View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21549_high_2 (Length: 482)

Name: NF21549_high_2
Description: NF21549
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21549_high_2
NF21549_high_2
[»] chr8 (17 HSPs)
chr8 (15-464)||(2516741-2517190)
chr8 (28-90)||(10170375-10170437)
chr8 (135-184)||(2515727-2515776)
chr8 (47-98)||(34259803-34259854)
chr8 (161-267)||(2506022-2506128)
chr8 (57-99)||(3066041-3066083)
chr8 (254-310)||(2512635-2512692)
chr8 (59-92)||(25799154-25799187)
chr8 (57-97)||(1979413-1979453)
chr8 (59-93)||(16824392-16824426)
chr8 (61-95)||(31551857-31551891)
chr8 (47-89)||(43534933-43534975)
chr8 (59-92)||(25488801-25488834)
chr8 (47-99)||(6501494-6501546)
chr8 (47-99)||(14496033-14496084)
chr8 (57-93)||(28144067-28144103)
chr8 (57-93)||(29096951-29096987)
[»] chr6 (10 HSPs)
chr6 (57-98)||(34625734-34625775)
chr6 (57-99)||(34598537-34598579)
chr6 (63-98)||(14244051-14244086)
chr6 (60-90)||(6294557-6294587)
chr6 (57-99)||(30781416-30781458)
chr6 (57-95)||(32577482-32577520)
chr6 (57-94)||(4945264-4945301)
chr6 (57-89)||(7564182-7564214)
chr6 (58-98)||(17422274-17422314)
chr6 (47-99)||(24102051-24102103)
[»] chr4 (9 HSPs)
chr4 (57-98)||(32369930-32369971)
chr4 (46-88)||(18783987-18784029)
chr4 (46-99)||(3458172-3458225)
chr4 (56-99)||(26369447-26369490)
chr4 (57-96)||(31277042-31277081)
chr4 (56-98)||(12441788-12441830)
chr4 (57-98)||(843159-843200)
chr4 (61-90)||(2796554-2796583)
chr4 (57-93)||(12710008-12710044)
[»] chr3 (12 HSPs)
chr3 (57-92)||(49636844-49636879)
chr3 (47-98)||(28576716-28576767)
chr3 (57-104)||(32166201-32166248)
chr3 (57-100)||(47542533-47542576)
chr3 (57-90)||(18268023-18268056)
chr3 (47-92)||(21768612-21768657)
chr3 (51-92)||(55053787-55053828)
chr3 (47-99)||(7563206-7563258)
chr3 (52-92)||(31207845-31207885)
chr3 (57-93)||(36301998-36302034)
chr3 (47-91)||(41036776-41036820)
chr3 (74-122)||(55108269-55108317)
[»] chr1 (6 HSPs)
chr1 (50-93)||(26698193-26698236)
chr1 (57-104)||(29230059-29230106)
chr1 (57-91)||(48317604-48317638)
chr1 (57-98)||(1118414-1118455)
chr1 (58-91)||(4769327-4769360)
chr1 (60-97)||(6440870-6440907)
[»] chr2 (13 HSPs)
chr2 (52-98)||(11781576-11781622)
chr2 (57-97)||(14268751-14268791)
chr2 (57-96)||(13252319-13252358)
chr2 (56-98)||(6736490-6736532)
chr2 (57-99)||(8765419-8765461)
chr2 (57-99)||(28341323-28341365)
chr2 (33-90)||(30563417-30563474)
chr2 (45-97)||(31095144-31095197)
chr2 (57-97)||(34687007-34687048)
chr2 (57-97)||(34709419-34709460)
chr2 (47-92)||(39459790-39459835)
chr2 (57-89)||(17427327-17427359)
chr2 (57-97)||(42043215-42043255)
[»] scaffold0147 (1 HSPs)
scaffold0147 (46-99)||(37670-37723)
[»] chr7 (8 HSPs)
chr7 (57-120)||(18750852-18750917)
chr7 (57-98)||(28266474-28266515)
chr7 (62-98)||(31020714-31020750)
chr7 (61-100)||(40826513-40826552)
chr7 (60-92)||(7139462-7139494)
chr7 (58-98)||(13803668-13803708)
chr7 (63-91)||(13859528-13859556)
chr7 (47-99)||(22371078-22371130)
[»] chr5 (3 HSPs)
chr5 (57-88)||(28322251-28322282)
chr5 (57-90)||(9878050-9878083)
chr5 (46-91)||(39828473-39828518)


Alignment Details
Target: chr8 (Bit Score: 442; Significance: 0; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 442; E-Value: 0
Query Start/End: Original strand, 15 - 464
Target Start/End: Complemental strand, 2517190 - 2516741
Alignment:
Q  15 caaaggcatgtctggtatctgacaccaacataacacgtgtagttacattcaattaattcattttctcaaattattaccggtgtcattgtcagtgtcgtag 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2517190 caaaggcatgtctggtatctgacaccaacataacacgtgtagttacattcaattaattcattttctcaaattattaccggtgtcattgtcagtgtcgtag 2517091  T
Q  115 tgtcgtgtcctgtgtgagtgcttcataggttttgaatttccctaattacaataacaacaatcaaggtctttgctcaatacttatattccgaaagtactgt 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2517090 tgtcgtgtcctgtgtgagtgcttcataggttttgaatttccctaattacaataacaacaatcaaggtctttgctcaatacttatattccgaaagtactgt 2516991  T
