View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21553_high_64 (Length: 323)

Name: NF21553_high_64
Description: NF21553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21553_high_64
NF21553_high_64
[»] chr7 (21 HSPs)
chr7 (124-302)||(5555467-5555645)
chr7 (124-302)||(3114105-3114283)
chr7 (128-310)||(36630800-36630983)
chr7 (128-302)||(8394109-8394283)
chr7 (124-300)||(14777118-14777294)
chr7 (144-310)||(37002144-37002311)
chr7 (144-302)||(8867740-8867898)
chr7 (144-310)||(34389056-34389223)
chr7 (148-310)||(26624749-26624913)
chr7 (153-310)||(35090177-35090335)
chr7 (163-310)||(40920003-40920151)
chr7 (175-302)||(38638245-38638372)
chr7 (144-302)||(33685564-33685722)
chr7 (151-310)||(43184468-43184628)
chr7 (144-310)||(7002725-7002892)
chr7 (144-310)||(7048596-7048763)
chr7 (162-310)||(36658199-36658348)
chr7 (203-270)||(10868514-10868583)
chr7 (131-219)||(26502797-26502885)
chr7 (131-219)||(26589829-26589917)
chr7 (144-189)||(10876829-10876874)
[»] chr2 (23 HSPs)
chr2 (124-302)||(42439966-42440144)
chr2 (124-300)||(41251645-41251821)
chr2 (124-302)||(18981597-18981774)
chr2 (118-302)||(35962689-35962873)
chr2 (124-302)||(16405580-16405758)
chr2 (124-302)||(32127150-32127328)
chr2 (124-300)||(17445052-17445226)
chr2 (124-300)||(6403815-6403991)
chr2 (128-310)||(31581622-31581805)
chr2 (124-281)||(2958131-2958287)
chr2 (144-310)||(44084603-44084770)
chr2 (144-310)||(45418583-45418750)
chr2 (144-302)||(8147351-8147510)
chr2 (150-302)||(771005-771157)
chr2 (127-301)||(2285845-2286019)
chr2 (146-302)||(8059342-8059498)
chr2 (162-310)||(12756837-12756986)
chr2 (144-244)||(26237957-26238056)
chr2 (163-310)||(26162702-26162847)
chr2 (51-120)||(34220462-34220531)
chr2 (153-219)||(7072644-7072710)
chr2 (172-270)||(4555250-4555350)
chr2 (21-53)||(34220418-34220450)
[»] chr5 (23 HSPs)
chr5 (127-302)||(10033910-10034085)
chr5 (127-302)||(13817960-13818135)
chr5 (128-309)||(1776377-1776559)
chr5 (124-297)||(36293635-36293808)
chr5 (124-300)||(39434676-39434852)
chr5 (124-302)||(39657515-39657693)
chr5 (124-300)||(26283329-26283505)
chr5 (124-295)||(3155647-3155818)
chr5 (131-310)||(19985926-19986106)
chr5 (122-310)||(37254619-37254808)
chr5 (144-310)||(17332551-17332718)
chr5 (162-300)||(16155015-16155153)
chr5 (174-302)||(16333885-16334013)
chr5 (144-310)||(12278860-12279027)
chr5 (144-310)||(31680367-31680534)
chr5 (158-310)||(33430335-33430488)
chr5 (144-299)||(31501728-31501883)
chr5 (163-310)||(43068896-43069044)
chr5 (146-310)||(36291373-36291538)
chr5 (157-270)||(28801300-28801415)
chr5 (127-180)||(14316641-14316694)
chr5 (123-154)||(16334015-16334046)
chr5 (122-170)||(26543906-26543954)
[»] chr4 (41 HSPs)
chr4 (124-310)||(25930688-25930875)
chr4 (128-310)||(36382346-36382528)
chr4 (124-300)||(20129290-20129466)
chr4 (123-302)||(29319714-29319893)
chr4 (122-300)||(34407295-34407473)
chr4 (124-300)||(26439290-26439466)
chr4 (127-310)||(17511233-17511417)
chr4 (124-300)||(13012168-13012344)
chr4 (124-300)||(47500753-47500929)
chr4 (124-299)||(43143596-43143771)
chr4 (123-300)||(43355883-43356060)
chr4 (147-310)||(3292896-3293060)
chr4 (127-293)||(10352902-10353068)
chr4 (145-299)||(42333788-42333942)
chr4 (144-310)||(30216742-30216909)
chr4 (144-302)||(6690244-6690402)
chr4 (127-302)||(40528996-40529173)
chr4 (127-302)||(50205086-50205261)
chr4 (127-310)||(6235515-6235687)
chr4 (146-310)||(48989330-48989495)
chr4 (145-295)||(30077647-30077797)
chr4 (161-310)||(44156668-44156818)
chr4 (150-310)||(29995983-29996144)
chr4 (179-310)||(1817752-1817884)
chr4 (147-299)||(28877262-28877414)
chr4 (144-298)||(26448053-26448206)
chr4 (172-299)||(35545981-35546108)
chr4 (146-270)||(30109958-30110084)
chr4 (222-299)||(13392893-13392970)
chr4 (222-299)||(13396032-13396109)
chr4 (127-229)||(27363344-27363446)
chr4 (156-241)||(48129978-48130063)
chr4 (146-244)||(45194178-45194276)
chr4 (124-185)||(7769308-7769369)
chr4 (172-237)||(6254572-6254637)
chr4 (144-181)||(49908782-49908819)
chr4 (145-192)||(13392989-13393036)
chr4 (145-192)||(13396128-13396175)
chr4 (144-181)||(5517494-5517531)
chr4 (128-229)||(20113775-20113876)
chr4 (144-181)||(50720476-50720513)
[»] chr6 (12 HSPs)
chr6 (120-302)||(34948767-34948949)
chr6 (124-302)||(13837801-13837979)
chr6 (124-300)||(398597-398773)
chr6 (144-310)||(28996730-28996897)
chr6 (144-310)||(18339106-18339273)
chr6 (150-295)||(29743289-29743434)
chr6 (160-310)||(33229336-33229487)
chr6 (144-229)||(24697899-24697984)
chr6 (144-240)||(31028435-31028531)
chr6 (159-229)||(24695502-24695572)
chr6 (144-180)||(13647017-13647053)
chr6 (159-191)||(3050094-3050126)
[»] chr1 (12 HSPs)
chr1 (124-302)||(7433425-7433603)
chr1 (127-310)||(42310941-42311125)
chr1 (123-300)||(26144234-26144411)
chr1 (131-300)||(32982067-32982236)
chr1 (148-310)||(3828988-3829150)
chr1 (144-302)||(17445313-17445471)
chr1 (122-310)||(35907530-35907719)
chr1 (152-310)||(321377-321536)
chr1 (124-247)||(23313218-23313342)
chr1 (127-270)||(41972314-41972458)
chr1 (144-270)||(33489687-33489815)
chr1 (144-180)||(44352614-44352650)
[»] chr3 (21 HSPs)
chr3 (123-300)||(22968455-22968632)
chr3 (124-300)||(6269437-6269613)
chr3 (124-300)||(19390126-19390302)
chr3 (128-299)||(34084134-34084305)
chr3 (124-300)||(39771770-39771946)
chr3 (124-310)||(11018212-11018399)
chr3 (144-310)||(45182981-45183148)
chr3 (144-310)||(6930894-6931061)
chr3 (127-310)||(40081741-40081922)
chr3 (144-295)||(19565517-19565668)
chr3 (144-295)||(45335875-45336025)
chr3 (123-299)||(6503581-6503757)
chr3 (143-310)||(27935177-27935345)
chr3 (144-310)||(33040953-33041120)
chr3 (144-310)||(35514266-35514429)
chr3 (128-199)||(22922141-22922212)
chr3 (63-121)||(44254068-44254126)
chr3 (166-270)||(5135291-5135397)
chr3 (144-193)||(5354709-5354758)
chr3 (144-181)||(6890998-6891035)
chr3 (263-310)||(22922214-22922262)
[»] chr8 (15 HSPs)
chr8 (127-310)||(29728386-29728570)
chr8 (128-302)||(15838270-15838443)
chr8 (127-310)||(3648794-3648978)
chr8 (148-310)||(16788025-16788188)
chr8 (124-299)||(34136837-34137012)
chr8 (144-299)||(4404008-4404163)
chr8 (124-300)||(39914495-39914670)
chr8 (144-310)||(23402108-23402275)
chr8 (144-310)||(36408551-36408718)
chr8 (166-298)||(9877242-9877374)
chr8 (144-299)||(2729208-2729363)
chr8 (176-310)||(42230971-42231104)
chr8 (160-270)||(3435285-3435397)
chr8 (167-237)||(40470567-40470637)
chr8 (144-229)||(10397122-10397207)
[»] scaffold0069 (1 HSPs)
scaffold0069 (124-300)||(17822-17998)
[»] scaffold0002 (1 HSPs)
scaffold0002 (123-300)||(480468-480645)
[»] scaffold2142 (1 HSPs)
scaffold2142 (124-300)||(502-678)
[»] scaffold0502 (1 HSPs)
scaffold0502 (144-310)||(5230-5397)
[»] scaffold0154 (1 HSPs)
scaffold0154 (144-310)||(31480-31647)
[»] scaffold0041 (1 HSPs)
scaffold0041 (163-310)||(52944-53092)


