View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21547_low_11 (Length: 220)

Name: NF21547_low_11
Description: NF21547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21547_low_11
NF21547_low_11
[»] chr2 (65 HSPs)
chr2 (1-140)||(17777319-17777463)
chr2 (139-198)||(30190921-30190980)
chr2 (140-198)||(20347461-20347519)
chr2 (140-198)||(11883622-11883680)
chr2 (137-195)||(26841583-26841641)
chr2 (141-198)||(11883923-11883980)
chr2 (134-195)||(41790912-41790973)
chr2 (139-195)||(2639482-2639538)
chr2 (136-195)||(5378656-5378715)
chr2 (140-195)||(6171456-6171511)
chr2 (140-195)||(18296693-18296748)
chr2 (140-195)||(24832330-24832385)
chr2 (140-195)||(2638819-2638874)
chr2 (136-195)||(17850973-17851032)
chr2 (140-195)||(37720203-37720258)
chr2 (141-195)||(26842238-26842292)
chr2 (136-198)||(30191222-30191284)
chr2 (144-198)||(40469726-40469780)
chr2 (142-195)||(18296077-18296130)
chr2 (139-195)||(5379959-5380015)
chr2 (144-195)||(7591204-7591255)
chr2 (144-195)||(8851151-8851202)
chr2 (140-195)||(8851582-8851637)
chr2 (136-195)||(26737781-26737840)
chr2 (136-198)||(40469422-40469484)
chr2 (140-193)||(6495723-6495776)
chr2 (136-193)||(29230277-29230334)
chr2 (144-197)||(32673141-32673193)
chr2 (139-195)||(7664246-7664302)
chr2 (139-195)||(20347161-20347217)
chr2 (136-195)||(7664673-7664732)
chr2 (144-195)||(26692820-26692871)
chr2 (140-198)||(26737481-26737537)
chr2 (143-193)||(6325349-6325399)
chr2 (144-198)||(15920781-15920835)
chr2 (141-195)||(16910827-16910881)
chr2 (140-198)||(43495308-43495366)
chr2 (141-193)||(6171156-6171207)
chr2 (135-195)||(18055316-18055376)
chr2 (148-191)||(6324924-6324967)
chr2 (136-195)||(7591850-7591909)
chr2 (143-198)||(18055050-18055103)
chr2 (144-198)||(18055169-18055224)
chr2 (144-198)||(43495481-43495535)
chr2 (144-194)||(15321515-15321565)
chr2 (137-195)||(16911269-16911326)
chr2 (136-193)||(29343575-29343633)
chr2 (146-194)||(26737657-26737706)
chr2 (141-198)||(43495602-43495658)
chr2 (142-194)||(6495468-6495519)
chr2 (138-198)||(17346032-17346091)
chr2 (143-195)||(19141446-19141497)
chr2 (141-193)||(40221313-40221364)
chr2 (146-193)||(40469607-40469655)
chr2 (144-191)||(5793450-5793497)
chr2 (144-198)||(17345736-17345788)
chr2 (144-195)||(26692399-26692450)
chr2 (135-194)||(32672836-32672895)
chr2 (134-195)||(7979560-7979619)
chr2 (136-197)||(15321387-15321446)
chr2 (137-195)||(18750126-18750183)
chr2 (146-195)||(40221488-40221538)
chr2 (146-194)||(32673020-32673069)
chr2 (146-193)||(11883751-11883799)
chr2 (144-191)||(19141853-19141898)
[»] chr7 (67 HSPs)
chr7 (137-198)||(9412322-9412383)
chr7 (141-198)||(3687653-3687710)
chr7 (135-195)||(44599483-44599543)
chr7 (135-198)||(13772898-13772961)
chr7 (136-195)||(13863308-13863367)
chr7 (140-195)||(44600135-44600190)
chr7 (135-196)||(9034861-9034922)
chr7 (139-195)||(10533032-10533088)
chr7 (135-195)||(37888827-37888887)
chr7 (139-195)||(37889259-37889315)
chr7 (136-195)||(20418883-20418942)
chr7 (140-195)||(37972396-37972451)
chr7 (137-195)||(8643766-8643824)
chr7 (141-195)||(9035293-9035347)
chr7 (140-198)||(9412022-9412080)
chr7 (138-195)||(13772638-13772695)
chr7 (136-189)||(23686723-23686776)
chr7 (135-198)||(3687347-3687411)
chr7 (140-195)||(3205093-3205148)
chr7 (140-187)||(13863964-13864011)
chr7 (140-195)||(17156966-17157021)
chr7 (140-195)||(20419324-20419379)
chr7 (140-195)||(22740155-22740210)
chr7 (140-191)||(29292921-29292972)
chr7 (137-195)||(46816311-46816369)
chr7 (138-195)||(37971957-37972014)
chr7 (144-195)||(18863970-18864021)
chr7 (141-192)||(29293349-29293400)
chr7 (142-192)||(5735253-5735303)
chr7 (136-194)||(6908208-6908265)
chr7 (141-195)||(13741557-13741611)
chr7 (136-193)||(18925057-18925114)
chr7 (140-193)||(38826915-38826968)
chr7 (142-198)||(8953886-8953941)
chr7 (139-195)||(33628660-33628716)
chr7 (141-195)||(3204669-3204721)
chr7 (140-195)||(13744233-13744287)
chr7 (140-195)||(16198977-16199032)
chr7 (145-195)||(18925229-18925280)
chr7 (144-198)||(27096168-27096223)
chr7 (144-198)||(27182080-27182135)
chr7 (143-198)||(29291808-29291863)
chr7 (144-194)||(6908485-6908534)
chr7 (139-193)||(18864404-18864457)
chr7 (136-194)||(23686416-23686473)
chr7 (144-198)||(27096339-27096392)
chr7 (144-198)||(27181911-27181964)
chr7 (141-195)||(48359320-48359373)
chr7 (136-189)||(27096042-27096094)
chr7 (136-189)||(27182209-27182261)
chr7 (141-198)||(29292038-29292095)
chr7 (140-181)||(34235737-34235778)
chr7 (143-196)||(34235977-34236030)
chr7 (141-194)||(35079960-35080012)
chr7 (140-189)||(42418590-42418639)
chr7 (139-196)||(42419028-42419084)
chr7 (141-195)||(5349733-5349784)
chr7 (139-193)||(15567276-15567327)
chr7 (148-194)||(5735382-5735429)
chr7 (144-195)||(22740591-22740641)
chr7 (140-195)||(30857904-30857959)
chr7 (142-195)||(18925322-18925373)
chr7 (145-198)||(38191387-38191440)
chr7 (142-196)||(39983700-39983754)
chr7 (144-189)||(5735553-5735598)
chr7 (146-194)||(6908391-6908440)
chr7 (141-194)||(38191566-38191619)
[»] chr1 (75 HSPs)
chr1 (140-198)||(47955305-47955363)
chr1 (140-195)||(8108993-8109048)
chr1 (136-195)||(48190766-48190825)
chr1 (140-195)||(49284408-49284463)
chr1 (137-195)||(44911021-44911079)
chr1 (135-195)||(9347120-9347180)
chr1 (139-195)||(32163043-32163099)
chr1 (139-195)||(48191355-48191411)
chr1 (143-198)||(17518599-17518653)
chr1 (140-195)||(39692000-39692055)
chr1 (139-198)||(47955605-47955664)
chr1 (140-198)||(13589656-13589713)
chr1 (144-193)||(22149701-22149750)
chr1 (141-198)||(41082909-41082966)
chr1 (136-195)||(6002232-6002291)
chr1 (136-195)||(19008750-19008809)
chr1 (139-198)||(31848189-31848248)
chr1 (144-195)||(50430081-50430132)
chr1 (144-198)||(1176839-1176893)
chr1 (139-197)||(8108719-8108777)
chr1 (141-195)||(48105116-48105170)
chr1 (135-195)||(26814688-26814748)
chr1 (139-195)||(26815119-26815175)
chr1 (139-195)||(28633718-28633774)
chr1 (139-195)||(28634157-28634213)
chr1 (138-194)||(39690791-39690847)
chr1 (144-192)||(46823846-46823894)
chr1 (143-195)||(50526472-50526524)
chr1 (140-195)||(4692433-4692488)
chr1 (136-195)||(13918441-13918500)
chr1 (142-193)||(13918869-13918920)
chr1 (141-196)||(20371352-20371406)
chr1 (136-195)||(27172111-27172169)
chr1 (140-191)||(27172545-27172596)
chr1 (139-198)||(41083208-41083266)
chr1 (144-195)||(48104681-48104732)
chr1 (139-197)||(1177016-1177074)
chr1 (135-193)||(6703454-6703512)
chr1 (141-195)||(6703894-6703948)
chr1 (136-198)||(17518298-17518359)
chr1 (140-190)||(50615239-50615289)
chr1 (140-190)||(50623067-50623117)
chr1 (141-194)||(20480613-20480665)
chr1 (144-193)||(42611188-42611237)
chr1 (143-195)||(6002894-6002946)
chr1 (139-195)||(9347551-9347606)
chr1 (140-195)||(20480167-20480221)
chr1 (139-194)||(44911438-44911493)
chr1 (140-195)||(46824278-46824333)
chr1 (141-191)||(1176717-1176766)
chr1 (140-190)||(19007734-19007783)
chr1 (141-195)||(21687025-21687079)
chr1 (140-198)||(22149402-22149458)
chr1 (141-191)||(49318170-49318219)
chr1 (141-195)||(50615621-50615674)
chr1 (141-195)||(50623449-50623502)
chr1 (144-193)||(42611616-42611665)
chr1 (139-191)||(999529-999580)
chr1 (144-191)||(31848019-31848067)
chr1 (142-193)||(46056904-46056953)
chr1 (139-191)||(50949569-50949621)
chr1 (144-191)||(31847898-31847945)
chr1 (140-195)||(33085670-33085725)
chr1 (140-195)||(48313792-48313847)
chr1 (164-195)||(49285055-49285086)
chr1 (144-193)||(22149580-22149630)
chr1 (141-191)||(49317752-49317801)
chr1 (146-194)||(17518481-17518530)
chr1 (144-192)||(46057019-46057068)
chr1 (142-195)||(47498495-47498547)
chr1 (140-193)||(50429655-50429708)
chr1 (144-193)||(50949164-50949213)
chr1 (140-195)||(20371039-20371092)
chr1 (141-189)||(21687473-21687520)
chr1 (136-191)||(47498296-47498349)
[»] chr8 (64 HSPs)
chr8 (141-198)||(41662400-41662457)
chr8 (143-198)||(765736-765791)
chr8 (140-198)||(12281123-12281181)
chr8 (141-198)||(15156182-15156239)
chr8 (137-198)||(16928938-16928999)
chr8 (137-193)||(13026631-13026687)
chr8 (138-198)||(15155880-15155940)
chr8 (140-195)||(9823361-9823416)
chr8 (136-195)||(39724048-39724107)
chr8 (140-198)||(43246173-43246231)
chr8 (141-198)||(16929239-16929296)
chr8 (141-198)||(37752413-37752470)
chr8 (135-195)||(13027281-13027341)
chr8 (136-195)||(22851385-22851444)
chr8 (136-198)||(12281423-12281485)
chr8 (137-195)||(34498555-34498613)
chr8 (141-195)||(37752084-37752138)
chr8 (138-195)||(37396705-37396762)
chr8 (141-198)||(43245871-43245928)
chr8 (139-195)||(13937389-13937445)
chr8 (143-195)||(25438794-25438846)
chr8 (136-195)||(9822743-9822802)
chr8 (140-195)||(13936722-13936776)
chr8 (136-195)||(37397145-37397204)
chr8 (136-194)||(15042140-15042198)
chr8 (141-195)||(23123338-23123392)
chr8 (141-194)||(3463946-3463999)
chr8 (140-193)||(41662520-41662573)
chr8 (136-195)||(2856521-2856580)
chr8 (136-195)||(15444647-15444706)
chr8 (136-195)||(24473338-24473397)
chr8 (140-195)||(24473768-24473823)
chr8 (136-198)||(34313760-34313820)
chr8 (135-198)||(41662101-41662164)
chr8 (141-191)||(3307338-3307388)
chr8 (138-191)||(6199100-6199153)
chr8 (146-198)||(18019915-18019968)
chr8 (145-198)||(43162536-43162588)
chr8 (143-195)||(74688-74739)
chr8 (143-195)||(15442765-15442817)
chr8 (135-198)||(18020085-18020146)
chr8 (143-198)||(23123514-23123567)
chr8 (140-195)||(20861638-20861693)
chr8 (138-193)||(22786837-22786892)
chr8 (142-193)||(22851958-22852009)
chr8 (144-195)||(34498125-34498176)
chr8 (136-194)||(6198653-6198711)
chr8 (141-195)||(9623502-9623556)
chr8 (148-197)||(7127660-7127708)
chr8 (140-193)||(17431286-17431339)
chr8 (141-198)||(43162234-43162290)
chr8 (140-191)||(6092776-6092825)
chr8 (163-198)||(74981-75016)
chr8 (146-196)||(9465700-9465751)
chr8 (143-190)||(33726696-33726743)
chr8 (144-193)||(11007657-11007707)
chr8 (160-194)||(43598756-43598790)
chr8 (144-192)||(74864-74913)
chr8 (161-198)||(9465871-9465908)
chr8 (146-194)||(15156062-15156111)
chr8 (146-198)||(33748157-33748212)
chr8 (154-191)||(39723415-39723452)
chr8 (140-188)||(9465606-9465653)
chr8 (146-193)||(37752242-37752290)
[»] chr5 (55 HSPs)
chr5 (133-198)||(25175148-25175213)
chr5 (133-196)||(25116060-25116123)
chr5 (139-197)||(25115755-25115813)
chr5 (139-197)||(25174847-25174905)
chr5 (135-195)||(18816946-18817006)
chr5 (136-195)||(12498562-12498621)
chr5 (141-195)||(18433015-18433069)
chr5 (140-198)||(18433313-18433371)
chr5 (141-195)||(18817611-18817665)
chr5 (138-195)||(12498928-12498985)
chr5 (138-195)||(26571164-26571221)
chr5 (136-191)||(16466746-16466801)
chr5 (140-195)||(26020449-26020504)
chr5 (137-195)||(22428930-22428987)
chr5 (139-195)||(11351427-11351483)
chr5 (147-198)||(16726084-16726135)
chr5 (140-195)||(19514963-19515018)
chr5 (144-195)||(21207229-21207280)
chr5 (139-198)||(33324835-33324894)
chr5 (136-197)||(5187828-5187889)
chr5 (138-195)||(22429196-22429252)
chr5 (138-195)||(26570726-26570783)
chr5 (140-195)||(11350807-11350861)
chr5 (141-195)||(3888239-3888293)
chr5 (139-193)||(31569905-31569958)
chr5 (135-193)||(37780744-37780802)
chr5 (142-195)||(22729440-22729492)
chr5 (140-193)||(34147512-34147565)
chr5 (136-193)||(43464194-43464250)
chr5 (138-194)||(41382890-41382945)
chr5 (144-191)||(2817152-2817199)
chr5 (144-198)||(9869735-9869790)
chr5 (141-195)||(19514525-19514580)
chr5 (144-195)||(34576870-34576920)
chr5 (140-195)||(37610201-37610255)
chr5 (140-195)||(37780319-37780373)
chr5 (140-195)||(41383167-41383221)
chr5 (136-194)||(23011074-23011131)
chr5 (141-195)||(34577164-34577217)
chr5 (144-195)||(9665560-9665609)
chr5 (144-191)||(23011261-23011309)
chr5 (144-195)||(3888662-3888713)
chr5 (135-194)||(9665828-9665885)
chr5 (144-194)||(9869563-9869611)
chr5 (144-198)||(12441187-12441242)
chr5 (141-187)||(12441320-12441364)
chr5 (144-195)||(43463759-43463809)
chr5 (141-191)||(10098519-10098569)
chr5 (140-194)||(25940520-25940574)
chr5 (135-193)||(37610620-37610677)
chr5 (146-194)||(25115885-25115934)
chr5 (146-194)||(25174977-25175026)
chr5 (144-192)||(34576991-34577040)
chr5 (139-195)||(10098941-10098996)
chr5 (146-193)||(18433143-18433191)
[»] chr4 (70 HSPs)
chr4 (139-195)||(56505691-56505747)
chr4 (139-195)||(50678777-50678833)
chr4 (140-198)||(13198903-13198961)
chr4 (133-198)||(16555507-16555572)
chr4 (138-195)||(28196343-28196400)
chr4 (145-198)||(49178813-49178866)
chr4 (139-198)||(3930477-3930535)
chr4 (136-195)||(9023239-9023298)
chr4 (140-195)||(24775783-24775838)
chr4 (140-195)||(28196773-28196828)
chr4 (136-195)||(32703650-32703709)
chr4 (140-195)||(36095816-36095871)
chr4 (144-195)||(36096475-36096526)
chr4 (136-195)||(39744465-39744524)
chr4 (141-195)||(16555817-16555871)
chr4 (140-198)||(18077199-18077257)
chr4 (141-195)||(50679424-50679478)
chr4 (142-198)||(8181992-8182049)
chr4 (139-192)||(9380744-9380797)
chr4 (142-195)||(25161879-25161932)
chr4 (142-198)||(22681576-22681631)
chr4 (135-195)||(45830196-45830256)
chr4 (140-195)||(9023680-9023735)
chr4 (140-195)||(26207746-26207801)
chr4 (140-195)||(32703224-32703279)
chr4 (140-195)||(43051252-43051307)
chr4 (141-195)||(4239366-4239420)
chr4 (141-195)||(9380307-9380361)
chr4 (144-198)||(13198606-13198660)
chr4 (138-191)||(292779-292832)
chr4 (138-195)||(11241661-11241717)
chr4 (142-195)||(11529169-11529222)
chr4 (140-195)||(169012-169068)
chr4 (140-195)||(293217-293272)
chr4 (140-195)||(26207360-26207414)
chr4 (144-195)||(43050610-43050661)
chr4 (141-195)||(169439-169493)
chr4 (137-195)||(5205984-5206042)
chr4 (139-193)||(22681881-22681935)
chr4 (140-194)||(25225399-25225453)
chr4 (140-198)||(35393773-35393830)
chr4 (135-193)||(47219203-47219261)
chr4 (146-195)||(49178644-49178694)
chr4 (140-194)||(54508814-54508868)
chr4 (139-189)||(56506580-56506630)
chr4 (140-196)||(8182171-8182228)
chr4 (141-198)||(11241389-11241446)
chr4 (139-195)||(23539839-23539893)
chr4 (141-194)||(23540253-23540306)
chr4 (146-198)||(27304890-27304943)
chr4 (138-195)||(39744027-39744084)
chr4 (141-193)||(39086625-39086677)
chr4 (141-198)||(27304718-27304773)
chr4 (141-191)||(43292361-43292411)
chr4 (140-194)||(45828993-45829047)
chr4 (141-194)||(5206231-5206283)
chr4 (142-195)||(43292038-43292091)
chr4 (142-198)||(8488479-8488534)
chr4 (146-193)||(16555695-16555743)
chr4 (141-192)||(7603422-7603472)
chr4 (140-191)||(39415528-39415579)
chr4 (140-195)||(48405961-48406015)
chr4 (155-194)||(48406386-48406425)
chr4 (141-198)||(3930179-3930235)
chr4 (146-198)||(5206132-5206185)
chr4 (142-198)||(7603146-7603200)
chr4 (139-195)||(23432474-23432531)
chr4 (161-194)||(39415244-39415277)
chr4 (141-182)||(49178533-49178574)
chr4 (154-194)||(54509116-54509156)
[»] chr6 (39 HSPs)
chr6 (139-198)||(3403986-3404045)
chr6 (135-195)||(33828984-33829044)
chr6 (139-195)||(33829636-33829692)
chr6 (141-195)||(3403717-3403771)
chr6 (140-198)||(18241853-18241911)
chr6 (141-198)||(11656779-11656836)
chr6 (139-195)||(10039674-10039729)
chr6 (137-197)||(30388360-30388420)
chr6 (140-195)||(7654548-7654603)
chr6 (135-198)||(13579648-13579710)
chr6 (139-190)||(21032285-21032336)
chr6 (132-195)||(33974299-33974362)
chr6 (141-195)||(10087858-10087912)
chr6 (136-198)||(18242153-18242215)
chr6 (140-198)||(21031978-21032035)
chr6 (144-198)||(3825530-3825583)
chr6 (141-191)||(30388062-30388111)
chr6 (146-198)||(2762611-2762664)
chr6 (146-198)||(10039840-10039893)
chr6 (146-198)||(12714436-12714488)
chr6 (148-198)||(21032107-21032158)
chr6 (140-195)||(29074372-29074426)
chr6 (140-195)||(29079136-29079190)
chr6 (140-195)||(29106945-29106999)
chr6 (144-191)||(32734000-32734047)
chr6 (140-198)||(23250591-23250648)
chr6 (146-197)||(11656608-11656660)
chr6 (140-196)||(33655114-33655169)
chr6 (140-195)||(2354810-2354865)
chr6 (136-195)||(22684358-22684416)
chr6 (136-195)||(22754652-22754710)
chr6 (144-191)||(31598732-31598778)
chr6 (140-194)||(31598274-31598327)
chr6 (141-198)||(33971994-33972050)
chr6 (158-198)||(2762500-2762540)
chr6 (146-193)||(3403867-3403915)
chr6 (146-193)||(30388242-30388290)
chr6 (145-188)||(31598157-31598201)
chr6 (145-188)||(31598641-31598685)
[»] scaffold0319 (3 HSPs)
scaffold0319 (140-198)||(6393-6451)
scaffold0319 (141-198)||(6694-6750)
scaffold0319 (146-193)||(6575-6623)
[»] scaffold0192 (2 HSPs)
scaffold0192 (140-198)||(25366-25424)
scaffold0192 (146-193)||(25247-25295)
[»] chr3 (64 HSPs)
chr3 (141-195)||(20969019-20969073)
chr3 (136-198)||(10293906-10293968)
chr3 (139-195)||(48159895-48159951)
chr3 (136-194)||(1927767-1927825)
chr3 (136-198)||(18875188-18875250)
chr3 (140-198)||(20968717-20968775)
chr3 (139-195)||(40848961-40849017)
chr3 (140-196)||(47871121-47871176)
chr3 (139-194)||(18874880-18874935)
chr3 (135-194)||(27238459-27238518)
chr3 (139-194)||(45060872-45060927)
chr3 (136-195)||(48160333-48160392)
chr3 (140-195)||(53687887-53687942)
chr3 (141-195)||(47666335-47666389)
chr3 (138-195)||(1928434-1928490)
chr3 (141-194)||(8314013-8314066)
chr3 (141-198)||(10293608-10293665)
chr3 (130-195)||(27238900-27238965)
chr3 (138-194)||(8315083-8315138)
chr3 (141-197)||(17372298-17372354)
chr3 (136-195)||(21895652-21895712)
chr3 (142-194)||(22429159-22429211)
chr3 (138-190)||(42455787-42455839)
chr3 (141-195)||(42672978-42673031)
chr3 (140-194)||(53766580-53766634)
chr3 (135-192)||(26007622-26007679)
chr3 (136-193)||(47665906-47665963)
chr3 (138-194)||(1100912-1100968)
chr3 (144-195)||(13657621-13657673)
chr3 (144-198)||(14015867-14015923)
chr3 (135-195)||(14015964-14016023)
chr3 (135-195)||(42673296-42673355)
chr3 (141-189)||(45060596-45060644)
chr3 (139-194)||(1101182-1101237)
chr3 (136-195)||(10348799-10348858)
chr3 (144-198)||(17372470-17372525)
chr3 (136-195)||(24485460-24485518)
chr3 (140-195)||(26007181-26007235)
chr3 (140-195)||(40848520-40848574)
chr3 (141-195)||(3353128-3353181)
chr3 (141-195)||(3644783-3644837)
chr3 (145-194)||(4947263-4947312)
chr3 (146-198)||(4947386-4947439)
chr3 (135-195)||(17372594-17372652)
chr3 (138-195)||(36180990-36181047)
chr3 (140-192)||(17441066-17441118)
chr3 (146-193)||(18875017-18875065)
chr3 (136-192)||(53688306-53688361)
chr3 (144-198)||(1101087-1101141)
chr3 (146-192)||(9026860-9026907)
chr3 (141-196)||(13657445-13657500)
chr3 (144-195)||(23630035-23630086)
chr3 (144-195)||(53766166-53766217)
chr3 (139-193)||(3353553-3353606)
chr3 (141-195)||(9027033-9027086)
chr3 (141-195)||(21896511-21896564)
chr3 (144-198)||(26540694-26540747)
chr3 (141-191)||(42627550-42627599)
chr3 (135-188)||(10771498-10771550)
chr3 (137-198)||(14015690-14015751)
chr3 (146-194)||(20968897-20968946)
chr3 (139-195)||(47870821-47870877)
chr3 (144-195)||(3644720-3644772)
chr3 (143-195)||(22429596-22429647)
[»] scaffold0802 (3 HSPs)
scaffold0802 (141-198)||(1417-1474)
scaffold0802 (141-198)||(1118-1175)
scaffold0802 (146-194)||(1297-1346)
[»] scaffold0001 (5 HSPs)
scaffold0001 (141-198)||(438930-438987)
scaffold0001 (139-198)||(439196-439255)
scaffold0001 (140-198)||(183660-183717)
scaffold0001 (144-194)||(183367-183416)
scaffold0001 (144-191)||(183544-183592)
[»] scaffold0110 (2 HSPs)
scaffold0110 (138-198)||(45804-45863)
scaffold0110 (140-198)||(45536-45593)
[»] scaffold0328 (2 HSPs)
scaffold0328 (141-195)||(6795-6849)
scaffold0328 (141-195)||(6152-6206)
[»] scaffold0535 (1 HSPs)
scaffold0535 (140-191)||(10011-10062)
[»] scaffold0041 (1 HSPs)
scaffold0041 (140-195)||(38695-38750)
[»] scaffold0017 (1 HSPs)
scaffold0017 (141-195)||(185274-185328)
[»] scaffold0002 (1 HSPs)
scaffold0002 (141-198)||(411923-411979)
[»] scaffold0029 (2 HSPs)
scaffold0029 (140-196)||(9904-9960)
scaffold0029 (138-194)||(10320-10374)
[»] scaffold0460 (2 HSPs)
scaffold0460 (140-191)||(329-380)
scaffold0460 (141-195)||(763-816)
[»] scaffold0069 (2 HSPs)
scaffold0069 (141-196)||(50506-50560)
scaffold0069 (140-195)||(50074-50127)
[»] scaffold0009 (1 HSPs)
scaffold0009 (140-198)||(205686-205743)
[»] scaffold0376 (2 HSPs)
scaffold0376 (141-198)||(7597-7653)
scaffold0376 (140-195)||(7454-7508)
[»] scaffold0015 (2 HSPs)
scaffold0015 (141-198)||(17153-17209)
scaffold0015 (160-198)||(16870-16908)
[»] scaffold0598 (2 HSPs)
scaffold0598 (142-194)||(6877-6927)
scaffold0598 (143-193)||(6609-6659)
[»] scaffold0176 (2 HSPs)
scaffold0176 (139-195)||(20043-20099)
scaffold0176 (140-195)||(19620-19674)
[»] scaffold1221 (2 HSPs)
scaffold1221 (141-195)||(1511-1564)
scaffold1221 (144-198)||(1781-1834)
[»] scaffold0035 (2 HSPs)
scaffold0035 (142-198)||(72967-73023)
scaffold0035 (144-197)||(73089-73143)


