View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21553_high_69 (Length: 304)
Name: NF21553_high_69
Description: NF21553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21553_high_69 |
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Alignment Details
Target: chr4 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 16 - 256
Target Start/End: Original strand, 32620503 - 32620743
Alignment:
| Q |
16 |
ttaacattttcttctatttcattactaagagatgatggaatgagaaatgtacctatacatagcatgaaatagcttacaacatggatttacaatgactaca |
115 |
Q |
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| T |
32620503 |
ttaacattttcttctatttcattactaagtgatgatggaatgagaaatgtacctatacatagcatgaaatagcttacaacatggacttacaatgactaca |
32620602 |
T |
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| Q |
116 |
tcacctgttttagaaagatatatgctactgatcaaagaaatagttattttatttccttaataaaattaaaagt-agacatcttgcatttatcaagtattg |
214 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| |||||||||||||| |
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| T |
32620603 |
tcacctgttttagaaagacatatgctactgatcaaagaaatagtt-ttttatttccttaataaaattaaaaataagacatcttgcttttatcaagtattg |
32620701 |
T |
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| Q |
215 |
atggaagtccatagtattttatctgcacctcaaactgcttgg |
256 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||| |
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| T |
32620702 |
atggaagtccatggtattttatctgcacctcaaactgcttgg |
32620743 |
T |
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