Alignment Details
Target: chr7 (Bit Score: 151; Significance: 7e-80; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 124 - 302
Target Start/End: Original strand, 5555467 - 5555645
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||| ||||||    
T  5555467 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacgcattta 5555566  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  5555567 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgg 5555645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 124 - 302
Target Start/End: Complemental strand, 3114283 - 3114105
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  3114283 catgggcggttctaccgtatggtgaccccggacggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 3114184  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  3114183 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgg 3114105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 128 - 310
Target Start/End: Original strand, 36630800 - 36630983
Alignment:
Q  128 ggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaa 227  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| | |||||||||||||||||||||||||    
T  36630800 ggcggttctaccgtatggcgaccccggacggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaa 36630899  T
Q  228 aagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||    
T  36630900 aagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttagttagcacactattgacgggttcatctc 36630983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 128 - 302
Target Start/End: Original strand, 8394109 - 8394283
Alignment:
Q  128 ggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaa 227  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| | |||||||||||||||||||||||||    
T  8394109 ggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaa 8394208  T
Q  228 aagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    | |||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  8394209 aggaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacgg 8394283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 124 - 300
Target Start/End: Complemental strand, 14777294 - 14777118
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||||||||| | |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  14777294 catgggcggttctaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagctcattaacacattta 14777195  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  14777194 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 14777118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 144 - 310
Target Start/End: Complemental strand, 37002311 - 37002144
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||||||||||||||  ||| ||| |||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  37002311 ggcgaccccgggcggtcgttcggtctcgatcgataatttttgcacattagacccaatccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 37002212  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    |||| |||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  37002211 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 37002144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 8867898 - 8867740
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||| | ||||| |||||||||||||||||||||||||||    
T  8867898 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcatattagacccaatccaaaagccaattaatacatttacaaaaagaaaaatttgggca 8867799  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    |||  |||||| |||||||||||||||| | ||||||||||||||||||||||||||||    
T  8867798 atcggaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacgg 8867740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 144 - 310
Target Start/End: Complemental strand, 34389223 - 34389056
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||   ||||||||| |||||||||||||||||||||||    
T  34389223 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggca 34389124  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    |||| |||||| |||||||||||||||| | |||||||||||||||||| ||| ||| ||||||||||    
T  34389123 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacattatcgacgggttcatctc 34389056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 148 - 310
Target Start/End: Original strand, 26624749 - 26624913
Alignment:
Q  148 accccgggcggtcgcccgggctcaat-cgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatc 246  Q
    |||||||||||||||| |||||| || |||||||||||||| ||||||| ||||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  26624749 accccgggcggtcgcctgggctcgattcgataatttttgcatattagacccaatccaaaagttaattaacacacttacaaaaagaaaaatttgggcaatc 26624848  T
Q  247 taaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    | |||||| |||||||||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  26624849 tgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 26624913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 153 - 310
Target Start/End: Original strand, 35090177 - 35090335
Alignment:
Q  153 gggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctaaaaa 252  Q
    |||||||||||||||||| ||| |||||||||||||||||||| ||| ||||||| | ||||||||| ||||||||||||||||||||| ||||| ||||    
T  35090177 gggcggtcgcccgggctcgatcaataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggtaatctgaaaa 35090276  T
Q  253 ttgtcacacgcaaataggtattggaattttatttagcacactattgacgg-ttcatctc 310  Q
    || |||||||||||||||| | |||||||||||||||||||||||||||| ||||||||    
T  35090277 ttctcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 35090335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 40920151 - 40920003
Alignment:
Q  163 ccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctaaaaattgtcacacg 262  Q
    |||||||| ||||||||||||||||||||||| | || ||||||| | |||||||||||||||||||||||||||||| |||||| |||||| ||||| |    
T  40920151 ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg 40920052  T
Q  263 caaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    ||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  40920051 caaataggtctcggaattttatttagcacactattgacgggttcatctc 40920003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 175 - 302
Target Start/End: Complemental strand, 38638372 - 38638245
Alignment:
Q  175 gataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtatt 274  Q
    ||||||||||||||||||||  ||| ||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||| |     
T  38638372 gataatttttgcacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctc 38638273  T
Q  275 ggaattttatttagcacactattgacgg 302  Q
    ||||||||||||||||||||||||||||    
T  38638272 ggaattttatttagcacactattgacgg 38638245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 33685564 - 33685722
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||||| ||| ||||| ||||||| ||||||||||||||||||||| || ||| ||||||| ||||||||||| |||||||||||||||||||||||    
T  33685564 ggcgaccccaggcagtcgctcgggctcgatcgataatttttgcacattaaacccaacccaaaagcccattaacacacttacaaaaagaaaaatttgggca 33685663  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    |||| |||||| ||| ||||||||| || |   ||||||||||||||||||||||||||    
T  33685664 atctgaaaattctcatacgcaaatatgtctcataattttatttagcacactattgacgg 33685722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 151 - 310
Target Start/End: Complemental strand, 43184628 - 43184468
Alignment:
Q  151 ccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctaaa 250  Q
    |||||||||||| ||||||| ||||||||||||| | ||| ||||| || ||||||| | ||||||| | ||||||||||||||||||||||||||| ||    
T  43184628 ccgggcggtcgctcgggctcgatcgataatttttacgcatcagacttaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaa 43184529  T
Q  251 aattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    |||| |||||||||||||||| |  ||||||||||||||||||||||||| ||||||||||    
T  43184528 aattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 43184468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 144 - 310
Target Start/End: Original strand, 7002725 - 7002892
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    |||||||||| |||||||||||||||| |||||  ||||||  |||||| || ||| ||||||| | |||||||||  |||||||| |||||||||| ||    
T  7002725 ggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaaaaataaaaatttggaca 7002824  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    ||||||||||| ||||||||||||||||   |||||||||||||||||||||||||| ||||||||||    
T  7002825 atctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7002892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 144 - 310
Target Start/End: Original strand, 7048596 - 7048763
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    |||||||||| |||||||||||||||| |||||  ||||||  |||||| || ||| ||||||| | |||||||||  |||||||| |||||||||| ||    
T  7048596 ggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaaaaataaaaatttggaca 7048695  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    ||||||||||| ||||||||||||||||   |||||||||||||||||||||||||| ||||||||||    
T  7048696 atctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7048763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 162 - 310
Target Start/End: Original strand, 36658199 - 36658348
Alignment:
Q  162 cccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctaaaaattgtcacac 261  Q
    ||||| ||| |||||||||||||||||||| ||| ||| | ||||| | ||||||| | | ||||||| ||||||||||||||||| |||||| ||||||    
T  36658199 cccggactcgatcgataatttttgcacattggacccaaccgaaaagccaattaacatactaacaaaaataaaaatttgggcaatctgaaaattctcacac 36658298  T
Q  262 gcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    |||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  36658299 gcaaataggtctcggaattttatttagcacactattgacgggttcatctc 36658348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 10868583 - 10868514
Alignment:
Q  203 aaaagtccattaacacatttacaaaaagaaaaatttgggc--aatctaaaaattgtcacacgcaaatagg 270  Q
    ||||| ||||||||||||||||||||||||||||||||||  ||||| |||||| |||| ||||||||||    
T  10868583 aaaagcccattaacacatttacaaaaagaaaaatttgggcaaaatctgaaaattctcacgcgcaaatagg 10868514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 219
Target Start/End: Original strand, 26502797 - 26502885
Alignment:
Q  131 ggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacaca 219  Q
    ||||| ||||| |||||||||| ||| ||||||||||||| |||||   |||||||| ||||  | ||| ||||||| |||||||||||    
T  26502797 ggttccaccgtgtggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacaca 26502885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 219
Target Start/End: Complemental strand, 26589917 - 26589829
Alignment:
Q  131 ggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacaca 219  Q
    ||||| ||||| |||||||||| ||| ||||||||||||| |||||   |||||||| ||||  | ||| ||||||| |||||||||||    
T  26589917 ggttccaccgtgtggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacaca 26589829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 10876874 - 10876829
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcaca 189  Q
    ||||| |||| | |||||||||||||| ||||||||||||||||||    
T  10876874 ggcgaacccgtgtggtcgcccgggctcgatcgataatttttgcaca 10876829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 151; Significance: 7e-80; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 124 - 302
Target Start/End: Original strand, 42439966 - 42440144
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||| |||||||||||||||    
T  42439966 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactaaacccaaaagcccattaacacattta 42440065  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  42440066 caaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttgcaattttatttagcacactattgacgg 42440144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 124 - 300
Target Start/End: Complemental strand, 41251821 - 41251645
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||||||||| | | |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  41251821 catgggcggttctaccgtgtagtgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 41251722  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  41251721 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 41251645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 124 - 302
Target Start/End: Original strand, 18981597 - 18981774
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  18981597 catgggcggttctaccgtatggcgaccc-gggcggtcgtccgggctcgattgataatttttgcacattagactcaacccaaaagtccattaaaacattta 18981695  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  18981696 caaaaagaaaaatttgggcaatttaaaaattgtcacacgcaaataggtcttggaattttatttagcacactgttgacgg 18981774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 118 - 302
Target Start/End: Original strand, 35962689 - 35962873
Alignment:
Q  118 tggaggcatgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaaca 217  Q
    |||| |||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||| |||||||   |||||||    
T  35962689 tggaagcatgggcggttctaccgtatggcgaccccaggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcttattaaca 35962788  T
Q  218 catttacaaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    ||||||||||||||||| |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  35962789 catttacaaaaagaaaattttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgg 35962873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 124 - 302
Target Start/End: Original strand, 16405580 - 16405758
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||  ||||||||||||||    
T  16405580 catgggcggttctaccatatggtgaccctgggcggtcgcccgggctcaatcgataatttttgcacgttagactcaacccaaaagctcattaacacattta 16405679  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
     |||||||||||||||| |||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  16405680 taaaaagaaaaatttggacaatctgaaaattgtcacacgcaaataagtcttggaattttatttagcacactattgacgg 16405758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 124 - 302
Target Start/End: Complemental strand, 32127328 - 32127150
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||| | |||||||  ||||||||||||||    
T  32127328 catgggcggttctagcgtatggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattaaactcgacccaaaagctcattaacacattta 32127229  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  32127228 caaaaagaaaaatttaggcaatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacactattgacgg 32127150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 124 - 300
Target Start/End: Complemental strand, 17445226 - 17445052
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||||||||| |||||||| |||||||||||||| |||| |||||||||||||||||  ||||||||| ||||||| |||||||||||||||    
T  17445226 catgggcggttctaccgtgtggcgacctcgggcggtcgcccgagctcgatcgataatttttgcac--tagactcaacccaaaagcccattaacacattta 17445129  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  17445128 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 17445052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 124 - 300
Target Start/End: Complemental strand, 6403991 - 6403815
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||| ||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| ||||||||||||||    
T  6403991 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacattta 6403892  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
     ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||||||||||||    
T  6403891 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 6403815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 128 - 310
Target Start/End: Complemental strand, 31581805 - 31581622
Alignment:
Q  128 ggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaa 227  Q
    ||||||||||| ||||||||||| ||||||||||||| ||||| | ||||| |||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  31581805 ggcggttctactgtatggcgaccacgggcggtcgcccaggctcgagcgatactttttgcatattagactcatcccaaaagcccattaacacatttacaaa 31581706  T
Q  228 aagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  31581705 aagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 31581622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 124 - 281
Target Start/End: Complemental strand, 2958287 - 2958131
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||| ||||||| |||||||||||||||    
T  2958287 catgggcggttctaccgtatggcgaccccgggcggtcgtccgggctcgatcgataatttt-gcacattagactcaacccaaaagcccattaacacattta 2958189  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattt 281  Q
    |||| ||||||||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  2958188 caaagagaaaaatttgggtaatctgaaaattgtcacacgcaaataggtcttggaattt 2958131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 144 - 310
Target Start/End: Complemental strand, 44084770 - 44084603
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||    
T  44084770 ggcgaccccgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaatccaaaagttcattaacacacttacaaaaagaaaaatttgggca 44084671  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    |||| |||||| ||| |||||||||||| |  ||||||||||||||||||||||||| ||||||||||    
T  44084670 atctgaaaattctcatacgcaaataggtctcagaattttatttagcacactattgacgggttcatctc 44084603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 144 - 310
Target Start/End: Original strand, 45418583 - 45418750
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||  ||| ||||||| | ||||||||| |||||||||||||||||||||||    
T  45418583 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 45418682  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    |||| |||||| |||||||||||||||| |  ||||||||||||||||||||||||| ||||||||||    
T  45418683 atctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 45418750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 8147351 - 8147510
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||  |||||||| ||||||||| |||||||||||||||||||||||    
T  8147351 ggcgaccccgggcggtcgcccgggctcgatcgataatctttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgggca 8147450  T
Q  244 atct-aaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    |||| ||||||| |||||||||||||| | | ||||||||||||| ||||||||||||||    
T  8147451 atctgaaaaattctcacacgcaaatagatctcggaattttatttaacacactattgacgg 8147510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 150 - 302
Target Start/End: Original strand, 771005 - 771157
Alignment:
Q  150 cccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctaa 249  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||| ||| | ||||| ||||||||||| ||||||||||||||||||||||||||| |    
T  771005 cccgggcggtcgcccgggctcgatcgataacttttgcacattagacccaaccaaaaagcccattaacacacttacaaaaagaaaaatttgggcaatctga 771104  T
Q  250 aaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    ||||| |||||||||||||||| | |||| ||||||||||||| |||||||||    
T  771105 aaattctcacacgcaaataggtctcggaactttatttagcacattattgacgg 771157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 127 - 301
Target Start/End: Original strand, 2285845 - 2286019
Alignment:
Q  127 gggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaa 226  Q
    |||||||||||||| ||||||| | ||| |||||   | || || ||||||||||||||||||||| |  ||| | ||||||| |||||||||||||| |    
T  2285845 gggcggttctaccggatggcgatctcggacggtcattcaggttcgatcgataatttttgcacattaaatccaaccaaaaagtctattaacacatttacga 2285944  T
Q  227 aaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacg 301  Q
    || |||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2285945 aaggaaaaatttgagcaatctgaaaattgtcacacgcaaataggttttggaattttatttagcacactattgacg 2286019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 146 - 302
Target Start/End: Complemental strand, 8059498 - 8059342
Alignment:
Q  146 cgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaat 245  Q
    ||||||||| || |||||| ||||||||||||||||||||||||||||| |||| ||||||| | ||||||||| |||||||||||||||||||| ||||    
T  8059498 cgaccccggccgatcgcccaggctcaatcgataatttttgcacattagagtcaacccaaaagccaattaacacacttacaaaaagaaaaatttggccaat 8059399  T
Q  246 ctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
     | |||||| |||||| ||||| ||| | ||||||||||||||||||| ||||||||    
T  8059398 ttgaaaattctcacacacaaatcggtctcggaattttatttagcacacaattgacgg 8059342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 162 - 310
Target Start/End: Complemental strand, 12756986 - 12756837
Alignment:
Q  162 cccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctaaaaattgtcacac 261  Q
    |||||| || ||||||||||||||| |||||||| ||| ||||||| | ||||||||| ||||||||||||||||||| ||||||| |||||| ||||||    
T  12756986 cccgggttcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacac 12756887  T
Q  262 gcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    ||||||| || | |||||||||||||||||||||||||| ||||||||||    
T  12756886 gcaaataagtctcggaattttatttagcacactattgacgggttcatctc 12756837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 144 - 244
Target Start/End: Original strand, 26237957 - 26238056
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||||||||||||||||||||||| ||||||| |||||||| ||||||  ||| ||||||||||||||||||| |||||||||||||||||||||||    
T  26237957 ggcgaccccgggcggtcgcccgggctcgatcgata-tttttgcaaattagatgcaaaccaaaagtccattaacacacttacaaaaagaaaaatttgggca 26238055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 26162847 - 26162702
Alignment:
Q  163 ccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctaaaaattgtcacacg 262  Q
    ||||||||  |||||||||||| ||||||| | |||| ||||||  ||||||||||| |||||||||||||||||||||||||||||||||| ||| ||     
T  26162847 ccgggctccttcgataatttttacacattaaattcaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcaaaca 26162748  T
Q  263 caaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    ||||||||| | |||   |||||||||||| ||||||| ||||||||||    
T  26162747 caaataggtctcgga---ttatttagcacattattgacgggttcatctc 26162702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 34220462 - 34220531
Alignment:
Q  51 acaaagcgaaactcccctaatgcaaaagacaatcctttgggttccaactccattcgtataaaagacatgg 120  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34220462 acaaagcgaaactcccctaacgcaaaagacaatcatttgggttccaactccattcgtataaaagacatgg 34220531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 7072710 - 7072644
Alignment:
Q  153 gggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacaca 219  Q
    |||||||||||||||||| |||||||||||||  |||||| |||||| ||||||| |||||||||||    
T  7072710 gggcggtcgcccgggctcgatcgataatttttttacattaaactcaacccaaaagcccattaacaca 7072644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 4555350 - 4555250
Alignment:
Q  172 atcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggc--aatctaaaaattgtcacacgcaaatag 269  Q
    ||||||||||||||||||| | || ||| |||||||  | |||||||| |||||||||||||| |||||||  ||||| |||||| ||||||| ||||||    
T  4555350 atcgataatttttgcacatcaaacccaacccaaaagctcgttaacacacttacaaaaagaaaattttgggcaaaatctgaaaattctcacacgtaaatag 4555251  T
Q  270 g 270  Q
    |    
T  4555250 g 4555250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 34220418 - 34220450
Alignment:
Q  21 aaccgcgccagaccccaaactcgcagctgtaca 53  Q
    |||||||||||||||||||||||||||||||||    
T  34220418 aaccgcgccagaccccaaactcgcagctgtaca 34220450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 148; Significance: 4e-78; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 127 - 302
Target Start/End: Original strand, 10033910 - 10034085
Alignment:
Q  127 gggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaa 226  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  10033910 gggcggttctaccgtatggcgaccccggacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 10034009  T
Q  227 aaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10034010 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgg 10034085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 127 - 302
Target Start/End: Original strand, 13817960 - 13818135
Alignment:
Q  127 gggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaa 226  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  13817960 gggcggttctaccgtatggcgaccccgggcggtcgctcgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 13818059  T
Q  227 aaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  13818060 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaaatttatttagcacactattgacgg 13818135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 128 - 309
Target Start/End: Complemental strand, 1776559 - 1776377
Alignment:
Q  128 ggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaa 227  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||| | |||| | |||||||||||||||||||||||||    
T  1776559 ggcggttctaccgtatgacgaccccgggcggtcgcccgggctcgatcgataatttttgtacattaaagtcaaccaaaaagtccattaacacatttacaaa 1776460  T
Q  228 aagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatct 309  Q
    |||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||    
T  1776459 aagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactatcgacaggttcatct 1776377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 124 - 297
Target Start/End: Complemental strand, 36293808 - 36293635
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||||||||| ||||||||||| ||||||| |||| ||| |||||||||||||| ||||||||||||| ||||||| |||||||||||||||    
T  36293808 catgggcggttctaccgtgtggcgaccccgagcggtcgtccggactcgatcgataatttttgtacattagactcaacccaaaagcccattaacacattta 36293709  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactatt 297  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||    
T  36293708 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactatt 36293635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 124 - 300
Target Start/End: Original strand, 39434676 - 39434852
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| ||||||| |||||||||||||||    
T  39434676 catgggcggttctaccgtgtggcgaccctgggcggtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacattta 39434775  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
    ||||| |||||||||||||||||| |||||||||||| | |||||||| || |||||||||||||||||||||||||    
T  39434776 caaaatgaaaaatttgggcaatctgaaaattgtcacatgtaaataggtctttgaattttatttagcacactattgac 39434852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 124 - 302
Target Start/End: Complemental strand, 39657693 - 39657515
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||||||  |||||||||||| | ||||||  ||||||| || ||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  39657693 catgggcggttctactatatggcgaccccagacggtcgttcgggctcgattgataatttttgcacattagactcaacccaaaagctcattaacacattta 39657594  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39657593 caaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgg 39657515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 124 - 300
Target Start/End: Complemental strand, 26283505 - 26283329
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||| ||||| | |||||| ||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| ||||||||||||||    
T  26283505 catgggcggttccaccgtgtagcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacattta 26283406  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
     ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||||||||||||    
T  26283405 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 26283329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 124 - 295
Target Start/End: Complemental strand, 3155818 - 3155647
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||||| |||||||||| ||||||||||||| ||||||| ||| |||||||||||||||| ||||||| | |||||||||||||||||||||    
T  3155818 catgggcggttctatcgtatggcgatcccgggcggtcgctcgggctcgatcaataatttttgcacattcgactcaacctaaaagtccattaacacattta 3155719  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacacta 295  Q
     |||||||||||||||| |||||| ||||||||||||||||||||| | |||||||||||||||||||||||    
T  3155718 taaaaagaaaaatttggacaatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacacta 3155647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 131 - 310
Target Start/End: Original strand, 19985926 - 19986106
Alignment:
Q  131 ggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaag 230  Q
