View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21553_high_100 (Length: 226)
Name: NF21553_high_100
Description: NF21553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21553_high_100 |
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Alignment Details
Target: chr5 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 10506431 - 10506650
Alignment:
| Q |
1 |
tccttcatagctaagtttcagttttatattagaaaatgttgcatgtgccttaaaattaccatttttcgccatgacacggatgtttacttgtgtttgaaga |
100 |
Q |
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| T |
10506431 |
tccttcatagctaagtttcagttttatattagaaaatgttgcatgtgccttaaaattaccatttttcgccatgacacggatgtttacttgtgtttgaaga |
10506530 |
T |
|
| Q |
101 |
aggccagcatagtcatttctgaaaagatctaaatgagcatttgctatgcttattgtagggactcctggatgaattactatgtaaccaataaagactacta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
10506531 |
aggccagcatagtcatttctgaaaagatctaaatgagcatttgctatgcttattgtagggactcttggatgaattactatgtaaccaataaagactacta |
10506630 |
T |
|
| Q |
201 |
cacctccaattacaactcct |
220 |
Q |
| |
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|||||||||||||||||||| |
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| T |
10506631 |
cacctccaattacaactcct |
10506650 |
T |
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