Alignment Details
Target: chr2 (Bit Score: 108; Significance: 2e-54; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 17777463 - 17777319
Alignment:
Q  1 ctctagctttagattatatttttcatgaattaataataaataaataaata----gatctgaatttcttt-ccatttccatttaatccattttttattagg 95  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||||| ||| |||||||||||||||| |||||||||||||    
T  17777463 ctctagctttagatgatatttttcatgaattaataataaataaataaataaatagatctgaattttttttccatttccatttaatcaattttttattagg 17777364  T
Q  96 actaaaagcaaaaaatcttaatattgtgagctgcataagatttta 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  17777363 actaaaagcaaaaaatcttaatattgtgagctgcataagatttta 17777319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 30190921 - 30190980
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30190921 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 30190980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 20347519 - 20347461
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20347519 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 20347461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 11883622 - 11883680
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11883622 aggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 11883680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 26841583 - 26841641
Alignment:
Q  137 tttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26841583 tttaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 26841641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 11883980 - 11883923
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11883980 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 11883923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 41790973 - 41790912
Alignment:
Q  134 gattttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  41790973 gattttaggcttaattgcacttttcccccctatattttgccaattgtgcgattttgcccccc 41790912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 2639538 - 2639482
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2639538 taggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 2639482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 5378656 - 5378715
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  5378656 ttttaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 5378715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 6171511 - 6171456
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6171511 aggcttaattgcacttttcccccctatcttttgccaattgtgggattttgcacccc 6171456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 18296748 - 18296693
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18296748 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 18296693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 24832330 - 24832385
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24832330 aggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 24832385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 2638819 - 2638874
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  2638819 aggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 2638874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 17850973 - 17851032
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  17850973 tttttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 17851032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 37720203 - 37720258
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  37720203 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37720258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 26842292 - 26842238
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  26842292 ggcttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 26842238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 30191284 - 30191222
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  30191284 tttttggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctc 30191222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 40469780 - 40469726
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  40469780 ttaattgcactttttccccctatcttttgctaattgtgcgattttgcaccccctc 40469726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 18296077 - 18296130
Alignment:
Q  142 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  18296077 gcttaattgtacttttcacccctatcttttgccaattgtgcgattttgcacccc 18296130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 5380015 - 5379959
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  5380015 taggcttaattgcacttttcccccctatagtttaccaattgtgcgattttgcacccc 5379959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 7591204 - 7591255
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  7591204 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcacccc 7591255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 8851151 - 8851202
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  8851151 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 8851202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 8851637 - 8851582
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  8851637 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 8851582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 26737840 - 26737781
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| |||||||||||||||||| |||||||||||||| || ||||||||||||||||||    
T  26737840 tttttggcttaattgcacttttcacccctatcttttgctaactgtgcgattttgcacccc 26737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 40469422 - 40469484
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||| |||||||||| | ||||||| |||||||||||| ||||||||||||||||||||||||    
T  40469422 tttttggcttaattgtatttttccctcctatcttttgctaattgtgcgattttgcaccccctc 40469484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 6495776 - 6495723
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    |||||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  6495776 aggcttaattgcacttttcctccctatcttttgtgaattgtgcgattttgcacc 6495723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 29230277 - 29230334
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    |||||||||||||||||||||||| | |||||||||| |||||||| |||||||||||    
T  29230277 ttttaggcttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29230334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 32673193 - 32673141
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 197  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  32673193 ttaattgcactttttcccc-tatcttttgccaattgtgcgattttgcaccccct 32673141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 7664246 - 7664302
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||||||||  |||  ||||||||||||||||||||||    
T  7664246 taggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcacccc 7664302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 20347161 - 20347217
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||| ||||||||||| ||||||||||  |||||||||||||||||||||    
T  20347161 taggcttaattacacttttcccctctatcttttgttaattgtgcgattttgcacccc 20347217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 7664732 - 7664673
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| ||||||||||||||||||| ||||||  |||| ||||||||||||||||||||||    
T  7664732 tttttggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcacccc 7664673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 26692871 - 26692820
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  26692871 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 26692820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 26737481 - 26737537
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||| ||  |||||||||| ||||||||||||||||||||||||    
T  26737481 aggcttaattgcacttttctcc--tatcttttgctaattgtgcgattttgcaccccctc 26737537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 6325399 - 6325349
Alignment:
Q  143 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    |||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  6325399 cttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacc 6325349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 15920781 - 15920835
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||| |||||||||| |||||||||||  ||||||||||||||||||||||||    
T  15920781 ttaatttcacttttccctcctatcttttgttaattgtgcgattttgcaccccctc 15920835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 16910827 - 16910881
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||| | |  |||||||||||||||||||||||||||    
T  16910827 ggcttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcacccc 16910881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 43495308 - 43495366
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||||| ||||| |||||| |||||||||||||| || ||||||    
T  43495308 aggcttaattgcacttttcccacctatattttgctaattgtgcgatttttcatcccctc 43495366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 6171156 - 6171207
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||||||    
T  6171156 ggcttaattgcacttttcccc-ctatcttttgttaattgtgcgattttgcacc 6171207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 18055376 - 18055316
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||| || |||||||||||||| ||| ||| |||||| ||||||||||||||||||||||    
T  18055376 atttttggtttaattgcactttttccctctaccttttgtcaattgtgcgattttgcacccc 18055316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 6324924 - 6324967
Alignment:
Q  148 ttgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  6324924 ttgcacttttcccccctatagtttgccaattgtgcgattttgca 6324967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 7591909 - 7591850
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| ||||||||||||  |||| | ||||||||||| ||||||||||||||||||||||    
T  7591909 tttttggcttaattgcatctttcactcctatcttttgtcaattgtgcgattttgcacccc 7591850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 198
Target Start/End: Original strand, 18055050 - 18055103
Alignment:
Q  143 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  18055050 cttaattgcacttttccccc-ta-cttttgctaattgtgcgattttgcaccccctc 18055103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 18055169 - 18055224
Alignment:
Q  144 ttaattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||| | ||||||  |||||||||||||||||||||||||||||||    
T  18055169 ttaattgcacttttgcaccctataattttgccaattgtgcgattttgcaccccctc 18055224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 43495535 - 43495481
Alignment:
Q  144 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||| |||||||| | |||||||||||||||||||||||||    
T  43495535 ttaattgcacttttccccc-tatctttttgtcaattgtgcgattttgcaccccctc 43495481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 15321515 - 15321565
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    ||||||||||||||  |||||||||||| |||| |||||||||||||||||    
T  15321515 ttaattgcacttttgtcccctatctttttccaactgtgcgattttgcaccc 15321565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 16911326 - 16911269
Alignment:
Q  137 tttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| ||||||||||||||| | |||||||  |||||||||||||||||||||||||||    
T  16911326 tttaagcttaattgcacttt-cgcccctatagtttgccaattgtgcgattttgcacccc 16911269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 29343575 - 29343633
Alignment:
Q  136 ttttaggctt-aattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    |||||||||| |||||||||||||| | |||||||||| |||||||| |||||||||||    
T  29343575 ttttaggctttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29343633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 26737706 - 26737657
Alignment:
Q  146 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 194  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  26737706 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccc 26737657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 43495658 - 43495602
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||| ||| ||||| |||||| ||||||||||||||||| ||||||    
T  43495658 ggcttaattgcacttt-cccacctatattttgctaattgtgcgattttgcatcccctc 43495602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 6495468 - 6495519
Alignment:
Q  142 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||||||||||||||||| ||||||| ||||  ||||||||||||||||||||    
T  6495468 gcttaattgcacttttcctccctatc-tttgttaattgtgcgattttgcaccc 6495519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 17346091 - 17346032
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||| ||   |||||||||| ||||||||||||||||||| ||||    
T  17346091 ttaggcttaattgcactttttcctt-tatcttttgctaattgtgcgattttgcacctcctc 17346032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 19141446 - 19141497
Alignment:
Q  143 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||| ||||||||  |||||||||||||| ||||||||||||    
T  19141446 cttaattgcactttttccccctatagtttgccaattgtgc-attttgcacccc 19141497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 40221313 - 40221364
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    ||||||||||||| ||||||| ||||||||||| |||||| ||||||||||||    
T  40221313 ggcttaattgcacctttcccc-ctatcttttgctaattgttcgattttgcacc 40221364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 40469655 - 40469607
Alignment:
Q  146 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcacc 193  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||||||    
T  40469655 aattgcacttttcccccttatcgttttgctaattgtgcgattttgcacc 40469607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 5793450 - 5793497
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    ||||||||||||||||||| | |  |||||||||||||||||||||||    
T  5793450 ttaattgcacttttcccccttgtagtttgccaattgtgcgattttgca 5793497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 17345736 - 17345788
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||  |||||||||| |||| ||| |||||||||||||||    
T  17345736 ttaattgcacttttcccc--tatcttttgctaattatgcaattttgcaccccctc 17345788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 26692399 - 26692450
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||| ||| ||||  |||| ||||||||||||||||||||||    
T  26692399 ttaattgcactttttccctctatagtttgtcaattgtgcgattttgcacccc 26692450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 32672836 - 32672895
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    ||||| |||||||||||||||||   || |||||||||  ||||||||||||||||||||    
T  32672836 atttttggcttaattgcacttttgttccttatcttttgttaattgtgcgattttgcaccc 32672895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 7979560 - 7979619
Alignment:
Q  134 gattttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||| |||||||||||  ||| |||  |||| ||||||||||||||||||||||    
T  7979560 gattttaggctttattgcactttt--cccttatagtttgacaattgtgcgattttgcacccc 7979619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 15321387 - 15321446
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 197  Q
    |||||| |||||||||||||||  |||||||||||||  |||||||| |||||||| |||||    
T  15321387 ttttagacttaattgcactttt--cccctatcttttgttaattgtgcaattttgcatcccct 15321446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 18750183 - 18750126
Alignment:
Q  137 tttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| |||||||||||||| |||||| |||  |||| ||||||||||||||||||||||    
T  18750183 tttaagcttaattgcacttctccccc-tatagtttgtcaattgtgcgattttgcacccc 18750126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 40221538 - 40221488
Alignment:
Q  146 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacccc 195  Q
    |||||| ||||| ||||||||||||| || |||||||||||||||||||||    
T  40221538 aattgcgcttttgccccctatctttttgctaattgtgcgattttgcacccc 40221488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 32673069 - 32673020
Alignment:
Q  146 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 194  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  32673069 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 32673020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 11883751 - 11883799
Alignment:
Q  146 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 193  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  11883751 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 11883799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 19141898 - 19141853
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    |||||||||||||  ||||||||  |||||||||||||||||||||||    
T  19141898 ttaattgcacttt--ccccctatagtttgccaattgtgcgattttgca 19141853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 6e-27; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 9412383 - 9412322
Alignment:
Q  137 tttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9412383 tttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 9412322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 3687710 - 3687653
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3687710 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 3687653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 44599483 - 44599543
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44599483 atttttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 44599543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 13772961 - 13772898
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  13772961 atttttggcttaattgcacttttcccccctatcatttgctaattgtgcgattttgcaccccctc 13772898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 13863308 - 13863367
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  13863308 ttttaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 13863367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 44600190 - 44600135
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44600190 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 44600135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 135 - 196
Target Start/End: Original strand, 9034861 - 9034922
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 196  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  9034861 attttaggcttaattgcacttttcccccctataatttgccaattgtgcgattctgcaccccc 9034922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 10533032 - 10533088
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  10533032 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 10533088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 37888827 - 37888887
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  37888827 atttttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37888887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 37889315 - 37889259
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  37889315 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37889259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 20418883 - 20418942
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  20418883 ttttaggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 20418942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 37972451 - 37972396
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  37972451 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37972396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 8643824 - 8643766
Alignment:
Q  137 tttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  8643824 tttaggcttaattgcacttttcatccctatcttttaccaattgtgcgattttgcacccc 8643766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 9035347 - 9035293
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  9035347 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 9035293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 9412022 - 9412080
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  9412022 aggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctc 9412080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 13772638 - 13772695
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  13772638 ttaggcttaattgcacttttcctccctatcttttgctaattgtgtgattttgcacccc 13772695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 23686776 - 23686723
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 189  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  23686776 ttttaggcttaattgcactttttccccctatcttttgctaattgtgcgattttg 23686723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 3687347 - 3687411
Alignment:
Q  135 attttaggcttaattgcacttttcccc-cctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||| ||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||    
T  3687347 atttttggcttaattgcacttttccccccctatcttttgttaattgtgcgattttgcaccccctc 3687411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 3205148 - 3205093
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  3205148 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 3205093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 187
Target Start/End: Complemental strand, 13864011 - 13863964
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattt 187  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13864011 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattt 13863964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 17156966 - 17157021
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  17156966 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 17157021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 20419379 - 20419324
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  20419379 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 20419324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 22740155 - 22740210
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  22740155 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 22740210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 29292921 - 29292972
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  29292921 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 29292972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 46816369 - 46816311
Alignment:
Q  137 tttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||| ||| ||||||||| |||||| ||||||||||||||||    
T  46816369 tttaggcttaattgcactttttcccgctatcttttaccaattatgcgattttgcacccc 46816311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 37971957 - 37972014
