View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21553_high_63 (Length: 325)
Name: NF21553_high_63
Description: NF21553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21553_high_63 |
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Alignment Details
Target: chr4 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 30 - 308
Target Start/End: Original strand, 39236424 - 39236702
Alignment:
| Q |
30 |
taattgtagcatatttcttaaaatatgaatcttgtaatatatatttgatattataccaacatagtacgacacttaggnnnnnnnaacaagcccaagtaag |
129 |
Q |
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| T |
39236424 |
taattgtagcatatttcttaaaatatgaatcttgtaatatatatttgatattataccaacatagtacgacacttaggtttttttaacaagcccaagtaag |
39236523 |
T |
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| Q |
130 |
tagtatatacttgagttctttgctaatttgataggtttgatctctaatcaatgcttatgtcgagaaaagccaattatttaaatgaattttagttatctca |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
39236524 |
tagtatatacttgagttctttgctaatttgataggtttgatctctaatcaatgcttatgtcgagaaaagccaataatttaaatgaattttagttatctca |
39236623 |
T |
|
| Q |
230 |
aaggtttagttttggtatataaaaattgtatcaatatgtgtatattgaaacaggaaccatatggctatacccggtgatg |
308 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39236624 |
aaggtttagttttggtatataaaaattgtatcaatatgtgtatattgaaacaggaaccatatggctatacccggtgatg |
39236702 |
T |
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