    |||| ||||||||| ||||| |||||||||| ||| |||| ||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  19985926 ggttttaccgtatgacgacctcgggcggtcgtccgagctcgatcgataatttttgcacattagattcaacccaaaagtccattagcacatttacaaaaag 19986025  T
Q  231 aaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    ||||||||||| |||||||||||| |||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  19986026 aaaaatttgggtaatctaaaaattatcacacgcaaataggtcttgaaattttatttaacacactattgacaggttcatctc 19986106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 122 - 310
Target Start/End: Original strand, 37254619 - 37254808
Alignment:
Q  122 ggcatgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatt 221  Q
    |||||||||||||  ||||   ||||||||| ||||||||||| ||||| |||||||||||||||||||||||| ||| ||||||||| ||||||||| |    
T  37254619 ggcatgggcggtttcaccgctcggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagacccaacccaaaagtcaattaacacact 37254718  T
Q  222 tacaaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||| | |||||||||||||||||| ||||||| ||||||||||    
T  37254719 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatctc 37254808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 144 - 310
Target Start/End: Complemental strand, 17332718 - 17332551
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    |||||||||||||| |||||||||||| |||||||||||||||| ||||||| ||| ||||||| | ||||||||| |||||||||||||||||||||||    
T  17332718 ggcgaccccgggcgttcgcccgggctcgatcgataatttttgcatattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 17332619  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg-ttcatctc 310  Q
    |||| |||||| |||||||||||||||| | |||||||||||||||||||||||||||| ||||||||    
T  17332618 atctgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 17332551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 162 - 300
Target Start/End: Original strand, 16155015 - 16155153
Alignment:
Q  162 cccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctaaaaattgtcacac 261  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  16155015 cccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttaggcaatctgaaaattgtcacac 16155114  T
Q  262 gcaaataggtattggaattttatttagcacactattgac 300  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  16155115 gcaaataggtcttggaattttatttagcacactattgac 16155153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 174 - 302
Target Start/End: Complemental strand, 16334013 - 16333885
Alignment:
Q  174 cgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtat 273  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  16334013 cgataatttttgcacattagattcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtct 16333914  T
Q  274 tggaattttatttagcacactattgacgg 302  Q
    |||||||||||||||||||||||||||||    
T  16333913 tggaattttatttagcacactattgacgg 16333885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 144 - 310
Target Start/End: Complemental strand, 12279027 - 12278860
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||| | | ||||||||| |||||||||||||||||||||||    
T  12279027 ggcgatcccgggcggtcgcccggactcgatcgataatttttgcacattagacccaacccaaaggccaattaacacacttacaaaaagaaaaatttgggca 12278928  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    |||| |||||| |||||||||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  12278927 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacaggttcatctc 12278860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 144 - 310
Target Start/End: Original strand, 31680367 - 31680534
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||||||||||||||||||||||| ||||||||||||| | |||||||| ||| ||||||| | ||||||||| |||||||||||||||||||||||    
T  31680367 ggcgaccccgggcggtcgcccgggctcgatcgataatttttccgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 31680466  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    |||| |||||| ||||| |||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  31680467 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 31680534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 158 - 310
Target Start/End: Original strand, 33430335 - 33430488
Alignment:
Q  158 gtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctaaaaattgtc 257  Q
    ||||||||||||| ||||||||||||||| |||||||| ||| ||||||| | ||||||||| ||||||||||||||||||||||||||| |||||| ||    
T  33430335 gtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctc 33430434  T
Q  258 acacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    |||||||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  33430435 acacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33430488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 144 - 299
Target Start/End: Complemental strand, 31501883 - 31501728
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    |||||||||||||| | |||||||||| |||||||||||||||||||||||| ||| ||||||| | ||||||||| |||||||||||||||||||||||    
T  31501883 ggcgaccccgggcgattgcccgggctcgatcgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 31501784  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattga 299  Q
    |||| |||||| || ||||||||||||| | | |||||||||||||||||||||||    
T  31501783 atctgaaaattctcgcacgcaaataggtctcgaaattttatttagcacactattga 31501728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 43068896 - 43069044
Alignment:
Q  163 ccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctaaaaattgtcacacg 262  Q
    |||||||| ||| ||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| |    
T  43068896 ccgggctcgatcaataattttttcacattagacccaacccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattcttacatg 43068995  T
Q  263 caaataggtattggaattttatttagcacactattgacgg-ttcatctc 310  Q
     ||||| || | |||||||||||||||||||||||| ||| ||||||||    
T  43068996 taaataagtctcggaattttatttagcacactattgccggattcatctc 43069044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 146 - 310
Target Start/End: Original strand, 36291373 - 36291538
Alignment:
Q  146 cgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaat 245  Q
    |||| ||||||||||| ||||| || ||| |||||||||||||||||||   || | |||||| ||||||||||||||||||||||||||||||||||||    
T  36291373 cgactccgggcggtcgtccgggttcgatcaataatttttgcacattagatctaacctaaaagttcattaacacatttacaaaaagaaaaatttgggcaat 36291472  T
Q  246 ctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    || |||||| | |||| ||||||||| |  |||||||||||| |||||||||||| ||||||||||    
T  36291473 ctcaaaattattacacacaaataggtctcagaattttatttaacacactattgacgggttcatctc 36291538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 28801300 - 28801415
Alignment:
Q  157 ggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttggg--caatctaaaaatt 254  Q
    |||||||| ||||| |||||||||||||||||||||||  ||| ||||||| ||||||||||| |||||||||||||||||||||   ||| | ||||||    
T  28801300 ggtcgccctggctcgatcgataatttttgcacattagatccaaaccaaaagcccattaacacacttacaaaaagaaaaatttgggaaaaatatgaaaatt 28801399  T
Q  255 gtcacacgcaaatagg 270  Q
     |||||||||||||||    
T  28801400 ctcacacgcaaatagg 28801415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 14316641 - 14316694
Alignment:
Q  127 gggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataat 180  Q
    |||||||||||||||||||||| | ||||||||||||| ||||| |||||||||    
T  14316641 gggcggttctaccgtatggcgatctcgggcggtcgcccaggctcgatcgataat 14316694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 154
Target Start/End: Complemental strand, 16334046 - 16334015
Alignment:
Q  123 gcatgggcggttctaccgtatggcgaccccgg 154  Q
    ||||||||||||||||||||||||||||||||    
T  16334046 gcatgggcggttctaccgtatggcgaccccgg 16334015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 26543954 - 26543906
Alignment:
Q  122 ggcatgggcggttctaccgtatggcgaccccgggcggtcgcccgggctc 170  Q
    |||| |||||||| |||||   |||||||||||||||||||||||||||    
T  26543954 ggcaggggcggttttaccgcccggcgaccccgggcggtcgcccgggctc 26543906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 1e-75; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 124 - 310
Target Start/End: Original strand, 25930688 - 25930875
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||| |||||| ||||||| |||||||||||||||    
T  25930688 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatctataatttttgcacattaaactcaacccaaaagcccattaacacattta 25930787  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  25930788 caaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 25930875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 128 - 310
Target Start/End: Complemental strand, 36382528 - 36382346
Alignment:
Q  128 ggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaa 227  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||| | |||||||||||||||||||||| ||    
T  36382528 ggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatccataatttttgcacattaaactcaaccaaaaagtccattaacacatttac-aa 36382430  T
Q  228 aagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  36382429 aagaaaaatttggacaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 36382346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 124 - 300
Target Start/End: Original strand, 20129290 - 20129466
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||| ||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  20129290 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 20129389  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| || ||||||||||| |||||||||||||    
T  20129390 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttagaattttatttggcacactattgac 20129466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 123 - 302
Target Start/End: Complemental strand, 29319893 - 29319714
Alignment:
Q  123 gcatgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattt 222  Q
    ||||||||||||||||||||||| |||||| |||||||| || ||||| |||||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  29319893 gcatgggcggttctaccgtatggtgacccctggcggtcgtccaggctcgatcgataatttttgcacattagactcaacccaaaatcccattaacacattt 29319794  T
Q  223 acaaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    ||||||||||||||||| ||||||| ||||||||||||| |||||| || ||||||||||||||||||||||||||||||    
T  29319793 acaaaaagaaaaatttgagcaatctgaaaattgtcacacacaaataagtcttggaattttatttagcacactattgacgg 29319714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 122 - 300
Target Start/End: Complemental strand, 34407473 - 34407295
Alignment:
Q  122 ggcatgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatt 221  Q
    |||||||||||||| ||||| | ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  34407473 ggcatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatt 34407374  T
Q  222 tacaaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
    || ||||||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||  ||||||||||||    
T  34407373 tataaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgac 34407295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 124 - 300
Target Start/End: Complemental strand, 26439466 - 26439290
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||| ||||| | ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  26439466 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 26439367  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
     ||||||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||  ||||||||||||    
T  26439366 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgac 26439290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 127 - 310
Target Start/End: Complemental strand, 17511417 - 17511233
Alignment:
Q  127 gggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaa 226  Q
    ||||||||||||||||||||||||| || ||||||||| | ||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  17511417 gggcggttctaccgtatggcgaccctgg-cggtcgcccagactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 17511319  T
Q  227 aaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattgg-aattttatttagcacactattga-cggttcatctc 310  Q
    ||||||||||||||||||| | |||||||| |||||||||||||| |||| |||||||||||||||| |||||| |||||||||||    
T  17511318 aaagaaaaatttgggcaatttgaaaattgttacacgcaaataggtcttggaaattttatttagcacattattgatcggttcatctc 17511233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 124 - 300
Target Start/End: Original strand, 13012168 - 13012344
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||| ||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||| |||| | |||||  ||||||||||||||    
T  13012168 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagattcaaccaaaaagctcattaacacattta 13012267  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
     ||||||||||||||||||||| | |||||||||||||| |||||||| |||||||||||||| |||||||||||||    
T  13012268 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 13012344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 124 - 300
Target Start/End: Original strand, 47500753 - 47500929
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||| ||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||  ||||||||||||||    
T  47500753 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 47500852  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
      |||||||||||||||||||| | |||||||||||||| |||||||| |||||||||||||| |||||||||||||    
T  47500853 tgaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 47500929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 124 - 299
Target Start/End: Complemental strand, 43143771 - 43143596
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||  |||||  | ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| | ||||||||| |||    
T  43143771 catgggcggtttcaccgtccgacgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 43143672  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattga 299  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| | ||||||||||||||||||| |||||    
T  43143671 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 43143596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 123 - 300
Target Start/End: Original strand, 43355883 - 43356060
Alignment:
Q  123 gcatgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattt 222  Q