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||| ||||| |  |||||||||||||||||||||||||||    
T  37971957 ttaggcttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcacccc 37972014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 18863970 - 18864021
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  18863970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 18864021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 29293400 - 29293349
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 192  Q
    |||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  29293400 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcac 29293349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 5735253 - 5735303
Alignment:
Q  142 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 192  Q
    ||||||||||||||||| ||||||||||| || ||||||||||||||||||    
T  5735253 gcttaattgcacttttctcccctatctttggctaattgtgcgattttgcac 5735303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 6908208 - 6908265
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||||||||||||||||||||| |||||||||| |||  ||||||||||||||||||||    
T  6908208 ttttaggcttaattgcactttt-ccccctatctattgttaattgtgcgattttgcaccc 6908265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 13741557 - 13741611
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||| |||||||||||||  ||| |||||||||||||||||||||||    
T  13741557 ggcttaattgcatttttcccccctatagtttaccaattgtgcgattttgcacccc 13741611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 18925057 - 18925114
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    |||| ||||||||||||||||||  ||||||||||||| |||||||| ||||||||||    
T  18925057 tttttggcttaattgcacttttcttccctatcttttgctaattgtgcaattttgcacc 18925114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 38826968 - 38826915
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    ||||||||||||| |||||||||||||  |||| ||||||||||||||||||||    
T  38826968 aggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacc 38826915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 8953941 - 8953886
Alignment:
Q  142 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||||| |||||||||  |||||||| |||||||||||||||    
T  8953941 gcttaattgcacttttccccc-tatcttttgttaattgtgcaattttgcaccccctc 8953886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 33628716 - 33628660
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||| |||||||||||| ||| ||||||||| | |||||||||||||||||||||    
T  33628716 taggctaaattgcactttttccctctatcttttactaattgtgcgattttgcacccc 33628660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 3204669 - 3204721
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||  ||||||||  |||||||||||||||||||||||||||    
T  3204669 ggcttaattgcacttt--ccccctatagtttgccaattgtgcgattttgcacccc 3204721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 13744287 - 13744233
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  13744287 aggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 13744233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 16199032 - 16198977
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||| |||  |||  |||||||||||||||||||||||||||    
T  16199032 aggcttaattgcactttttcccattatagtttgccaattgtgcgattttgcacccc 16198977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 18925280 - 18925229
Alignment:
Q  145 taattgcacttttcccccctatctttt-gccaattgtgcgattttgcacccc 195  Q
    |||||| |||||| ||||||||||||| ||||||||||||||||||||||||    
T  18925280 taattgaacttttgccccctatctttttgccaattgtgcgattttgcacccc 18925229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 27096168 - 27096223
Alignment:
Q  144 ttaattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||||||| ||||||    
T  27096168 ttaattgcacttttgccccctatctttttaccaattgtgcgattttgcaacccctc 27096223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 27182135 - 27182080
Alignment:
Q  144 ttaattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||||||| ||||||    
T  27182135 ttaattgcacttttgccccctatctttttaccaattgtgcgattttgcaacccctc 27182080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 198
Target Start/End: Original strand, 29291808 - 29291863
Alignment:
Q  143 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||| | ||||||||||||  |||| |||||||||||||||||||    
T  29291808 cttaattgcactttttctccctatcttttgataattatgcgattttgcaccccctc 29291863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 6908534 - 6908485
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    ||||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  6908534 ttaattgcacttt-cccccctattttttgctaattgtgcgattttgcaccc 6908485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 18864457 - 18864404
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    |||||||||||| ||||||||||| |||  |||||||||||||||||||||||||    
T  18864457 taggcttaattgtacttttccccc-tatagtttgccaattgtgcgattttgcacc 18864404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 23686416 - 23686473
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||| ||||||||||||||||||||| ||||||||||| |||||| | |||||||||||    
T  23686416 tttttggcttaattgcacttttcccc-ctatcttttgctaattgtacaattttgcaccc 23686473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 27096392 - 27096339
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||||| ||||||    
T  27096392 ttaattgcacttttccccc-tatcttttgtcaattgtgtgattttgcatcccctc 27096339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 27181911 - 27181964
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||| |||||||||| |||||||| ||||||||| ||||||    
T  27181911 ttaattgcacttttcccc-ctatcttttgtcaattgtgtgattttgcatcccctc 27181964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 48359320 - 48359373
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  48359320 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 48359373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 27096042 - 27096094
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 189  Q
    |||| |||||||||||||||| ||||||||| |||||| |||||||||||||||    
T  27096042 tttttggcttaattgcacttt-cccccctatattttgctaattgtgcgattttg 27096094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 27182261 - 27182209
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 189  Q
    |||| |||||||||||||||| ||||||||| |||||| |||||||||||||||    
T  27182261 tttttggcttaattgcacttt-cccccctatattttgctaattgtgcgattttg 27182209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 29292095 - 29292038
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||  || ||| ||||||| |||||||||||||| |||||||||    
T  29292095 ggcttaattgcacttttttcctctaacttttgctaattgtgcgattttccaccccctc 29292038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 34235737 - 34235778
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtg 181  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  34235737 aggcttaattgcacttttccctcccatcttttgccaattgtg 34235778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 34236030 - 34235977
Alignment:
Q  143 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 196  Q
    |||||||| | |||||||  ||||||||||| ||||||||||||||||||||||    
T  34236030 cttaattgtatttttcccttctatcttttgctaattgtgcgattttgcaccccc 34235977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 35079960 - 35080012
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    ||||||||||||||||||||| ||||||||||| ||||||| | ||||||||||    
T  35079960 ggcttaattgcacttttcccc-ctatcttttgctaattgtggggttttgcaccc 35080012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 189
Target Start/End: Original strand, 42418590 - 42418639
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 189  Q
    |||||||||| ||||||||||||||||  ||||| |||||||||||||||    
T  42418590 aggcttaatttcacttttcccccctatagtttgctaattgtgcgattttg 42418639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 42419084 - 42419028
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 196  Q
    |||| ||||||||||||||||||| |||  ||||||||||||||| ||||||||||||    
T  42419084 taggtttaattgcacttttccccc-tatagtttgccaattgtgcgtttttgcaccccc 42419028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 5349784 - 5349733
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||   |||||||||||||  |||||||||||||||||||||    
T  5349784 ggcttaattgcacttt---cccctatcttttgttaattgtgcgattttgcacccc 5349733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 15567327 - 15567276
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    |||| ||||||||||||||||||||||||||||||   | |||||||||||||||    
T  15567327 taggtttaattgcacttttcccccctatcttttgc---tagtgcgattttgcacc 15567276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 194
Target Start/End: Original strand, 5735382 - 5735429
Alignment:
Q  148 ttgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 194  Q
    |||||||||| | ||||||||||| |||||||||||||||||||||||    
T  5735382 ttgcactttttctccctatctttttgccaattgtgcgattttgcaccc 5735429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 22740641 - 22740591
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  22740641 ttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 22740591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 30857959 - 30857904
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||  | | ||||||||| ||||||||| ||||||||||||    
T  30857959 aggcttaattgcacttttgtctcttatcttttgtcaattgtgcaattttgcacccc 30857904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 18925373 - 18925322
Alignment:
Q  142 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||| |  ||| |||||| |||||||||||||||||||||    
T  18925373 gcttaattgcacttttcctc--tatattttgctaattgtgcgattttgcacccc 18925322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 38191387 - 38191440
Alignment:
Q  145 taattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||| |||| |||||||| |||||||||||||||||||||| ||||    
T  38191387 taattgcactttttcccc-tatctttttgccaattgtgcgattttgcacctcctc 38191440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 39983700 - 39983754
Alignment:
Q  142 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 196  Q
    ||||||||||||||||||||| ||||||||   |||| |||||||| ||||||||    
T  39983700 gcttaattgcacttttcccccttatcttttattaattatgcgatttcgcaccccc 39983754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 5735598 - 5735553
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttg 189  Q
    |||||||||||||| |||||||||||||   |||||||||||||||    
T  5735598 ttaattgcactttttccccctatcttttattaattgtgcgattttg 5735553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 6908440 - 6908391
Alignment:
Q  146 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 194  Q
    |||||| ||||| ||||||||||||| || ||||||||||||||||||||    
T  6908440 aattgcgcttttaccccctatctttttgctaattgtgcgattttgcaccc 6908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 38191619 - 38191566
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||||||||||| ||||  |||||||||||||  |||| |||||||||||||||    
T  38191619 ggcttaattgcattttttacccctatcttttgttaattatgcgattttgcaccc 38191566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 4e-25; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 47955305 - 47955363
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47955305 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 47955363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 8109048 - 8108993
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8109048 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 8108993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 48190766 - 48190825
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  48190766 tttttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 48190825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 49284408 - 49284463
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  49284408 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 49284463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 44911021 - 44911079
Alignment:
Q  137 tttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  44911021 tttaggcttaattgcactttccccccctatattttgccaattgtgcgattttgcacccc 44911079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 9347120 - 9347180
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  9347120 atttttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 9347180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 32163099 - 32163043
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  32163099 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 32163043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 48191411 - 48191355
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  48191411 taggcttaattgcacttttcacccctatcttttgccaatggtgcgattttgcacccc 48191355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 198
Target Start/End: Complemental strand, 17518653 - 17518599
Alignment:
Q  143 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17518653 cttaattgcacttttccccc-tatcttttgccaattgtgcgattttgcaccccctc 17518599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 39692055 - 39692000
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  39692055 aggcttaattgcacttttcccccctatattttgtcaattgtgcgattttgcacccc 39692000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 47955664 - 47955605
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  47955664 taggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctc 47955605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 13589713 - 13589656
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  13589713 aggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcaccccctc 13589656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 22149750 - 22149701
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22149750 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 22149701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 41082909 - 41082966
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||    
T  41082909 ggcttaattgtactttttccccctatcttttgccaattgtgcgattttgcatcccctc 41082966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 6002232 - 6002291
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  6002232 tttttggcttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcacccc 6002291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 19008809 - 19008750
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||||||  |||  ||||||||||||||||||||||    
T  19008809 ttttaggcttaattgcacttttcccccctatagtttcgcaattgtgcgattttgcacccc 19008750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 31848248 - 31848189
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||| |||||||||||||  |||||| |||||||||||||||||    
T  31848248 taggcttaattgcacttttctcccctatcttttgttaattgtacgattttgcaccccctc 31848189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 50430132 - 50430081
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  50430132 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 50430081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 1176839 - 1176893
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  1176839 ttaattgcacttttaccccctatcttttgtcaattgtgcaattttgcaccccctc 1176893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 8108719 - 8108777
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 197  Q
    |||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  8108719 taggtttaattgcacttttcctccctatcttttgttaattgtgcgattttgcaccccct 8108777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 48105170 - 48105116
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  48105170 ggcttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacccc 48105116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 26814688 - 26814748
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||| ||||||||||||||||||| ||||||  |||| ||||||||||||||||||||||    
T  26814688 atttttggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcacccc 26814748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 26815175 - 26815119
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||||||||  |||  ||||||||||||||||||||||    
T  26815175 taggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcacccc 26815119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 28633718 - 28633774
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||| |||  |||||||||||| ||||||||||||||    
T  28633718 taggcttaattgcacttttcccccttatagtttgccaattgtacgattttgcacccc 28633774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 28634213 - 28634157
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| |||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  28634213 taggtttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 28634157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 39690791 - 39690847
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    ||||||||| |||||||||| |||||||| ||| |||||||||||||||||||||||    
T  39690791 ttaggcttagttgcactttttccccctatatttggccaattgtgcgattttgcaccc 39690847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 46823846 - 46823894
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 192  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcac 46823894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 50526524 - 50526472
Alignment:
Q  143 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  50526524 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 50526472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 4692488 - 4692433
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||| ||||||||  |||||||||||||| ||||||||||||    
T  4692488 aggcttaattgcactttttccccctatagtttgccaattgtgcaattttgcacccc 4692433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 13918441 - 13918500
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| ||||||||||||||||| || |||||  |||||||||||||||||||||||||||    
T  13918441 tttttggcttaattgcactttttcctcctatagtttgccaattgtgcgattttgcacccc 13918500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 13918920 - 13918869
Alignment:
Q  142 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    |||||||||||||||||| ||||||  |||||||||||||||||||||||||    
T  13918920 gcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacc 13918869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 20371406 - 20371352
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 196  Q
    |||||||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  20371406 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcaccccc 20371352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 27172111 - 27172169
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| |||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  27172111 tttttggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcacccc 27172169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 27172596 - 27172545
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    ||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  27172596 aggcttaattgcacttttcccccctgtactttgccaattgtgcgattttgca 27172545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 41083266 - 41083208
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||||||| |||||||||  | ||||||||||||||||||||||    
T  41083266 taggcttaattgcacttttccccc-tatcttttgttagttgtgcgattttgcaccccctc 41083208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 48104681 - 48104732
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  48104681 ttaattgcacttttcccccctatagtttggcaattgtgcgattttgcacccc 48104732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 1177074 - 1177016
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 197  Q
    |||| |||||||||||||||| |||||||||| || |||||||| ||||||||||||||    
T  1177074 taggtttaattgcacttttcctccctatctttcgctaattgtgcaattttgcaccccct 1177016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 6703454 - 6703512
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    ||||||||||||||||||||||| || |||||  ||| |||||||||||||||||||||    
T  6703454 attttaggcttaattgcactttttcctcctatagtttaccaattgtgcgattttgcacc 6703512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 6703948 - 6703894
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||| |||||||  |||||||||||||| ||||||||||||    
T  6703948 ggcttaattgcacttttctcccctatagtttgccaattgtgcaattttgcacccc 6703894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 17518298 - 17518359
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||| |||||||  |||||||||  ||||||||||||||||||||||||    
T  17518298 ttttaggcttaattgcacctttcccct-tatcttttgttaattgtgcgattttgcaccccctc 17518359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 50615239 - 50615289
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 190  Q
    |||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  50615239 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50615289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 50623067 - 50623117
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 190  Q
    |||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  50623067 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 20480665 - 20480613
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||||||||||||||||||||| |||  ||||||||||||||||||||||||||    
T  20480665 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcaccc 20480613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 42611188 - 42611237
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  42611188 ttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacc 42611237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 6002946 - 6002894
Alignment:
Q  143 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||  |||||||||||  ||||||||||||||||||||||    
T  6002946 cttaattgcacttttcatccctatcttttcgcaattgtgcgattttgcacccc 6002894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 9347606 - 9347551
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||| |||||||||  |||||||||||||| ||||||||||||    
T  9347606 taggcttaattgcacttt-cccccctatagtttgccaattgtgcaattttgcacccc 9347551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 20480167 - 20480221
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  20480167 aggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 20480221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 44911493 - 44911438
