View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21550_low_11 (Length: 339)
Name: NF21550_low_11
Description: NF21550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21550_low_11 |
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Alignment Details
Target: chr6 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 16 - 320
Target Start/End: Original strand, 25033133 - 25033437
Alignment:
| Q |
16 |
atatagataaacattgacacattgccctcgtctatatgttttctttcccaaatcaaaatattcttatcctcaactaatttgaagtttaattatttctact |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25033133 |
atatagataaacattgacacattgccctcgtctatatgttttctttcccaaatcaaaatattcttatcctcaactaatttgaagtttaattatttctact |
25033232 |
T |
|
| Q |
116 |
ttagacataagcatgaaacatacaaagttggattctatttcacgtttttattttattttatcctaaataaataaaaacataacattgtggagtgacctat |
215 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25033233 |
ttagacataaacatgaaacatacaaagttggattctatttcacgtttttattttattttatcctaaataaataaaaacataacattgtggagtgacctat |
25033332 |
T |
|
| Q |
216 |
aatcccacctaacgattaaccccaagctcttggaagtggcaagatatttttgagaaaatgacaatttgcatgcacgtgaagatttttggttttcatcctc |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25033333 |
aatcccacctaacgattaaccccaagctcttggaagtggcaagatatttttgagaaaatgacaatttgcatgcacgtgaagatttttggttttcatcctc |
25033432 |
T |
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| Q |
316 |
tttac |
320 |
Q |
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||||| |
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| T |
25033433 |
tttac |
25033437 |
T |
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