Q  215 tacattgcaaaattactagaatttgcctaaatatattagaaaatttcaattctacaagtgttacatagttagcctaatcgaagagaattttagcagccag 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2516990 tacattgcaaaattactagaatttgcctaaatatattagaaaatttcaattctacaagtgttacatagttagcctaatcgaagaaaattttagcagccag 2516891  T
Q  315 cagaaacaaacaatagtttcttaattcttgggttaggaatgatttgttgtaagttgtaacttgaaaacgagtatgattaccaagaatccatttagtttct 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2516890 cagaaacaaacaatagtttcttaattcttgggttaggaatgatttgttgtaagttgtaacttgaaaacgagtatgattaccaagaatccatttagtttct 2516791  T
Q  415 ttttattgaccaacaaaaatattgtcttcctttactttaatgtacgtctt 464  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2516790 ttttattgaccaacaaaaatattgtcttcctttactttaatgtacatctt 2516741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 10170375 - 10170437
Alignment:
Q  28 ggtatctgacaccaacataacacgtgtagttacattcaattaattcattttctcaaattatta 90  Q
    |||||| |||||||||| ||| | ||||||||||||||||||||| |||||||||||||||||    
T  10170375 ggtatcagacaccaacacaacccatgtagttacattcaattaatttattttctcaaattatta 10170437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 2515776 - 2515727
Alignment:
Q  135 cttcataggttttgaatttccctaattacaataacaacaatcaaggtctt 184  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  2515776 cttcataggttctaaatttccctaattacaataacaacaatcaaggtctt 2515727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 34259803 - 34259854
Alignment:
Q  47 acacgtgtagttacattcaattaattcattttctcaaattattaccggtgtc 98  Q
    |||||| |||||| ||||||||| ||||||||||||||||||||||| ||||    
T  34259803 acacgtctagttatattcaattatttcattttctcaaattattaccgatgtc 34259854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 267
Target Start/End: Complemental strand, 2506128 - 2506022
Alignment:
Q  161 tacaataacaacaatcaaggtctttgctcaatacttatattccgaaagtactgttacattgcaaaattactagaatttgcctaaatatattagaaaattt 260  Q
    ||||||| ||||||||||||| |||||||| ||  |||||| ||||| |||||| |  |  | ||| |||||||||| |||||| | ||||| |||||||    
T  2506128 tacaatatcaacaatcaaggtttttgctcactagctatattacgaaattactgtaatgtaaccaaaatactagaattagcctaattttattacaaaattt 2506029  T
Q  261 caattct 267  Q
    |||||||    
T  2506028 caattct 2506022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 99
Target Start/End: Complemental strand, 3066083 - 3066041
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccggtgtca 99  Q
    ||||||||||||||| |||||||||||||||||||| ||||||    
T  3066083 ttacattcaattaatccattttctcaaattattacctgtgtca 3066041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 2512692 - 2512635
Alignment:
Q  254 aaaatttcaattctacaagtgtt-acatagttagcctaatcgaagagaattttagcag 310  Q
    ||||||||||||||| || |||| |||||||||||||||| |||||||||| ||||||    
T  2512692 aaaatttcaattctagaaatgtttacatagttagcctaattgaagagaattgtagcag 2512635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 25799187 - 25799154
Alignment:
Q  59 acattcaattaattcattttctcaaattattacc 92  Q
    ||||||||||||||||||||||||||||||||||    
T  25799187 acattcaattaattcattttctcaaattattacc 25799154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 1979453 - 1979413
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccggtgt 97  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  1979453 ttacatttaattaattaattttctcaaattattaccggtgt 1979413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 93
Target Start/End: Complemental strand, 16824426 - 16824392
Alignment:
Q  59 acattcaattaattcattttctcaaattattaccg 93  Q
    |||||||| ||||||||||||||||||||||||||    
T  16824426 acattcaaataattcattttctcaaattattaccg 16824392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 95
Target Start/End: Original strand, 31551857 - 31551891