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||||||||||||||||    
T  44911493 taggtttaattgcattttttccccctatagtttgccaattgtgcgattttgcaccc 44911438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 46824333 - 46824278
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||| || |||||  |||||||||||||| ||||||||||||    
T  46824333 aggcttaattgcactttttcctcctatagtttgccaattgtgcaattttgcacccc 46824278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 1176717 - 1176766
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  1176717 ggcttaattgcacttt-cccccctatattttgctaattgtgcgattttgca 1176766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 19007734 - 19007783
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 190  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||||||||    
T  19007734 aggcttaattgcacttt-cccccctatagtttgccaattgtgcgattttgc 19007783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 21687025 - 21687079
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||||||  |||| ||||||||  ||||||||||||    
T  21687025 ggcttaattgcacttttcccccctatagtttgtcaattgtgtaattttgcacccc 21687079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 22149402 - 22149458
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||||||| ||||||| |  ||||||||||||||||||||||||    
T  22149402 aggcttaattgcacttttccccc-tatctttggt-aattgtgcgattttgcaccccctc 22149458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 49318219 - 49318170
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    |||||||||||||||| |||||||||  |||||||||||||||||||||||    
T  49318219 ggcttaattgcacttt-cccccctatagtttgccaattgtgcgattttgca 49318170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 50615674 - 50615621
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  50615674 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 50615621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 50623502 - 50623449
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  50623502 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 50623449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 42611665 - 42611616
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||    
T  42611665 ttaattgcacttttctcccctatagtttgtcaattgtgcgattttgcacc 42611616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 999580 - 999529
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    |||||||||||||||||||| |||||||   ||||||||||||||||||||||    
T  999580 taggcttaattgcacttttc-cccctatagattgccaattgtgcgattttgca 999529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 31848019 - 31848067
Alignment:
Q  144 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgca 191  Q
    |||||||||||||| ||| ||||||||| ||||||||||||||||||||    
T  31848019 ttaattgcacttttgccctctatctttttgccaattgtgcgattttgca 31848067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 46056904 - 46056953
Alignment:
Q  142 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    |||||||||||||||  ||||||||||||||| |||| ||||||||||||||    
T  46056904 gcttaattgcacttt--ccccctatcttttgctaattttgcgattttgcacc 46056953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 50949621 - 50949569
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    ||||| |||||||||||| |||||||||  |||| ||||||||||||||||||    
T  50949621 taggcataattgcactttccccccctatagtttgtcaattgtgcgattttgca 50949569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 31847898 - 31847945
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    ||||||||||||| ||||| |||||||||| |||||||| ||||||||    
T  31847898 ttaattgcactttacccccttatcttttgctaattgtgcaattttgca 31847945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 33085670 - 33085725
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||| |||||||| |||||| ||||| |||||||  |||||||||||||    
T  33085670 aggcttaattgtacttttccaccctatattttgtcaattgtttgattttgcacccc 33085725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 48313847 - 48313792
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||| |||||| |||  |||||||||| |||||||| ||||||||||||    
T  48313847 aggcttaattgtactttttcccattatcttttgctaattgtgcaattttgcacccc 48313792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 195
Target Start/End: Complemental strand, 49285086 - 49285055
Alignment:
Q  164 tatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||||||||||||    
T  49285086 tatcttttgccaattgtgcgattttgcacccc 49285055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 22149630 - 22149580
Alignment:
Q  144 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 193  Q
    |||||||||||||| |||| |||||||| || |||||||||||||||||||    
T  22149630 ttaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 22149580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 49317752 - 49317801
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    ||||||||||||||||| ||||||||  |||||||||||||| ||||||||    
T  49317752 ggcttaattgcactttt-ccccctatagtttgccaattgtgcaattttgca 49317801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 17518530 - 17518481
Alignment:
Q  146 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 194  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  17518530 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 17518481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 46057019 - 46057068
Alignment:
Q  144 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcac 192  Q
    ||||||||| |||| |||||||| |||| |||||||||||||||||||||    
T  46057019 ttaattgcaattttgccccctatttttttgccaattgtgcgattttgcac 46057068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 47498547 - 47498495
Alignment:
Q  142 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||| |||  |||| |||||||||| |||||||||||    
T  47498547 gcttaattgcacttttccccc-tatagtttgtcaattgtgcggttttgcacccc 47498495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 50429655 - 50429708
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    ||||||||||| ||||||||||  |||  ||||| |||||||||||||||||||    
T  50429655 aggcttaattgtacttttcccctttataatttgctaattgtgcgattttgcacc 50429708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 50949164 - 50949213
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    ||||||| ||||||||| |||||  | |||||||||||||||||||||||    
T  50949164 ttaattgtacttttccctcctatagtctgccaattgtgcgattttgcacc 50949213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 20371039 - 20371092
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||  ||||||||  |||| ||||||||| ||||||||||||    
T  20371039 aggcttaattgcacttt--ccccctatagtttgtcaattgtgcaattttgcacccc 20371092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 21687520 - 21687473
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 189  Q
    |||||||| ||||||||||||| |||  |||||||||||||||||||||    
T  21687520 ggcttaatagcacttttccccc-tataatttgccaattgtgcgattttg 21687473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 191
Target Start/End: Original strand, 47498296 - 47498349
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    |||| ||||||||||||||||  ||||||||  |||||||||||||| ||||||||    
T  47498296 tttttggcttaattgcacttt--ccccctatagtttgccaattgtgcaattttgca 47498349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 1e-24; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 41662457 - 41662400
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41662457 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 41662400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 198
Target Start/End: Original strand, 765736 - 765791
Alignment:
Q  143 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  765736 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 765791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 12281123 - 12281181
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12281123 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacctcctc 12281181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 15156239 - 15156182
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15156239 ggcttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcaccccctc 15156182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 16928938 - 16928999
Alignment:
Q  137 tttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  16928938 tttaggcttaattgcactttccccccctatcttttgctaattgtgcgattttgcaccccctc 16928999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 13026631 - 13026687
Alignment:
Q  137 tttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13026631 tttaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacc 13026687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 15155880 - 15155940
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  15155880 ttaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 15155940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 9823416 - 9823361
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9823416 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 9823361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 39724107 - 39724048
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  39724107 tttttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 39724048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 43246231 - 43246173
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  43246231 aggcttaattgcacttttcccccctatcttttgctaattgtgtgattttgcaccccctc 43246173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 16929296 - 16929239
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  16929296 ggcttaattgcacttttctcccctatcttttgctaattgtgcgattttgcaccccctc 16929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 37752470 - 37752413
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  37752470 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 37752413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 13027341 - 13027281
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13027341 atttttggtttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 13027281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 22851385 - 22851444
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  22851385 tttttggcttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc 22851444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 12281485 - 12281423
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||| |||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  12281485 tttttggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctc 12281423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 34498613 - 34498555
Alignment:
Q  137 tttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  34498613 tttaggcttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcacccc 34498555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 37752084 - 37752138
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  37752084 ggcttaattgcacttttcccccctatgttttgctaattgtgcgattttgcacccc 37752138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 37396705 - 37396762
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||    
T  37396705 ttaggcttaattgcacttttcccccctatagtttgccgattgtgcgattttgcacccc 37396762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 43245871 - 43245928
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  43245871 ggcttaattgcactttttccccctatcttttgataattgtgcgattttgcaccccctc 43245928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 13937445 - 13937389
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||    
T  13937445 taggcttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcacccc 13937389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 25438794 - 25438846
Alignment:
Q  143 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  25438794 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 25438846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 9822743 - 9822802
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| |||||||||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  9822743 tttttggcttaattgcacttttcacccctatcttttatcaattgtgcgattttgcacccc 9822802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 13936722 - 13936776
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  13936722 aggcttaattgcacttttcccc-ctatcttttaccaattgtgcgattttgcacccc 13936776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 37397204 - 37397145
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  37397204 tttttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcccccc 37397145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 15042140 - 15042198
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    ||||||| ||||||||||||| ||||| |||||||||||||||||| ||||||||||||    
T  15042140 ttttaggtttaattgcactttccccccttatcttttgccaattgtgtgattttgcaccc 15042198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 23123338 - 23123392
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  23123338 ggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttacacccc 23123392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 3463999 - 3463946
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| ||||||||    
T  3463999 ggcttaattgcacttttcccccctatattttgctaattgtgcgatcttgcaccc 3463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 41662520 - 41662573
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  41662520 aggcttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacc 41662573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 2856521 - 2856580
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||| | |||||| ||||||  |||||||||||||||||||||||||||    
T  2856521 ttttaggcttaattgtaattttcctccctatagtttgccaattgtgcgattttgcacccc 2856580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 15444706 - 15444647
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||| |||||||||||||| ||||||||  ||| |||||||||||||||||||||||    
T  15444706 ttttaggtttaattgcactttttccccctataatttaccaattgtgcgattttgcacccc 15444647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 24473338 - 24473397
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| ||||||||||||||||| ||||||||  ||||||||||||| |||||||||||||    
T  24473338 tttttggcttaattgcactttttccccctatagtttgccaattgtgtgattttgcacccc 24473397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 24473823 - 24473768
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||  ||||||  |||||||||||||||||||||||||||    
T  24473823 aggcttaattgcacttttcatccctatagtttgccaattgtgcgattttgcacccc 24473768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 34313760 - 34313820
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||| |||||||||||||||||||||  |||||||||  ||||||||||||||||||||||||    
T  34313760 tttttggcttaattgcacttttcccc--tatcttttgttaattgtgcgattttgcaccccctc 34313820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 41662101 - 41662164
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||| |||||||||||||| ||| |||| |||||||||  ||||||||||||||||||||||||    
T  41662101 atttaaggcttaattgcacattttccccatatcttttgttaattgtgcgattttgcaccccctc 41662164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 3307338 - 3307388
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    |||||||||||| ||||| ||||||||||||| ||||||||||||||||||    
T  3307338 ggcttaattgcatttttcacccctatcttttgtcaattgtgcgattttgca 3307388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 6199153 - 6199100
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    |||||||||||||||||||||  ||||||  |||||||||||||||||||||||    
T  6199153 ttaggcttaattgcacttttcttccctatagtttgccaattgtgcgattttgca 6199100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 18019915 - 18019968
Alignment:
Q  146 aattgcacttttcccccctatcttttgcc-aattgtgcgattttgcaccccctc 198  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  18019915 aattgcacttttgccccctatctttttcctaattgtgcgattttgcaccccctc 18019968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 43162588 - 43162536
Alignment:
Q  145 taattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||||||||||||    
T  43162588 taattgcacttttccccc-tatcttttgtcaatcgtgcgattttgcaccccctc 43162536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 74688 - 74739
Alignment:
Q  143 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||| || ||||||||| |||||||||||||||||||||    
T  74688 cttaattgcacttttccctcc-atcttttgctaattgtgcgattttgcacccc 74739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 15442765 - 15442817
Alignment:
Q  143 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||| ||||||||||||| ||| |||||||||| |||||||||||||    
T  15442765 cttaattgcatttttcccccctatatttcgccaattgtgtgattttgcacccc 15442817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 18020146 - 18020085
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||| |||||||||||||||||| |||  |||||||||  ||||||||||||||||||||||||    
T  18020146 atttaaggcttaattgcacttttaccc--tatcttttgttaattgtgcgattttgcaccccctc 18020085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 198
Target Start/End: Complemental strand, 23123567 - 23123514
Alignment:
Q  143 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||  |||| |||||||||| ||||||||||||||||||||||||    
T  23123567 cttaattgcacttt--ccccttatcttttgctaattgtgcgattttgcaccccctc 23123514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 20861693 - 20861638
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||| |||| ||||||||  | |||||||||||||||||||||||||    
T  20861693 aggcttaattgcattttttccccctatagtctgccaattgtgcgattttgcacccc 20861638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 22786837 - 22786892
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    ||||| |||||||||||||| ||||||||||||| | ||||||| |||||||||||    
T  22786837 ttaggtttaattgcactttttccccctatcttttactaattgtgtgattttgcacc 22786892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 22852009 - 22851958
Alignment:
Q  142 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    ||||||||| | |||||  |||||||||||||||||||||||||||||||||    
T  22852009 gcttaattgtatttttcatccctatcttttgccaattgtgcgattttgcacc 22851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 34498125 - 34498176
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||| ||||||||  |||| ||||||||||||||||||||||    
T  34498125 ttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacccc 34498176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 6198653 - 6198711
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    ||||||||||||||||||||||| ||| |||  | | ||||||||||||||||||||||    
T  6198653 ttttaggcttaattgcacttttctcccatatggtcttccaattgtgcgattttgcaccc 6198711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 9623502 - 9623556
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||| | | ||||  |||||||||||||||||||||||||||    
T  9623502 ggcttaattgcactttttctcactatagtttgccaattgtgcgattttgcacccc 9623556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 7127660 - 7127708
Alignment:
Q  148 ttgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 197  Q
    |||||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  7127660 ttgcacttttcccc-ctatcttttgctaattgtgcgattttgcatcccct 7127708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 17431286 - 17431339
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||| ||||    
T  17431286 aggcttaattgcacttttcccccatatagtttgtcaattgtgcgatttttcacc 17431339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 43162234 - 43162290
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||||| ||| |||||  ||||||||||||||||||| ||||    
T  43162234 ggcttaattgcacttttccccc-tatattttgttaattgtgcgattttgcacctcctc 43162290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 6092776 - 6092825
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    ||||||||||||| |||  |||||||||||||| ||||||||||||||||||    
T  6092776 aggcttaattgcatttt--ccccctatcttttgtcaattgtgcgattttgca 6092825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 198
Target Start/End: Complemental strand, 75016 - 74981
Alignment:
Q  163 ctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||| ||||||||||||||||||||||||    
T  75016 ctatcttttgctaattgtgcgattttgcaccccctc 74981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 9465700 - 9465751
Alignment:
Q  146 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccccc 196  Q
    |||||||||||| ||||||||| |||||| || |||||||||||||||||||    
T  9465700 aattgcacttttgccccctatctttttgctaactgtgcgattttgcaccccc 9465751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 33726696 - 33726743
Alignment:
Q  143 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 190  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||||    
T  33726696 cttaattgcactttttccccctatagtttaccaattgtgcgattttgc 33726743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 11007657 - 11007707
Alignment:
Q  144 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 193  Q
    |||||||||||||| | ||||||||||| ||||||||||||||||| ||||    
T  11007657 ttaattgcacttttgctccctatctttttgccaattgtgcgattttacacc 11007707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 194
Target Start/End: Complemental strand, 43598790 - 43598756
Alignment:
Q  160 cccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||||||||||||| ||||||||||||||||||||    
T  43598790 cccctatcttttgctaattgtgcgattttgcaccc 43598756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 74913 - 74864
Alignment:
Q  144 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcac 192  Q
    ||||||||||||||  |||||||||||| | |||||||||||||||||||    
T  74913 ttaattgcacttttgtcccctatctttttgtcaattgtgcgattttgcac 74864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 9465908 - 9465871
Alignment:
Q  161 ccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  9465908 ccctatcttttgttaattgtgcgattttgcaccccctc 9465871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 15156111 - 15156062
Alignment:
Q  146 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 194  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  15156111 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 15156062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 33748212 - 33748157
Alignment:
Q  146 aattgcacttttcccccctatctttt---gccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||| |||||||| ||||   || ||||||||||||||||||||||||    
