View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21551_high_6 (Length: 422)
Name: NF21551_high_6
Description: NF21551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21551_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 392; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 392; E-Value: 0
Query Start/End: Original strand, 1 - 408
Target Start/End: Original strand, 45514817 - 45515224
Alignment:
| Q |
1 |
tcattgcaaattcttatattgcgacaaaatatgtttagcgctagtattccttcacaactatgtcaactcaaatcactccaaattctggacctctctagaa |
100 |
Q |
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| T |
45514817 |
tcattgcaaattcttatattgcgacaaaatatgtttagcgctagtattccttcacaactatgtcaactcaaatcactccaaattctggacctctctagaa |
45514916 |
T |
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| Q |
101 |
acaaattgcaaggttcaatacctcgatgcataggaaaccttgaaggaatgacattgggaaaatcaacatcatcatcagttcatatgcagtcatacaattt |
200 |
Q |
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| T |
45514917 |
acaaattgcaaggttcaatacctcgatgcataggaaaccttgaaggaatgacattgggaaaatcaacatcatcatcagttcatatgcagtcatacaattt |
45515016 |
T |
|
| Q |
201 |
aatagcagatgctcctcagacatggtcaaatgagtttcttacagatgtcaatgcattacctcctagtactccggttgattggcctagtcaatttgtcacg |
300 |
Q |
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| T |
45515017 |
aatagcagatgctcctcagacatggtcaaatgagtttcttacagatgtcaatgcattacctcctagtactccggttgattggcctagtcaatttgtcacg |
45515116 |
T |
|
| Q |
301 |
gaaatagtgaaaggaacagaacttgagtataccaaaatatttgagcttgtggtcatcatggacttgtcacaaaacaatttggttggattcattccaaatg |
400 |
Q |
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| T |
45515117 |
gaagtagtgaaaggaacagaacttgagtataccaaaatattggagcttgtggtcaacatggacttgtcacaaaacaatttggttggattcattccaaatg |
45515216 |
T |
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| Q |
401 |
aaagcaca |
408 |
Q |
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| T |
45515217 |
aaatcaca |
45515224 |
T |
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