View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21553_high_29 (Length: 478)

Name: NF21553_high_29
Description: NF21553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21553_high_29
NF21553_high_29
[»] chr1 (49 HSPs)
chr1 (226-322)||(38595152-38595248)
chr1 (228-322)||(27564741-27564835)
chr1 (226-322)||(2581913-2582009)
chr1 (228-322)||(3000319-3000413)
chr1 (224-322)||(38632327-38632425)
chr1 (226-322)||(8346394-8346490)
chr1 (227-322)||(51898689-51898784)
chr1 (228-322)||(9474882-9474976)
chr1 (228-322)||(48716288-48716382)
chr1 (231-322)||(44548382-44548473)
chr1 (227-322)||(50630457-50630552)
chr1 (228-322)||(47452326-47452420)
chr1 (228-322)||(43132-43226)
chr1 (352-405)||(27564658-27564711)
chr1 (352-405)||(37649322-37649375)
chr1 (352-405)||(48716205-48716258)
chr1 (226-318)||(5959010-5959102)
chr1 (226-322)||(32813245-32813341)
chr1 (228-322)||(37649198-37649292)
chr1 (227-322)||(41758804-41758899)
chr1 (352-405)||(41758929-41758982)
chr1 (233-322)||(44453984-44454073)
chr1 (228-318)||(50591010-50591100)
chr1 (269-322)||(13414802-13414855)
chr1 (229-321)||(11152385-11152476)
chr1 (226-318)||(26274430-26274522)
chr1 (352-396)||(38632253-38632297)
chr1 (359-405)||(3000450-3000496)
chr1 (228-322)||(3302539-3302633)
chr1 (359-405)||(38595285-38595331)
chr1 (352-405)||(9474799-9474852)
chr1 (352-405)||(26274553-26274606)
chr1 (352-401)||(32813371-32813420)
chr1 (227-296)||(37926470-37926539)
chr1 (356-405)||(47452243-47452292)
chr1 (356-401)||(51898610-51898655)
chr1 (250-322)||(45044566-45044638)
chr1 (352-405)||(43256-43309)
chr1 (228-293)||(41608528-41608593)
chr1 (352-405)||(50630582-50630635)
chr1 (226-322)||(49811533-49811629)
chr1 (226-296)||(23597123-23597193)
chr1 (271-322)||(48489343-48489394)
chr1 (268-322)||(44334176-44334230)
chr1 (352-405)||(2582039-2582092)
chr1 (352-401)||(5958927-5958976)
chr1 (352-401)||(47748566-47748615)
chr1 (352-401)||(49811454-49811503)
chr1 (352-401)||(50590927-50590976)
[»] chr8 (53 HSPs)
chr8 (228-322)||(504127-504221)
chr8 (226-322)||(14547920-14548016)
chr8 (227-322)||(37038478-37038573)
chr8 (228-322)||(12831047-12831141)
chr8 (228-322)||(15197333-15197427)
chr8 (228-322)||(23122603-23122697)
chr8 (228-322)||(34012302-34012396)
chr8 (228-322)||(40423949-40424043)
chr8 (228-322)||(1179946-1180040)
chr8 (227-320)||(44507095-44507188)
chr8 (229-322)||(5957831-5957924)
chr8 (226-322)||(10284637-10284733)
chr8 (226-291)||(24307627-24307692)
chr8 (250-322)||(8841438-8841510)
chr8 (222-293)||(34307210-34307281)
chr8 (352-405)||(504044-504097)
chr8 (352-405)||(14548046-14548099)
chr8 (352-405)||(23122520-23122573)
chr8 (226-291)||(24307830-24307895)
chr8 (225-322)||(42221512-42221609)
chr8 (226-318)||(16383375-16383467)
chr8 (228-322)||(15048188-15048281)
chr8 (352-405)||(12831171-12831224)
chr8 (352-405)||(34012219-34012272)
chr8 (352-405)||(42710217-42710270)
chr8 (352-401)||(43414508-43414557)
chr8 (272-322)||(9122229-9122279)
chr8 (227-293)||(32032724-32032789)
chr8 (352-405)||(9122309-9122362)
chr8 (233-322)||(10621093-10621182)
chr8 (356-401)||(37038607-37038652)
chr8 (352-405)||(40423866-40423919)
chr8 (226-318)||(16056411-16056503)
chr8 (354-405)||(15197459-15197510)
chr8 (228-322)||(43414587-43414681)
chr8 (352-405)||(1179863-1179916)
chr8 (352-401)||(16056328-16056377)
chr8 (352-401)||(24307720-24307769)
chr8 (228-293)||(30479509-30479574)
chr8 (352-401)||(32707930-32707979)
chr8 (250-322)||(15258935-15259007)
chr8 (352-398)||(15048111-15048157)
chr8 (227-317)||(17443824-17443914)
chr8 (359-401)||(34307347-34307389)
chr8 (356-401)||(5957958-5958003)
chr8 (356-401)||(8841359-8841404)
chr8 (228-296)||(20074966-20075034)
chr8 (352-401)||(30479401-30479450)
chr8 (352-401)||(32032848-32032897)
chr8 (356-401)||(42354515-42354560)
chr8 (352-405)||(44507011-44507063)
chr8 (226-322)||(4854869-4854965)
chr8 (365-401)||(15258856-15258892)
[»] chr7 (64 HSPs)
chr7 (228-322)||(19329842-19329936)
chr7 (231-322)||(3783998-3784089)
chr7 (227-322)||(36361919-36362014)
chr7 (226-322)||(7389387-7389483)
chr7 (227-322)||(36362025-36362120)
chr7 (226-322)||(8080389-8080485)
chr7 (228-322)||(4999520-4999614)
chr7 (228-322)||(35137533-35137627)
chr7 (228-322)||(38267040-38267134)
chr7 (226-322)||(19436193-19436289)
chr7 (226-322)||(38837215-38837311)
chr7 (227-322)||(3434561-3434656)
chr7 (231-322)||(3694370-3694461)
chr7 (352-405)||(19329966-19330019)
chr7 (352-405)||(38837341-38837394)
chr7 (226-322)||(40957705-40957801)
chr7 (226-322)||(36208171-36208267)
chr7 (227-318)||(22343360-22343451)
chr7 (352-405)||(3434676-3434729)
chr7 (356-405)||(8080306-8080355)
chr7 (229-322)||(32951499-32951592)
chr7 (225-318)||(38044194-38044287)
chr7 (352-405)||(40957831-40957884)
chr7 (228-318)||(8238212-8238303)
chr7 (352-405)||(4999437-4999490)
chr7 (226-294)||(10343597-10343665)
chr7 (409-460)||(26042297-26042348)
chr7 (227-318)||(41915740-41915831)
chr7 (228-322)||(46374808-46374902)
chr7 (352-401)||(2318168-2318217)
chr7 (352-405)||(11044302-11044355)
chr7 (352-401)||(19436114-19436163)
chr7 (352-405)||(32951416-32951469)
chr7 (352-405)||(36362138-36362191)
chr7 (352-401)||(46374751-46374800)
chr7 (226-318)||(7727904-7727996)
chr7 (226-322)||(18207178-18207273)
chr7 (226-301)||(45223040-45223115)
chr7 (228-322)||(21234401-21234495)
chr7 (352-405)||(7389513-7389565)
chr7 (226-318)||(11044186-11044268)
chr7 (228-293)||(32564461-32564526)
chr7 (352-401)||(35523000-35523049)
chr7 (352-405)||(36361848-36361901)
chr7 (352-401)||(38044321-38044370)
chr7 (228-317)||(40846124-40846213)
chr7 (352-401)||(46033728-46033777)
chr7 (365-401)||(12311041-12311077)
chr7 (258-322)||(16374830-16374894)
chr7 (226-322)||(35468861-35468957)
chr7 (251-310)||(2318261-2318320)
chr7 (352-398)||(31736001-31736047)
chr7 (359-401)||(41915872-41915914)
chr7 (250-320)||(46033809-46033879)
chr7 (352-401)||(8238337-8238386)
chr7 (352-401)||(16374751-16374800)
chr7 (352-401)||(21234525-21234574)
chr7 (352-401)||(22343485-22343534)
chr7 (233-322)||(35522881-35522970)
chr7 (352-405)||(38267164-38267217)
chr7 (356-401)||(41423810-41423855)
chr7 (353-397)||(26296769-26296813)
chr7 (365-401)||(39255851-39255887)
chr7 (228-296)||(39255955-39256023)
[»] chr6 (33 HSPs)
chr6 (228-322)||(17598554-17598648)
chr6 (228-322)||(32869678-32869772)
chr6 (231-322)||(22880664-22880755)
chr6 (227-322)||(11427615-11427712)
chr6 (221-322)||(23128133-23128234)
chr6 (228-322)||(29857827-29857921)
chr6 (226-322)||(6209471-6209567)
chr6 (226-317)||(15832575-15832666)
chr6 (352-405)||(17598678-17598731)
chr6 (228-314)||(31109414-31109500)
chr6 (352-405)||(11427742-11427795)
chr6 (352-405)||(29857951-29858004)
chr6 (352-405)||(32869802-32869855)
chr6 (226-318)||(15990052-15990144)
chr6 (226-318)||(30341370-30341462)
chr6 (232-322)||(28536494-28536582)
chr6 (228-318)||(15508034-15508124)
chr6 (352-405)||(15832701-15832754)
chr6 (227-322)||(31976247-31976342)
chr6 (352-405)||(22880581-22880634)
chr6 (352-401)||(31110688-31110737)
chr6 (226-322)||(31110767-31110861)
chr6 (240-318)||(4231560-4231638)
chr6 (352-405)||(23128049-23128103)
chr6 (228-322)||(31953036-31953130)
chr6 (352-401)||(4231672-4231721)
chr6 (352-401)||(31976372-31976421)
chr6 (226-296)||(12732480-12732550)
chr6 (359-401)||(15989969-15990011)
chr6 (227-293)||(22422053-22422119)
chr6 (359-401)||(30341287-30341329)
chr6 (356-401)||(28536415-28536460)
chr6 (362-398)||(30870148-30870184)
[»] chr5 (43 HSPs)
chr5 (226-322)||(13811650-13811746)
chr5 (226-322)||(18520890-18520986)
chr5 (224-322)||(36732948-36733046)
chr5 (227-322)||(2740273-2740368)
chr5 (228-322)||(35785199-35785293)
chr5 (228-322)||(40145407-40145501)
chr5 (228-322)||(42414308-42414402)
chr5 (227-322)||(6679697-6679792)
chr5 (228-322)||(14831814-14831908)
chr5 (228-322)||(33149644-33149738)
chr5 (228-322)||(35943898-35943992)
chr5 (352-405)||(35785323-35785376)
chr5 (226-322)||(15409616-15409712)
chr5 (226-322)||(31008986-31009082)
chr5 (228-322)||(28177775-28177869)
chr5 (352-405)||(2740398-2740451)
chr5 (352-405)||(14831938-14831991)
chr5 (229-322)||(16327902-16327995)
chr5 (352-405)||(18520807-18520860)
chr5 (226-318)||(3921275-3921367)
chr5 (227-319)||(41470425-41470517)
chr5 (352-405)||(31132458-31132511)
chr5 (352-405)||(33149561-33149614)
chr5 (226-291)||(39688934-39688999)
chr5 (227-318)||(2252178-2252269)
chr5 (352-398)||(36732872-36732918)
chr5 (356-401)||(35943819-35943864)
chr5 (276-320)||(31132392-31132436)
chr5 (352-402)||(13811776-13811826)
chr5 (228-322)||(20073522-20073616)
chr5 (229-287)||(36875644-36875702)
chr5 (352-401)||(15409537-15409586)
chr5 (356-401)||(31009116-31009161)
chr5 (352-405)||(40145531-40145584)
chr5 (251-311)||(39557534-39557594)
chr5 (233-291)||(10356639-10356698)
chr5 (359-401)||(2252095-2252137)
chr5 (359-401)||(3921192-3921234)
chr5 (272-322)||(21370048-21370098)
chr5 (228-322)||(26720516-26720610)
chr5 (228-322)||(26990265-26990359)
chr5 (364-405)||(16115255-16115296)
chr5 (413-453)||(40753051-40753091)
[»] chr2 (58 HSPs)
chr2 (226-322)||(10249388-10249484)
chr2 (227-322)||(32505654-32505749)
chr2 (228-322)||(13438343-13438437)
chr2 (226-322)||(9058478-9058574)
chr2 (226-322)||(33436106-33436202)
chr2 (231-322)||(28863458-28863549)
chr2 (228-322)||(40701478-40701572)
chr2 (227-322)||(7465741-7465836)
chr2 (228-322)||(17473020-17473114)
chr2 (228-322)||(27864704-27864798)
chr2 (228-322)||(28381661-28381755)
chr2 (224-322)||(30915459-30915557)
chr2 (227-322)||(5574494-5574589)
chr2 (226-322)||(42257191-42257287)
chr2 (231-322)||(19930826-19930917)
chr2 (228-322)||(4060685-4060779)
chr2 (226-322)||(20700813-20700909)
chr2 (228-322)||(40613908-40614002)
chr2 (352-405)||(5574423-5574476)
chr2 (352-405)||(7465658-7465711)
chr2 (352-405)||(10249305-10249358)
chr2 (352-405)||(13438467-13438520)
chr2 (352-405)||(17473144-17473197)
chr2 (352-405)||(28863579-28863632)
chr2 (226-311)||(38882831-38882915)
chr2 (352-405)||(40701602-40701655)
chr2 (228-318)||(38732354-38732444)
chr2 (352-405)||(4060809-4060862)
chr2 (352-405)||(19930743-19930796)
chr2 (356-401)||(20700943-20700988)
chr2 (352-405)||(30915587-30915640)
chr2 (352-405)||(38882734-38882787)
chr2 (226-322)||(26891510-26891606)
chr2 (353-405)||(32505571-32505623)
chr2 (353-401)||(40613829-40613877)
chr2 (226-318)||(45097745-45097837)
chr2 (227-322)||(2533123-2533217)
chr2 (227-322)||(33436210-33436305)
chr2 (244-322)||(3439995-3440073)
chr2 (228-322)||(17820010-17820104)
chr2 (359-405)||(28381578-28381624)
chr2 (228-318)||(43490121-43490211)
chr2 (352-401)||(42257317-42257366)
chr2 (226-298)||(17823782-17823854)
chr2 (250-322)||(38273148-38273220)
chr2 (362-401)||(3440113-3440152)
chr2 (271-322)||(3737986-3738037)
chr2 (359-401)||(17823919-17823961)
chr2 (352-405)||(9058604-9058657)
chr2 (352-405)||(27864815-27864868)
chr2 (352-405)||(33436023-33436076)
chr2 (354-394)||(2533249-2533289)
chr2 (250-318)||(2997497-2997565)
chr2 (226-318)||(13365349-13365443)
chr2 (352-401)||(13365477-13365526)
chr2 (227-320)||(36168835-36168928)
chr2 (352-401)||(36168960-36169009)
chr2 (352-401)||(43490245-43490294)
[»] chr3 (53 HSPs)
chr3 (227-322)||(17470404-17470499)
chr3 (224-322)||(27714897-27714995)
chr3 (228-322)||(53982011-53982105)
chr3 (226-322)||(54868901-54868997)
chr3 (228-322)||(8076393-8076487)
chr3 (228-322)||(33644200-33644294)
chr3 (226-322)||(49607412-49607508)
chr3 (233-322)||(52629305-52629394)
chr3 (229-322)||(31456690-31456783)
chr3 (226-304)||(11095377-11095455)
chr3 (229-322)||(13898061-13898154)
chr3 (352-405)||(33644324-33644377)
chr3 (352-405)||(52629424-52629477)
chr3 (352-405)||(53982135-53982188)
chr3 (352-405)||(54868818-54868871)
chr3 (226-322)||(41189770-41189866)
chr3 (228-322)||(26141538-26141632)
chr3 (232-318)||(48587101-48587187)
chr3 (352-405)||(11095290-11095343)
chr3 (352-401)||(26141457-26141506)
chr3 (352-405)||(31456813-31456866)
chr3 (356-397)||(33118781-33118822)
chr3 (226-307)||(33118872-33118953)
chr3 (352-405)||(48587024-48587077)
chr3 (352-405)||(49607538-49607591)
chr3 (227-322)||(9562998-9563093)
chr3 (226-313)||(36707439-36707526)
chr3 (228-322)||(14623845-14623939)
chr3 (244-322)||(26754711-26754789)
chr3 (228-318)||(45058563-45058652)
chr3 (352-401)||(11347849-11347898)
chr3 (352-401)||(41189691-41189740)
chr3 (352-401)||(51419287-51419336)
chr3 (226-322)||(11347928-11348024)
chr3 (227-322)||(8956761-8956856)
chr3 (227-310)||(24699972-24700055)
chr3 (228-322)||(51419366-51419460)
chr3 (352-405)||(9563123-9563176)
chr3 (352-401)||(20764842-20764891)
chr3 (352-405)||(36707351-36707404)
chr3 (362-401)||(26754829-26754868)
chr3 (358-401)||(30801660-30801703)
chr3 (227-322)||(35536625-35536720)
chr3 (362-401)||(48375633-48375672)
chr3 (272-322)||(20764921-20764971)
chr3 (227-298)||(21746211-21746284)
chr3 (232-322)||(30801739-30801829)
chr3 (226-296)||(35965806-35965876)
chr3 (356-401)||(35536754-35536799)
chr3 (352-401)||(42823235-42823284)
chr3 (352-401)||(45058480-45058529)
chr3 (353-401)||(35965709-35965757)
chr3 (250-318)||(36331339-36331407)
[»] chr4 (52 HSPs)
chr4 (228-322)||(41236347-41236441)
chr4 (226-322)||(42044373-42044469)
chr4 (226-322)||(48183055-48183151)
chr4 (226-322)||(50052434-50052530)
chr4 (228-322)||(11511468-11511562)
chr4 (226-322)||(480453-480549)
chr4 (228-322)||(3481654-3481748)
chr4 (228-322)||(6034044-6034138)
chr4 (228-322)||(54473539-54473633)
chr4 (225-322)||(24995113-24995210)
chr4 (226-322)||(29239884-29239980)
chr4 (228-321)||(50526178-50526271)
chr4 (226-322)||(23608233-23608329)
chr4 (227-322)||(29234251-29234346)
chr4 (352-405)||(41236471-41236524)
chr4 (352-405)||(42044290-42044343)
chr4 (353-405)||(24995030-24995082)
chr4 (353-405)||(48182972-48183024)
chr4 (226-293)||(29547994-29548061)
chr4 (227-318)||(47986207-47986298)
chr4 (272-322)||(41823926-41823976)
chr4 (352-405)||(6034168-6034221)
chr4 (228-293)||(55079749-55079814)
chr4 (226-318)||(19670726-19670818)
chr4 (226-322)||(29977883-29977979)
chr4 (228-322)||(31910192-31910286)
chr4 (226-293)||(55475189-55475256)
chr4 (363-405)||(53352497-53352539)
chr4 (356-401)||(29240014-29240059)
chr4 (356-401)||(50526098-50526143)
chr4 (353-405)||(11511386-11511437)
chr4 (225-293)||(32766955-32767023)
chr4 (226-322)||(48647732-48647828)
chr4 (227-318)||(50813902-50813993)
chr4 (233-320)||(53352574-53352660)
chr4 (227-293)||(44536781-44536846)
chr4 (352-393)||(480382-480423)
chr4 (228-293)||(8343198-8343263)
chr4 (352-401)||(19670643-19670692)
chr4 (352-405)||(23608359-23608412)
chr4 (352-401)||(29547886-29547935)
chr4 (352-405)||(54473456-54473509)
chr4 (352-401)||(55475315-55475364)
chr4 (250-318)||(17983753-17983821)
chr4 (228-295)||(40574779-40574846)
chr4 (363-401)||(30036994-30037032)
chr4 (363-401)||(50052355-50052393)
chr4 (352-401)||(31910316-31910365)
chr4 (352-401)||(41824006-41824055)
chr4 (250-322)||(28480274-28480346)
chr4 (250-322)||(28481149-28481221)
chr4 (250-322)||(28482024-28482096)
[»] scaffold0321 (2 HSPs)
scaffold0321 (226-322)||(10115-10211)
scaffold0321 (352-405)||(10032-10085)
[»] scaffold0237 (2 HSPs)
scaffold0237 (228-322)||(4029-4123)
scaffold0237 (352-405)||(4153-4206)
[»] scaffold1268 (2 HSPs)
scaffold1268 (228-322)||(935-1029)
scaffold1268 (356-401)||(856-901)
[»] scaffold1267 (2 HSPs)
scaffold1267 (228-322)||(935-1029)
scaffold1267 (356-401)||(856-901)
[»] scaffold0316 (2 HSPs)
scaffold0316 (251-322)||(17077-17148)
scaffold0316 (363-401)||(17238-17276)
[»] scaffold0250 (1 HSPs)
scaffold0250 (152-227)||(6483-6560)
[»] scaffold0018 (2 HSPs)
scaffold0018 (241-293)||(152511-152563)
scaffold0018 (352-401)||(152622-152671)


Alignment Details
Target: chr1 (Bit Score: 73; Significance: 4e-33; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 38595152 - 38595248
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  38595152 aagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 38595248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 27564835 - 27564741
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||| | ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 27564741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 2581913 - 2582009
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2581913 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 2582009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 3000319 - 3000413
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||||||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 3000413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 224 - 322
Target Start/End: Complemental strand, 38632425 - 38632327
Alignment:
