View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2154_high_1 (Length: 538)
Name: NF2154_high_1
Description: NF2154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2154_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 443; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 443; E-Value: 0
Query Start/End: Original strand, 24 - 523
Target Start/End: Original strand, 39508115 - 39508613
Alignment:
| Q |
24 |
ctccctcaatagaaacaaaacaagaacaaccaaattagtacatattgccacaagctccaaaagaggcaatccaaggatcttactgaaaagggtattccac |
123 |
Q |
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| T |
39508115 |
ctccctcaatagaaacaaaacaagaacagccaaattagtacatattgcaacaagctccaaaacaggcaatccaaggatcttactgaaaagggtattccac |
39508214 |
T |
|
| Q |
124 |
aatgacccttttgaagaatacaacgttgtaggcaagatttcattgagagccatgaggaaaaagatgatttatgagaagaatattgagtcggtgtgaataa |
223 |
Q |
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| T |
39508215 |
aatgacccttttgaagaatacaacgttgtaggcaagatttcattgagagccatgaggaaaaagatgatttatgagaagaatattgagtcggtgtgaataa |
39508314 |
T |
|
| Q |
224 |
gaagatgaagaagtgaaagagagtagtaacgaaaagcaaaagcaagtgatgtcatcaaaagcaggtactaagaatgaagaacatatttgcaccatgtgga |
323 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
39508315 |
gaagatgaagaagtgaaagagagtagtaacgaaaagcaaaagcaagtgatgtcatcaaaagcaggtactaagaatgaagaacatttttgcaccatgtgga |
39508414 |
T |
|
| Q |
324 |
gttagattctgtgtgacacattgcacgttaaaacaaaagaggtttaaattcatcagcatcaaacacgaaacacgaagaacagaaagnnnnnnntaagagt |
423 |
Q |
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| T |
39508415 |
gttagattctgtgtgacacattgcacgttgaaacaaaagaggttt-aattcatcagcatcaaacacgaaacacgaagaacagaaagaaaaaaataagagt |
39508513 |
T |
|
| Q |
424 |
ttgcagctgcaaagagacaaaaagggtatgattattaaggaatcaaaattaaaattctatacaaacctgaatttttgctattagatcatgtgaagattct |
523 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
39508514 |
ttgcagctacaaagagacaaaaagggtatgattattaaggaatcaaaattaaaattctatacaaacctgaatttttgctcttagatcatgtgaagattct |
39508613 |
T |
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