View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21546_low_1 (Length: 835)

Name: NF21546_low_1
Description: NF21546
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21546_low_1
NF21546_low_1
[»] chr5 (12 HSPs)
chr5 (546-835)||(10045679-10045968)
chr5 (6-244)||(40288920-40289158)
chr5 (334-451)||(10045462-10045579)
chr5 (642-835)||(10887972-10888165)
chr5 (642-835)||(39675782-39675975)
chr5 (651-835)||(10866218-10866402)
chr5 (651-835)||(10873903-10874087)
chr5 (651-835)||(10878974-10879158)
chr5 (651-835)||(10884045-10884229)
chr5 (141-241)||(7302366-7302466)
chr5 (141-241)||(16445715-16445815)
chr5 (288-344)||(10045382-10045438)
[»] chr8 (2 HSPs)
chr8 (8-244)||(25997992-25998228)
chr8 (660-730)||(30710110-30710180)
[»] chr3 (1 HSPs)
chr3 (8-278)||(6300862-6301132)
[»] chr6 (3 HSPs)
chr6 (6-244)||(24740360-24740598)
chr6 (100-241)||(4201179-4201319)
chr6 (31-77)||(4201324-4201369)
[»] chr7 (1 HSPs)
chr7 (100-242)||(10371112-10371253)
[»] chr4 (1 HSPs)
chr4 (141-241)||(6122544-6122644)


Alignment Details
Target: chr5 (Bit Score: 278; Significance: 1e-155; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 546 - 835
Target Start/End: Original strand, 10045679 - 10045968
Alignment:
Q  546 cggagagaaatggacgttcaccggagaacagtcaacgccgtcgtctccgaaaaatattcaaaaacaaagaaccaaaagcttgattcacagtcacaatctt 645  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10045679 cggagagaaatggacgttcaccggagaacagtcaacgccgtcgtctccgaaaaatattcaaaaacaaagaaccaaaagcttgattcacagtcacaatctt 10045778  T
Q  646 cactctacttaacaaacgcagttttcttcggtcttttcttctctgtcgcgtattttcttcttcaccggtggcgtgagaagatccgaacctccacacctct 745  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10045779 cactctacttaacaaacgcaattttcttcggtcttttcttctccgtcgcgtattttcttcttcacaggtggcgtgagaagatccgaacctccacacctct 10045878  T
Q  746 tcatgttctcacaatctctgagattgccggtgttgtttccctcatagcttcctttatttaccttatggctttcttcggcattggcttcat 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10045879 tcatgttctcacaatctctgagattgccggtgttgtttccctcatagcttcctttatttaccttatggctttcttcggcattggcttcat 10045968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 40288920 - 40289158
Alignment:
Q  6 gccttgcatataattgaattgatgtttccaatgccttgcatattttcaacgtgaggtgggaaaccagaaggtatttcaacgtgaggtacagtattaaatt 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40288920 gccttgcatataattgaattgatgtttccaatgccttgcatattttcaacgtgaggtgggaaaccagaaggtatttcaacgtgaggtacaatattaaatt 40289019  T
Q  106 tctctaatgcagttgtacaatcatgttggtgtacattaattttaagaaaagggcaatatagtcaatttaacttatgttttatacaaaatttagaaaatca 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40289020 tctctaatgcagttgtacaatcatgttggtgtacattaattttaagaaaatggcaatatagtcaatttaacttatgttttatacaaaatttagaaaatca 40289119  T
Q  206 actatacttaactgcatttcttaatcaccgtgaaagctg 244  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  40289120 actacacttaactgcatttcttaatcaccgtgaaagctg 40289158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 334 - 451
Target Start/End: Original strand, 10045462 - 10045579
Alignment:
Q  334 aatttgtcaaaataaaattgtctaaccaataaagtgaagtattaaaacgacacgctgtactcgtgtacaacatggtctttcccatttccctccttcactc 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10045462 aatttgtcaaaataaaattgtctaaccaataaagtgaagtattaaaacgacacgctgtactcgtgtacaacatggtctttcccatttccctccctcactc 10045561  T
Q  434 gctataaataacttctaa 451  Q
    ||||||||||||||||||    
T  10045562 gctataaataacttctaa 10045579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 642 - 835
Target Start/End: Complemental strand, 10888165 - 10887972
Alignment:
Q  642 tcttcactctacttaacaaacgcagttttcttcggtcttttcttctctgtcgcgtattttcttcttcaccggtggcgtgagaagatccgaacctccacac 741  Q
    |||||||| || ||||||||||| |||||||| ||||| |||||||| | |||||| ||||||||| || |||||||||| |||||||||||||| ||||    