Q  224 agaagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||||| ||| ||||| ||||||||||||||| || || ||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  38632425 agaagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38632327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 8346490 - 8346394
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| |||  |||||||||||||||||||| |  ||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  8346490 aagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcaca 8346394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 51898784 - 51898689
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||| ||| ||| ||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 51898689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 9474976 - 9474882
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacaca 9474882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 48716382 - 48716288
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| ||||||||||||||| |  |||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48716288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 231 - 322
Target Start/End: Complemental strand, 44548473 - 44548382
Alignment:
Q  231 taatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||| ||| ||| ||||||||||||||||| |  |||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44548473 taatgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 44548382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 50630457 - 50630552
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||| ||| | ||| |||||||||||||||||  |||  |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50630457 agagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50630552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 47452420 - 47452326
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| |||||||| |||||| |  ||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcaca 47452326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 43132 - 43226
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| |||   ||||| | |||||||||  ||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcaca 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 27564711 - 27564658
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27564711 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcat 27564658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 37649322 - 37649375
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37649322 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcat 37649375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 48716258 - 48716205
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  48716258 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcat 48716205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 5959102 - 5959010
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    |||||| |||||| ||||||||| ||| ||||||||||| || ||||||||||||||||||||||||| ||  |||  |||||||||||||||    
T  5959102 aagagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaag 5959010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 32813245 - 32813341
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||| |||||| ||| ||| | ||||||||||||||| |  || |||||||||||||||||||||||||  |||| |||||||||||||||||||    
T  32813245 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcaca 32813341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 37649198 - 37649292
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaataca-tctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||  ||||||| |  |||||||||||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactct-ttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcaca 37649292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 41758804 - 41758899
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||| ||| ||||| |||  |||||||||| |  |||||| |||||||||||||||||||||| |||| |||||||||||||| ||||    
T  41758804 agagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacaca 41758899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 41758929 - 41758982
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  41758929 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcat 41758982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 233 - 322
Target Start/End: Original strand, 44453984 - 44454073
Alignment:
Q  233 atgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||| ||| ||||||||| |||||||||||||| |||| |||||||||||||||||||| ||  | ||||||| ||| ||||||||||    
T  44453984 atgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcaca 44454073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 228 - 318
Target Start/End: Complemental strand, 50591100 - 50591010
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    |||| |||||| ||||||||| ||||||||||||||| |  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 50591010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 322
Target Start/End: Original strand, 13414802 - 13414855
Alignment:
Q  269 ttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  13414802 ttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 13414855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 229 - 321
Target Start/End: Complemental strand, 11152476 - 11152385
Alignment:
Q  229 agtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcac 321  Q
    |||||||| | ||| ||||||| ||||||||||||| |  | |||| |||||||||||||||||||||| ||| || ||||||||||||||||    
T  11152476 agtaatgaaacatagacacctt-aggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcac 11152385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 226 - 318
Target Start/End: Original strand, 26274430 - 26274522
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    |||| |||||||| ||| ||||| ||| |||||||||||||  |||||| ||||| ||||||||||||| || ||||||||| || |||||||    
T  26274430 aagaataatgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaag 26274522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 352 - 396
Target Start/End: Complemental strand, 38632297 - 38632253
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtct 396  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  38632297 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtct 38632253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 359 - 405
Target Start/End: Original strand, 3000450 - 3000496
Alignment:
Q  359 atggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||    
T  3000450 atggggtgtacaagggtgtatggaaataatggatgtctatgtatcat 3000496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 3302633 - 3302539
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||| | ||||||| ||||| ||   | |||||||||||||||||||||||||||||||  ||||||||  |||||||||    
T  3302633 gagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcaca 3302539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 359 - 405
Target Start/End: Original strand, 38595285 - 38595331
Alignment:
Q  359 atggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||    
T  38595285 atggggtgtacaagggtgtatggaaataatggatgtctatgtatcat 38595331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 9474852 - 9474799
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||| ||||||||||||||||  ||||||| |||||||||||||||    
T  9474852 ctaatgcatgggatgtacaagggtgtatgagaataaagagtgtctatgtatcat 9474799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 26274553 - 26274606
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||| | || |||||||||||||| |||||||||||||||||||||||    
T  26274553 ctaatgcatgagatgcacaagggtgtatgggaataaagggtgtctatgtatcat 26274606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 401
Target Start/End: Original strand, 32813371 - 32813420
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||| ||||||||||||||||||||||| |||||| ||||||||||||    
T  32813371 ctaatgtatggggtgtacaagggtgtatgggaataaatggtgtctatgta 32813420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 296
Target Start/End: Complemental strand, 37926539 - 37926470
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgt 296  Q
    ||||| |||||| ||| | | |||||||||||||||||||| || ||||||||| |||||||||||||||    
T  37926539 agagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgt 37926470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 405
Target Start/End: Complemental strand, 47452292 - 47452243
Alignment:
Q  356 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||    
T  47452292 tgcatggggtgtacaaggatgtatgggaataaagagtgtctatgtatcat 47452243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 401
Target Start/End: Complemental strand, 51898655 - 51898610
Alignment:
Q  356 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||    
T  51898655 tgcatggggtgtacaagggtgtatagaaataaagggtgtttatgta 51898610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 45044638 - 45044566
Alignment:
Q  250 ttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||||| |  |||||||||| |||||||||||||| |||  ||| |||||||||||||| ||||    
T  45044638 ttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacaca 45044566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 43256 - 43309
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||||||||||||||| ||||||   |||||||||| ||||||||||||    
T  43256 ctaatgcatggggtgtacaagagtgtataagaataaagggtatctatgtatcat 43309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 228 - 293
Target Start/End: Complemental strand, 41608593 - 41608528
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 293  Q
    |||| |||||| ||||||| | ||||||||||||||| |  ||||||| |||||||||||||||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgaca 41608528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 50630582 - 50630635
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||| |||||||||||||||||||  |||||| |||||||||| |||||    
T  50630582 ctaatgcatagggtgtacaagggtgtatgagaataaatggtgtctatgcatcat 50630635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 49811629 - 49811533
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||| |||||| ||| ||| | ||||||| ||||||| |  |||||| ||||||||||||||||||||||  ||  | ||| |||||||||||||    
T  49811629 aagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcaca 49811533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 23597193 - 23597123
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaataca-tctattgacacccacacaaaaatctgacacgt 296  Q
    ||||||||||||| ||| ||| | ||||||||||||||| ||| |||| ||||||| |||||||||||||||    
T  23597193 aagagtaatgatacatagacatcattaggtggcaatacactct-ttgatacccacataaaaatctgacacgt 23597123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 48489343 - 48489394
Alignment:
Q  271 gacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||| |||||||||||||||||| ||  ||||||||| ||||||||||||||    
T  48489343 gacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcaca 48489394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 322
Target Start/End: Complemental strand, 44334230 - 44334176
Alignment:
Q  268 attgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||| ||||||||||| |||||||||| |||| ||||||| |||||| ||||    
T  44334230 attgacatccacacaaaaacctgacacgtagtcacatggacccagcacaaacaca 44334176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 2582039 - 2582092
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||| |||| |||||||||||||||||   |||||||||||| ||||||||||    
T  2582039 ctaatacatgaggtgtacaagggtgtattagaataaagggtgtttatgtatcat 2582092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 5958976 - 5958927
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||| ||||||||||||||||||||||| || ||||  |||||||||||    
T  5958976 ctaatacatggggtgtacaagggtgtatgcaattaaaatgtgtctatgta 5958927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 401
Target Start/End: Original strand, 47748566 - 47748615
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||| ||||||||||||||| ||||||| || |||| ||||||||||||    
T  47748566 ctaatacatggggtgtacaagagtgtatgcaattaaaaggtgtctatgta 47748615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 49811503 - 49811454
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||| ||| |||| |||||||||||||  |||||||||||||||||||    
T  49811503 ctaatgtatgtggtgcacaagggtgtatgagaataaagggtgtctatgta 49811454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 50590976 - 50590927
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||| ||||||||||||||||||||||| || |||| ||| ||||||||    
T  50590976 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtatctatgta 50590927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 6e-32; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 504221 - 504127
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| ||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 504127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 14547920 - 14548016
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||| |||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14547920 aagagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 14548016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 37038478 - 37038573
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||| ||| ||| ||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 37038573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 12831047 - 12831141
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| ||||||| ||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 12831141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 15197333 - 15197427
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||  ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 15197427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 23122697 - 23122603
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| ||| ||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 23122603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 34012396 - 34012302
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| |||||||| |||||| |  ||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcaca 34012302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 40424043 - 40423949
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| | ||| ||||||||||||||| |  |||||| |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  40424043 gagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 40423949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 1180040 - 1179946
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| |||||||| |||||| |  ||||||||||||||||||||||||||||| ||| |||||  |||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcaca 1179946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 44507188 - 44507095
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaataca-tctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagca 320  Q
    |||||||||||| ||| ||||| |||||||| |||||| ||| || |||||||||||||||||||||||||| |||||||||||||| |||||||    
T  44507188 agagtaatgatacatagacacccttaggtggtaatacactct-ttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagca 44507095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 322
Target Start/End: Original strand, 5957831 - 5957924
Alignment:
Q  229 agtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||| ||| |||   ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  5957831 agtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcaca 5957924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 10284733 - 10284637
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaataca-tctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||| |||||| ||| ||||| ||| ||| ||||||| ||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  10284733 aagagttatgatacatagacacccttaagtgacaatacactct-ttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcaca 10284637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 226 - 291
Target Start/End: Original strand, 24307627 - 24307692
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctga 291  Q
    |||||| |||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  24307627 aagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 8841510 - 8841438
Alignment:
Q  250 ttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||| |||| |  ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  8841510 ttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 8841438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 34307210 - 34307281
Alignment:
Q  222 ttagaagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 293  Q
    |||||||||| |||||| ||||||||| ||||||||||||||| |  |||||||||||||||||||||||||    
T  34307210 ttagaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 34307281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 504097 - 504044