Alignment:
Q  61 attcaattaattcattttctcaaattattaccggt 95  Q
    |||||||| ||||||||||||||||||||||||||    
T  31551857 attcaatttattcattttctcaaattattaccggt 31551891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 43534975 - 43534933
Alignment:
Q  47 acacgtgtagttacattcaattaattcattttctcaaattatt 89  Q
    |||| ||||||||||||||| || |||||||||||||||||||    
T  43534975 acacatgtagttacattcaaatatttcattttctcaaattatt 43534933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 25488834 - 25488801
Alignment:
Q  59 acattcaattaattcattttctcaaattattacc 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  25488834 acattcaattaattcattttctcaaattaatacc 25488801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 6501546 - 6501494
Alignment:
Q  47 acacgtgtagttacattcaattaattcattttctcaaattattaccggtgtca 99  Q
    |||| ||| |||||||| ||||| |||||| ||||||||||||||| ||||||    
T  6501546 acacatgtggttacatttaattatttcattctctcaaattattaccagtgtca 6501494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 14496033 - 14496084
Alignment:
Q  47 acacgtgtagttacattcaattaattcattttctcaaattattaccggtgtca 99  Q
    |||| |||||||||||||||| | | ||||||||||||||||||| |||||||    
T  14496033 acacatgtagttacattcaatcact-cattttctcaaattattactggtgtca 14496084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 28144067 - 28144103
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccg 93  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  28144067 ttacattctattaattgattttctcaaattattaccg 28144103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 29096987 - 29096951
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccg 93  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  29096987 ttacattcaattaatttattttcttaaattattaccg 29096951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 34625775 - 34625734
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccggtgtc 98  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  34625775 ttacattcaattaattcattttctcaaattattatcggtgtc 34625734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 99
Target Start/End: Complemental strand, 34598579 - 34598537
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccggtgtca 99  Q
    |||||| ||||||||||||||||||||||||||| ||||||||    
T  34598579 ttacatccaattaattcattttctcaaattattatcggtgtca 34598537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 98
Target Start/End: Original strand, 14244051 - 14244086
Alignment:
Q  63 tcaattaattcattttctcaaattattaccggtgtc 98  Q
    ||||||||||||||||||||||||| ||||||||||    
T  14244051 tcaattaattcattttctcaaattactaccggtgtc 14244086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 90
Target Start/End: Original strand, 6294557 - 6294587
Alignment:
Q  60 cattcaattaattcattttctcaaattatta 90  Q
    |||||||||||||||||||||||||||||||    
T  6294557 cattcaattaattcattttctcaaattatta 6294587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 99
Target Start/End: Original strand, 30781416 - 30781458
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccggtgtca 99  Q
    ||||||||| |||||||||||| |||||||| |||||||||||    
T  30781416 ttacattcagttaattcattttatcaaattagtaccggtgtca 30781458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 95
Target Start/End: Original strand, 32577482 - 32577520
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccggt 95  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  32577482 ttacattcaattaattcattttctcaaatcatcaccggt 32577520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 94
Target Start/End: Complemental strand, 4945301 - 4945264
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccgg 94  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  4945301 ttacattcaattaattcattttctcaaacaattaccgg 4945264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 89