T  33748212 aattgcacttttgccccctatttttttttgctaattgtgcgattttgcaccccctc 33748157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 39723415 - 39723452
Alignment:
Q  154 ttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    ||||| || |||||||||||||||||||||||||||||    
T  39723415 ttttcacctctatcttttgccaattgtgcgattttgca 39723452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 9465606 - 9465653
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgatttt 188  Q
    |||||||||||||||||| || ||||||||||| ||||||||| |||||    
T  9465606 aggcttaattgcactttt-cctcctatcttttgtcaattgtgcaatttt 9465653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 37752242 - 37752290
Alignment:
Q  146 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 193  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  37752242 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 37752290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 1e-24; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 25175213 - 25175148
Alignment:
Q  133 agattttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  25175213 agattttaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 25175148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 25116123 - 25116060
Alignment:
Q  133 agattttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 196  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  25116123 agattttaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccc 25116060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 25115755 - 25115813
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 197  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25115755 taggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccct 25115813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 25174847 - 25174905
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 197  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25174847 taggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccct 25174905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 18816946 - 18817006
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  18816946 attttaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 18817006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 12498562 - 12498621
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  12498562 ttttaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 12498621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 18433015 - 18433069
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18433015 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 18433069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 18433371 - 18433313
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  18433371 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 18433313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 18817665 - 18817611
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18817665 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 18817611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 12498985 - 12498928
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  12498985 ttaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 12498928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 26571221 - 26571164
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  26571221 ttaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 26571164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 191
Target Start/End: Complemental strand, 16466801 - 16466746
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  16466801 ttttaggcttaattgcacttttcccccctatattttgctaattgtgcgattttgca 16466746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 26020449 - 26020504
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  26020449 aggcttaattgcacttttcctccctatcttttgctaattgtgcgattttgcacccc 26020504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 22428930 - 22428987
Alignment:
Q  137 tttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  22428930 tttaggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 22428987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 11351483 - 11351427
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  11351483 taggtttaattgcacttttcactcctatcttttgccaattgtgcgattttgcacccc 11351427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 16726084 - 16726135
Alignment:
Q  147 attgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  16726084 attgcacttttgccccctatcttttgccaattgtgcgattttgcacctcctc 16726135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 19515018 - 19514963
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  19515018 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 19514963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 21207229 - 21207280
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 21207280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 33324894 - 33324835
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||  ||||||||||||| |||||||| ||||||||||||||||    
T  33324894 taggcttaattgcacttttttcccctatcttttgtcaattgtgtgattttgcaccccctc 33324835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 5187889 - 5187828
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 197  Q
    |||||||||||||||||||||| |||| |||||||||  |||||||| ||||||||||||||    
T  5187889 ttttaggcttaattgcacttttgccccttatcttttgttaattgtgcaattttgcaccccct 5187828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 22429252 - 22429196
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  22429252 ttaggcttaattgcatttttccccc-tatcttttgctaattgtgcgattttgcacccc 22429196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 26570726 - 26570783
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||| ||||||||||||||||  |||| ||||||||||||||||||||||    
T  26570726 ttaggcttaattacacttttcccccctatagtttgtcaattgtgcgattttgcacccc 26570783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 11350807 - 11350861
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||    
T  11350807 aggcttaattgcatttttcacccctatcttttgccaattgtgc-attttgcacccc 11350861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 3888239 - 3888293
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||| ||||||||||||  |||||||||||| ||||||||||||||    
T  3888239 ggcttaattgcacatttcccccctatagtttgccaattgtacgattttgcacccc 3888293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 31569905 - 31569958
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    |||| |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  31569905 taggtttaattgcacttttcccc-ctatcttttgtcaattgtgcgattttgcacc 31569958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 37780802 - 37780744
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    ||||| |||||||||| |||||||||||||||  ||||| |||||||||||||||||||    
T  37780802 atttttggcttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacc 37780744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 22729492 - 22729440
Alignment:
Q  142 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  22729492 gcttaattgcacttttccccc-tataatttgccaattgtgcgattttgcacccc 22729440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 34147565 - 34147512
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    |||||||||||||||||| ||||||||  |||| ||||||||||||||||||||    
T  34147565 aggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacc 34147512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 43464250 - 43464194
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    ||||||||||||||||||||||| |||||||  |||| ||||||||||||||||||||    
T  43464250 ttttaggcttaattgcacttttc-cccctatagtttgtcaattgtgcgattttgcacc 43464194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 41382890 - 41382945
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    ||||| ||||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  41382890 ttaggtttaattgca-ttttcccccctatcttttgttaattgtgcgattttgcaccc 41382945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 2817152 - 2817199
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||||    
T  2817152 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgca 2817199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 9869790 - 9869735
Alignment:
Q  144 ttaattgcacttttcccccctatcttttg-ccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||| |||||| ||||||  ||||||||||||||||||||||||||    
T  9869790 ttaattgcacttttgccccctgtctttttaccaattgtgcgattttgcaccccctc 9869735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 19514525 - 19514580
Alignment:
Q  141 ggcttaattgcacttttcccccc-tatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||| |||||| |||  |||||||||||||||||||||||||||    
T  19514525 ggcttaattgcactttcccccccctatagtttgccaattgtgcgattttgcacccc 19514580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 34576870 - 34576920
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  34576870 ttaattgcacttt-cccccctatcttttgctaattgtgcgattttacacccc 34576920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 37610201 - 37610255
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  37610201 aggcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcacccc 37610255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 37780319 - 37780373
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  37780319 aggcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcacccc 37780373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 41383221 - 41383167
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||| ||||||||||| ||| |||||| |||||||||||||||||||||    
T  41383221 aggcttaattgaacttttccccc-tattttttgctaattgtgcgattttgcacccc 41383167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 23011074 - 23011131
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||| |||||||||||| ||||||||  |||||||||| ||||||||||||||||||||    
T  23011074 tttttggcttaattgcatttttcccct-tatcttttgctaattgtgcgattttgcaccc 23011131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 34577217 - 34577164
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||| |||| |||||||||| ||||||| |||||||||||||    
T  34577217 ggcttaattgcactttttcccc-tatcttttgctaattgtgtgattttgcacccc 34577164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 9665560 - 9665609
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||  |||||||||| |||||||| ||||||||||||    
T  9665560 ttaattgcacttttcccc--tatcttttgctaattgtgcaattttgcacccc 9665609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 23011309 - 23011261
Alignment:
Q  144 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgca 191  Q
    ||||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  23011309 ttaattgcaattttgccccctatcttttagccaattgtgcgattttgca 23011261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 3888713 - 3888662
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||| | |||  |||||||||||| ||||||||||||||    
T  3888713 ttaattgcacttttccctcttataatttgccaattgtacgattttgcacccc 3888662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 9665885 - 9665828
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    ||||| ||||||||| |||||||||||| |||||||||| |||||||| |||||||||||    
T  9665885 atttttggcttaattccacttttccccc-tatcttttgctaattgtgc-attttgcaccc 9665828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 9869563 - 9869611
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||||||||||||||| ||||||  ||||| ||||||||||||||||||||    
T  9869563 ttaattgcacttttcctccctat--tttgctaattgtgcgattttgcaccc 9869611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 12441242 - 12441187
Alignment:
Q  144 ttaattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||| ||||||||| ||||| |||||||||||||||| || |||||    
T  12441242 ttaattgcacttttgccccctatctttttgtcaattgtgcgattttgtactccctc 12441187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 12441364 - 12441320
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattt 187  Q
    |||||||||||||||||||||  |||||||||| |||||||||||||    
T  12441364 ggcttaattgcacttttcccc--tatcttttgctaattgtgcgattt 12441320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 43463759 - 43463809
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||  |||  |||||||||||||||||||||||||||    
T  43463759 ttaattgcacttttcccct-tatagtttgccaattgtgcgattttgcacccc 43463809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 10098519 - 10098569
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    ||||||||||||||||| || |||||  |||| ||||||||||||||||||    
T  10098519 ggcttaattgcactttttcctcctatagtttgtcaattgtgcgattttgca 10098569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 194
Target Start/End: Original strand, 25940520 - 25940574
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    ||||||||||||| ||||  |||||||  |||| |||||||||||||||||||||    
T  25940520 aggcttaattgcatttttttcccctatagtttgtcaattgtgcgattttgcaccc 25940574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 37610677 - 37610620
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    ||||| |||||||||| ||||| |||||||||  ||||| |||||||||||||||||||    
T  37610677 atttttggcttaattgtacttt-cccccctatagtttgctaattgtgcgattttgcacc 37610620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 25115885 - 25115934
Alignment:
Q  146 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccc 194  Q
    |||||||||||| |||| |||| |||||| ||||||||||||||||||||    
T  25115885 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 25115934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 25174977 - 25175026
Alignment:
Q  146 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccc 194  Q
    |||||||||||| |||| |||| |||||| ||||||||||||||||||||    
T  25174977 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 25175026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 34576991 - 34577040
Alignment:
Q  144 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcac 192  Q
    |||||||||||||| |||| |||||||| || ||||||||||||||||||    
T  34576991 ttaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 34577040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 10098996 - 10098941
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| |||||||||||||||| || |||  |||| ||||||||||||||||||||||    
T  10098996 taggtttaattgcacttttcctcc-tatagtttgtcaattgtgcgattttgcacccc 10098941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 18433143 - 18433191
Alignment:
Q  146 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 193  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  18433143 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 18433191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 6e-24; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 56505691 - 56505747
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56505691 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 56505747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 50678777 - 50678833
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  50678777 taggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 50678833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 13198961 - 13198903
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  13198961 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 13198903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 16555507 - 16555572
Alignment:
Q  133 agattttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||| ||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  16555507 agatgttaggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctc 16555572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 28196343 - 28196400
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  28196343 ttaggcttaattgcacttttcccccctataatttgccaattgtgcgattttgcacccc 28196400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 49178866 - 49178813
Alignment:
Q  145 taattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  49178866 taattgcacttttctcccctatcttttgccaattgtgcgattttgcaccccctc 49178813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 3930535 - 3930477
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  3930535 taggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcaccccctc 3930477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 9023239 - 9023298
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||    
T  9023239 ttttaggcttaattgcacttttctcccctatagtttgccaattgtgcgattttgcacccc 9023298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 24775838 - 24775783
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  24775838 aggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttgcacccc 24775783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 28196828 - 28196773
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  28196828 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 28196773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 32703709 - 32703650
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  32703709 tttttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 32703650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 36095816 - 36095871
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  36095816 aggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 36095871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 36096526 - 36096475
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36096526 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 36096475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 39744524 - 39744465
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  39744524 ttttaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 39744465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 16555871 - 16555817
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  16555871 ggcttaattgcacttttcccccttatcttttgctaattgtgcgattttgcacccc 16555817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 18077257 - 18077199
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  18077257 aggcttaattgcacttttcacccctattttttgctaattgtgcgattttgcaccccctc 18077199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 50679478 - 50679424
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  50679478 ggcttaattgcacttttcacccctatcttttgccaattgtacgattttgcacccc 50679424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 8181992 - 8182049
Alignment:
Q  142 gcttaattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  8181992 gcttaattgcacttttgccccctatcgttttgccaattgtgcgattttgcaccccctc 8182049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 9380797 - 9380744
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 192  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  9380797 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcac 9380744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 25161879 - 25161932
Alignment:
Q  142 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  25161879 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 25161932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 22681576 - 22681631
Alignment:
Q  142 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  22681576 gcttaattgcacttt-cccccctatcttttgtcaattgtgcgattttgcaccccctc 22681631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 45830256 - 45830196
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  45830256 attttaggcttaatcgcacttttcacccctatcttttgtcaattgtgcgattttacacccc 45830196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 9023735 - 9023680
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  9023735 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 9023680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 26207801 - 26207746
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||||||||||||    
T  26207801 aggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcacccc 26207746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 32703224 - 32703279
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  32703224 aggcttaattgcacttttcccccctataatttgccaattgtgcgattatgcacccc 32703279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 43051307 - 43051252
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||    
T  43051307 aggcttaattgcatttttcacccctatcttttgccaattgtgtgattttgcacccc 43051252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 4239420 - 4239366
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  4239420 ggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 4239366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 9380307 - 9380361
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  9380307 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcccccc 9380361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 13198606 - 13198660
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  13198606 ttaattgcacttttctcctttatcttttgccaattgtgcgattttgcaccccctc 13198660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 292779 - 292832
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    |||||||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  292779 ttaggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgca 292832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 11241717 - 11241661
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  11241717 ttaggcttaattgtacttttccccc-tatcttttgccaattgtgggattttgcacccc 11241661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 11529169 - 11529222
Alignment:
Q  142 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  11529169 gcttaattgcacttttcctccctaacttttgccaattgtgtgattttgcacccc 11529222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 169012 - 169068
Alignment:
Q  140 aggcttaattgcacttttc-ccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  169012 aggcttaattgcacttttctccccctatagtttgccaattgtgcgattttgcacccc 169068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 293272 - 293217
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||| ||||||||  |||| ||||||||||||||||||||||    
T  293272 aggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacccc 293217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 26207360 - 26207414