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  504097 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcat 504044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 14548046 - 14548099
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  14548046 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcat 14548099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 23122573 - 23122520
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  23122573 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcat 23122520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 226 - 291
Target Start/End: Complemental strand, 24307895 - 24307830
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctga 291  Q
    |||||| |||||| ||||||||| |||||||||||||||||  |||||||||||||||||||||||    
T  24307895 aagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctga 24307830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 42221512 - 42221609
Alignment:
Q  225 gaagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||||| ||| ||| | ||||||| ||||||||   | |||||||||||||||||||||||||||||||  ||||||||  |||||||||    
T  42221512 gaagagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcaca 42221609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 318
Target Start/End: Original strand, 16383375 - 16383467
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    |||||| |||||| ||||||||| ||||||||||||||| |  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  16383375 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 16383467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 15048281 - 15048188
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||| |||||| ||| ||| | ||||||||||||||| |  |||||||| ||||||||||||||||||||  ||| |||||||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgacacc-acacaaaaatctgacacgtagccacatggaccccgcacaagcaca 15048188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 12831171 - 12831224
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  12831171 ctaatgcatggggtgtacaagggtgtatgagaataaatggtgtctatgtatcat 12831224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 34012272 - 34012219
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  34012272 ctaatgcatggggtgtacaagggtgtacgagaataaagggtgtctatgtatcat 34012219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 42710270 - 42710217
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  42710270 ctaatgtatggggtgtacaagggtgtatgggaataaagggtgtctgtgtatcat 42710217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 43414557 - 43414508
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  43414557 ctaatgtatggggtgtacaagggtgtatggcaataaagggtgtctatgta 43414508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 9122229 - 9122279
Alignment:
Q  272 acacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||||||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcaca 9122279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 32032724 - 32032789
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 293  Q
    ||||| |||||| ||||||||| |||||||||||||||||  |||||| ||||||||||||||||||    
T  32032724 agagttatgatacataaacacccttaggtggcaatacatc-cttgacatccacacaaaaatctgaca 32032789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 9122309 - 9122362
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||||||||||||||| |||||||| |||||||  ||||||||||||||    
T  9122309 ctaatgcatggggtgtacaagagtgtatgggaataaagaatgtctatgtatcat 9122362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 233 - 322
Target Start/End: Complemental strand, 10621182 - 10621093
Alignment:
Q  233 atgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||| ||| ||| | |||||||| |||||| |  |||||||||||||||||||||||||||||  ||| | || ||||||||||||||    
T  10621182 atgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcaca 10621093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 401
Target Start/End: Original strand, 37038607 - 37038652
Alignment:
Q  356 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||    
T  37038607 tgcatggggtgtacaagggtgtatagaaataaagggtgtttatgta 37038652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 40423919 - 40423866
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||| |||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  40423919 ctaatacatgaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcat 40423866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 16056503 - 16056411
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    |||||| |||||| ||||||| | ||| ||| |||||||||  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  16056503 aagagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 16056411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 405
Target Start/End: Original strand, 15197459 - 15197510
Alignment:
Q  354 aatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||| ||||||||||||||||||| ||||||  |||||||||||||||    
T  15197459 aatgcatgaggtgtacaagggtgtatgggaataaaaagtgtctatgtatcat 15197510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 43414681 - 43414587
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||| |||||| ||| ||| | |||| |||||| ||| |  ||||||||||||||||||||| ||||||  |||| |||| ||||||||||||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcaca 43414587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 1179916 - 1179863
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||| | ||||| |||||||| ||||||| ||||||    
T  1179916 ctaatgcatggggtgtacaaggatatatgggaataaaggatgtctatctatcat 1179863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 16056377 - 16056328
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||| ||||||||||||||||||||||| || |||| ||||||||||||    
T  16056377 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 16056328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 24307769 - 24307720
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||| ||||||||||||||||||||||| || |||| ||||||||||||    
T  24307769 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 24307720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 228 - 293
Target Start/End: Complemental strand, 30479574 - 30479509
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 293  Q
    |||| |||||| ||||||||| ||||||||||||||| |  |||||| ||||| ||||||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgaca 30479509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 32707979 - 32707930
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||| ||||||||||||||||||||||| || |||| ||||||||||||    
T  32707979 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 32707930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 15259007 - 15258935
Alignment:
Q  250 ttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||| ||||||||||||  | |||| ||||| |||||||||||| ||  |||||||||||| |||||||||||    
T  15259007 ttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcaca 15258935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 398
Target Start/End: Complemental strand, 15048157 - 15048111
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctat 398  Q
    |||||| ||||| ||||||||||||||| | ||||||||||||||||    
T  15048157 ctaatgtatgggatgtacaagggtgtatcggaataaagggtgtctat 15048111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 317
Target Start/End: Original strand, 17443824 - 17443914
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaa 317  Q
    ||||| |||||| ||| ||| | ||||||| |||||||  | || |||| ||||||||||||||||| ||| ||| ||||||||| |||||    
T  17443824 agagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaa 17443914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 401
Target Start/End: Original strand, 34307347 - 34307389
Alignment:
Q  359 atggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||||||||||||||||||| || |||| ||||||||||||    
T  34307347 atggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 34307389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 401
Target Start/End: Original strand, 5957958 - 5958003
Alignment:
Q  356 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||| ||||||||||||||||||  |||||||||||| ||||||    
T  5957958 tgcatgaggtgtacaagggtgtatgagaataaagggtgtttatgta 5958003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 401
Target Start/End: Complemental strand, 8841404 - 8841359
Alignment:
Q  356 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||||||||||||||| |||||||  |||||| ||||||||||||    
T  8841404 tgcatggggtgtacaagagtgtatgagaataaatggtgtctatgta 8841359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 20075034 - 20074966
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaataca-tctattgacacccacacaaaaatctgacacgt 296  Q
    ||||||||||| ||| ||| | ||||||||||||||| ||| |||||||||||| |||||| ||||||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactct-ttgacacccacataaaaatgtgacacgt 20074966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 30479450 - 30479401
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||| |||| |||||||||||||||||| || |||| ||||||||||||    
T  30479450 ctaatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgta 30479401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 401
Target Start/End: Original strand, 32032848 - 32032897
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||| |||| |||||||||||||||||| || |||| ||||||||||||    
T  32032848 ctaatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgta 32032897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 401
Target Start/End: Complemental strand, 42354560 - 42354515
Alignment:
Q  356 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||||||||||| |||||||||||  |||||| ||||||||||||    
T  42354560 tgcatggggtgtagaagggtgtatgagaataaatggtgtctatgta 42354515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 44507063 - 44507011
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||||||||||  ||||||   ||||||||||||||    
T  44507063 ctaatgcatggggtgtacaagggtgtatgagaataaa-tatgtctatgtatcat 44507011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 4854965 - 4854869
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| ||| ||| | ||||||||||||||| |  || ||||| ||| |||||||||| | ||   ||| ||||||| |||||||||||    
T  4854965 aagagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcaca 4854869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 401
Target Start/End: Complemental strand, 15258892 - 15258856
Alignment:
Q  365 tgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||||  ||||||||||||||||||||||||||||    
T  15258892 tgtacaaaagtgtatggaaataaagggtgtctatgta 15258856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 6e-32; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 19329842 - 19329936
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||| | ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 19329936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 231 - 322
Target Start/End: Original strand, 3783998 - 3784089
Alignment:
Q  231 taatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||| ||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 3784089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 36362014 - 36361919
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||| ||| ||||| |||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 36361919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 7389387 - 7389483
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaataca-tctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| ||| ||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7389387 aagagtaatgatacatagacacccttaggtggcaatacactct-ttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 7389483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 36362025 - 36362120
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||| ||| ||||| |||||||| ||||||||  ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 36362120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 8080485 - 8080389
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| ||| ||||| ||||||||||||||| |  |||||||| ||| |||||||||||||||| ||||||||||||||||||||||||    
T  8080485 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 8080389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 4999614 - 4999520
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| |||| |||||||||| || ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacaca 4999520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 35137533 - 35137627
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacaca 35137627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 38267040 - 38267134
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| ||| ||| ||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38267134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 19436289 - 19436193
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| ||| ||| | ||||||| ||||||| || ||||||||||||||||||||||||||||| ||||||||| |||||| |||||||    
T  19436289 aagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcaca 19436193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 38837215 - 38837311
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| ||| ||||| ||||||||||||||| |  |  ||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  38837215 aagagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38837311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 3434561 - 3434656
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||| ||| ||| | ||||||||||||||| |  |||||||||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcaca 3434656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 231 - 322
Target Start/End: Original strand, 3694370 - 3694461
Alignment:
Q  231 taatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||| ||||| ||||||| ||||||| || || |||||||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  3694370 taatgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcaca 3694461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 19329966 - 19330019
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19329966 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcat 19330019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 38837341 - 38837394
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38837341 ctaatgcatgggatgtacaagggtgtatggaaataaagggtgtctatgtatcat 38837394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 40957705 - 40957801
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaataca-tctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| ||| ||||  ||||||||||||||| ||| |||| |||||||||||||||||||||||| ||||||||| |||| |||||||||    
T  40957705 aagagtaatgatacatagacactcttaggtggcaatacactct-ttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcaca 40957801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 36208171 - 36208267
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||| |||||| ||| ||||| |||||||| |||||||  ||||||||||||||||||| |||||| ||  |||||||||||| |||||||||||    
T  36208171 aagagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcaca 36208267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 227 - 318
Target Start/End: Original strand, 22343360 - 22343451
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    ||||| |||||| ||||||||| ||||||||||||||| |  ||||||||||||||||||||||||| || | ||  |||||||||||||||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaag 22343451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 3434676 - 3434729
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  3434676 ctaatgcatggggtgtacaaggctgtatgggaataaagggtgtctatgtatcat 3434729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 356 - 405
Target Start/End: Complemental strand, 8080355 - 8080306
Alignment:
Q  356 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8080355 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcat 8080306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 229 - 322
Target Start/End: Complemental strand, 32951592 - 32951499
Alignment:
Q  229 agtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||| ||| ||||  |||| || |||||||||  || ||| |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 32951499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 225 - 318
Target Start/End: Original strand, 38044194 - 38044287
Alignment:
Q  225 gaagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    ||||||| |||||| ||||||||| ||||||||||||||| |  |||||| |||||||||||||||||| |||  ||  |||||||||||||||    
T  38044194 gaagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaag 38044287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 40957831 - 40957884