Target Start/End: Original strand, 7564182 - 7564214
Alignment:
Q  57 ttacattcaattaattcattttctcaaattatt 89  Q
    |||||||||||||||| ||||||||||||||||    
T  7564182 ttacattcaattaatttattttctcaaattatt 7564214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 17422274 - 17422314
Alignment:
Q  58 tacattcaattaattcattttctcaaattattaccggtgtc 98  Q
    ||||||||||||  ||||||||||||||||||| |||||||    
T  17422274 tacattcaattatatcattttctcaaattattatcggtgtc 17422314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 24102051 - 24102103
Alignment:
Q  47 acacgtgtagttacattcaattaattcattttctcaaattattaccggtgtca 99  Q
    |||||||| ||||||||||| || |||| || |||||||||||||| ||||||    
T  24102051 acacgtgtggttacattcaaatagttcacttactcaaattattaccagtgtca 24102103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 32369930 - 32369971
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccggtgtc 98  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  32369930 ttacattcaattaattcattttctcaaattattatcggtgtc 32369971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 18784029 - 18783987
Alignment:
Q  46 aacacgtgtagttacattcaattaattcattttctcaaattat 88  Q
    |||||||||| ||||||||||||| ||||||||||||||||||    
T  18784029 aacacgtgtaattacattcaattacttcattttctcaaattat 18783987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 3458172 - 3458225
Alignment:
Q  46 aacacgtgtagttacattcaattaattcattttctcaaattattaccggtgtca 99  Q
    ||||||| || ||||||||||||| ||||||||||| | |||||||||||||||    
T  3458172 aacacgtataattacattcaattatttcattttctccatttattaccggtgtca 3458225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 26369447 - 26369490
Alignment:
Q  56 gttacattcaattaattcattttctcaaattattaccggtgtca 99  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||    
T  26369447 gttacattcaaataattcattttctcaaattactaccgatgtca 26369490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 96
Target Start/End: Original strand, 31277042 - 31277081
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccggtg 96  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  31277042 ttacattcaattagttcattttctcaaattattatcggtg 31277081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 12441788 - 12441830
Alignment:
Q  56 gttacattcaattaattcattttctcaaattattaccggtgtc 98  Q
    |||| |||||||| ||||||||||||||| |||||||||||||    
T  12441788 gttagattcaattgattcattttctcaaagtattaccggtgtc 12441830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 843159 - 843200
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccggtgtc 98  Q
    |||| ||||| ||||||||||||||||||||||||| |||||    
T  843159 ttacgttcaaataattcattttctcaaattattaccagtgtc 843200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 2796583 - 2796554
Alignment:
Q  61 attcaattaattcattttctcaaattatta 90  Q
    ||||||||||||||||||||||||||||||    
T  2796583 attcaattaattcattttctcaaattatta 2796554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 12710044 - 12710008
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccg 93  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  12710044 ttacgttcaattaatttattttctcaaattattaccg 12710008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000004; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 92
Target Start/End: Original strand, 49636844 - 49636879
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattacc 92  Q
    ||||||||||||||||||||||||||||||||||||    
T  49636844 ttacattcaattaattcattttctcaaattattacc 49636879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 28576767 - 28576716
Alignment:
Q  47 acacgtgtagttacattcaattaattcattttctcaaattattaccggtgtc 98  Q
    |||| |||| ||||||||||||   |||||||||||||||||||||||||||    
T  28576767 acacatgtaattacattcaattttgtcattttctcaaattattaccggtgtc 28576716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 104