    ||||||||||||| ||||| | |||||||| ||| |||||||||||||  ||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  43355883 gcatgggcggttccaccgtgtagcgaccccaggcagtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattt 43355982  T
Q  223 acaaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
    | ||||||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||  ||||||||||||    
T  43355983 ataaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgac 43356060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 147 - 310
Target Start/End: Complemental strand, 3293060 - 3292896
Alignment:
Q  147 gaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatc 246  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||| ||| ||||||| | ||||||||| ||||||||||||||||||||||||||    
T  3293060 gaccccgggcggtcgcccgggctcgatcgataatttttgcccattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatc 3292961  T
Q  247 taaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacg-gttcatctc 310  Q
    | |||||| |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||    
T  3292960 tgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 3292896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 127 - 293
Target Start/End: Complemental strand, 10353068 - 10352902
Alignment:
Q  127 gggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaa 226  Q
    ||||||||  |||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||    
T  10353068 gggcggtttcaccgtccggcgacccctggcggtcgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagtccattaacacatttacaa 10352969  T
Q  227 aaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacac 293  Q
    || |||||||||||||||||| |||||| | |||||||||||||| | |||||||||||||||||||    
T  10352968 aaggaaaaatttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacac 10352902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 145 - 299
Target Start/End: Complemental strand, 42333942 - 42333788
Alignment:
Q  145 gcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaa 244  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| ||||||||||||||||||||||||    
T  42333942 gcgatcccgggcggtcgtccgggctcaatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 42333843  T
Q  245 tctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattga 299  Q
    ||| |||||| |||||||||||||||| | ||||||||||||||||||| |||||    
T  42333842 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 42333788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 144 - 310
Target Start/End: Complemental strand, 30216909 - 30216742
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||   ||||||||| |||||||||||||||||||||||    
T  30216909 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggca 30216810  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    |||| |||||| ||||| |||||||| | | |||||||||||||||||||||||||| ||||||||||    
T  30216809 atctgaaaattctcacatgcaaatagatctcggaattttatttagcacactattgacgggttcatctc 30216742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 6690402 - 6690244
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||| ||||||| | ||||||||| |||||||||||||||||||||||    
T  6690402 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 6690303  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    | || |||||| |||||||||||||||| | | ||||||||||||||||||||||||||    
T  6690302 aactgaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgacgg 6690244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 127 - 302
Target Start/End: Original strand, 40528996 - 40529173
Alignment:
Q  127 gggcggttctaccgtatggcgaccccgggcg--gtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttac 224  Q
    ||||||||||||||||||||||||| |||||  |||| |||| ||| ||||||||||||||||||||| |||||| | ||||   |||||||||||||||    
T  40528996 gggcggttctaccgtatggcgaccctgggcgaggtcgtccggactcgatcgataatttttgcacattaaactcaacctaaaaactcattaacacatttac 40529095  T
Q  225 aaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    |||||||||||||||| |||| | |||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  40529096 aaaaagaaaaatttggacaatttgaaaattgtcacatgcaaataggtcttggaattttatttagcacactattgacgg 40529173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 127 - 302
Target Start/End: Complemental strand, 50205261 - 50205086
Alignment:
Q  127 gggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaa 226  Q
    ||||||||  |||||  ||||| |||||||||||||||| |||| |||||||||||||||||||||||  ||| ||||||| | ||||||||| ||||||    
T  50205261 gggcggtttcaccgtccggcgatcccgggcggtcgcccgagctcgatcgataatttttgcacattagatccaacccaaaagccaattaacacacttacaa 50205162  T
Q  227 aaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    ||||||||| |||| |||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  50205161 aaagaaaaaattggacaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgg 50205086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 127 - 310
Target Start/End: Original strand, 6235515 - 6235687
Alignment:
Q  127 gggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaa 226  Q
    ||||||||||||||||||||||  | |||||||||| ||||||| | |||||||||||||||            ||||||||||||||||||||||||||    
T  6235515 gggcggttctaccgtatggcgattctgggcggtcgctcgggctcgaccgataatttttgcac------------ccaaaagtccattaacacatttacaa 6235602  T
Q  227 aaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    ||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  6235603 aaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 6235687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 146 - 310
Target Start/End: Original strand, 48989330 - 48989495
Alignment:
Q  146 cgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaat 245  Q
    |||| ||||||||||  ||||| || ||||||||||||||||||||| || |||  |||||||||||||||||| |||||||||||||||||||||||||    
T  48989330 cgactccgggcggtcaaccgggttcgatcgataatttttgcacattaaacccaactcaaaagtccattaacacacttacaaaaagaaaaatttgggcaat 48989429  T
Q  246 ctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    || |||||| ||| |||||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  48989430 ctgaaaattctcatacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 48989495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 145 - 295
Target Start/End: Complemental strand, 30077797 - 30077647
Alignment:
Q  145 gcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaa 244  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||| |||    
T  30077797 gcgacctcgggcggtcgcccaggctcaatcgataaattttgcacattagacccaaccaaaaagttcattaacacatttacaaaaagaaaaatttggacaa 30077698  T
Q  245 tctaaaaattgtcacacgcaaataggtattggaattttatttagcacacta 295  Q
    ||| |||||| | |||| ||||||||| ||| |||||||||||||||||||    
T  30077697 tctgaaaatttttacacacaaataggtcttgaaattttatttagcacacta 30077647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 161 - 310
Target Start/End: Original strand, 44156668 - 44156818
Alignment:
Q  161 gcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctaaaaattgtcaca 260  Q
    |||||||||||| |||||||||||||||||||||| ||| ||||||| | ||||||||| |||||||||||||| ||||| |||||| |||||| || ||    
T  44156668 gcccgggctcaaccgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaattttggacaatctgaaaattctctca 44156767  T
Q  261 cgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    ||||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  44156768 cgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 44156818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 150 - 310
Target Start/End: Complemental strand, 29996144 - 29995983
Alignment:
Q  150 cccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctaa 249  Q
    ||||| |||||| |||| ||| |||||||||||||| ||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||| |    
T  29996144 cccggacggtcgtccggactcgatcgataatttttgtacattagactcaaccaaaaagtccattaacacatttacgaaaagaaaaatttgggcaatctga 29996045  T
Q  250 aaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg-ttcatctc 310  Q
    ||||| |  ||||||||||| | | ||||||||||| |||||||||||||||| ||||||||    
T  29996044 aaattcttgcacgcaaatagttctcggaattttattaagcacactattgacggattcatctc 29995983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 1817752 - 1817884
Alignment:
Q  179 atttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaa 278  Q
    ||||||||||||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| | |||||||||||||| | ||||    
T  1817752 atttttgcacattagatccaatccaaaagtccattaatacatttataaaaagaaaaatttgggcaatctaaaaattcttacacgcaaataggtctcggaa 1817851  T
Q  279 ttttatttagcacactattgacgg-ttcatctc 310  Q
    ||||||||| |||||||||| ||| ||||||||    
T  1817852 ttttatttaacacactattgtcggattcatctc 1817884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 147 - 299
Target Start/End: Complemental strand, 28877414 - 28877262
Alignment:
Q  147 gaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatc 246  Q
    ||||||| ||||||||  |||||  ||||||||||||||||||||||| |||| | |||||   ||||||||  ||| ||||||||||||||||| ||||    
T  28877414 gaccccgtgcggtcgcttgggctagatcgataatttttgcacattagattcaacctaaaagctaattaacacgcttataaaaagaaaaatttgggaaatc 28877315  T
Q  247 taaaaattgtcacacgcaaataggtattggaattttatttagcacactattga 299  Q
    |||||||| |||||||||||||||| | |||||||||||||||||||||||||    
T  28877314 taaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 28877262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 144 - 298
Target Start/End: Original strand, 26448053 - 26448206
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    |||||| ||| ||| ||| |||| ||| ||||||||||||||||||||| |   || ||||||||||||||||||| ||||||||| |||||||||||||    
T  26448053 ggcgactccgtgcgatcgtccggactcgatcgataatttttgcacattaaatctaacccaaaagtccattaacacacttacaaaaa-aaaaatttgggca 26448151  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattg 298  Q
    |||| |||||| ||| || ||||||||| | ||||||||||||||||||||||||    
T  26448152 atctgaaaattctcatacacaaataggtttcggaattttatttagcacactattg 26448206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 172 - 299
Target Start/End: Original strand, 35545981 - 35546108
Alignment:
Q  172 atcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggt 271  Q
    ||||| ||||||||| ||| |||| ||| ||||||| | ||||||||| |||||||||||||| |||||||||||| |||||| |||||||||||| |||    
T  35545981 atcgacaatttttgcgcatcagacccaacccaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctcacacgcaaatgggt 35546080  T
Q  272 attggaattttatttagcacactattga 299  Q
     |  ||||||||||||||||||||||||    
T  35546081 ctctgaattttatttagcacactattga 35546108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 146 - 270
Target Start/End: Original strand, 30109958 - 30110084
Alignment:
Q  146 cgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggc--a 243  Q
    ||||||||| ||||||||||| ||| |||||||||||||||||||||||| ||| || |||| ||||||||||| |||||||||||||||||||| |  |    
T  30109958 cgaccccggacggtcgcccggactcgatcgataatttttgcacattagacccaaacccaaagaccattaacacacttacaaaaagaaaaatttggacaaa 30110057  T
Q  244 atctaaaaattgtcacacgcaaatagg 270  Q
    || | |||| | |||||||||||||||    
T  30110058 atatgaaaaatctcacacgcaaatagg 30110084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 13392970 - 13392893
Alignment:
Q  222 tacaaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattga 299  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| | | |||||||||||||||||||||||    
T  13392970 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13392893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 13396109 - 13396032
Alignment:
Q  222 tacaaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattga 299  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| | | |||||||||||||||||||||||    
T  13396109 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13396032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 229
Target Start/End: Original strand, 27363344 - 27363446
Alignment:
Q  127 gggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaa 226  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| |||||   |||||||| ||||| | ||| ||||||| ||||||||||| ||||||    
T  27363344 gggcggttttaccgtatggcgacctcgggcggtcgcccgggctcgatcgaatttttttgcatattaggcccaacccaaaagcccattaacacacttacaa 27363443  T
Q  227 aaa 229  Q
    |||    
T  27363444 aaa 27363446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 48129978 - 48130063
Alignment:
Q  156 cggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttggg 241  Q
    |||||| |||||||| |||||||||||||||| ||||||| ||| |||||||  |||||||||| |||||||||||||||||||||    
T  48129978 cggtcgaccgggctcgatcgataatttttgcatattagacccaacccaaaagctcattaacacacttacaaaaagaaaaatttggg 48130063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 244
Target Start/End: Original strand, 45194178 - 45194276
Alignment:
Q  146 cgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaa 244  Q
    ||||||| |||| | |||||| ||| ||| ||||||||||||||||| |||||| ||||||||||||||||||| ||||||||| ||||  ||||||||    
T  45194178 cgaccccaggcgattgcccggactcgatcaataatttttgcacattaaactcaacccaaaagtccattaacacacttacaaaaaaaaaatattgggcaa 45194276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 7769308 - 7769369
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttg 185  Q
    |||||||||||  |||||  ||||||||| ||||||||||||||||| ||||||||||||||    
T  7769308 catgggcggtttcaccgtccggcgaccccaggcggtcgcccgggctcgatcgataatttttg 7769369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 6254572 - 6254637
Alignment:
Q  172 atcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatt 237  Q
    ||||||||||||||||||||| || ||| ||||||| | ||||||||| || |||||| |||||||    
T  6254572 atcgataatttttgcacattaaacccaacccaaaagacaattaacacacttgcaaaaaaaaaaatt 6254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 49908819 - 49908782
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatt 181  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  49908819 ggcgaccccgggcggtcgcccgggctcgatcgataatt 49908782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 13393036 - 13392989
Alignment:
Q  145 gcgaccccgggcggtcgcccgggctcaatcgataatttttgcacatta 192  Q
    |||||||||| |||||||||||||||||||||| | ||||||| ||||    
T  13393036 gcgaccccggacggtcgcccgggctcaatcgatgacttttgcatatta 13392989  T