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  40957831 ctaatgcatggggtgtacaagggtgtatgaaaataatgggtgtctatgtatcat 40957884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 228 - 318
Target Start/End: Original strand, 8238212 - 8238303
Alignment:
Q  228 gagtaatgatatataaacacctt-taggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    |||| |||||| ||||||||| | |||||||||||||| |  ||||||||||||||||||||||||| ||| |||  |||||||||||||||    
T  8238212 gagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaag 8238303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 4999490 - 4999437
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  4999490 ctaatgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcat 4999437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 226 - 294
Target Start/End: Complemental strand, 10343665 - 10343597
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacac 294  Q
    ||||||||||||| ||| ||||| |||||||| ||||||  | ||||||||||||||||||||||||||    
T  10343665 aagagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 409 - 460
Target Start/End: Original strand, 26042297 - 26042348
Alignment:
Q  409 gtttggttgggaggtgttccgtatatatgcggcgctggttgtattactcttt 460  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| ||||||    
T  26042297 gtttggttggtaggtgttccgtatatatgcggcgccggttgtattgctcttt 26042348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 318
Target Start/End: Original strand, 41915740 - 41915831
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    ||||| |||||| ||||||||| ||||||||||||||| |  |||||||| |||||||||||||||| ||   ||  |||||||||||||||    
T  41915740 agagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaag 41915831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 46374902 - 46374808
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||| |||||| ||| ||| | ||||||||||| ||| |  || |||||||||||||||||||||||||   ||| |||||||||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 2318217 - 2318168
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||    
T  2318217 ctaatgcatggagtgtacaaaggtgtatggaaataaagtgtgtctatgta 2318168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 11044302 - 11044355
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||| ||||||||| |||||||| |||||||| |||||||||||||||    
T  11044302 ctaatgcatgaggtgtacaaaggtgtatgaaaataaagagtgtctatgtatcat 11044355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 19436163 - 19436114
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||||||    
T  19436163 ctaatgcatggggtgtacaagggtgtatgagaataaatggtgtctatgta 19436114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 32951469 - 32951416
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||| |||||||||||||||||||||||  ||||| |||||||||||||||||    
T  32951469 ctaatacatggggtgtacaagggtgtatgagaataaggggtgtctatgtatcat 32951416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 36362138 - 36362191
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||| |||||| ||||||||||||||||  |||||||||||||||||||||||    
T  36362138 ctaatacatgggatgtacaagggtgtatgagaataaagggtgtctatgtatcat 36362191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 46374800 - 46374751
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||| ||||||||||||||||||||||| |||||| ||||||||||||    
T  46374800 ctaatgtatggggtgtacaagggtgtatgggaataaatggtgtctatgta 46374751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 318
Target Start/End: Original strand, 7727904 - 7727996
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    |||||| |||||| ||||||||| |||||||| |||||| || ||||||  |||| |||||||||||| ||  |||  |||||||||||||||    
T  7727904 aagagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaag 7727996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 18207178 - 18207273
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||| |||||| ||| ||| | ||||||||||||||| || |||||||||| |||||||||| ||||||   |||||| ||||| ||||||||||    
T  18207178 aagagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgt-ggcacgtgaaccccacacaagcaca 18207273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 301
Target Start/End: Original strand, 45223040 - 45223115
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattg-acacccacacaaaaatctgacacgtaatca 301  Q
    ||||||||||||||||| ||| | |||||||||||||||| | ||| ||| | ||||||||||||||||||||||||    
T  45223040 aagagtaatgatatatatacatccttaggtggcaatacat-tcttgaacatctacacaaaaatctgacacgtaatca 45223115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 21234401 - 21234495
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||| |||||| ||| ||| | ||||||| ||||||| |  ||||||| ||||||||||| |||||||||  ||| || ||||||||||||||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcaca 21234495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 7389513 - 7389565
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||| ||||||||||||| |||||||||| |||||||| ||||||||||||||    
T  7389513 ctaatacatggggtgtaca-gggtgtatgggaataaaggatgtctatgtatcat 7389565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 226 - 318
Target Start/End: Original strand, 11044186 - 11044268
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    ||||||||||||| ||| ||||| |||||||||||||||||  |||||||||          |||||||||| ||||||||||||||||||||    
T  11044186 aagagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc----------ctgacacgtagtcacgtggaccccgcacaag 11044268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 228 - 293
Target Start/End: Complemental strand, 32564526 - 32564461
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 293  Q
    |||| |||||| |||||||   ||||||||||||||| |  |||||||||||||||||||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgaca 32564461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 401
Target Start/End: Original strand, 35523000 - 35523049
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||| ||||||||||||||||||||||| |||||| ||||| ||||||    
T  35523000 ctaatgtatggggtgtacaagggtgtatgggaataaatggtgtttatgta 35523049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 36361901 - 36361848
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||| |||||  ||||||||||||||||  |||||||||||||||||||||||    
T  36361901 ctaatacatggaatgtacaagggtgtatgagaataaagggtgtctatgtatcat 36361848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 401
Target Start/End: Original strand, 38044321 - 38044370
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||| ||||||||||||||||||||||| || |||| ||||||||||||    
T  38044321 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 38044370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 228 - 317
Target Start/End: Complemental strand, 40846213 - 40846124
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaa 317  Q
    |||| |||||| ||||||| | ||||||||||||||| |  |||||| |||||||||||||| ||| ||| | |  ||||||||||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaa 40846124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 46033777 - 46033728
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||| ||||||||||||||||||||||  |||||| ||||||||||||    
T  46033777 ctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgta 46033728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 401
Target Start/End: Original strand, 12311041 - 12311077
Alignment:
Q  365 tgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||||| |||||||||||||||||||||||||||||    
T  12311041 tgtacaaaggtgtatggaaataaagggtgtctatgta 12311077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 16374894 - 16374830
Alignment:
Q  258 caatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||  |||||| |||||||||||||||||||||  ||||||||| | | ||||||||||    
T  16374894 caatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcaca 16374830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 35468957 - 35468861
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| ||| ||| | |||| ||||||||||||  |||||||||||| |||||||| | | || | || |||||||| |||||| ||||    
T  35468957 aagagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacaca 35468861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 310
Target Start/End: Complemental strand, 2318320 - 2318261
Alignment:
Q  251 taggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccc 310  Q
    |||||||||| ||| || ||||||||||||||||||||||||  ||  ||||||||||||    
T  2318320 taggtggcaagacacctcttgacacccacacaaaaatctgacgtgtggtcacgtggaccc 2318261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 398
Target Start/End: Original strand, 31736001 - 31736047
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctat 398  Q
    |||||| ||||||||||||||||||||||| |||||| ||| |||||    
T  31736001 ctaatgtatggggtgtacaagggtgtatgggaataaaaggtatctat 31736047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 401
Target Start/End: Original strand, 41915872 - 41915914
Alignment:
Q  359 atggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||||||||||||||||||| || |||| ||||||||||||    
T  41915872 atggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 41915914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 320
Target Start/End: Complemental strand, 46033879 - 46033809
Alignment:
Q  250 ttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagca 320  Q
    ||||||||||||||| |  || ||||||||| |||||||||||||||  |||| || || |||||||||||    
T  46033879 ttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagca 46033809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 401
Target Start/End: Original strand, 8238337 - 8238386
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||| ||||||||||||||||||||||| || |||| || |||||||||    
T  8238337 ctaatacatggggtgtacaagggtgtatgcaattaaaaggcgtctatgta 8238386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 16374800 - 16374751
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||| |||| |||||||| ||||||||  |||||||||||||||||||    
T  16374800 ctaatgtatggagtgtacaaaggtgtatgagaataaagggtgtctatgta 16374751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 401
Target Start/End: Original strand, 21234525 - 21234574
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||| ||||||||||||| ||||||||  |||||| ||||||||||||    
T  21234525 ctaatgtatggggtgtacaatggtgtatgagaataaaaggtgtctatgta 21234574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 401
Target Start/End: Original strand, 22343485 - 22343534
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||| |||| |||||||||||||||||| || |||| ||||||||||||    
T  22343485 ctaatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgta 22343534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 322
Target Start/End: Original strand, 35522881 - 35522970
Alignment:
Q  233 atgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||| ||| ||| | ||| ||||||||||| |  || |||||||||||||||||||||||||   ||  |||| ||||||||||||||    
T  35522881 atgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcaca 35522970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 38267164 - 38267217
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||| ||||| | |||||||||||||||| | | ||||||||||||    
T  38267164 ctaatgcatgggatgtacgaaggtgtatggaaataaatgatatctatgtatcat 38267217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 401
Target Start/End: Original strand, 41423810 - 41423855
Alignment:
Q  356 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||||||||||||| ||||||||  |||||||||||| ||||||    
T  41423810 tgcatggggtgtacaaaggtgtatgagaataaagggtgtttatgta 41423855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 397
Target Start/End: Original strand, 26296769 - 26296813
Alignment:
Q  353 taatgcatggggtgtacaagggtgtatggaaataaagggtgtcta 397  Q
    ||||| ||| |||||||||||||||||||||||| | ||||||||    
T  26296769 taatgtatgaggtgtacaagggtgtatggaaatatatggtgtcta 26296813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 401
Target Start/End: Complemental strand, 39255887 - 39255851
Alignment:
Q  365 tgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||||||||||||||  |||||||||||||||||||    
T  39255887 tgtacaagggtgtatgataataaagggtgtctatgta 39255851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 39256023 - 39255955
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgt 296  Q
    |||| |||||| ||| ||| | ||||||||||||||| |  |||| ||||| |||||||||||||||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgt 39255955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 6e-32; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 17598554 - 17598648
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcaca 17598648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 32869678 - 32869772
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||| |||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32869678 gagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 32869772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 231 - 322
Target Start/End: Complemental strand, 22880755 - 22880664
Alignment:
Q  231 taatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcaca 22880664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 11427615 - 11427712
Alignment:
Q  227 agagtaatgatatataaacacctt--taggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||| ||| ||||| |  ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  11427615 agagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 11427712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 221 - 322
Target Start/End: Complemental strand, 23128234 - 23128133
Alignment:
Q  221 tttagaagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagca 320  Q
    |||| |||| |||||||||||| ||||||||| |||  ||||||||  ||||||||||||||||||||||||||||| ||||||||| ||| ||||||||    
T  23128234 tttaaaagaataatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagca 23128135  T
Q  321 ca 322  Q
    ||    
T  23128134 ca 23128133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 29857827 - 29857921
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| |||||||||| |||||||||| || || |||||||||||||||||||||||||| | ||||||| |||||| |||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 29857921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 6209567 - 6209471
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctatt-gacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| ||| ||||| ||||||||||||||| ||||| ||||| |||||||||||||| |||||| ||||||||||||||||| ||||||    
T  6209567 aagagtaatgatacatagacacccttaggtggcaataca-ctatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcaca 6209471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 226 - 317
Target Start/End: Original strand, 15832575 - 15832666
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaa 317  Q
    ||||||||||||| ||| ||||||||||||| ||||| |||  ||||||||||||||||||| ||||||||| ||||||||| || ||||||    
T  15832575 aagagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaa 15832666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 17598678 - 17598731
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17598678 ctaatgcatggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcat 17598731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 314
Target Start/End: Complemental strand, 31109500 - 31109414
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgca 314  Q
    ||||||||||  ||| ||||| ||||||||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||||||    
T  31109500 gagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgca 31109414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 11427742 - 11427795
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  11427742 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcat 11427795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 29857951 - 29858004
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  29857951 ctaatgcatggggtgtacaagggtgtatgggaataaatggtgtctatgtatcat 29858004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 32869802 - 32869855
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  32869802 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcat 32869855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 15990144 - 15990052
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    |||||| |||||| ||||||||| ||||||||||||||| |  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  15990144 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 15990052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 30341462 - 30341370
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    |||||| |||||| ||||||||| ||||||||||||||| |  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  30341462 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 30341370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 232 - 322