T  10888165 tcttcactgtatttaacaaacgctgttttctttggtctcttcttctccgccgcgtactttcttcttaacaggtggcgtgaaaagatccgaacctctacac 10888066  T
Q  742 ctcttcatgttctcacaatctctgagattgccggtgttgtttccctcatagcttcctttatttaccttatggctttcttcggcattggcttcat 835  Q
    |||| ||  | |||||| ||||||||||||  | ||| ||||||||||| ||||||||  | |||||||| ||||||||||||| || ||||||    
T  10888065 ctctccacatcctcacagtctctgagattgttgctgtagtttccctcatcgcttccttcgtctaccttattgctttcttcggcactgccttcat 10887972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 642 - 835
Target Start/End: Original strand, 39675782 - 39675975
Alignment:
Q  642 tcttcactctacttaacaaacgcagttttcttcggtcttttcttctctgtcgcgtattttcttcttcaccggtggcgtgagaagatccgaacctccacac 741  Q
    |||||||| |||||||||||| |  ||||||||||||| |||||||| ||||| || ||||||||| ||||||||||||| |||||||||||||| ||||    
T  39675782 tcttcactttacttaacaaacacttttttcttcggtctcttcttctccgtcgcatactttcttcttaaccggtggcgtgaaaagatccgaacctctacac 39675881  T
Q  742 ctcttcatgttctcacaatctctgagattgccggtgttgtttccctcatagcttcctttatttaccttatggctttcttcggcattggcttcat 835  Q
    |||| ||||| ||||||||||| ||||||   | | | ||||||||||| |||| | |||| ||||||| ||||||||| ||| ||| ||||||    
T  39675882 ctctccatgtcctcacaatctccgagattcttgctctagtttccctcattgcttgccttatctaccttacggctttctttggcgttgccttcat 39675975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 651 - 835
Target Start/End: Original strand, 10866218 - 10866402
Alignment:
Q  651 tacttaacaaacgcagttttcttcggtcttttcttctctgtcgcgtattttcttcttcaccggtggcgtgagaagatccgaacctccacacctcttcatg 750  Q
    ||||||||||| |  |||||||| ||||| |||||||| ||||| || ||||||||  || |||||||||| |||||||||||||| |||||||| || |    
T  10866218 tacttaacaaatgttgttttctttggtctcttcttctccgtcgcctactttcttctcaacaggtggcgtgaaaagatccgaacctctacacctctccacg 10866317  T
Q  751 ttctcacaatctctgagattgccggtgttgtttccctcatagcttcctttatttaccttatggctttcttcggcattggcttcat 835  Q
    | ||||||||||||||||||  || | ||||||||||||| ||||||||| | ||||||||  ||||||||||||||| ||||||    
T  10866318 tcctcacaatctctgagattctcgctcttgtttccctcatcgcttcctttgtctaccttatcactttcttcggcattgccttcat 10866402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 651 - 835
Target Start/End: Complemental strand, 10874087 - 10873903
Alignment:
Q  651 tacttaacaaacgcagttttcttcggtcttttcttctctgtcgcgtattttcttcttcaccggtggcgtgagaagatccgaacctccacacctcttcatg 750  Q
    ||||||||||| |  |||||||| ||||| |||||||| ||||| || ||||||||  || |||||||||| |||||||||||||| |||||||| || |    
T  10874087 tacttaacaaatgttgttttctttggtctcttcttctccgtcgcctactttcttctcaacaggtggcgtgaaaagatccgaacctctacacctctccacg 10873988  T
Q  751 ttctcacaatctctgagattgccggtgttgtttccctcatagcttcctttatttaccttatggctttcttcggcattggcttcat 835  Q
    | ||||||||||||||||||  || | ||||||||||||| ||||||||| | ||||||||  ||||||||||||||| ||||||    
T  10873987 tcctcacaatctctgagattctcgctcttgtttccctcatcgcttcctttgtctaccttatcactttcttcggcattgccttcat 10873903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 651 - 835
Target Start/End: Complemental strand, 10879158 - 10878974
Alignment:
Q  651 tacttaacaaacgcagttttcttcggtcttttcttctctgtcgcgtattttcttcttcaccggtggcgtgagaagatccgaacctccacacctcttcatg 750  Q
    ||||||||||| |  |||||||| ||||| |||||||| ||||| || ||||||||  || |||||||||| |||||||||||||| |||||||| || |    
T  10879158 tacttaacaaatgttgttttctttggtctcttcttctccgtcgcctactttcttctcaacaggtggcgtgaaaagatccgaacctctacacctctccacg 10879059  T
Q  751 ttctcacaatctctgagattgccggtgttgtttccctcatagcttcctttatttaccttatggctttcttcggcattggcttcat 835  Q
    | ||||||||||||||||||  || | ||||||||||||| ||||||||| | ||||||||  ||||||||||||||| ||||||    
T  10879058 tcctcacaatctctgagattctcgctcttgtttccctcatcgcttcctttgtctaccttatcactttcttcggcattgccttcat 10878974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 651 - 835