Target Start/End: Original strand, 32166201 - 32166248
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccggtgtcattgtc 104  Q
    |||||||||||||  ||||||||||||||||||||| |||||| ||||    
T  32166201 ttacattcaattatgtcattttctcaaattattaccagtgtcaatgtc 32166248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 47542576 - 47542533
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccggtgtcat 100  Q
    |||||||||| || |||||||||||||||||||||| |||||||    
T  47542576 ttacattcaaatagttcattttctcaaattattaccagtgtcat 47542533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 90
Target Start/End: Original strand, 18268023 - 18268056
Alignment:
Q  57 ttacattcaattaattcattttctcaaattatta 90  Q
    |||| |||||||||||||||||||||||||||||    
T  18268023 ttacgttcaattaattcattttctcaaattatta 18268056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 21768657 - 21768612
Alignment:
Q  47 acacgtgtagttacattcaattaattcattttctcaaattattacc 92  Q
    |||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  21768657 acacatgtggttacgttcaaataattcattttctcaaattattacc 21768612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 55053828 - 55053787
Alignment:
Q  51 gtgtagttacattcaattaattcattttctcaaattattacc 92  Q
    |||||||||||||||  ||||||||||||| |||||||||||    
T  55053828 gtgtagttacattcatataattcattttcttaaattattacc 55053787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 7563206 - 7563258
Alignment:
Q  47 acacgtgtagttacattcaattaattcattttctcaaattattaccggtgtca 99  Q
    |||||||||| |||||||||||| | ||| ||||||||||||||  |||||||    
T  7563206 acacgtgtagatacattcaattattccatattctcaaattattattggtgtca 7563258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 31207885 - 31207845
Alignment:
Q  52 tgtagttacattcaattaattcattttctcaaattattacc 92  Q
    ||||||||||||||||||  |||||||||||||| ||||||    
T  31207885 tgtagttacattcaattatgtcattttctcaaataattacc 31207845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 36302034 - 36301998
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccg 93  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  36302034 ttacattcaattaatttattttctcacattattaccg 36301998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 41036776 - 41036820
Alignment:
Q  47 acacgtgtagttacattcaattaattcattttctcaaattattac 91  Q
    |||||||| ||||||||||| ||  ||||||||||||||||||||    
T  41036776 acacgtgtggttacattcaactatatcattttctcaaattattac 41036820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 55108269 - 55108317
Alignment:
Q  74 attttctcaaattattaccggtgtcattgtcagtgtcgtagtgtcgtgt 122  Q
    ||||| |||||||||||||||||||||||||| | |  |||||||||||    
T  55108269 attttatcaaattattaccggtgtcattgtcaatatattagtgtcgtgt 55108317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000004; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 93
Target Start/End: Original strand, 26698193 - 26698236
Alignment:
Q  50 cgtgtagttacattcaattaattcattttctcaaattattaccg 93  Q
    |||||| |||||||||||||||||||||||||| ||||||||||    
T  26698193 cgtgtaattacattcaattaattcattttctcagattattaccg 26698236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 29230106 - 29230059
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccggtgtcattgtc 104  Q
    |||||||||||||  |||||||||||||||||||||||||||| ||||    
T  29230106 ttacattcaattatgtcattttctcaaattattaccggtgtcaatgtc 29230059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 91
Target Start/End: Complemental strand, 48317638 - 48317604
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattac 91  Q
    ||||||||||||| |||||||||||||||||||||    
T  48317638 ttacattcaattatttcattttctcaaattattac 48317604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 1118414 - 1118455
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccggtgtc 98  Q
    |||||||||||||||||||||| ||||||||| ||| |||||    