Target Start/End: Complemental strand, 28536582 - 28536494
Alignment:
Q  232 aatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||| ||||||| | ||||||||||||||| |  |||||||||||||||||||||||||||   ||| ||||||||| ||||||||||    
T  28536582 aatgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacacg--gtcatgtggaccccacacaagcaca 28536494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 228 - 318
Target Start/End: Complemental strand, 15508124 - 15508034
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    |||| |||||| ||||||||| ||||||||||||||| |  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 15508034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 15832701 - 15832754
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| |||||||    
T  15832701 ctaatgcatggggtgtacaagggtgtattggaataaagggtgtctacgtatcat 15832754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 31976247 - 31976342
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||| |||||| ||| ||| | ||||||||||||| | |  || |||||||||||||||||||||||||  |||| || ||||||||||||||||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcaca 31976342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 22880634 - 22880581
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||| |||||||||||||||||||||||| |||||| ||||| ||||||||||    
T  22880634 ctaatacatggggtgtacaagggtgtatgggaataaatggtgtatatgtatcat 22880581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 31110737 - 31110688
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||| ||||||||||||| |||||||||||||||||| ||||||||||    
T  31110737 ctaatgtatggggtgtacaaaggtgtatggaaataaaggatgtctatgta 31110688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 31110861 - 31110767
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||| |||||| ||| ||| | ||||||||||||||| |  ||||||| ||||  |||||||||||||||| ||| ||||||| |||||||||||    
T  31110861 aagagttatgatacatagacatccttaggtggcaatacaccctttgacactcaca--aaaatctgacacgtaaccacatggaccctgcacaagcaca 31110767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 318
Target Start/End: Original strand, 4231560 - 4231638
Alignment:
Q  240 ataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    ||||||| | ||||||||||||||| |  ||| ||||||||||||||||||||||||   ||  |||||||||||||||    
T  4231560 ataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaag 4231638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 23128103 - 23128049
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaat-aaagggtgtctatgtatcat 405  Q
    |||||||||||| ||||||||||||||||||||| ||||| | ||||||||||||    
T  23128103 ctaatgcatgggatgtacaagggtgtatggaaataaaaggttctctatgtatcat 23128049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 31953130 - 31953036
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||| | ||||||||||||||| |  |||||||||||| |||||||||||| ||  ||| ||||||| | ||||| ||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacaca 31953036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 401
Target Start/End: Original strand, 4231672 - 4231721
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||| ||||||||||||||||||||||| || |||| ||||||||||||    
T  4231672 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 4231721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 401
Target Start/End: Original strand, 31976372 - 31976421
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||| ||||||||||||||||||||||  |||||| ||||||||||||    
T  31976372 ctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgta 31976421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 12732480 - 12732550
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgt 296  Q
    ||||||||||||| ||| |||   ||| ||||||||| |   |||||||||||||||||||||||||||||    
T  12732480 aagagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgt 12732550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 401
Target Start/End: Complemental strand, 15990011 - 15989969
Alignment:
Q  359 atggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||||||||||||||||||| || |||| ||||||||||||    
T  15990011 atggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 15989969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 293
Target Start/End: Complemental strand, 22422119 - 22422053
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 293  Q
    |||||||||||| ||| ||| | ||||||||||||| |||| ||||||| || |||||| |||||||    
T  22422119 agagtaatgatacatagacatccttaggtggcaatagatctcttgacactcatacaaaattctgaca 22422053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 401
Target Start/End: Complemental strand, 30341329 - 30341287
Alignment:
Q  359 atggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||||||||||||||||||| || |||| ||||||||||||    
T  30341329 atggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 30341287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 401
Target Start/End: Complemental strand, 28536460 - 28536415
Alignment:
Q  356 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||||||||||||||||||||||| ||||||| | |||| |||||    
T  28536460 tgcatggggtgtacaagggtgtatgaaaataaatgatgtcgatgta 28536415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 362 - 398
Target Start/End: Original strand, 30870148 - 30870184
Alignment:
Q  362 gggtgtacaagggtgtatggaaataaagggtgtctat 398  Q
    |||||||||| |||||||| |||||||||||||||||    
T  30870148 gggtgtacaaaggtgtatgaaaataaagggtgtctat 30870184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 9e-31; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 13811650 - 13811746
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||| |||| ||| ||||| |||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13811650 aagagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 13811746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 18520986 - 18520890
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||| |||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18520986 aagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 18520890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 224 - 322
Target Start/End: Complemental strand, 36733046 - 36732948
Alignment:
Q  224 agaagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||||| ||| ||||| |||||| |||||||| |  |||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  36733046 agaagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcaca 36732948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 2740273 - 2740368
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||| ||| ||| | ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 2740368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 35785199 - 35785293
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| ||||||||||||||| || ||||||||||||||||||||||||||||| | ||||||| ||||||||| ||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcaca 35785293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 40145407 - 40145501
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| ||||||||||||||| |  || ||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 40145501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 42414402 - 42414308
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| |||||  |||||||||||||| |  ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 42414308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 6679697 - 6679792
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||| |||||| ||| ||| ||||||||||||||||| || ||||||||||||||||||||||||||||  |||| |||||||||||||| ||||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacaca 6679792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 14831814 - 14831908
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||  ||||||||||||||| |  |||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 14831908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 33149738 - 33149644
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| |||||||| |||||| |  ||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcaca 33149644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 35943992 - 35943898
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||| |||||| ||| ||||| |||||||||||||||||  ||||||||||||||||||||||||||||| | ||||||| ||| ||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcaca 35943898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 35785323 - 35785376
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35785323 ctaatgcatggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcat 35785376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 15409712 - 15409616
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||| |||||| ||| ||| | ||||||| ||||||||   |||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  15409712 aagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcaca 15409616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 31008986 - 31009082
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||| |||||| ||||||| | ||||||| ||||||||   |  |||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  31008986 aagagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 31009082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 28177775 - 28177869
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||| |||||| ||| ||| | ||||||||||||||| |  ||||||||||||||||||||||||||||  |||| |||||||||||||| ||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacaca 28177869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 2740398 - 2740451
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  2740398 ctaatgcatgggatgtacaagggtgtatgggaataaagggtgtctatgtatcat 2740451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 14831938 - 14831991
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  14831938 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcat 14831991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 229 - 322
Target Start/End: Original strand, 16327902 - 16327995
Alignment:
Q  229 agtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||| ||||| | | ||||||||||||||||| ||||||||||||| |||||||||||||||  ||| ||| ||| | ||||||||||    
T  16327902 agtaatgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcaca 16327995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 18520860 - 18520807
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  18520860 ctaatgcatgaggtgtacaagggtgtatgaaaataaagggtgtctatgtatcat 18520807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 3921367 - 3921275
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    |||||| |||||| ||||||||| ||||||||||||||| |  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  3921367 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 3921275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 319
Target Start/End: Complemental strand, 41470517 - 41470425
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagc 319  Q
    |||||||| ||| ||| |||||||||||||||||||||||  || | |  || | |||||||||||||||| |||||||||||||||||||||    
T  41470517 agagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 31132458 - 31132511
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||| |||||||||||||||||| ||||||||||||| ||||||||||    
T  31132458 ctaatgcatgaggtgtacaagggtgtatgaaaataaagggtgtttatgtatcat 31132511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 33149614 - 33149561
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  33149614 ctaatgcatggggtgtacaagggtgtacgagaataaagggtgtctatgtatcat 33149561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 291
Target Start/End: Complemental strand, 39688999 - 39688934
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctga 291  Q
    |||||| |||||| ||||||||| ||| |||||||||||||  |||||||||||||||||||||||    
T  39688999 aagagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctga 39688934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 318
Target Start/End: Complemental strand, 2252269 - 2252178
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    ||||| |||||| ||||||| | ||||||||||||||| |  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 2252178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 398
Target Start/End: Complemental strand, 36732918 - 36732872
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctat 398  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||    
T  36732918 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctat 36732872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 401
Target Start/End: Complemental strand, 35943864 - 35943819
Alignment:
Q  356 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||||||||||||||||||||||||||||||  |||||||||||    
T  35943864 tgcatggggtgtacaagggtgtatggaaataaaatgtgtctatgta 35943819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 276 - 320
Target Start/End: Original strand, 31132392 - 31132436
Alignment:
Q  276 ccacacaaaaatctgacacgtaatcacgtggaccccgcacaagca 320  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||    
T  31132392 ccacacaaaaatctgacaagtagtcacgtggaccccgcacaagca 31132436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 402
Target Start/End: Original strand, 13811776 - 13811826
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtat 402  Q
    |||||||||||| ||||||||| ||||||| |||||| |||||||||||||    
T  13811776 ctaatgcatgggatgtacaaggatgtatgggaataaatggtgtctatgtat 13811826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 20073616 - 20073522
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||||| ||| | |||| || ||||||| |  ||||||| |||| ||||||||  ||||| | ||||||||||| |||||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcaca 20073522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 287
Target Start/End: Complemental strand, 36875702 - 36875644
Alignment:
Q  229 agtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaat 287  Q
    |||||||||| ||| ||||| ||||||||||||||| |  |||||||||||||||||||    
T  36875702 agtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaat 36875644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 15409586 - 15409537
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||| ||||||||||||||||||||||  |||||||||||| ||||||    
T  15409586 ctaatgtatggggtgtacaagggtgtatgcgaataaagggtgtttatgta 15409537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 356 - 401
Target Start/End: Original strand, 31009116 - 31009161
Alignment:
Q  356 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||||||||||||| ||||||||  |||||||||||||||||||    
T  31009116 tgcatggggtgtacaaaggtgtatgagaataaagggtgtctatgta 31009161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 40145531 - 40145584
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||| | ||||||||||||| ||||  |||||||||||||||||||||||    
T  40145531 ctaatgcacgaggtgtacaagggtatatgagaataaagggtgtctatgtatcat 40145584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 39557594 - 39557534
Alignment:
Q  251 taggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggacccc 311  Q
    ||||||| |||||| || || ||| ||||||||||||||||||||| ||||| ||||||||    
T  39557594 taggtggtaatacacctcttaacatccacacaaaaatctgacacgtgatcacatggacccc 39557534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 291
Target Start/End: Original strand, 10356639 - 10356698
Alignment:
Q  233 atgatatataaacacctttaggtggcaatacatct-attgacacccacacaaaaatctga 291  Q
    |||||| ||| ||| | |||||||||||||||||  ||||||||||||||||||||||||    
T  10356639 atgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 401
Target Start/End: Complemental strand, 2252137 - 2252095
Alignment:
Q  359 atggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||||||||||||||||||| || |||| ||||||||||||    
T  2252137 atggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 2252095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 401
Target Start/End: Complemental strand, 3921234 - 3921192
Alignment:
Q  359 atggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||||||||||||||||||| || |||| ||||||||||||    
T  3921234 atggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 3921192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 21370048 - 21370098
Alignment:
Q  272 acacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||| ||||||||||||| ||  ||||||||||||||||||| ||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacaca 21370098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 26720516 - 26720610
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||| |||||| ||| ||| | ||||||||||||||| |  || ||||| ||| |||||||||||||||   ||| |||| ||||||||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcaca 26720610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 26990265 - 26990359
