    ||||||||| ||||| |||||  ||||||||||||||||||||||||||||||||||||    
T  26706219 agaggaaagaaatttaaaatagactatttctaagaactctaaattgttagtataaagat 26706277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 33957288 - 33957346
Alignment:
Q  17 agaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||| |||| ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  33957288 agaggagaggattttgaaataggctatttctaaaaactctaaattgttagtataaagat 33957346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 23302262 - 23302203
Alignment:
Q  17 agaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagatg 76  Q
    |||||| |||| |||| |||||||||||||||| |||| |||||||||||||||||||||    
T  23302262 agaggagaggattttggaataagctatttctaaaaactttaaattgttagtataaagatg 23302203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 28418445 - 28418514
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| || | |||| |||| ||||||||||| |||||||||||||||||||||||||    
T  28418445 tggacatctttagaggagagaattttggaatatgctatttctaaaaactctaaattgttagtataaagat 28418514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 23302919 - 23302855
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtata 70  Q
    |||||||| | |||||| |||| |||  |||||||||||||||| ||||||||||||||||||||    
T  23302919 tggacatctttagaggagaggattttagaataagctatttctaaaaactctaaattgttagtata 23302855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 33955902 - 33955966
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtata 70  Q
    |||||||| | |||||| |||| |||| |||| ||||||||||| ||||||||||||||||||||    
T  33955902 tggacatctttagaggagaggattttggaataggctatttctaaaaactctaaattgttagtata 33955966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 3345024 - 3345093
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||| | |||| |||| |||| ||||||||||| |||| ||||||||||||||||||||    
T  3345024 tggacatctttagagaagaggattttggaataggctatttctaaaaactttaaattgttagtataaagat 3345093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 37964850 - 37964781
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| || | |||| |||| ||||||||||| ||||||||||||||| |||||||||    
T  37964850 tggacatctttagaggagagaattttggaataggctatttctaaaaactctaaattgttaatataaagat 37964781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 4066794 - 4066863
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| || | |||| ||||  |||||||||| ||||||||||||||| |||||||||    
T  4066794 tggacatctttagaggagagaattttggaatagactatttctaaaaactctaaattgttaatataaagat 4066863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 6e-25; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 12256740 - 12256814
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12256740 tgaggtggacatccttagaggaaaggaatttgaaataggctatttctaagaactctaaattgttagtataaagat 12256814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 42843102 - 42843176
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  42843102 tgaggtggacatccttagaggaaaggaatttgaaataggctatttctaagaactctaaattgttagtataaagat 42843176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 3555066 - 3555135
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  3555066 tggacatctttagaggagaggattttgaaataagctatttctaaaaactctaaattgttagtataaagat 3555135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 40263485 - 40263416
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| ||||||||| ||||||||||| ||||||||||||||| |||||||||    
T  40263485 tggacatctttagaggagaggattttgaaataggctatttctaaaaactctaaattgttattataaagat 40263416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 42224101 - 42224050
Alignment:
Q  24 aggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||||||||||    
T  42224101 aggaatttggaataagctatttctaaaaactttaaattgttagtataaagat 42224050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 4651531 - 4651600
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| |||||||||  || ||||||| |||||||||||||||||||||||||    
T  4651531 tggacatctttagaggagaggattttgaaatagactgtttctaaaaactctaaattgttagtataaagat 4651600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 6904326 - 6904283
Alignment:
Q  34 aataagctatttctaagaactctaaattgttagtataaagatgc 77  Q
    |||| ||||||||||| |||||||||||||||||||||||||||    
T  6904326 aataggctatttctaaaaactctaaattgttagtataaagatgc 6904283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 4720978 - 4721019
Alignment:
Q  34 aataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||||||||||| ||||||||||| |||||||||||||    
T  4720978 aataagctatttctaaaaactctaaattcttagtataaagat 4721019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 13496596 - 13496522
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  13496596 tgaggtggacatccttagaggaaaggaatttgaaataggttatttctaagaactctaaattgttagtataaagat 13496522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 42435725 - 42435651
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  42435725 tgaggtggacatccttagaggaaaggaatttgaattaggctatttctaagaactctaaattgttagtataaagat 42435651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 24455393 - 24455467