T  1118414 ttacattcaattaattcattttttcaaattatcacccgtgtc 1118455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 4769327 - 4769360
Alignment:
Q  58 tacattcaattaattcattttctcaaattattac 91  Q
    ||||||||||||| ||||||||||||||||||||    
T  4769327 tacattcaattaactcattttctcaaattattac 4769360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 6440870 - 6440907
Alignment:
Q  60 cattcaattaattcattttctcaaattattaccggtgt 97  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  6440870 cattcaataaattcattttctcaaattattaccagtgt 6440907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 11781576 - 11781622
Alignment:
Q  52 tgtagttacattcaattaattcattttctcaaattattaccggtgtc 98  Q
    ||||||||||||||| || ||||||||||||||||||||| ||||||    
T  11781576 tgtagttacattcaaatatttcattttctcaaattattactggtgtc 11781622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 14268751 - 14268791
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccggtgt 97  Q
    |||| ||||||||| ||||||||||||||||||||||||||    
T  14268751 ttacgttcaattaagtcattttctcaaattattaccggtgt 14268791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 96
Target Start/End: Original strand, 13252319 - 13252358
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccggtg 96  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  13252319 ttacattcaactaattcattttctcacattattaccggtg 13252358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 6736532 - 6736490
Alignment:
Q  56 gttacattcaattaattcattttctcaaattattaccggtgtc 98  Q
    |||||||||||||| | ||| ||||||||||||||||||||||    
T  6736532 gttacattcaattattccatattctcaaattattaccggtgtc 6736490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 99
Target Start/End: Original strand, 8765419 - 8765461
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccggtgtca 99  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||    
T  8765419 ttacattcaattaattcgttttcttaaattatcaccggtgtca 8765461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 99
Target Start/End: Complemental strand, 28341365 - 28341323
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccggtgtca 99  Q
    ||||||| |||||||||||||||||||| ||||||||| ||||    
T  28341365 ttacatttaattaattcattttctcaaactattaccggcgtca 28341323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 30563474 - 30563417
Alignment:
Q  33 ctgacaccaacataacacgtgtagttacattcaattaattcattttctcaaattatta 90  Q
    |||||||| ||| ||||| | |||||||||| |||||  |||||||||||||||||||    
T  30563474 ctgacaccgacacaacacctatagttacattgaattatgtcattttctcaaattatta 30563417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 31095197 - 31095144
Alignment:
Q  45 taacacgtgtagttacattcaattaattc-attttctcaaattattaccggtgt 97  Q
    |||||| |||||||| ||||||||| ||| ||||||||||||||||||| ||||    
T  31095197 taacacatgtagttatattcaattacttccattttctcaaattattaccagtgt 31095144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 34687048 - 34687007
Alignment:
Q  57 ttacattcaattaat-tcattttctcaaattattaccggtgt 97  Q
    |||| |||||||||| ||||||||||||||||||||||||||    
T  34687048 ttactttcaattaatatcattttctcaaattattaccggtgt 34687007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 34709460 - 34709419
Alignment:
Q  57 ttacattcaattaat-tcattttctcaaattattaccggtgt 97  Q
    |||| |||||||||| ||||||||||||||||||||||||||    
T  34709460 ttactttcaattaatatcattttctcaaattattaccggtgt 34709419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 39459835 - 39459790
Alignment:
Q  47 acacgtgtagttacattcaattaattcattttctcaaattattacc 92  Q
    ||||||||  ||||||||||||||||||||| || |||||||||||    
T  39459835 acacgtgtgattacattcaattaattcatttccttaaattattacc 39459790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 89
Target Start/End: Original strand, 17427327 - 17427359
Alignment:
Q  57 ttacattcaattaattcattttctcaaattatt 89  Q