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||| |||||| ||| ||| | ||||||||||||||| |  || ||||| ||| |||||||||||||||   ||| |||| ||||||||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcaca 26990359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 405
Target Start/End: Complemental strand, 16115296 - 16115255
Alignment:
Q  364 gtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||| |||||||  |||||||||||||||||||||||    
T  16115296 gtgtacaagagtgtatgagaataaagggtgtctatgtatcat 16115255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 453
Target Start/End: Complemental strand, 40753091 - 40753051
Alignment:
Q  413 ggttgggaggtgttccgtatatatgcggcgctggttgtatt 453  Q
    ||||| |||||||||||||||| |||||||| |||||||||    
T  40753091 ggttgagaggtgttccgtatatttgcggcgccggttgtatt 40753051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 9e-31; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 10249484 - 10249388
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| ||| ||||| ||||||| ||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10249484 aagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 10249388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 32505749 - 32505654
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||| ||| ||||| ||||||| ||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 32505654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 13438343 - 13438437
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| ||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 13438437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 9058478 - 9058574
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  9058478 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 9058574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 33436202 - 33436106
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  33436202 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 33436106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 231 - 322
Target Start/End: Original strand, 28863458 - 28863549
Alignment:
Q  231 taatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28863458 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 28863549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 40701478 - 40701572
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| ||||||||||||||| || ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcaca 40701572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 7465836 - 7465741
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||| ||| ||||| |||| |||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 7465741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 17473020 - 17473114
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| |||| |||||||||| |  ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 17473114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 27864704 - 27864798
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| ||| ||||||||||| |  |||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcaca 27864798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 28381755 - 28381661
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| ||||||||||||||| || | ||||||||||||||||||||||||||| |||| ||||| |||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcaca 28381661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 224 - 322
Target Start/End: Original strand, 30915459 - 30915557
Alignment:
Q  224 agaagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||||| ||| ||||| ||||||||||||||| |  ||||| |||||| |||||||||||||||| |||||||||||||| |||||||||    
T  30915459 agaagagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcaca 30915557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 5574589 - 5574494
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||| ||| ||||  ||||||||||||||| |  |||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 5574494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 42257191 - 42257287
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||| |||||| ||| ||| |||||||||||||||||||  |||||||||||| |||||||||||||||   ||| |||||||||||||||||||    
T  42257191 aagagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcaca 42257287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 231 - 322
Target Start/End: Complemental strand, 19930917 - 19930826
Alignment:
Q  231 taatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||| ||| ||||| ||||||||||||||| |  |||||| |||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  19930917 taatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacaca 19930826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 4060685 - 4060779
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| ||||||| ||||||| || |||||| |||||||||||||||||||||| | ||||||| |||||| |||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 4060779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 20700813 - 20700909
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| ||| ||| | ||| ||||||||||| |  ||||| || |||||||||||||||||||| |||||||||||||||| |||||||    
T  20700813 aagagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 20700909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 40614002 - 40613908
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||| |||||| ||| ||| | ||||||||||||||| |  ||||||||||||||||||||||||||||   ||| |||||||||||||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 40613908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 5574476 - 5574423
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  5574476 ctaatgcatggcgtgtacaagggtgtatgggaataaagggtgtctatgtatcat 5574423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 7465711 - 7465658
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  7465711 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcat 7465658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 10249358 - 10249305
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  10249358 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcat 10249305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 13438467 - 13438520
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  13438467 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcat 13438520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 17473144 - 17473197
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  17473144 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcat 17473197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 28863579 - 28863632
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  28863579 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcat 28863632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 226 - 311
Target Start/End: Complemental strand, 38882915 - 38882831
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggacccc 311  Q
    ||||||||||||| ||| ||||| |||||||||||||   || |||||| |||||||||||||||||||||| |||||||||||||    
T  38882915 aagagtaatgatacatagacacccttaggtggcaataaccct-ttgacatccacacaaaaatctgacacgtagtcacgtggacccc 38882831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 40701602 - 40701655
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  40701602 ctaatgcatcgggtgtacaagggtgtatggaaataaaaggtgtctatgtatcat 40701655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 228 - 318
Target Start/End: Original strand, 38732354 - 38732444
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    |||| |||||| ||||||||| ||| ||| |||||||||  ||||||||||||||||||||||||| ||  |||  |||||||||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaag 38732444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 4060809 - 4060862
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||||||||||||||||||||||||||||||| | ||| ||||||||||    
T  4060809 ctaatgcatggggtgtacaagggtgtatggaaataaaagatgtttatgtatcat 4060862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 19930796 - 19930743
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  19930796 ctaatgcatgaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcat 19930743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 356 - 401
Target Start/End: Original strand, 20700943 - 20700988
Alignment:
Q  356 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  20700943 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgta 20700988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 30915587 - 30915640
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||| |||||||||||||||||||||||||||||| || ||||||||||||||    
T  30915587 ctaatacatggggtgtacaagggtgtatggaaataatggatgtctatgtatcat 30915640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 38882787 - 38882734
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  38882787 ctaatgcatggggtgtacaagggtgtatgggaataaatggtctctatgtatcat 38882734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 26891606 - 26891510
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||| |||||| |||  |||| ||||||||||||||| |  | ||||||||||||||||||||||| ||  ||||||||||| || |||||||||    
T  26891606 aagagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcaca 26891510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 32505623 - 32505571
Alignment:
Q  353 taatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  32505623 taatgcatggggtgtacaagggtgtatgagaataaagagtgtctatgtatcat 32505571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 353 - 401
Target Start/End: Complemental strand, 40613877 - 40613829
Alignment:
Q  353 taatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  40613877 taatgtatggggtgtacaagggtgtatgggaataaagggtgtctatgta 40613829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 45097837 - 45097745
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    |||||| |||||| ||||||| | |||||||||||||||||  |||||||||| |||||||||||||| ||   ||  |||||||||||||||    
T  45097837 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaag 45097745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 2533123 - 2533217
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||| |||||| ||| ||| | ||| |||||||||||||  |||||||| ||||||||||||||||||||  ||| | |||||||||||||||||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgacacc-acacaaaaatctgacacgtagccacatagaccccgcacaagcaca 2533217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 33436210 - 33436305
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||| ||| ||| | |||| |||||||||| || |||||||||||| ||||||||||||||| | || ||||||   |||||||||||    
T  33436210 agagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcaca 33436305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 244 - 322
Target Start/End: Original strand, 3439995 - 3440073
Alignment:
Q  244 acacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||| |||||||||||||||    | ||||||||||||||||||| ||| || || ||||||||||||||||||||||    
T  3439995 acacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcaca 3440073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 17820104 - 17820010
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||| |||||| ||| ||| || |||||||||||||| |  ||||||||||||||||||||||||| ||  | ||||||||||| ||||| ||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacaca 17820010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 359 - 405
Target Start/End: Complemental strand, 28381624 - 28381578
Alignment:
Q  359 atggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  28381624 atggggtgtacaaggatgtatgggaataaagggtgtctatgtatcat 28381578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 228 - 318
Target Start/End: Original strand, 43490121 - 43490211
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    |||| |||||| ||||||||| ||||||| ||||||| |  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 43490211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 401
Target Start/End: Original strand, 42257317 - 42257366
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||| |||||||||||||| |||||| |||||||||||||||||||||    
T  42257317 ctaatgtatggggtgtacaagagtgtatagaaataaagggtgtctatgta 42257366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 17823782 - 17823854
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaa 298  Q
    ||||||||||||| ||| ||| | ||||||||||||||||   |  |||||||||||||||||||||||||||    
T  17823782 aagagtaatgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgacacgtaa 17823854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 38273220 - 38273148
Alignment:
Q  250 ttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||| |||||||||| |  || ||||||||||||||||||||||||||  ||| |||||||||||| ||||||    
T  38273220 ttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcaca 38273148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 362 - 401
Target Start/End: Original strand, 3440113 - 3440152
Alignment:
Q  362 gggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  3440113 gggtgtacaaaggtgtatggaaataaagggtgtctatgta 3440152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 3737986 - 3738037
Alignment:
Q  271 gacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||||||||||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcaca 3738037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 401
Target Start/End: Original strand, 17823919 - 17823961
Alignment:
Q  359 atggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    
T  17823919 atggggtgtacaagggtgtatgtaaataaaggatgtctatgta 17823961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 9058604 - 9058657
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||||||||||||||| |||||||| |||||||||| | ||| ||||||    
T  9058604 ctaatgcatggggtgtacaagagtgtatgggaataaagggtatttatatatcat 9058657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 27864815 - 27864868
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||| |||||| ||||||||||||||||  ||||||||||||| |||||||||    
T  27864815 ctaatacatgggatgtacaagggtgtatgagaataaagggtgtcaatgtatcat 27864868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 33436076 - 33436023
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||| ||||||||||||||||||  |||||| |||||||||| |||||    
T  33436076 ctaatgcatgaggtgtacaagggtgtatgagaataaaaggtgtctatgcatcat 33436023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 394
Target Start/End: Original strand, 2533249 - 2533289
Alignment:
Q  354 aatgcatggggtgtacaagggtgtatggaaataaagggtgt 394  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  2533249 aatgtatggggtgtacaagggtgtatgggaataaagggtgt 2533289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 318
Target Start/End: Complemental strand, 2997565 - 2997497
Alignment:
Q  250 ttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    ||||||||||||||| |  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  2997565 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 2997497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 318
Target Start/End: Original strand, 13365349 - 13365443
Alignment:
Q  226 aagagtaatgatatataaacac--ctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    |||||| |||||| ||||||||  | |||| |||||||| | |  ||||||||||||||||||||||||| || | ||  |||||||||||||||    
T  13365349 aagagttatgatacataaacacacccttagatggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaag 13365443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 401
Target Start/End: Original strand, 13365477 - 13365526
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||| ||||||||||||||||||| ||| || |||| ||||||||||||    
T  13365477 ctaatacatggggtgtacaagggtgaatgcaattaaaaggtgtctatgta 13365526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 320
Target Start/End: Original strand, 36168835 - 36168928
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagca 320  Q
    ||||| |||||| ||| ||| | |||| || |||||||||  || || ||||||||||||| ||||||||   ||| |||||||||||||||||    
T  36168835 agagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagca 36168928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 401
Target Start/End: Original strand, 36168960 - 36169009
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||| |||||||||||||| |||||||  |||||||||||| ||||||    
T  36168960 ctaatgtatggggtgtacaagagtgtatgagaataaagggtgtttatgta 36169009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 401
Target Start/End: Original strand, 43490245 - 43490294
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||| ||| ||||||||||||||||||| || |||| ||||||||||||    
T  43490245 ctaatacatagggtgtacaagggtgtatgcaattaaaaggtgtctatgta 43490294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 4e-30; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 17470404 - 17470499