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Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 13396175 - 13396128
Alignment:
Q  145 gcgaccccgggcggtcgcccgggctcaatcgataatttttgcacatta 192  Q
    |||||||||| |||||||||||||||||||||| | ||||||| ||||    
T  13396175 gcgaccccggacggtcgcccgggctcaatcgatgacttttgcatatta 13396128  T

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Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 5517531 - 5517494
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatt 181  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  5517531 ggcgaccccgggcggtcgcctgggctcgatcgataatt 5517494  T

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Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 229
Target Start/End: Original strand, 20113775 - 20113876
Alignment:
Q  128 ggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaa 227  Q
    |||||||| ||||  |||||||||||| |  |||||||  ||||||||||||||| |  |||||||  |||| ||||||| | ||||||||| ||| |||    
T  20113775 ggcggttccaccgcctggcgaccccggacactcgcccgaactcaatcgataatttctttacattaggttcaacccaaaagccgattaacacacttaaaaa 20113874  T
Q  228 aa 229  Q
    ||    
T  20113875 aa 20113876  T

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Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 50720513 - 50720476
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatt 181  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  50720513 ggcgacctcgggcggtcgcccgggctcaatcaataatt 50720476  T

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Target: chr6 (Bit Score: 143; Significance: 4e-75; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 120 - 302
Target Start/End: Complemental strand, 34948949 - 34948767
Alignment:
Q  120 gaggcatgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacaca 219  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  34948949 gaggcatgggcggttctaccgtatggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacaca 34948850  T
Q  220 tttacaaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||| | ||| ||||||||||||||||||||||||||    
T  34948849 tttacaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaatagatcttgaaattttatttagcacactattgacgg 34948767  T

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Target: chr6; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 124 - 302
Target Start/End: Original strand, 13837801 - 13837979
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||||||||||||||||||||||||| |||| |||| || |||||||||||||| ||||||||||||| |||||||  ||| ||||||||||    
T  13837801 catgggcggttctaccgtatggcgaccccgggcgatcgctcgggttcgatcgataatttttgtacattagactcaacccaaaagcacatcaacacattta 13837900  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13837901 caaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgg 13837979  T

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Target: chr6; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 124 - 300
Target Start/End: Original strand, 398597 - 398773
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||| ||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||  ||||||||||||||    
T  398597 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 398696  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
     ||||||||||||||||||||| | |||||||||||||| |||||||| |||||||||||||| |||||||||||||    
T  398697 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 398773  T

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Target: chr6; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 144 - 310
Target Start/End: Original strand, 28996730 - 28996897
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    |||||||||||||||||||||| |||| ||||||||||||||| |||||||| ||| | ||||||| ||||||||| |||||||||||||||||||||||    
T  28996730 ggcgaccccgggcggtcgcccgagctcgatcgataatttttgcgcattagacccaacctaaaagtcaattaacacacttacaaaaagaaaaatttgggca 28996829  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    |||| |||||| |||||||||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  28996830 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 28996897  T

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Target: chr6; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 144 - 310
Target Start/End: Original strand, 18339106 - 18339273
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||| | ||||||||| |||||||||||||| ||||||||    
T  18339106 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 18339205  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    |||| |||||| ||||| |||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  18339206 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 18339273  T

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Target: chr6; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 150 - 295
Target Start/End: Original strand, 29743289 - 29743434
Alignment:
Q  150 cccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctaa 249  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||| | |||||| |||||||||||||||| ||||||||||||||||||||| |    
T  29743289 cccgggcggttgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagttcattaacacatttacagaaagaaaaatttgggcaatctga 29743388  T
Q  250 aaattgtcacacgcaaataggtattggaattttatttagcacacta 295  Q
    ||||| | |||||||||||||| | |||||||||||||||||||||    
T  29743389 aaattcttacacgcaaataggtctcggaattttatttagcacacta 29743434  T

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Target: chr6; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 160 - 310
Target Start/End: Complemental strand, 33229487 - 33229336
Alignment:
Q  160 cgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctaaaaattgtcac 259  Q
    ||||||||||| |||||| ||||||| ||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||| | ||    
T  33229487 cgcccgggctcgatcgatcatttttgtacattagacccaacccaaaagtccattaacacatttccaaaaagaaaaatttgggcaatctgaaaattcttac 33229388  T
Q  260 acgcaaataggtattggaattttatttagcacactattgacgg-ttcatctc 310  Q
    ||| ||||| || | || ||||||||||||||||||||| ||| ||||||||    
T  33229387 acgtaaataagtctcgggattttatttagcacactattgccggattcatctc 33229336  T

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Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 24697984 - 24697899
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaa 229  Q
    ||||||||||| |  |||||||||||||||||||||||||| |||||||| | ||| ||||||| ||||||||||| |||||||||    
T  24697984 ggcgaccccggacactcgcccgggctcaatcgataattttttcacattaggcccaacccaaaagcccattaacacacttacaaaaa 24697899  T

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Target: chr6; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 144 - 240
Target Start/End: Complemental strand, 31028531 - 31028435
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgg 240  Q
    |||||||||| ||||| |||||| ||| |||||||||||||||||||||||  ||| | |||||  ||||||||||||||||||||| ||| |||||    
T  31028531 ggcgaccccgagcggttgcccggactcgatcgataatttttgcacattagatccaacctaaaagctcattaacacatttacaaaaaggaaattttgg 31028435  T

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Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 24695502 - 24695572
Alignment:
Q  159 tcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaa 229  Q
    |||||| |||| ||||||| ||||||  ||||||| ||||| ||||||| ||||||||||| |||||||||    
T  24695502 tcgcccaggctaaatcgatcattttttaacattaggctcaacccaaaagcccattaacacacttacaaaaa 24695572  T

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Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 13647017 - 13647053
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataat 180  Q
    ||||||||||||||||||||||||||| |||||||||    
T  13647017 ggcgaccccgggcggtcgcccgggctcgatcgataat 13647053  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 191
Target Start/End: Original strand, 3050094 - 3050126
Alignment:
Q  159 tcgcccgggctcaatcgataatttttgcacatt 191  Q
    |||||||||||||||| ||||||||||||||||    
T  3050094 tcgcccgggctcaatcaataatttttgcacatt 3050126  T

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Target: chr1 (Bit Score: 139; Significance: 1e-72; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 124 - 302
Target Start/End: Original strand, 7433425 - 7433603
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| ||| |||||||||||||||||||||||| ||||||| |||||||||||||||    
T  7433425 catgggcggttctaccgtatggcaaccccgggcggtcgcccgagctcgatctataatttttgcacattagactcaacccaaaagcccattaacacattta 7433524  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||    
T  7433525 caaaaagaaaattttgggcaatctaaaaattgtcacacacaaataggtcttgaaattttatttagcacactattgacgg 7433603  T

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Target: chr1; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 127 - 310
Target Start/End: Complemental strand, 42311125 - 42310941
Alignment:
Q  127 gggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaa 226  Q
    |||||||||||||||||||||||||| | || |||||||||||| |||||||||||||||||||||||||||| ||||||| || |||||||||||||||    
T  42311125 gggcggttctaccgtatggcgaccccagacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccgttaacacatttacaa 42311026  T
Q  227 aaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    ||||||||||||||||||||| |||||||||||||||||||| || ||| |||||||||||| || |||||||| ||||||||||    
T  42311025 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataagtcttgaaattttatttagtacgctattgacgggttcatctc 42310941  T

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Target: chr1; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 123 - 300
Target Start/End: Original strand, 26144234 - 26144411
Alignment:
Q  123 gcatgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattt 222  Q
    ||||||||||||| ||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||  |||||||||||||    
T  26144234 gcatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattt 26144333  T
Q  223 acaaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
    | ||||||||||||||||||||| | |||||||||||||| |||||||| |||||||||||||| |||||||||||||    
T  26144334 ataaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 26144411  T

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Target: chr1; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 131 - 300
Target Start/End: Complemental strand, 32982236 - 32982067
Alignment:
Q  131 ggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaag 230  Q
    |||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||| ||| | ||||| ||||||||| ||||||||||||    
T  32982236 ggttctaccgtatggcgaccccgggcggtcgcgcgggcccgatcgataatttttgcacattagacccaacctaaaagcccattaacatatttacaaaaag 32982137  T
Q  231 aaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
    |||||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  32982136 aaaaatttggacaatctgaaaattgtcacacacaaataggtcttggaattttatttagcactctattgac 32982067  T