Target Start/End: Complemental strand, 10884229 - 10884045
Alignment:
Q  651 tacttaacaaacgcagttttcttcggtcttttcttctctgtcgcgtattttcttcttcaccggtggcgtgagaagatccgaacctccacacctcttcatg 750  Q
    ||||||||||| |  |||||||| ||||| |||||||| ||||| || ||||||||  || |||||||||| |||||||||||||| |||||||| || |    
T  10884229 tacttaacaaatgttgttttctttggtctcttcttctccgtcgcctactttcttctcaacaggtggcgtgaaaagatccgaacctctacacctctccacg 10884130  T
Q  751 ttctcacaatctctgagattgccggtgttgtttccctcatagcttcctttatttaccttatggctttcttcggcattggcttcat 835  Q
    | ||||||||||||||||||  || | ||||||||||||| ||||||||| | ||||||||  ||||||||||||||| ||||||    
T  10884129 tcctcacaatctctgagattctcgctcttgtttccctcatcgcttcctttgtctaccttatcactttcttcggcattgccttcat 10884045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 7302466 - 7302366
Alignment:
Q  141 ttaattttaagaaaagggcaatatagtcaatttaacttatgttttatacaaaatttagaaaatcaactatacttaactgcatttcttaatcaccgtgaaa 240  Q
    |||||||||||||||||||||||||||| |||| |||||||||||| ||||| | |||||||| || || ||||||| | ||||||||||||||||||||    
T  7302466 ttaattttaagaaaagggcaatatagtccatttgacttatgttttacacaaattctagaaaattaattacacttaacagtatttcttaatcaccgtgaaa 7302367  T
Q  241 g 241  Q
    |    
T  7302366 g 7302366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 16445715 - 16445815
Alignment:
Q  141 ttaattttaagaaaagggcaatatagtcaatttaacttatgttttatacaaaatttagaaaatcaactatacttaactgcatttcttaatcaccgtgaaa 240  Q
    |||||||||||||||||||||||||||| |||| |||||||||||| ||||| | |||||||| || || ||||||| | ||||||||||||||||||||    
T  16445715 ttaattttaagaaaagggcaatatagtccatttgacttatgttttacacaaattctagaaaattaattacacttaacagtatttcttaatcaccgtgaaa 16445814  T
Q  241 g 241  Q
    |    
T  16445815 g 16445815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 10045382 - 10045438
Alignment:
Q  288 ggtttgaatccctaccaccacagaaaaagtttgtctaagtaaaaataatttgtcaaa 344  Q
    |||||||||||| ||||  | | ||||||||||||||||||||||||||||||||||    
T  10045382 ggtttgaatcccgaccataaaaaaaaaagtttgtctaagtaaaaataatttgtcaaa 10045438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 233; Significance: 1e-128; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 8 - 244
Target Start/End: Original strand, 25997992 - 25998228
Alignment:
Q  8 cttgcatataattgaattgatgtttccaatgccttgcatattttcaacgtgaggtgggaaaccagaaggtatttcaacgtgaggtacagtattaaatttc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25997992 cttgcatataattgaattgatgtttccaatgccttgcatattttcaacgtgaggtgggaaaccagaaggtatttcaacgtgaggtacagtattaaatttc 25998091  T
Q  108 tctaatgcagttgtacaatcatgttggtgtacattaattttaagaaaagggcaatatagtcaatttaacttatgttttatacaaaatttagaaaatcaac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25998092 tctaatgcagttgtacaatcatgttggtgtacattaattttaagaaaagggcaatatagtcaatttaacttatgttttatacaaaatttagaaaatcaac 25998191  T
Q  208 tatacttaactgcatttcttaatcaccgtgaaagctg 244  Q
    || ||||||||||||||||||||||||||||||||||    
T  25998192 tacacttaactgcatttcttaatcaccgtgaaagctg 25998228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 660 - 730
Target Start/End: Complemental strand, 30710180 - 30710110
Alignment:
Q  660 aacgcagttttcttcggtcttttcttctctgtcgcgtattttcttcttcaccggtggcgtgagaagatccg 730  Q
    ||||| |||||||||||| |||||||||| ||||||||||| || || ||||| |||||||||||||||||    
T  30710180 aacgctgttttcttcggtgttttcttctccgtcgcgtatttcctcctccaccgttggcgtgagaagatccg 30710110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 8 - 278
Target Start/End: Original strand, 6300862 - 6301132
Alignment:
Q  8 cttgcatataattgaattgatgtttccaatgccttgcatattttcaacgtgaggtgggaaaccagaaggtatttcaacgtgaggtacagtattaaatttc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6300862 cttgcatataattgaattgatgtttccaatgccttgcatattttcaacgtgaggtgggaaaccagaaggtatttcaacgtgaggtacaatattaaatttc 6300961  T