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||| ||| ||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 17470499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 224 - 322
Target Start/End: Complemental strand, 27714995 - 27714897
Alignment:
Q  224 agaagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||||| ||| |||||||||||||| |||||| |  ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  27714995 agaagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 27714897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 53982011 - 53982105
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53982105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 54868997 - 54868901
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| ||| ||||| ||||||||||||||| || ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  54868997 aagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcaca 54868901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 8076393 - 8076487
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||||||||| |||||||||| |||| |  ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 8076487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 33644200 - 33644294
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| || |||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 33644294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 49607412 - 49607508
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||    
T  49607412 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcaca 49607508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 233 - 322
Target Start/End: Original strand, 52629305 - 52629394
Alignment:
Q  233 atgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  52629305 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 52629394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 229 - 322
Target Start/End: Original strand, 31456690 - 31456783
Alignment:
Q  229 agtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||| ||| |||||  |||| ||||||||| |  ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  31456690 agtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 31456783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 226 - 304
Target Start/End: Complemental strand, 11095455 - 11095377
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgt 304  Q
    ||||||||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||    
T  11095455 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt 11095377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 229 - 322
Target Start/End: Complemental strand, 13898154 - 13898061
Alignment:
Q  229 agtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||| ||||||| | ||||||||||||||| |  |||||||||||| |||||||||||||||  ||| ||||||| | ||||||||||    
T  13898154 agtaatgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcaca 13898061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 33644324 - 33644377
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  33644324 ctaatgcatggggtgtataagggtgtatgggaataaagggtgtctatgtatcat 33644377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 52629424 - 52629477
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  52629424 ctaatgcatgggatgtacaagggtgtatggaaataatgggtgtctatgtatcat 52629477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 53982135 - 53982188
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  53982135 ctaatgcatggggtgtacaaggttgtatgggaataaagggtgtctatgtatcat 53982188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 54868871 - 54868818
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  54868871 ctaatgcatagggtgtacaagggtgtatggaaataaaaggtgtctatgtatcat 54868818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 41189866 - 41189770
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||| |||||| ||| ||| | |||||||||||||||||  |||||||||||| |||||| ||||||||   ||| |||||||||||||||||||    
T  41189866 aagagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcaca 41189770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 26141632 - 26141538
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||| |||||| ||| ||| | ||||||||||||||| |  || |||||||||||||||||||||||||  |||| |||||||| ||||||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcaca 26141538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 232 - 318
Target Start/End: Complemental strand, 48587187 - 48587101
Alignment:
Q  232 aatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    ||||||| ||| | ||| ||||||||||||||| |  |||||||| ||| |||||||||||||||| ||||||||| ||||||||||    
T  48587187 aatgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaag 48587101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 11095343 - 11095290
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  11095343 ctaatgcatcgggtgtacaagggtgtatgagaataaagggtgtctatgtatcat 11095290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 26141506 - 26141457
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  26141506 ctaatgtatggggtgtacaagagtgtatggaaataaagggtgtctatgta 26141457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 31456813 - 31456866
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||||||||||||||||||| |||| |||||||||||| ||||||||||    
T  31456813 ctaatgcatggggtgtacaagggtgcatgggaataaagggtgtttatgtatcat 31456866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 356 - 397
Target Start/End: Complemental strand, 33118822 - 33118781
Alignment:
Q  356 tgcatggggtgtacaagggtgtatggaaataaagggtgtcta 397  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  33118822 tgcatggggtgtacaagggtgtatggaaataaagggtgtcta 33118781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 33118953 - 33118872
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtgga 307  Q
    |||||| |||||| ||| ||||| ||||||| ||||||| |  ||||||||||||||||||| ||||||||| |||||||||    
T  33118953 aagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtgga 33118872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 48587077 - 48587024
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||||||||||    
T  48587077 ctaatgcatgggatgtacaagggtatatgggaataaagggtgtctatgtatcat 48587024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 49607538 - 49607591
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||||  |||||||||||||||||| |||||||||||||||||||||||    
T  49607538 ctaatgcatgacgtgtacaagggtgtatgggaataaagggtgtctatgtatcat 49607591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 9562998 - 9563093
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||| ||||||||| |||| || ||||||| |  |||||| ||| | |||||||||||||||| ||||||||| || |||||| ||||    
T  9562998 agagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacaca 9563093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 226 - 313
Target Start/End: Complemental strand, 36707526 - 36707439
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgc 313  Q
    ||||||||||||| ||| | ||| ||||||| ||||||| |  |||||| |||||||||||||||||||||| | ||||||| |||||    
T  36707526 aagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccgc 36707439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 14623939 - 14623845
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||| | ||||||||||||||| |  |||||||||||| |||||||||||| ||  ||| ||||||| | ||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcaca 14623845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 244 - 322
Target Start/End: Original strand, 26754711 - 26754789
Alignment:
Q  244 acacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||| ||||||||||||||| |  | |||| |||||||||||||||||| ||  |||| |||||||||||||||||||    
T  26754711 acacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 26754789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 228 - 318
Target Start/End: Complemental strand, 45058652 - 45058563
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    |||| |||||| ||||||||| ||||||||||||||| |  |||||||||||| |||||||||||| || | ||  |||||||||||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacaccc-ttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaag 45058563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 11347898 - 11347849
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||| |||||||||| |||||||||||| |||||||||||||||||||    
T  11347898 ctaatgtatggggtgtataagggtgtatgggaataaagggtgtctatgta 11347849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 41189740 - 41189691
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||| |||| ||||||||| ||||||||||||||||||||||||||||    
T  41189740 ctaatgtatggagtgtacaagagtgtatggaaataaagggtgtctatgta 41189691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 51419336 - 51419287
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||| |||||||||||||||||||||||||||||| ||||| ||||||    
T  51419336 ctaatgtatggggtgtacaagggtgtatggaaataaaaggtgtttatgta 51419287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 11348024 - 11347928
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||| |||||| ||| ||| | ||||||| |||||||||  |||||| |||||||||||||||||||||   ||| ||||||| ||| |||||||    
T  11348024 aagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcaca 11347928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 8956761 - 8956856
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||| ||| ||| | ||| |||||||||||||  |||||||||||| |||||| ||||||||  ||| |||||||   ||||||||||    
T  8956761 agagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcaca 8956856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 310
Target Start/End: Complemental strand, 24700055 - 24699972
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccc 310  Q
    |||||||||||| ||| ||| | |||| |||||||||| || |||||||||||| ||||||||| |||||   |||||||||||    
T  24700055 agagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccc 24699972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 51419460 - 51419366
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||| |||||| ||| ||| | |||| || |||||||||  || |||||||||||||||||||||||||   ||| | |||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcaca 51419366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 9563123 - 9563176
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||| | ||||||| ||||||||| |||||||||| ||||||||||||    
T  9563123 ctaatgcatgagttgtacaaaggtgtatgggaataaagggtatctatgtatcat 9563176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 20764891 - 20764842
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||| ||||||||||||||||||||||  |||||| ||||||||||||    
T  20764891 ctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgta 20764842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 36707404 - 36707351
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||| ||||||||||  ||||||| |||||| ||||||||||||||||    
T  36707404 ctaatgcatgaggtgtacaagaatgtatgggaataaaaggtgtctatgtatcat 36707351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 401
Target Start/End: Original strand, 26754829 - 26754868
Alignment:
Q  362 gggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  26754829 gggtgtacaaaggtgtatggaaataaagagtgtctatgta 26754868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 30801703 - 30801660
Alignment:
Q  358 catggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||||||||||||||||||||  |||||| ||||||||||||    
T  30801703 catggggtgtacaagggtgtatgagaataaaaggtgtctatgta 30801660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 35536625 - 35536720
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||| ||| ||| | ||| ||||||||||| |  |||||||||||| |||||| ||||||||  ||| |||||||   ||||||||||    
T  35536625 agagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcaca 35536720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 401
Target Start/End: Complemental strand, 48375672 - 48375633
Alignment:
Q  362 gggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  48375672 gggtgtacaaagatgtatggaaataaagggtgtctatgta 48375633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 20764971 - 20764921
Alignment:
Q  272 acacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||||||||||||||||   ||| ||||||||| |||||||||    
T  20764971 acacccacacaaaaatctgacacgtggccacatggaccccgtacaagcaca 20764921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 298
Target Start/End: Complemental strand, 21746284 - 21746211
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgaca--cccacacaaaaatctgacacgtaa 298  Q
    |||||||||||| ||| ||| | ||||||||||||||||   | ||||  ||||||||||||||||||||||||    
T  21746284 agagtaatgatacatatacatccttaggtggcaatacattcctggacacccccacacaaaaatctgacacgtaa 21746211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 322
Target Start/End: Complemental strand, 30801829 - 30801739
Alignment:
Q  232 aatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||| ||| ||||| |||||||  |||||| |  |||| |||||||||||||| ||||| ||| |||  |||||||| ||||||||||    
T  30801829 aatgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcaca 30801739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 35965876 - 35965806
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgt 296  Q
    ||||||||||||| ||| ||| | ||| |||  ||||||||  |||||||||||| |||||||||||||||    
T  35965876 aagagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacgt 35965806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 401
Target Start/End: Original strand, 35536754 - 35536799
Alignment:
Q  356 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||||||||||| |||||||||||  |||||| ||||||||||||    
T  35536754 tgcatggggtgtagaagggtgtatgagaataaatggtgtctatgta 35536799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 401
Target Start/End: Original strand, 42823235 - 42823284
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||| |||| |||||||||||||||||| || |||| ||||||||||||    
T  42823235 ctaatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgta 42823284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 45058529 - 45058480
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||| |||||||||||||| |||||||| || |||| ||||||||||||    
T  45058529 ctaatacatggggtgtacaatggtgtatgcaattaaaaggtgtctatgta 45058480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 401
Target Start/End: Complemental strand, 35965757 - 35965709
Alignment:
Q  353 taatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||| |||| ||||||||||||||||||  |||||| ||||||||||||    
T  35965757 taattcatgaggtgtacaagggtgtatgagaataaaaggtgtctatgta 35965709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 318
Target Start/End: Complemental strand, 36331407 - 36331339
Alignment:
Q  250 ttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    |||||||||||| || |  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 36331339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 41236347 - 41236441
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| ||||||||||||||| || |||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 41236441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 42044469 - 42044373
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| ||| ||||| |||||||||||||||||  |  |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42044469 aagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 42044373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 48183151 - 48183055
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| ||| ||||| ||| ||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  48183151 aagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48183055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 50052530 - 50052434
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| ||| ||| | ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50052530 aagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50052434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 11511562 - 11511468
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| ||||||||||||||| |  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 11511468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 480549 - 480453
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| ||| ||||| ||||||| ||||||| |  ||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  480549 aagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 480453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 3481654 - 3481748
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaataca-tctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||| || ||||||||||||| ||||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactct-ttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcaca 3481748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 6034044 - 6034138