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Target: chr1; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 148 - 310
Target Start/End: Original strand, 3828988 - 3829150
Alignment:
Q  148 accccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatct 247  Q
    ||||||| ||||||| |||| || ||||||||||||||||||||| || ||| |||||||| |||||||||| |||||||||||||||||||||||||||    
T  3828988 accccggacggtcgctcgggttcgatcgataatttttgcacattaaacccaacccaaaagttcattaacacacttacaaaaagaaaaatttgggcaatct 3829087  T
Q  248 aaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
     |||||| ||| ||||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  3829088 gaaaattttcatacgcaaataggt-ctggaattttatttagcacactattgacgggttcatctc 3829150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 17445313 - 17445471
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    |||||||||  |||||||||||||||  ||| |||||||||| ||||||||  ||| ||||||||| ||||||||| |||||||||||||||||||||||    
T  17445313 ggcgaccccatgcggtcgcccgggctggatcaataatttttgtacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 17445412  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    |||| |||||| |||||||||||||||| | |||||||||||||||||| |||||||||    
T  17445413 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgg 17445471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 122 - 310
Target Start/End: Original strand, 35907530 - 35907719
Alignment:
Q  122 ggcatgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatt 221  Q
    |||||||||||||  ||||   ||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||| ||||||| | ||||  ||| |    
T  35907530 ggcatgggcggtttcaccgcccggcgacctcgggcggtcgcccgggcttgatcgataatttttgcacattagacccaacccaaaagccaattagtacact 35907629  T
Q  222 tacaaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacg-gttcatctc 310  Q
    ||||||||||||| |||||| ||||| |||||| |||||||||||||||| | |||||||||||||||||| |||||||| |||||||||    
T  35907630 tacaaaaagaaaattttgggtaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgagttcatctc 35907719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 152 - 310
Target Start/End: Complemental strand, 321536 - 321377
Alignment:
Q  152 cgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctaaaa 251  Q
    |||||||||| |||||||| ||||||||||||||  |||||||  ||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  321536 cgggcggtcgtccgggctcgatcgataatttttgtgcattagatccaacccaaaagtccattaacacagttacaaaaagaaaaatttgggcaatctgaaa 321437  T
Q  252 attgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    ||| ||| | |||||||||| | ||||||||||||| |||| ||||||| ||||||||||    
T  321436 attctcatatgcaaataggtctcggaattttatttaacacattattgacgggttcatctc 321377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 124 - 247
Target Start/End: Original strand, 23313218 - 23313342
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataattt-ttgcacattagactcaatccaaaagtccattaacacattt 222  Q
    ||||||||||||||||||||||||| | |||||||| |||||||||| || ||| |||| |||||||||||||||||   |||||| |||||||||||||    
T  23313218 catgggcggttctaccgtatggcgatctcgggcggttgcccgggctcgattgatgatttgttgcacattagactcaacataaaagttcattaacacattt 23313317  T
Q  223 acaaaaagaaaaatttgggcaatct 247  Q
    |||||||||||||||||||||||||    
T  23313318 acaaaaagaaaaatttgggcaatct 23313342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 41972458 - 41972314
Alignment:
Q  127 gggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaa 226  Q
    ||||||||| |||||   ||||||||||||||||||| || ||| |||||||||||||||||||||||  ||| | ||||| | ||||||||| ||||||    
T  41972458 gggcggttccaccgtccagcgaccccgggcggtcgcctgg-ctcgatcgataatttttgcacattagatccaacctaaaagcctattaacacacttacaa 41972360  T
Q  227 aaagaaaaatttgg--gcaatctaaaaattgtcacacgcaaatagg 270  Q
    ||||||||||||||    ||||| |||||| |||||||||||||||    
T  41972359 aaagaaaaatttggaaaaaatctgaaaattctcacacgcaaatagg 41972314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 33489687 - 33489815
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggc- 242  Q
    ||||||||||| ||||||  |||| |   ||||||||||||| ||||||||||||| | ||||| ||||||||||| |||| |||||||||||||| ||     
T  33489687 ggcgaccccggacggtcgttcgggattgttcgataatttttgtacattagactcaaactaaaagcccattaacacacttactaaaagaaaaatttgagca 33489786  T
Q  243 -aatctaaaaattgtcacacgcaaatagg 270  Q
     ||||| |||||| |||||||||||||||    
T  33489787 aaatctgaaaattctcacacgcaaatagg 33489815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 44352650 - 44352614
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataat 180  Q
    |||||||||||| |||||||||||||| |||||||||    
T  44352650 ggcgaccccgggaggtcgcccgggctcgatcgataat 44352614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 4e-72; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 123 - 300
Target Start/End: Complemental strand, 22968632 - 22968455
Alignment:
Q  123 gcatgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattt 222  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||||| ||||||||||||||||||||||||| || ||||||| ||||||||||||||    
T  22968632 gcatgggcggttctaccgtgtagcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagacttaacccaaaagcccattaacacattt 22968533  T
Q  223 acaaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||    
T  22968532 acaaaaagaaaaatttgggcaatctaaaaattgtcacacgtaaataggtcttgaaattttatttagcacactattgac 22968455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 124 - 300
Target Start/End: Complemental strand, 6269613 - 6269437
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||||||||| | |||| |||||||||||| |||| ||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  6269613 catgggcggttctaccgtgtagcgatcccgggcggtcgtccggactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 6269514  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  6269513 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 6269437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 124 - 300
Target Start/End: Original strand, 19390126 - 19390302
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||| ||||||||||| ||||||||||||||||||| ||||| || |||||||||||||||||||||||||||| | ||||||| |||||||||||||    
T  19390126 catgggaggttctaccgtgtggcgaccccgggcggtcgtccgggttcgatcgataatttttgcacattagactcaacctaaaagtctattaacacattta 19390225  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  19390226 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 19390302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 128 - 299
Target Start/End: Complemental strand, 34084305 - 34084134
Alignment:
Q  128 ggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaa 227  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| | |||| | |||||||||||||||||||||||||    
T  34084305 ggcggttctaccgtatggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattaaattcaaccaaaaagtccattaacacatttacaaa 34084206  T
Q  228 aagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattga 299  Q
    |||||||||||||||||| | |||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  34084205 aagaaaaatttgggcaatatgaaaattatcacacgcaaataggtcttggaattttatttagcacactattga 34084134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 124 - 300
Target Start/End: Original strand, 39771770 - 39771946
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||| ||||| | ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  39771770 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 39771869  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
     ||||||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||  ||||||||||||    
T  39771870 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgac 39771946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 124 - 310
Target Start/End: Complemental strand, 11018399 - 11018212
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||  |||||  |||||| |||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||| | ||||||||| |||    
T  11018399 catgggcggtttcaccgtccggcgactccgggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 11018300  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| |  |||||||||||||||||| |||||| ||||||||||    
T  11018299 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcagaattttatttagcacacaattgacgggttcatctc 11018212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 144 - 310
Target Start/End: Original strand, 45182981 - 45183148
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||| ||||||| | ||||||||| |||||||||||||||||||||||    
T  45182981 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 45183080  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    |||| |||||| |||||| ||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  45183081 atctgaaaattctcacacacaaataggtctcggaattttatttagcacactattgacgggttcatctc 45183148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 144 - 310
Target Start/End: Complemental strand, 6931061 - 6930894
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| |||||||  ||| ||||||| | |||||||||||||||||||||||||||| ||||    
T  6931061 ggcgaccccggacggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacatttacaaaaagaaaaatttaggca 6930962  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacg-gttcatctc 310  Q
    |||| |||||| |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||    
T  6930961 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 6930894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 127 - 310
Target Start/End: Complemental strand, 40081922 - 40081741
Alignment:
Q  127 gggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaa 226  Q
    ||||||||||||||||||||||| | ||  |||||||||||||| |||||||||||||| ||||||||||||| |||||||  |||||||||||||||||    
T  40081922 gggcggttctaccgtatggcgactctgga-ggtcgcccgggctcgatcgataatttttgaacattagactcaa-ccaaaagctcattaacacatttacaa 40081825  T
Q  227 aaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    ||||||||||||||||||| | ||||||||||||||||||||| | |||| ||||| ||||||||||||||||| ||||||||||    
T  40081824 aaagaaaaatttgggcaatttgaaaattgtcacacgcaaatagatcttgg-attttttttagcacactattgacgggttcatctc 40081741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 144 - 295
Target Start/End: Complemental strand, 19565668 - 19565517
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| | |||| ||||||||||||||||||||||||||||||||| ||    
T  19565668 ggcgatcccgggcggtcgcccgggttcaatcgataatttttgcacattagacccaaccaaaaaatccattaacacatttacaaaaagaaaaatttggaca 19565569  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacacta 295  Q
    |||| |||||| | |||||||||||||| | |||||||||||||||||||||    
T  19565568 atctgaaaattcttacacgcaaataggtctcggaattttatttagcacacta 19565517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 144 - 295
Target Start/End: Original strand, 45335875 - 45336025
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||| ||||||||||||||| ||||||||||||||||| |||||||||| ||| | ||||||| |||||||||||||||||||||||||| ||||||    
T  45335875 ggcgacctcgggcggtcgcccggactcaatcgataatttttacacattagacccaaccaaaaagtc-attaacacatttacaaaaagaaaaatctgggca 45335973  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacacta 295  Q
    |||| |||||| | |||||||||||||| |||||||||||||||||||||||    
T  45335974 atctgaaaattcttacacgcaaataggtcttggaattttatttagcacacta 45336025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 123 - 299
Target Start/End: Complemental strand, 6503757 - 6503581
Alignment:
Q  123 gcatgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattt 222  Q
    ||||||||||||  |||||  ||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| ||||||| | |||| |||| ||    
T  6503757 gcatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgattatttttgcaaattagactcaacccaaaagccaattagcacactt 6503658  T
Q  223 acaaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattga 299  Q
    ||||||||||||||||  ||||||| |||||| ||||| |||||||||| | ||| ||||||||||||||| |||||    
T  6503657 acaaaaagaaaaatttaagcaatctgaaaattctcacaggcaaataggtctcggatttttatttagcacacaattga 6503581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 143 - 310
Target Start/End: Original strand, 27935177 - 27935345
Alignment:
Q  143 tggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggc 242  Q
    |||| |||| |||| ||||||||||||| ||||||||||||||||||||| || ||| |||||||  |||||||||| ||||||||||||||||||||||    
T  27935177 tggcaaccctgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaacccaaaagctcattaacacacttacaaaaagaaaaatttgggc 27935276  T
Q  243 aatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    ||||| |||||| ||| ||| |||||||| | |||||||||||||||| ||||||||| ||||||||||    
T  27935277 aatctgaaaattctcatacgaaaataggtctcggaattttatttagcatactattgacgggttcatctc 27935345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 144 - 310
Target Start/End: Original strand, 33040953 - 33041120
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||||||||||||||| ||||||| || ||||||||||||| ||||||| ||| |||||||   ||||||||| |||||||||||||||||||  ||    
T  33040953 ggcgaccccgggcggtcgctcgggctcgattgataatttttgcatattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgaaca 33041052  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    || | |||||| |||||||||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  33041053 atttgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33041120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 144 - 310
Target Start/End: Original strand, 35514266 - 35514429
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||||||| |||||| |||||||| |||||||||||| ||| | ||||  ||| |||||||||||||||||||    ||||||||||||||||| ||    
T  35514266 ggcgaccccggacggtcgtccgggctcgatcgataattttcgcatactagatccaacccaaaagtccattaacaca----caaaaagaaaaatttggaca 35514361  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    || | |||||| |||| ||||||||||| | |||||||||||| ||||||||||||| ||||||||||    
T  35514362 atatgaaaattctcactcgcaaataggtctaggaattttattttgcacactattgacgggttcatctc 35514429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 22922141 - 22922212
Alignment:
Q  128 ggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaa 199  Q
    |||||||| |||||||||||| ||||||||||||| ||||||| |||||| |||||||||||||| ||||||    