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  26207360 aggcttaattgcacttt-cccccctatagtttgccaattgtgcgattttgcacccc 26207414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 43050610 - 43050661
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  43050610 ttaattgcacttttcatccctatcttttaccaattgtgcgattttgcacccc 43050661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 169493 - 169439
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||| |||||||||||||  |||| ||||||||||||||||||||||    
T  169493 ggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacccc 169439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 5205984 - 5206042
Alignment:
Q  137 tttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||| ||||||||||||  ||||  |||||||||||||||    
T  5205984 tttaggcttaattgcacttttcctccctatcttttgttaatttggcgattttgcacccc 5206042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 22681935 - 22681881
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    |||||||||||||||||||||| |||||||||||  |||||||| ||||||||||    
T  22681935 taggcttaattgcacttttccctcctatcttttgttaattgtgcaattttgcacc 22681881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 25225453 - 25225399
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||||||||||||||| |  | |||||||||||||||||||||||||||||||||    
T  25225453 aggcttaattgcacttctgtctcctatcttttgccaattgtgcgattttgcaccc 25225399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 35393830 - 35393773
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||| |||||||||||||    
T  35393830 aggcttaattgcacttttcaccc-tatcttttgctaattgtgcgaatttgcaccccctc 35393773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 47219261 - 47219203
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    |||||||| ||||||||| ||||| || ||||||||||| |||||||||||||||||||    
T  47219261 attttaggtttaattgcatttttcacctctatcttttgctaattgtgcgattttgcacc 47219203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 49178644 - 49178694
Alignment:
Q  146 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacccc 195  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  49178644 aattgcacttttgccccctatctttttgccaattgtgcgattttgcacccc 49178694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 194
Target Start/End: Original strand, 54508814 - 54508868
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||||||||||||||||| || || ||||||||||||||||| ||||||||||||    
T  54508814 aggcttaattgcactttttcctccaatcttttgccaattgtgtgattttgcaccc 54508868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 189
Target Start/End: Complemental strand, 56506630 - 56506580
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 189  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  56506630 taggcttaattgcacttttcacccttatcttttgccaattgtgcaattttg 56506580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 8182228 - 8182171
Alignment:
Q  140 aggcttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccc 196  Q
    ||||||||||||||||||| ||||||| |||| || ||||||||||||||||||||||    
T  8182228 aggcttaattgcacttttcacccctatttttttgctaattgtgcgattttgcaccccc 8182171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 11241389 - 11241446
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||| || |||||||||  ||||||||||||||||| ||||||    
T  11241389 ggcttaattgcacttttcctccttatcttttgttaattgtgcgattttgcatcccctc 11241446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 23539839 - 23539893
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||  ||||||||  |||||||||||||||||||||||||||    
T  23539839 taggcttaattgcacttt--ccccctatagtttgccaattgtgcgattttgcacccc 23539893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 23540306 - 23540253
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||||||||||||||||| |||||||  |||| |||||||||||||||||||||    
T  23540306 ggcttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccc 23540253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 27304943 - 27304890
Alignment:
Q  146 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  27304943 aattgcactttttccccctatctttttgctaattgtgcgattttgcaccccctc 27304890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 39744027 - 39744084
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||| ||||||||  ||| |||||||||||||||| ||||||    
T  39744027 ttaggcttaattgcactttttccccctatagtttaccaattgtgcgattttccacccc 39744084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 39086677 - 39086625
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    |||||||||||||||||| ||| |||  |||||||||||||||||||||||||    
T  39086677 ggcttaattgcacttttctcccatatagtttgccaattgtgcgattttgcacc 39086625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 27304718 - 27304773
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||| |||||||||  |||||| ||| ||||||||||||||||||||||||    
T  27304718 ggcttaattgcccttttcccc--tatcttctgctaattgtgcgattttgcaccccctc 27304773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 43292411 - 43292361
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    |||||||||||| ||||||||||| |  |||||||||||||||||||||||    
T  43292411 ggcttaattgcatttttcccccctttagtttgccaattgtgcgattttgca 43292361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 194
Target Start/End: Original strand, 45828993 - 45829047
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    ||||||||||| ||||||| | |||||||||| ||||||||||||||||| ||||    
T  45828993 aggcttaattgtacttttcactcctatcttttaccaattgtgcgattttgtaccc 45829047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 5206283 - 5206231
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||||||||||||||||||||| ||||||||   ||||||||||||||||||||    
T  5206283 ggcttaattgcacttttcccccttatctttt-ttaattgtgcgattttgcaccc 5206231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 43292038 - 43292091
Alignment:
Q  142 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||  |||||||  |||| ||||||||||||||||||||||    
T  43292038 gcttaattgcacttttttcccctatagtttgtcaattgtgcgattttgcacccc 43292091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 8488534 - 8488479
Alignment:
Q  142 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||| ||  |||||||| | ||||||||||||||||||||||||    
T  8488534 gcttaattgcacttttcgcct-tatctttttctaattgtgcgattttgcaccccctc 8488479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 16555743 - 16555695
Alignment:
Q  146 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 193  Q
    ||||||||||||||||| |||||||| || |||||||||||||||||||    
T  16555743 aattgcacttttcccccttatctttttgctaattgtgcgattttgcacc 16555695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 7603472 - 7603422
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 192  Q
    ||||||||||||||||| |||| ||||||||  |||||||||||||||||||    
T  7603472 ggcttaattgcactttttcccc-tatctttttacaattgtgcgattttgcac 7603422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 39415579 - 39415528
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    |||||||| ||||||||| ||| ||||||||||| |||||||| ||||||||    
T  39415579 aggcttaactgcactttttccctctatcttttgctaattgtgcaattttgca 39415528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 48405961 - 48406015
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||| ||||||||  |||||||||| ||| ||||||||||||    
T  48405961 aggcttaattgcactttt-ccccctatagtttgccaattatgcaattttgcacccc 48406015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 48406425 - 48406386
Alignment:
Q  155 tttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  48406425 tttcccccctataatttgccaattgtgcgattttgcaccc 48406386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 3930179 - 3930235
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||| |||| ||||||||   |||| |||||||||||||||||||    
T  3930179 ggcttaattgcactttttcccc-tatcttttattaattatgcgattttgcaccccctc 3930235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 5206185 - 5206132
Alignment:
Q  146 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 198  Q
    |||||||||| | ||||||||||||| || |||||||||||||||||| |||||    
T  5206185 aattgcacttcttccccctatctttttgctaattgtgcgattttgcactccctc 5206132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 7603146 - 7603200
Alignment:
Q  142 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||||  ||||||||   |||||||| |||||||||||||||    
T  7603146 gcttaattgcacttttcccc--tatctttttttaattgtgcaattttgcaccccctc 7603200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 23432474 - 23432531
Alignment:
Q  139 taggcttaattgcacttttccccccta-tcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||| ||||||| | ||||| ||||||||| ||| ||||||||    
T  23432474 taggcttaattgcacttttgccccctatttttttgtcaattgtgcaattctgcacccc 23432531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 194
Target Start/End: Original strand, 39415244 - 39415277
Alignment:
Q  161 ccctatcttttgccaattgtgcgattttgcaccc 194  Q
    ||||||||||||| ||||||||||||||||||||    
T  39415244 ccctatcttttgctaattgtgcgattttgcaccc 39415277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 49178533 - 49178574
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgc 182  Q
    |||||||||||||||||| ||| |||||||||| ||||||||    
T  49178533 ggcttaattgcacttttctcccatatcttttgctaattgtgc 49178574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 54509156 - 54509116
Alignment:
Q  154 ttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||| |||||||| |||||| ||||||||||||||||||||    
T  54509156 tttttccccctattttttgctaattgtgcgattttgcaccc 54509116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 3404045 - 3403986
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3404045 taggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 3403986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 33828984 - 33829044
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33828984 atttttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 33829044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 33829692 - 33829636
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33829692 taggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 33829636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 3403717 - 3403771
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3403717 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 3403771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 18241853 - 18241911
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  18241853 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 18241911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 11656836 - 11656779
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||    
T  11656836 ggcttaattgcacttttctctcctatcttttgctaattgtgcgattttgcaccccctc 11656779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 10039674 - 10039729
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  10039674 taggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc 10039729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 30388420 - 30388360
Alignment:
Q  137 tttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 197  Q
    |||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||||||||    
T  30388420 tttaggtttaattgtactttttccccctatcttttgctaattgtgcgattttgcaccccct 30388360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 7654603 - 7654548
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  7654603 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 7654548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 13579710 - 13579648
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||    
T  13579710 attttaggcttaattgcacttttctccc-tatcgtttgctaattgtgcgattttgcaccccctc 13579648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 21032336 - 21032285
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 190  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  21032336 taggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgc 21032285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 33974362 - 33974299
Alignment:
Q  132 aagattttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||  |||||||||||| |||||||||||||  |||||||||||||||||||||||||||    
T  33974362 aagatttatggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcacccc 33974299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 10087912 - 10087858
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||||||||||    
T  10087912 ggcttaattgcacttttcccccctttagtttgccaattgtgcgattttgcacccc 10087858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 18242215 - 18242153
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||| |||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||    
T  18242215 tttttggcttaattgcattttttttccctatcttttgccaattgtgcgattttgcaccccctc 18242153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 21031978 - 21032035
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  21031978 aggcttaattgcacttttccccc-taacttttgctaattgtgcgattttgcaccccctc 21032035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 3825530 - 3825583
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  3825530 ttaattgcacttttccccc-tatattttgctaattgtgcgattttgcaccccctc 3825583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 30388062 - 30388111
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  30388062 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgca 30388111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 2762611 - 2762664
Alignment:
Q  146 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  2762611 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccccctc 2762664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 10039893 - 10039840
Alignment:
Q  146 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  10039893 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccccctc 10039840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 12714436 - 12714488
Alignment:
Q  146 aattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||| ||||||    
T  12714436 aattgcacttttgccccctatcttttgttaattgtgcgattttgcagcccctc 12714488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 21032107 - 21032158
Alignment:
Q  148 ttgcacttttcccccctatctt-ttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  21032107 ttgcacttttgccccctatcttcttgtcaattgtgcgattttgcaccccctc 21032158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 29074426 - 29074372
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||| |||| |||||||||  |||||||||||||||||||||||||||    
T  29074426 aggcttaattgctcttt-cccccctatagtttgccaattgtgcgattttgcacccc 29074372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 29079190 - 29079136
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||| |||| |||||||||  |||||||||||||||||||||||||||    
T  29079190 aggcttaattgctcttt-cccccctatagtttgccaattgtgcgattttgcacccc 29079136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 29106999 - 29106945
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||| |||| |||||||||  |||||||||||||||||||||||||||    
T  29106999 aggcttaattgctcttt-cccccctatagtttgccaattgtgcgattttgcacccc 29106945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 32734047 - 32734000
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||||    
T  32734047 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgca 32734000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 23250591 - 23250648
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||| |||| ||||||||| |||||||| ||| ||||||||||||    
T  23250591 aggcttaattgcactttttcccc-tatcttttgtcaattgtgagatcttgcaccccctc 23250648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 11656608 - 11656660
Alignment:
Q  146 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccccct 197  Q
    |||||||||||| ||||||||| |||||  |||||||||||||||||||||||    
T  11656608 aattgcacttttgccccctatcgttttgataattgtgcgattttgcaccccct 11656660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 33655169 - 33655114
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 196  Q
    |||||||||||||||| |||||  |||||||||| |||||||| |||||||||||||    
T  33655169 aggcttaattgcacttgtcccct-tatcttttgctaattgtgcaattttgcaccccc 33655114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 2354865 - 2354810
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||| |||||||  ||||  |||| ||||||||||||||||||||||    
T  2354865 aggcttaattgcatttttcccgtctatagtttgtcaattgtgcgattttgcacccc 2354810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 22684416 - 22684358
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| |||||||||||||||||||||  |||  ||||||||||||| |||||||||||||    
T  22684416 tttttggcttaattgcacttttcccct-tatagtttgccaattgtgtgattttgcacccc 22684358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 22754652 - 22754710
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| |||||||||||||||||||||  |||  ||||||||||||| |||||||||||||    
T  22754652 tttttggcttaattgcacttttcccct-tatagtttgccaattgtgtgattttgcacccc 22754710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 31598778 - 31598732
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||    
T  31598778 ttaattgcacttttccccc-tatcttttgttaattgtgcgattttgca 31598732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 31598327 - 31598274
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    ||||||||||| | ||||||| | |||||||||| ||||||||||||||||||||    
T  31598327 aggcttaattgtatttttccctc-tatcttttgctaattgtgcgattttgcaccc 31598274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 33971994 - 33972050
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||| |||| |||| |||||||||  |||||| |||||||||||||||||    
T  33971994 ggcttaattgcagtttttcccc-tatcttttgttaattgtacgattttgcaccccctc 33972050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 2762500 - 2762540
Alignment:
Q  158 cccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||| || |||||| ||||||||||||||||||||||||    
T  2762500 ccccccaattttttgctaattgtgcgattttgcaccccctc 2762540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 3403915 - 3403867
Alignment:
Q  146 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 193  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  3403915 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 3403867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 30388290 - 30388242
Alignment:
Q  146 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 193  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  30388290 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 30388242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 31598201 - 31598157
Alignment:
Q  145 taattgcacttttcccccctatc-ttttgccaattgtgcgatttt 188  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||    
T  31598201 taattgcacttttgccccctatctttttgtcaattgtgcgatttt 31598157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 31598685 - 31598641
Alignment:
Q  145 taattgcacttttcccccctatc-ttttgccaattgtgcgatttt 188  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||    
T  31598685 taattgcacttttgccccctatctttttgtcaattgtgcgatttt 31598641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 55; Significance: 9e-23; HSPs: 3)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 6393 - 6451
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6393 aggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 6451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 6750 - 6694
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  6750 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcaccccctc 6694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 6623 - 6575
Alignment:
Q  146 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 193  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  6623 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 6575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 25424 - 25366
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25424 aggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 25366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 25295 - 25247
Alignment:
Q  146 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 193  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  25295 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 25247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 9e-23; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 20969073 - 20969019
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20969073 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 20969019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 10293968 - 10293906
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  10293968 tttttggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 10293906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 48159895 - 48159951
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  48159895 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 48159951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 1927767 - 1927825
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  1927767 tttttggcttaattgcacctttcccccctatcttttgccaattatgcgattttgcaccc 1927825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 18875250 - 18875188
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||| ||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||    
T  18875250 ttttgggcttaattgcacttttgccccctatcttttgctaattgtacgattttgcaccccctc 18875188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 20968717 - 20968775
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  20968717 aggcttaattgcacctttcccccctatcttttgttaattgtgcgattttgcaccccctc 20968775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 40849017 - 40848961
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  40849017 taggcttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 40848961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 47871176 - 47871121
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 196  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  47871176 aggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcaccccc 47871121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 18874880 - 18874935
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  18874880 taggctcaattgcactttttccccctatcttttgctaattgtgcgattttgcaccc 18874935  T