Q  108 tctaatgcagttgtacaatcatgttggtgtacattaattttaagaaaagggcaatatagtcaatttaacttatgttttatacaaaatttagaaaatcaac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6300962 tctaatgcagttgtacaatcatgttggtgtacattaattttaagagaagggcaatatagtcaatttaacttatgttttatacaaaatttagaaaatcaac 6301061  T
Q  208 tatacttaactgcatttcttaatcaccgtgaaagctgnnnnnnnngcttatatatgtgaccgaaggatgta 278  Q
    |||||||||||||||||||||||||||||||||||||        ||||||||||||||||| ||| ||||    
T  6301062 tatacttaactgcatttcttaatcaccgtgaaagctgttttttttgcttatatatgtgaccggagggtgta 6301132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 227; Significance: 1e-125; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 24740598 - 24740360
Alignment:
Q  6 gccttgcatataattgaattgatgtttccaatgccttgcatattttcaacgtgaggtgggaaaccagaaggtatttcaacgtgaggtacagtattaaatt 105  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24740598 gccttgcatataattgaattgatgtttccaatgtcttgcatattttcaacgtgaggtgggaaaccagaaggtatttcaacgtgaggtacagtattaaatt 24740499  T
Q  106 tctctaatgcagttgtacaatcatgttggtgtacattaattttaagaaaagggcaatatagtcaatttaacttatgttttatacaaaatttagaaaatca 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24740498 tctctaatgcagttgtacaatcatgttggtgtacattaattttaagaaaagggcaatatagtcaatttaacttatgttttatacaaaatttagaaaatca 24740399  T
Q  206 actatacttaactgcatttcttaatcaccgtgaaagctg 244  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  24740398 actacacttaactgcatttcttaatcaccgtaaaagctg 24740360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 100 - 241
Target Start/End: Complemental strand, 4201319 - 4201179
Alignment:
Q  100 taaatttctct-aatgcagttgtacaatcatgttggtgtacattaattttaagaaaagggcaatatagtcaatttaacttatgttttatacaaaatttag 198  Q
    ||||||||||| ||||||  |||||||| |||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  4201319 taaatttctctgaatgcatatgtacaatgatgttggtgta--ttaattttaagaaaagggcaatatagtcaatttaatttatgttttacacaaaatttag 4201222  T
Q  199 aaaatcaactatacttaactgcatttcttaatcaccgtgaaag 241  Q
     |||||||||| |||||||||||||||||||||||||||||||    
T  4201221 gaaatcaactacacttaactgcatttcttaatcaccgtgaaag 4201179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 4201369 - 4201324
Alignment:
Q  31 ttccaatgccttgcatattttcaacgtgaggtgggaaaccagaaggt 77  Q
    ||||| ||||||||||||||||| ||||||||||||||||| |||||    
T  4201369 ttccactgccttgcatattttca-cgtgaggtgggaaaccaaaaggt 4201324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 7e-33; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 100 - 242
Target Start/End: Original strand, 10371112 - 10371253
Alignment:
Q  100 taaatttctct-aatgcagttgtacaatcatgttggtgtacattaattttaagaaaagggcaatatagtcaatttaacttatgttttatacaaaatttag 198  Q
    ||||||||||| ||||| |||||||||| ||||||||||    ||||||||||||||||||||||||||||||| |||| |||||||| ||||  ||||     
T  10371112 taaatttctctgaatgcggttgtacaataatgttggtgttg--taattttaagaaaagggcaatatagtcaattcaactaatgttttacacaagttttaa 10371209  T
Q  199 aaaatcaactatacttaactgcatttcttaatcaccgtgaaagc 242  Q
    ||||| ||||| |||||||| |||||||||||||||||||||||    
T  10371210 aaaattaactacacttaactacatttcttaatcaccgtgaaagc 10371253  T

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Target: chr4 (Bit Score: 61; Significance: 9e-26; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 6122644 - 6122544
Alignment:
Q  141 ttaattttaagaaaagggcaatatagtcaatttaacttatgttttatacaaaatttagaaaatcaactatacttaactgcatttcttaatcaccgtgaaa 240  Q
    |||||||||||||||||||||||||||| |||| |||||||||||| ||||| | |||||||| || || ||||||| | ||||||||||||||||||||    
T  6122644 ttaattttaagaaaagggcaatatagtccatttgacttatgttttacacaaattctagaaaattaattacacttaacagtatttcttaatcaccgtgaaa 6122545  T
Q  241 g 241  Q
    |    
T  6122544 g 6122544  T

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