T  22922141 ggcggttccaccgtatggcgatcccgggcggtcgctcgggctcgatcgatcatttttgcacattaaactcaa 22922212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 44254068 - 44254126
Alignment:
Q  63 tcccctaatgcaaaagacaatcctttgggttccaactccattcgtataaaagacatgga 121  Q
    |||||||| |||||||||||||||| ||||||||||||||||| || ||||||||||||    
T  44254068 tcccctaacgcaaaagacaatccttcgggttccaactccattcatagaaaagacatgga 44254126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 270
Target Start/End: Original strand, 5135291 - 5135397
Alignment:
Q  166 ggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggc--aatctaaaaattgtcacacgc 263  Q
    ||||| |||||| ||||||| ||||||||| ||| | |||||  |||||||||| |||||||||||||||||||| |  ||||  |||||| |||||| |    
T  5135291 ggctcgatcgattatttttgtacattagacccaacctaaaagctcattaacacacttacaaaaagaaaaatttggacaaaatccgaaaattctcacacac 5135390  T
Q  264 aaatagg 270  Q
    |||||||    
T  5135391 aaatagg 5135397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 5354709 - 5354758
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattag 193  Q
    ||||||||||||||||||||||||||| |||  |||||||  ||||||||    
T  5354709 ggcgaccccgggcggtcgcccgggctcgatccttaattttctcacattag 5354758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 6890998 - 6891035
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatt 181  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  6890998 ggcgacaccgggcggtcgcccgggctcgatcgataatt 6891035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 263 - 310
Target Start/End: Original strand, 22922214 - 22922262
Alignment:
Q  263 caaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    ||||||| | ||||||||||||||| |||||||||||| ||||||||||    
T  22922214 caaatagatcttggaattttatttaacacactattgacgggttcatctc 22922262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 4e-69; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 127 - 310
Target Start/End: Complemental strand, 29728570 - 29728386
Alignment:
Q  127 gggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaa 226  Q
    |||||||||||||||||||||||||||| |||||||||| |||| |||||||| ||||||||||||||||||| |||||||  |||||||||||||||||    
T  29728570 gggcggttctaccgtatggcgaccccggacggtcgcccgtgctcgatcgataaattttgcacattagactcaacccaaaagctcattaacacatttacaa 29728471  T
Q  227 aaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  29728470 aaagaaaaatttgggcaatctgaaaattgtgacacgcaaataggtcttcgaattttatttagcacactattgacgggttcatctc 29728386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 128 - 302
Target Start/End: Original strand, 15838270 - 15838443
Alignment:
Q  128 ggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaa 227  Q
    ||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||| |||||| | |||||||||||||||||||||| ||    
T  15838270 ggcggttctaccgtatggcgaccccgggcggtcacccgggctcgattgataatttttgcacattaaactcaaccaaaaagtccattaacacatttac-aa 15838368  T
Q  228 aagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg 302  Q
    |||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  15838369 aagaaaaatttgggcaatctgaaaattttcacacgcaaataggtcttggaattttatttagcacactattgacgg 15838443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 127 - 310
Target Start/End: Complemental strand, 3648978 - 3648794
Alignment:
Q  127 gggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaa 226  Q
    |||||||||||||||||||||| || || | ||||||||||||| ||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||    
T  3648978 gggcggttctaccgtatggcgatccgggacagtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaa 3648879  T
Q  227 aaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||    
T  3648878 aaagaaaattttgggcaatctgaaaattgtcacacgcaagtaggttttggaattttatttagcacactattgacgggttcatctc 3648794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 148 - 310
Target Start/End: Complemental strand, 16788188 - 16788025
Alignment:
Q  148 accccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatct 247  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||||    
T  16788188 accccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatct 16788089  T
Q  248 aaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
     |||| | |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  16788088 taaaactctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 16788025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 124 - 299
Target Start/End: Complemental strand, 34137012 - 34136837
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||| ||||  ||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||| |||    
T  34137012 catgggtggtttcaccgtctggcgaccccgagcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagtcaattaacacactta 34136913  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattga 299  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| | | ||||||||||||||||| |||||    
T  34136912 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttagcacacaattga 34136837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 144 - 299
Target Start/End: Original strand, 4404008 - 4404163
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| | ||||||| | |||||||||||||||||||||||    
T  4404008 ggcgaccccaggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacatacttacaaaaagaaaaatttgggca 4404107  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattga 299  Q
    ||||||||||| |||||||||||||||| | ||||||||||||||||||| |||||    
T  4404108 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 4404163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 124 - 300
Target Start/End: Original strand, 39914495 - 39914670
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    ||||| |||||| ||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||  ||||||||||||||    
T  39914495 catggacggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 39914594  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
     ||||| ||||||||||||||| | |||||||||||| | |||||||| |||||||||||||| |||||||||||||    
T  39914595 taaaaa-aaaaatttgggcaatttgaaaattgtcacaagtaaataggtcttggaattttatttggcacactattgac 39914670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 144 - 310
Target Start/End: Original strand, 23402108 - 23402275
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||||||||||||||||||||||| ||||||||| |||||| ||||||| ||| ||||||| | ||||||||| |||||||||||||||||||||||    
T  23402108 ggcgaccccgggcggtcgcccgggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 23402207  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    |||| |||||| |||||||||||||||| | | ||||||||||| |||||||||||| ||||||||||    
T  23402208 atctgaaaattctcacacgcaaataggtctcgaaattttatttaacacactattgactggttcatctc 23402275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 144 - 310
Target Start/End: Original strand, 36408551 - 36408718
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||| ||| ||||    
T  36408551 ggcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagatccaacccaaaagtccattaacacatttacaaaaagaaaatttttggca 36408650  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgacgg-ttcatctc 310  Q
    || | |||||| | |||||| ||||||| |  |||||||||||| |||||||||| ||| ||||||||    
T  36408651 atttgaaaattcttacacgctaataggtctcagaattttatttaacacactattgccggattcatctc 36408718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 166 - 298
Target Start/End: Original strand, 9877242 - 9877374
Alignment:
Q  166 ggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctaaaaattgtcacacgcaa 265  Q
    ||||| || |||||||||||||||||||||  || ||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| ||||| ||||    
T  9877242 ggctcgattgataatttttgcacattagacctaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacatgcaa 9877341  T
Q  266 ataggtattggaattttatttagcacactattg 298  Q
    |||||| | | ||||||||||||||||||||||    
T  9877342 ataggtctcgaaattttatttagcacactattg 9877374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 144 - 299
Target Start/End: Complemental strand, 2729363 - 2729208
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||||||| |  ||||||||||| ||||||||||| ||| |||||||||  ||| ||||    
T  2729363 ggcgaccccgggcggacgcccgggctcgatcgataatttttacacattaaatccaatccaaaagcccattaacacacttataaaaagaaattttttggca 2729264  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattga 299  Q
    || | |||| | ||| |||||||||||| |   |||||||||||||||||||||||    
T  2729263 atttgaaaactctcatacgcaaataggtctcaaaattttatttagcacactattga 2729208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 176 - 310
Target Start/End: Original strand, 42230971 - 42231104
Alignment:
Q  176 ataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattg 275  Q
    ||||||||||||||||| |  |||  |||||||||||||||||  ||||||||||||||||||||||||| | |||||| ||| | |||||||||| |      
T  42230971 ataatttttgcacattaaatccaactcaaaagtccattaacac--ttacaaaaagaaaaatttgggcaatttgaaaattctcatatgcaaataggtctca 42231068  T
Q  276 gaattttatttagcacactattgacgg-ttcatctc 310  Q
    ||||||||||||||||||||||||||| ||||||||    
T  42231069 gaattttatttagcacactattgacggattcatctc 42231104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 160 - 270
Target Start/End: Original strand, 3435285 - 3435397
Alignment:
Q  160 cgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggc--aatctaaaaattgtc 257  Q
    ||||||||||  |||||||||||||||||||||||| ||| ||||||  ||||||||||| ||||||||||||||||||||||  ||||| |||||| ||    
T  3435285 cgcccgggcttgatcgataatttttgcacattagacccaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaaaatctgaaaattctc 3435384  T
Q  258 acacgcaaatagg 270  Q
    | |||||||||||    
T  3435385 aaacgcaaatagg 3435397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 237
Target Start/End: Complemental strand, 40470637 - 40470567
Alignment:
Q  167 gctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatt 237  Q
    |||| |||||||||||||||||||||||| |||  |||||||||||||||||| ||| ||||| |||||||    
T  40470637 gctcgatcgataatttttgcacattagacccaaatcaaaagtccattaacacacttataaaaaaaaaaatt 40470567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 10397207 - 10397122
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaa 229  Q
    |||||| ||||||  |||||||||||||||||||||||| | ||||||||  |||| ||||||| | ||||||||| ||| |||||    
T  10397207 ggcgactccgggcactcgcccgggctcaatcgataatttcttcacattaggttcaacccaaaagccgattaacacagttaaaaaaa 10397122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 129; Significance: 9e-67; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 124 - 300
Target Start/End: Original strand, 17822 - 17998
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||||||||| ||||||||||| ||| ||| |||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  17822 catgggcggttctaccgtgtggcgaccccgagcgatcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 17921  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
    |||||||||||||||||||||||| |||||||||||| | |||||||| ||| ||||||||||||||||||||||||    
T  17922 caaaaagaaaaatttgggcaatctgaaaattgtcacatgtaaataggtcttgaaattttatttagcacactattgac 17998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 123 - 300
Target Start/End: Complemental strand, 480645 - 480468
Alignment:
Q  123 gcatgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattt 222  Q
    ||||||||||||| ||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||  |||||||||||||    
T  480645 gcatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattt 480546  T
Q  223 acaaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
    | ||||||||||||||||||||| | |||||||||||||| |||||||| |||||||||||||| |||||||||||||    
T  480545 ataaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 480468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2142 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 124 - 300
Target Start/End: Original strand, 502 - 678
Alignment:
Q  124 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacattta 223  Q
    |||||||||||| ||||| | |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||  ||||||||||||||    
T  502 catgggcggttccaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 601  T
Q  224 caaaaagaaaaatttgggcaatctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac 300  Q
     ||||||||||||||||||||| | |||||||||||||| |||||||| |||||||||||||| |||||||||||||    
T  602 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 144 - 310
Target Start/End: Original strand, 5230 - 5397
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||| | ||||||||| |||||||||||||| ||||||||    
T  5230 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 5329  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    |||| |||||| ||||| |||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  5330 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 5397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 144 - 310
Target Start/End: Original strand, 31480 - 31647
Alignment:
Q  144 ggcgaccccgggcggtcgcccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggca 243  Q
    ||||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||| ||||||| ||||||||||| |||||||||||||||||||| ||    
T  31480 ggcgaccccagacggtcgcccgggctcgatcgataatttttgcacactagacccaacccaaaagcccattaacacacttacaaaaagaaaaatttggaca 31579  T
Q  244 atctaaaaattgtcacacgcaaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    |||| |||||| |||| ||||||||||| | | |||||||||| ||||||||||||| ||||||||||    
T  31580 atctgaaaattctcactcgcaaataggtctagtaattttattttgcacactattgacaggttcatctc 31647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 52944 - 53092
Alignment:
Q  163 ccgggctcaatcgataatttttgcacattagactcaatccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctaaaaattgtcacacg 262  Q
    |||||||| ||||||||||||||||||||||| | || ||||||| | |||||||||||||||||||||||||||||| |||||| |||||| ||||| |    
T  52944 ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg 53043  T
Q  263 caaataggtattggaattttatttagcacactattgac-ggttcatctc 310  Q
    ||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  53044 caaataggtctcggaattttatttagcacactattgacgggttcatctc 53092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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