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Target: chr3; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 27238459 - 27238518
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||||||    
T  27238459 attttaggcttaattgtacttttccctcctatagtttgccaattgtgcgattttgcaccc 27238518  T

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Target: chr3; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 45060927 - 45060872
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||| |||||    
T  45060927 taggcttaattgcacttttcacccctatcttttgctaattgtgcgattttacaccc 45060872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 48160392 - 48160333
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| |||||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  48160392 tttttggcttaattgcactttccccccctatagtttgccaattgtgcgattttgcacccc 48160333  T

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Target: chr3; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 53687887 - 53687942
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  53687887 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 53687942  T

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Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 47666389 - 47666335
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  47666389 ggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcacccc 47666335  T

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Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 1928490 - 1928434
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  1928490 ttaggtttaattgca-ttttcctccctatcttttgccaattgtgcgattttgcacccc 1928434  T

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Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 8314013 - 8314066
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||||||||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  8314013 ggcttaattgcacttttctcccctatattttgtcaattgtgcgattttgcaccc 8314066  T

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Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 10293608 - 10293665
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||| ||||  ||||||||||||| |||||||||||||||||||||||||    
T  10293608 ggcttaattgcatttttttcccctatcttttgtcaattgtgcgattttgcaccccctc 10293665  T

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Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 27238965 - 27238900
Alignment:
Q  130 ataagattttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| ||||| || |||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  27238965 ataaaatttttggtttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 27238900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 8315138 - 8315083
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||    
T  8315138 ttaggcttaattgcacttt-cccccctatattttgtcaattgtgcgattttgcaccc 8315083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 17372298 - 17372354
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 197  Q
    ||||||||||||| ||| |||||||| |||||| |||||||||||||||||||||||    
T  17372298 ggcttaattgcaccttttccccctattttttgctaattgtgcgattttgcaccccct 17372354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 21895652 - 21895712
Alignment:
Q  136 ttttaggcttaattgcacttttccccc-ctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||| |||| |||| |||||||||||||| |||||||||||||    
T  21895652 ttttaggcttaattgcactttttccccactatgttttgccaattgtgtgattttgcacccc 21895712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 22429159 - 22429211
Alignment:
Q  142 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    ||||||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  22429159 gcttaattgcacttttctcccctatattttgccaattgtgcgactttgcaccc 22429211  T

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Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 42455787 - 42455839
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 190  Q
    |||||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  42455787 ttaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 42455839  T