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | |||||||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  24455393 tgaggtggacatccttagaggaaaggaatttgaaatagattatttctaagaactctaaattgttagtataaagat 24455467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 32049818 - 32049744
Alignment:
Q  1 tgagatggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| |||||||| | |||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  32049818 tgaggtggacatccttagaggaaatgaatttaaaataggctatttctaagaactctaaattgttagtataaagat 32049744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 20274472 - 20274402
Alignment:
Q  5 atggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    ||||||||| | |||| |||||| |||| |||||||||||||||| |||||||||||||||||||||||||    
T  20274472 atggacatctttagagtaaaggattttggaataagctatttctaaaaactctaaattgttagtataaagat 20274402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 18410286 - 18410217
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | ||||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  18410286 tggacatctttagaggaaaggattttgaaatagactatttctaaaaactctaaattgttagtataaagat 18410217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 49004932 - 49004874
Alignment:
Q  17 agaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    ||||||||||| |||| |||| ||||||||||| |||||||||||||||||||||||||    
T  49004932 agaggaaaggattttggaataggctatttctaaaaactctaaattgttagtataaagat 49004874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 2023108 - 2023039
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| |||| |||| ||||||||||| |||||||||||||||||||||||||    
T  2023108 tggacatctttagaggagaggattttggaataggctatttctaaaaactctaaattgttagtataaagat 2023039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 24775514 - 24775445
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| |||| |||| ||||||||||| |||||||||||||||||||||||||    
T  24775514 tggacatctttagaggagaggattttggaataggctatttctaaaaactctaaattgttagtataaagat 24775445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 28645871 - 28645940
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| |||| |||| ||||||||||| |||||||||||||||||||||||||    
T  28645871 tggacatctttagaggagaggattttggaataggctatttctaaaaactctaaattgttagtataaagat 28645940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 32524066 - 32524135
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| ||| ||||| ||||||||||| |||||||||||||||||||||||||    
T  32524066 tggacatctttagaggagaggattttaaaataggctatttctaaaaactctaaattgttagtataaagat 32524135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 38984638 - 38984707
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| ||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  38984638 tggacatctttagaggagaggattttgaaataggctgtttctaaaaactctaaattgttagtataaagat 38984707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 43643263 - 43643332
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| |||| |||| ||||||||||| |||||||||||||||||||||||||    
T  43643263 tggacatctttagaggagaggattttggaataggctatttctaaaaactctaaattgttagtataaagat 43643332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 45536935 - 45536866
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | ||||||||| | |||| |||| ||||||||||| |||||||||||||||||||||||||    
T  45536935 tggacatctttagaggaaagaattttggaataggctatttctaaaaactctaaattgttagtataaagat 45536866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 21332939 - 21333008
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| |||| |||  ||||||||||| |||||||||||||||||||||||||    
T  21332939 tggacatctttagaggagaggattttggaatgggctatttctaaaaactctaaattgttagtataaagat 21333008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 2840409 - 2840350
Alignment:
Q  17 agaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagatg 76  Q
    |||||| |||| |||| |||| ||| ||||||| ||||||||||||||||||||||||||    
T  2840409 agaggagaggattttggaataggctgtttctaaaaactctaaattgttagtataaagatg 2840350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 42829976 - 42830017
Alignment:
Q  34 aataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  42829976 aataggctatttctaaaaactctaaattgttagtataaagat 42830017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 10712 - 10643
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | | |||| |||| ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  10712 tggacatctttaaaggagaggattttgaaataggctatttctaaaaactctaaattgttagtataaagat 10643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 198991 - 199060
Alignment:
Q  6 tggacatcatcagaggaaaggaatttgaaataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||||||| | |||||| |||| ||| ||||| ||||||||||| |||||||||||||||||||||||||    
T  198991 tggacatctttagaggagaggatttttaaataggctatttctaaaaactctaaattgttagtataaagat 199060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 10032 - 10073
Alignment:
Q  34 aataagctatttctaagaactctaaattgttagtataaagat 75  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  10032 aataggctatttctaaaaactctaaattgttagtataaagat 10073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University