View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21547_high_9 (Length: 228)
Name: NF21547_high_9
Description: NF21547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21547_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 104 - 213
Target Start/End: Original strand, 17777516 - 17777627
Alignment:
| Q |
104 |
ataatactcaatatgtttgtcttactata--aggattttaccaatattccannnnnnnnnnataacaaagagtattctattttggttttgaaaccttcca |
201 |
Q |
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| T |
17777516 |
ataatactcaatatgtttgtcttactatataaggattttaccaatattccattttttttatataacaaagagtactctattttggttttgaaaccttcca |
17777615 |
T |
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| Q |
202 |
aaaatggtaact |
213 |
Q |
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|||||||||||| |
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| T |
17777616 |
aaaatggtaact |
17777627 |
T |
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