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcaca 6034138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 54473633 - 54473539
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||||| ||||||| ||||||| |  ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 54473539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 322
Target Start/End: Complemental strand, 24995210 - 24995113
Alignment:
Q  225 gaagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||||||||  ||||| |||| |||||||||| |  |||||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  24995210 gaagagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcaca 24995113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 29239884 - 29239980
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| ||| ||||| ||||||||||||||| |  |||||| |||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  29239884 aagagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 29239980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 228 - 321
Target Start/End: Complemental strand, 50526271 - 50526178
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcac 321  Q
    ||||||||||| ||| ||| ||||||||||||||||| |  ||||||||||||||||||||||||||||  |||||||||  ||||||||||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcac 50526178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 23608233 - 23608329
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||||||| ||||| |||| || ||||||| |  ||||||||||||||||||||||||||||| ||||||| || || ||||||||||    
T  23608233 aagagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcaca 23608329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 29234346 - 29234251
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||| ||| ||||| |||| |||||||||| |  |||| |||  ||||||||||||||||||| ||||||||||||||||||||||||    
T  29234346 agagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 29234251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 41236471 - 41236524
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41236471 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcat 41236524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 42044343 - 42044290
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42044343 ctaatgcatgggatgtacaagggtgtatggaaataaagggtgtctatgtatcat 42044290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 24995082 - 24995030
Alignment:
Q  353 taatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  24995082 taatgcatggggtgtacaatggtgtatgggaataaagggtgtctatgtatcat 24995030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 48183024 - 48182972
Alignment:
Q  353 taatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  48183024 taatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcat 48182972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 226 - 293
Target Start/End: Complemental strand, 29548061 - 29547994
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 293  Q
    |||||| |||||| ||||||| | |||||||||||||||||  |||||||||||||||||||||||||    
T  29548061 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgaca 29547994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 227 - 318
Target Start/End: Original strand, 47986207 - 47986298
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    ||||| |||||| ||||||||| |||||||||||||||||  |||||| |||||||||||||||||| ||   ||  |||||||||||||||    
T  47986207 agagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaag 47986298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 41823926 - 41823976
Alignment:
Q  272 acacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  41823926 acacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcaca 41823976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 6034168 - 6034221
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  6034168 ctaatgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcat 6034221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 293
Target Start/End: Complemental strand, 55079814 - 55079749
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 293  Q
    |||| |||||| ||||||||| ||||||||||||||| || |||||||||| ||||||||||||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgaca 55079749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 19670818 - 19670726
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    |||||| |||||| ||||||||| ||||||||||||||| |  ||||||| ||||||||||||||||| ||   ||  |||||||||||||||    
T  19670818 aagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaag 19670726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 29977883 - 29977979
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||||| ||| | | |  |||||||||||||| |  || |||||||||||||||||||||||||| |||  |||||||| ||||||||||    
T  29977883 aagagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcaca 29977979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 31910192 - 31910286
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaataca-tctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||| |||||| ||| ||| | ||||||| ||||||| ||| |||||||||||||||||||||||||| ||  ||| |||||||||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactct-ttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcaca 31910286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 226 - 293
Target Start/End: Original strand, 55475189 - 55475256
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 293  Q
    |||||| |||||| ||||||| | ||||||||||||||| |  |||||||||||||||||||||||||    
T  55475189 aagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 55475256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 363 - 405
Target Start/End: Complemental strand, 53352539 - 53352497
Alignment:
Q  363 ggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  53352539 ggtgtacaagggtgtatgaaaataaagggtgtctatgtatcat 53352497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 401
Target Start/End: Original strand, 29240014 - 29240059
Alignment:
Q  356 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||    
T  29240014 tgcatggggtgtacaagagtgtatgggaataaagggtgtctatgta 29240059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 401
Target Start/End: Complemental strand, 50526143 - 50526098
Alignment:
Q  356 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||    
T  50526143 tgcatggggtgtacaagggtgtatagaaataaagggtgtttatgta 50526098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 11511437 - 11511386
Alignment:
Q  353 taatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||||    
T  11511437 taatgcatgaggtgtacaagggtgtatggaaataaa-tgtgtctatgtatcat 11511386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 32766955 - 32767023
Alignment:
Q  225 gaagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 293  Q
    ||||||| |||||| ||||||||  ||||||||||||||| |  |||||||||| ||||||||||||||    
T  32766955 gaagagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgaca 32767023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 48647828 - 48647732
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||| |||| | ||||||| | ||||||  ||||||| || || ||||||||| |||||||| ||||||  |||||||||| |||||||||||||    
T  48647828 aagagttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcaca 48647732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 318
Target Start/End: Complemental strand, 50813993 - 50813902
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    ||||| |||||| ||||||||  |||||||| |||||| |  ||||||||||||||||||||||||| ||  |||  || ||||||||||||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaag 50813902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 233 - 320
Target Start/End: Complemental strand, 53352660 - 53352574
Alignment:
Q  233 atgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagca 320  Q
    |||||| ||| ||||| ||||||| ||||||||   || ||||| |||||||||||||||||||| | | ||||||||||||||||||    
T  53352660 atgatacatagacacccttaggtg-caatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagca 53352574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 293
Target Start/End: Complemental strand, 44536846 - 44536781
Alignment:
Q  227 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 293  Q
    ||||| |||||| |||||||| |||||||||||||||| |  |||||| ||||||||||||||||||    
T  44536846 agagttatgatacataaacacttttaggtggcaataca-cccttgacatccacacaaaaatctgaca 44536781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 393
Target Start/End: Complemental strand, 480423 - 480382
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtg 393  Q
    |||||||||||||||||||| ||||||||||||||| |||||    
T  480423 ctaatgcatggggtgtacaaaggtgtatggaaataatgggtg 480382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 228 - 293
Target Start/End: Complemental strand, 8343263 - 8343198
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 293  Q
    |||| |||||| ||||||| | |||||||||||||||||  |||||||| ||| ||||||||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgaca 8343198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 19670692 - 19670643
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||| ||||||||||||||||||||||| || |||| ||||||||||||    
T  19670692 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 19670643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 23608359 - 23608412
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||| |||||||| || ||||||| |||||||| ||||||||||||||    
T  23608359 ctaatgcatgaggtgtacagggatgtatgggaataaaggatgtctatgtatcat 23608412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 29547935 - 29547886
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||| ||||||||||||||||||||||| || |||| ||||||||||||    
T  29547935 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 29547886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 54473509 - 54473456
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||| ||||| |||||||||||||||||| ||||||||||||  |||||||||    
T  54473509 ctaatacatggagtgtacaagggtgtatgggaataaagggtgttcatgtatcat 54473456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 401
Target Start/End: Original strand, 55475315 - 55475364
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||| ||||||||||||||||||||||| || |||| ||||||||||||    
T  55475315 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgta 55475364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 318
Target Start/End: Complemental strand, 17983821 - 17983753
Alignment:
Q  250 ttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 318  Q
    ||||||||||||||| |  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  17983821 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 17983753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 295
Target Start/End: Original strand, 40574779 - 40574846
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacg 295  Q
    |||| |||||| ||| ||| | |||||||| |||||| |  |||||||||||||||||||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacg 40574846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 30036994 - 30037032
Alignment:
Q  363 ggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  30036994 ggtgtacaaggatgtatgaaaataaagggtgtctatgta 30037032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 50052393 - 50052355
Alignment:
Q  363 ggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||||||| ||||||||| |||||||||||||||||||    
T  50052393 ggtgtacaaaggtgtatgggaataaagggtgtctatgta 50052355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 401
Target Start/End: Original strand, 31910316 - 31910365
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||| ||||| |||||||| |||||||| |||||| ||||||||||||    
T  31910316 ctaatgtatgggatgtacaagagtgtatgggaataaatggtgtctatgta 31910365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 401
Target Start/End: Original strand, 41824006 - 41824055
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    |||||||||| ||||||||| ||||||||  |||||| ||||||||||||    
T  41824006 ctaatgcatgaggtgtacaaaggtgtatgagaataaatggtgtctatgta 41824055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 28480346 - 28480274
Alignment:
Q  250 ttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||| |||||||  | || |||| ||||||||||||||||| ||| ||| ||||||||| ||||| ||||    
T  28480346 ttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28480274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 28481221 - 28481149
Alignment:
Q  250 ttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||| |||||||  | || |||| ||||||||||||||||| ||| ||| ||||||||| ||||| ||||    
T  28481221 ttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28481149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 28482096 - 28482024
Alignment:
Q  250 ttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||| |||||||  | || |||| ||||||||||||||||| ||| ||| ||||||||| ||||| ||||    
T  28482096 ttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28482024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 10211 - 10115
Alignment:
Q  226 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    |||||| |||||| ||| |||||||||||||||||||||||  |||||| ||||| |||||||||||||||| ||||||||||| || |||||||||    
T  10211 aagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcaca 10115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 10085 - 10032
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  10085 ctaatgcatagggtgtacaagggtgtatggaaataatgggtgtctatgtatcat 10032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 4029 - 4123
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| |||||||||| |||||||||| || || |||||||||||||||||||||||||| | ||||||| |||||| |||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 4123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 4153 - 4206
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgtatcat 405  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  4153 ctaatgcatggggtgtacaagggtgtatgggaataaatggtgtctatgtatcat 4206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 1029 - 935
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||| ||||||||||||||||| |  || ||| ||||||||||| |||||||||| ||||||| | ||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcaca 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 356 - 401
Target Start/End: Complemental strand, 901 - 856
Alignment:
Q  356 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||||    
T  901 tgcatggggtgtacaagagtgtatgggaataaagggtgtttatgta 856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 1029 - 935
Alignment:
Q  228 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||||||||| ||| ||| ||||||||||||||||| |  || ||| ||||||||||| |||||||||| ||||||| | ||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcaca 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 356 - 401
Target Start/End: Complemental strand, 901 - 856
Alignment:
Q  356 tgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||||    
T  901 tgcatggggtgtacaagagtgtatgggaataaagggtgtttatgta 856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 17077 - 17148
Alignment:
Q  251 taggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 322  Q
    ||||| ||||||||||  | |||| |||||||||||||||||| ||  |||| |||||||||||||||||||    
T  17077 taggttgcaatacatccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 17148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 17238 - 17276
Alignment:
Q  363 ggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  17238 ggtgtacaaaggtgtatggaaataaagggtgtctatgta 17276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 6560 - 6483
Alignment:
Q  152 ttgctgtgaggatagtgagacaagagtatgcatgtggt--ccttctacatgtatatactttggcctcattatttagaa 227  Q
    ||||| || |||||||||| |||| |||||||| ||||  |||||| ||| | |||||||||||||||||||||||||    
T  6560 ttgctttggggatagtgaggcaagggtatgcatttggtttccttctccatttgtatactttggcctcattatttagaa 6483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 241 - 293
Target Start/End: Original strand, 152511 - 152563
Alignment:
Q  241 taaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 293  Q
    |||||||| || |||||||||||| |  |||||||||||||||||||||||||    
T  152511 taaacacccttgggtggcaatacaccccttgacacccacacaaaaatctgaca 152563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 401
Target Start/End: Original strand, 152622 - 152671
Alignment:
Q  352 ctaatgcatggggtgtacaagggtgtatggaaataaagggtgtctatgta 401  Q
    ||||| |||||| |||||||||||||||| || |||| ||||||||||||    
T  152622 ctaatacatgggatgtacaagggtgtatgcaattaaaaggtgtctatgta 152671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University