    |||| ||||||||||||||||||||||||||||    
T  17427327 ttaccttcaattaattcattttctcaaattatt 17427359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 42043215 - 42043255
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccggtgt 97  Q
    |||||||||||||||||||||| | ||||||||| ||||||    
T  42043215 ttacattcaattaattcattttattaaattattatcggtgt 42043255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 37670 - 37723
Alignment:
Q  46 aacacgtgtagttacattcaattaattcattttctcaaattattaccggtgtca 99  Q
    ||||||| || ||||||||||||| ||||||||||| | |||||||||||||||    
T  37670 aacacgtataattacattcaattatttcattttctccatttattaccggtgtca 37723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000007; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 18750917 - 18750852
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccggtgtc-at-tgtcagtgtcgtagtgtcgt 120  Q
    |||||||||||||  ||||||||| |||||||||||| |||| || ||||||||||||||||||||    
T  18750917 ttacattcaattatgtcattttcttaaattattaccgttgtcgatgtgtcagtgtcgtagtgtcgt 18750852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 28266515 - 28266474
Alignment:
Q  57 ttacattcaattaattcattttctcaaattattaccggtgtc 98  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  28266515 ttacatccaattaatttattttctcaaattattaccggtgtc 28266474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 31020714 - 31020750
Alignment:
Q  62 ttcaattaattcattttctcaaattattaccggtgtc 98  Q
    ||||||||||||||||||||||||| |||||||||||    
T  31020714 ttcaattaattcattttctcaaattgttaccggtgtc 31020750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 100
Target Start/End: Complemental strand, 40826552 - 40826513
Alignment:
Q  61 attcaattaattcattttctcaaattattaccggtgtcat 100  Q
    |||||||||||||||||||||||||||| ||| |||||||    
T  40826552 attcaattaattcattttctcaaattatcaccagtgtcat 40826513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 92
Target Start/End: Original strand, 7139462 - 7139494
Alignment:
Q  60 cattcaattaattcattttctcaaattattacc 92  Q
    ||||||||||||||||||||||||| |||||||    
T  7139462 cattcaattaattcattttctcaaaatattacc 7139494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 13803708 - 13803668
Alignment:
Q  58 tacattcaattaattcattttctcaaattattaccggtgtc 98  Q
    |||| ||||||| |||||||||||||||||||||| |||||    
T  13803708 tacactcaattatttcattttctcaaattattacctgtgtc 13803668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 91
Target Start/End: Complemental strand, 13859556 - 13859528
Alignment:
Q  63 tcaattaattcattttctcaaattattac 91  Q
    |||||||||||||||||||||||||||||    
T  13859556 tcaattaattcattttctcaaattattac 13859528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 22371130 - 22371078
Alignment:
Q  47 acacgtgtagttacattcaattaattcattttctcaaattattaccggtgtca 99  Q
    |||| |||||||||||||||||| ||| |||||||| |||| |||| ||||||    
T  22371130 acacatgtagttacattcaattatttccttttctcatattaataccagtgtca 22371078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 88
Target Start/End: Complemental strand, 28322282 - 28322251
Alignment:
Q  57 ttacattcaattaattcattttctcaaattat 88  Q
    ||||||||||||||||||||||||||||||||    
T  28322282 ttacattcaattaattcattttctcaaattat 28322251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 90
Target Start/End: Original strand, 9878050 - 9878083
Alignment:
Q  57 ttacattcaattaattcattttctcaaattatta 90  Q
    ||||||||||||||||||| ||||||||||||||    
T  9878050 ttacattcaattaattcatattctcaaattatta 9878083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 39828518 - 39828473
Alignment:
Q  46 aacacgtgtagttacattcaattaattcattttctcaaattattac 91  Q
    ||||| ||| |||||||||||||| ||||| |||||||||||||||    
T  39828518 aacacatgtggttacattcaattatttcatattctcaaattattac 39828473  T

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