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Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 42672978 - 42673031
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  42672978 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcacccc 42673031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 53766634 - 53766580
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||||||||||||||||||||||||||  ||||| |||||||| |||||||||||    
T  53766634 aggcttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcaccc 53766580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 26007679 - 26007622
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 192  Q
    |||||||| |||||||||||||| ||||||||  |||||||||||| |||||||||||    
T  26007679 attttaggtttaattgcactttttccccctatagtttgccaattgtacgattttgcac 26007622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 47665906 - 47665963
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    |||||||||||||||||||||| |||| |||  |||| ||||||||||||||||||||    
T  47665906 ttttaggcttaattgcactttttccccttatagtttgtcaattgtgcgattttgcacc 47665963  T

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Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 1100912 - 1100968
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||| ||||||||||||| ||| ||||||||||||| |||||||||||||| |||||    
T  1100912 ttagacttaattgcacttatccaccctatcttttgcaaattgtgcgatttttcaccc 1100968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 13657673 - 13657621
Alignment:
Q  144 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  13657673 ttaattgcacttttgtcccctatctttttgccaattgtgcgattttgcacccc 13657621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 14015923 - 14015867
Alignment:
Q  144 ttaattgcactttt-cccccctatctttt-gccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||    
T  14015923 ttaattgcacttttgcccccctatctttttgccaattgtgcgattttgcactccctc 14015867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 14016023 - 14015964
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||| |||||||||||||||  || |||||||||| |||||||||||||||||||||    
T  14016023 attttaggtttaattgcacttttcatcc-tatcttttgctaattgtgcgattttgcacccc 14015964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 42673355 - 42673296
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||| |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  42673355 atttttggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 42673296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 45060596 - 45060644
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 189  Q
    ||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  45060596 ggcttaattgcacttttccccactatcttttgctaattatgcgattttg 45060644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 1101237 - 1101182
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||||||||||||||||||||||| ||||||||||   |||||||||||| |||||    
T  1101237 taggcttaattgcacttttcccccttatcttttgctttttgtgcgatttttcaccc 1101182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 10348858 - 10348799
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| ||||||||||||||||| || | |||  |||||||||||||||||||||||||||    
T  10348858 tttttggcttaattgcactttttcctcatatagtttgccaattgtgcgattttgcacccc 10348799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 17372525 - 17372470
Alignment:
Q  144 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 198  Q
    ||||| |||||||| | ||||||||||| |||||||||||||||||||||||||||    
T  17372525 ttaatggcacttttgcaccctatctttttgccaattgtgcgattttgcaccccctc 17372470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 24485518 - 24485460
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||| |||||||||||||||||| ||| |||  |||||||||||||||||||||||||||    
T  24485518 tttttggcttaattgcacttttctccc-tatagtttgccaattgtgcgattttgcacccc 24485460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 26007181 - 26007235
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||| |||||||||||||  |||| ||||||||||||||||||||||    
T  26007181 aggcttaattgca-ttttcccccctatagtttgtcaattgtgcgattttgcacccc 26007235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 40848520 - 40848574
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||| ||||||    
T  40848520 aggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttacacccc 40848574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 3353128 - 3353181
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  3353128 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 3353181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 3644837 - 3644783
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||| ||||||||| ||| |||||  |||||||||||||||||||||    
T  3644837 ggcttaattgcatttttcccccttattttttgttaattgtgcgattttgcacccc 3644783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 4947263 - 4947312
Alignment:
Q  145 taattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||||||||||||| ||||||| |||||  ||||||||||||||||||||    
T  4947263 taattgcacttttcacccctattttttgttaattgtgcgattttgcaccc 4947312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 4947386 - 4947439
Alignment:
Q  146 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||| |||||    
T  4947386 aattgcacttttgccctctatctttttgccaattgtgcgattttgcactccctc 4947439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 17372652 - 17372594
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||| ||||||||||||||||||||  ||| |||| | |||||||||||||||||||||    
T  17372652 attttaagcttaattgcacttttcccc--tatattttactaattgtgcgattttgcacccc 17372594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 36181047 - 36180990
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||| ||||||  ||||  ||||||||||||||| |||||    
T  36181047 ttaggcttaattgcacttttcctccctatagtttgttaattgtgcgattttgtacccc 36180990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 17441118 - 17441066
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 192  Q
    ||||||||||||| |||||| | ||||||||||  ||||||||||||||||||    
T  17441118 aggcttaattgcatttttcctctctatcttttgttaattgtgcgattttgcac 17441066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 18875017 - 18875065
Alignment:
Q  146 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcacc 193  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||||    
T  18875017 aattgcacttttgccccctatctttttgctaattgtgcgattttgcacc 18875065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 53688361 - 53688306
Alignment:
Q  136 ttttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 192  Q
    |||| |||||||||||||||| | |||||||  ||||||||||||||||||||||||    
T  53688361 tttttggcttaattgcacttt-ctcccctatagtttgccaattgtgcgattttgcac 53688306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 1101141 - 1101087
Alignment:
Q  144 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||| |||| |||||||| | |||||||||||||||||||||||||    
T  1101141 ttaattgcacttttgcccc-tatctttttgtcaattgtgcgattttgcaccccctc 1101087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 9026860 - 9026907
Alignment:
Q  146 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcac 192  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  9026860 aattgcacttttgccccctatctttttgctaattgtgcgattttgcac 9026907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 13657445 - 13657500
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 196  Q
    ||||||||| |||||||| |||   | |||||||||||||||||||||||||||||    
T  13657445 ggcttaattacacttttctccctatttttttgccaattgtgcgattttgcaccccc 13657500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 23630086 - 23630035
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||| || ||||| |||||  |||||||||||||||||||||    
T  23630086 ttaattgcactttttcctcctattttttggtaattgtgcgattttgcacccc 23630035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 53766166 - 53766217
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||| || |||||  |||| ||||||||||||||||||||||    
T  53766166 ttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcacccc 53766217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 3353606 - 3353553
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    |||| ||| ||||||||||||||| |||  |||||||||||||||||||||||||    
T  3353606 taggtttagttgcacttttccccc-tatagtttgccaattgtgcgattttgcacc 3353553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 9027086 - 9027033
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||| |||||||||||| |||||||||| |||||||| ||||| ||||||    
T  9027086 ggcttaatttcacttttccccc-tatcttttgctaattgtgcaattttacacccc 9027033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 21896564 - 21896511
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||| |||| |||| ||| ||||| ||||||||||||||||||||||    
T  21896564 ggcttaattgcattttttcccc-tatattttgtcaattgtgcgattttgcacccc 21896511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 26540694 - 26540747
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||| |||| ||| ||||| ||||||||| |||||||||||||||    
T  26540694 ttaattgcacttttgcccc-tattttttgtcaattgtgcaattttgcaccccctc 26540747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 42627599 - 42627550
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    |||||||||||||||||||| | |||||||||| ||||||| |||||||||    
T  42627599 ggcttaattgcacttttccctc-tatcttttgctaattgtgtgattttgca 42627550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 10771498 - 10771550
Alignment:
Q  135 attttaggcttaattgcacttttcccccctatcttttgccaattgtgcgatttt 188  Q
    |||||||||||||||||| ||||  ||| ||||||||| |||||||||||||||    
T  10771498 attttaggcttaattgcatttttttccc-tatcttttgtcaattgtgcgatttt 10771550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 14015690 - 14015751
Alignment:
Q  137 tttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||| ||||||||||||||  ||  ||||||||| |||| ||||||||||||||| ||||    
T  14015690 tttaggtttaattgcacttttttcctttatcttttgtcaatcgtgcgattttgcacctcctc 14015751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 20968946 - 20968897
Alignment:
Q  146 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccc 194  Q
    |||||||||||| |||| |||| |||||| ||||||||||||||||||||    
T  20968946 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 20968897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 47870821 - 47870877
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcg-attttgcacccc 195  Q
    |||||||||||||||||||  |||||||||||||| |||| |||| ||||||||||||    
T  47870821 taggcttaattgcactttt-tcccctatcttttgctaattatgcgaattttgcacccc 47870877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 3644772 - 3644720
Alignment:
Q  144 ttaattgcacttttcccccctatctt-ttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||| ||| ||||| | |||| |||||||||||||||||||||    
T  3644772 ttaattgcacttttgccctctatcctcttgctaattgtgcgattttgcacccc 3644720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 22429647 - 22429596
Alignment:
Q  143 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||| ||| |||||  |||| ||||||||||||||||||||||    
T  22429647 cttaattgcacttt-ccctcctatagtttgtcaattgtgcgattttgcacccc 22429596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 1474 - 1417
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1474 ggcttaattgcactttttccccctatcttttgccaattgtgcgattttgcaccccctc 1417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 1118 - 1175
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  1118 ggcttaattgcactttttccccctatcttttgttaattgtgcgattttgcaccccctc 1175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 1346 - 1297
Alignment:
Q  146 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 194  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  1346 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 1297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 54; Significance: 4e-22; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 438930 - 438987
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  438930 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 438987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 439255 - 439196
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||||||    
T  439255 taggcttaattgcactttttccccttatcttttgctaattgtgcgattttgcatcccctc 439196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 183717 - 183660
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||    
T  183717 aggcttaattgcacttttcccccctatattttgctaattgtgcga-tttgcaccccctc 183660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 183367 - 183416
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  183367 ttaattgcacttttcccc-ctatcttttgtcaattgtacgattttgcaccc 183416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 183592 - 183544
Alignment:
Q  144 ttaattgcacttttcccccctatc-ttttgccaattgtgcgattttgca 191  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||||||    
T  183592 ttaattgcacttttgccccctatctttttaccaattgtgcgattttgca 183544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 45863 - 45804
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45863 ttaggcttaattgcacttttccccc-tatcttttgccaattgtgcgattttgcaccccctc 45804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 45536 - 45593
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||||    
T  45536 aggcttaattgcacttttcccc-ctatcttttgttaattgtgcgattttgcactccctc 45593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 6849 - 6795
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  6849 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 6795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 6152 - 6206
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||| ||||||    
T  6152 ggcttaattgcacttttcacctctatcttttgctaattgtgcgattttacacccc 6206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 10011 - 10062
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  10011 aggcttaattgcacttttgccccctatcttttgccaattgtacgattttgca 10062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 38750 - 38695
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  38750 aggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 38695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 185328 - 185274
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||||| ||||||  |||||||||||||||||||||||||||    
T  185328 ggcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacccc 185274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 411923 - 411979
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||    
T  411923 ggcttaattgcactttacccc-ctatcttttgtcaattgtgcgattttgcaccccctc 411979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 9904 - 9960
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 196  Q
    |||||||||||||||||| ||||||||  |||||||||||||||||||| |||||||    
T  9904 aggcttaattgcactttttccccctatagtttgccaattgtgcgatttttcaccccc 9960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 10374 - 10320
Alignment:
Q  138 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    ||||||||||| ||||||||||||  |||  |||||||||||| |||||||||||||    
T  10374 ttaggcttaatagcacttttcccc--tatagtttgccaattgtccgattttgcaccc 10320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 329 - 380
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 191  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  329 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgca 380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 816 - 763
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||| |||| |||  |||||||||||||||||||||||||||    
T  816 ggcttaattgcactttttcccc-tatagtttgccaattgtgcgattttgcacccc 763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 50560 - 50506
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 196  Q
    |||||||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  50560 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcaccccc 50506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 50074 - 50127
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||  ||||||||  |||| ||||||||| ||||||||||||    
T  50074 aggcttaattgcacttt--ccccctatagtttgtcaattgtgcaattttgcacccc 50127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 205686 - 205743
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||||||    
T  205686 aggcttaattgcatttttctccc-tatcttttgctaattgtgcgattttgcaccccctc 205743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 7653 - 7597
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||| ||||||||    
T  7653 ggcttaattgcactttttcccc-tatcttttgctaattgtgcgattttgtaccccctc 7597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 7454 - 7508
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||| |||| |||||||||| |||| ||||||||||||||||    
T  7454 aggcttaattgcactttttcccc-tatcttttgctaattatgcgattttgcacccc 7508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 17209 - 17153
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||||| ||||    
T  17209 ggcttaattgcacttttccccc-tatcttttgctaattgtgcaattttgcaccgcctc 17153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 198
Target Start/End: Original strand, 16870 - 16908
Alignment:
Q  160 cccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  16870 cccctatcttttgctaattgtgcgattatgcaccccctc 16908  T

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Target: scaffold0598 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 6927 - 6877
Alignment:
Q  142 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 194  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  6927 gcttaattgcacttt-cccccctatcttttgccaattgtgc-attttgcaccc 6877  T

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Target: scaffold0598; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 6609 - 6659
Alignment:
Q  143 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 193  Q
    |||||||||||| |||||||||||||||||  ||||||| |||||||||||    
T  6609 cttaattgcactgttcccccctatcttttgttaattgtgtgattttgcacc 6659  T

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Target: scaffold0176 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 20099 - 20043
Alignment:
Q  139 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    |||||||||||||||||||||||| |||  |||| ||||||||||||||||| ||||    
T  20099 taggcttaattgcacttttcccccttatagtttgtcaattgtgcgattttgcccccc 20043  T

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Target: scaffold0176; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 19620 - 19674
Alignment:
Q  140 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||| ||||||||  |||  |||||||||||||||||||||||||||    
T  19620 aggcttaattgcaattttcccca-tatagtttgccaattgtgcgattttgcacccc 19674  T

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Target: scaffold1221 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 1511 - 1564
Alignment:
Q  141 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 195  Q
    ||||||||||||||||| || | |||||||||||||||||| |||||||||||||    
T  1511 ggcttaattgcactttttcctc-tatcttttgccaattgtgtgattttgcacccc 1564  T

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Target: scaffold1221; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 1834 - 1781
Alignment:
Q  144 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||||||||||| |||||||||   |||||||||||||||||| ||||    
T  1834 ttaattgcacttttccccc-tatcttttgtttattgtgcgattttgcacctcctc 1781  T

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Target: scaffold0035 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 72967 - 73023
Alignment:
Q  142 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 198  Q
    ||||||||||| ||||||||  |||||||||| |||||||| |||||||||| ||||    
T  72967 gcttaattgcatttttcccctttatcttttgctaattgtgcaattttgcaccgcctc 73023  T

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Target: scaffold0035; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 73089 - 73143
Alignment:
Q  144 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccct 197  Q
    ||||||||||||||  |||||||||||| | ||| ||||||||||||||||||||    
T  73089 ttaattgcacttttgtcccctatctttttgtcaactgtgcgattttgcaccccct 73143  T

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