View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21553_high_70 (Length: 301)

Name: NF21553_high_70
Description: NF21553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21553_high_70
NF21553_high_70
[»] chr8 (46 HSPs)
chr8 (1-287)||(40356753-40357039)
chr8 (46-102)||(35534948-35535004)
chr8 (48-102)||(6918266-6918320)
chr8 (46-102)||(14482129-14482185)
chr8 (15-98)||(42568711-42568792)
chr8 (63-102)||(1470943-1470982)
chr8 (51-98)||(4558730-4558777)
chr8 (63-102)||(31315540-31315579)
chr8 (36-102)||(34563167-34563233)
chr8 (48-102)||(38561655-38561709)
chr8 (208-263)||(12361227-12361279)
chr8 (9-102)||(41620378-41620471)
chr8 (49-98)||(42597331-42597380)
chr8 (46-102)||(20672699-20672755)
chr8 (50-98)||(26215427-26215475)
chr8 (15-102)||(26717153-26717238)
chr8 (46-102)||(29699181-29699237)
chr8 (46-102)||(35298565-35298621)
chr8 (46-102)||(39392748-39392804)
chr8 (42-85)||(8536152-8536195)
chr8 (46-77)||(31875671-31875702)
chr8 (36-98)||(7026648-7026710)
chr8 (64-102)||(8066928-8066966)
chr8 (46-100)||(8823482-8823536)
chr8 (31-85)||(30172743-30172797)
chr8 (62-99)||(7111216-7111253)
chr8 (50-95)||(10114421-10114466)
chr8 (46-103)||(10727124-10727181)
chr8 (47-96)||(11188248-11188297)
chr8 (35-101)||(14247318-14247386)
chr8 (49-102)||(14929203-14929256)
chr8 (49-102)||(38036199-38036252)
chr8 (36-92)||(1433462-1433518)
chr8 (46-102)||(3645903-3645959)
chr8 (180-240)||(5088859-5088919)
chr8 (50-98)||(7646137-7646185)
chr8 (46-102)||(10079150-10079206)
chr8 (46-102)||(11119086-11119142)
chr8 (17-102)||(11494049-11494136)
chr8 (46-102)||(14949815-14949871)
chr8 (50-98)||(21653012-21653060)
chr8 (46-102)||(34788514-34788570)
chr8 (42-98)||(35453714-35453770)
chr8 (46-98)||(40280296-40280348)
chr8 (46-98)||(40357826-40357878)
chr8 (46-102)||(40728505-40728561)
[»] chr4 (54 HSPs)
chr4 (17-101)||(969433-969517)
chr4 (21-102)||(24160582-24160663)
chr4 (41-102)||(47970240-47970301)
chr4 (14-102)||(7029318-7029406)
chr4 (15-102)||(19422314-19422401)
chr4 (22-102)||(37733902-37733982)
chr4 (46-100)||(8422926-8422980)
chr4 (15-101)||(30079474-30079560)
chr4 (46-100)||(51555956-51556010)
chr4 (46-102)||(4191666-4191723)
chr4 (43-96)||(41603484-41603537)
chr4 (102-142)||(492452-492492)
chr4 (46-102)||(7022595-7022651)
chr4 (50-102)||(9680595-9680647)
chr4 (102-142)||(18190113-18190153)
chr4 (48-95)||(28623218-28623265)
chr4 (51-102)||(51044546-51044597)
chr4 (48-102)||(1404351-1404405)
chr4 (42-99)||(23676639-23676697)
chr4 (30-100)||(25487634-25487704)
chr4 (16-102)||(51098212-51098298)
chr4 (36-102)||(54325124-54325190)
chr4 (49-98)||(20907103-20907152)
chr4 (49-102)||(21193928-21193981)
chr4 (51-99)||(4798649-4798697)
chr4 (46-98)||(5219591-5219643)
chr4 (28-96)||(30207663-30207731)
chr4 (46-102)||(36734820-36734876)
chr4 (47-102)||(4071811-4071865)
chr4 (15-82)||(9843773-9843840)
chr4 (50-101)||(36048731-36048781)
chr4 (67-102)||(41701528-41701563)
chr4 (40-99)||(44319871-44319929)
chr4 (40-102)||(6987828-6987890)
chr4 (15-97)||(14011130-14011212)
chr4 (36-102)||(19304845-19304911)
chr4 (63-101)||(19691351-19691389)
chr4 (63-101)||(19701936-19701974)
chr4 (51-101)||(21593099-21593149)
chr4 (17-102)||(27405946-27406034)
chr4 (202-240)||(29467627-29467665)
chr4 (165-239)||(35405939-35406013)
chr4 (48-94)||(40709475-40709521)
chr4 (48-97)||(4471100-4471149)
chr4 (57-98)||(6364087-6364128)
chr4 (47-96)||(7749175-7749224)
chr4 (49-102)||(27249701-27249754)
chr4 (37-102)||(32724037-32724102)
chr4 (17-81)||(7730513-7730577)
chr4 (46-102)||(22684603-22684659)
chr4 (46-98)||(30024627-30024679)
chr4 (46-98)||(41088311-41088363)
chr4 (50-102)||(42321966-42322018)
chr4 (50-102)||(50745931-50745983)
[»] chr3 (53 HSPs)
chr3 (15-99)||(48588561-48588645)
chr3 (51-102)||(20192693-20192744)
chr3 (36-102)||(38462198-38462264)
chr3 (15-101)||(41159005-41159091)
chr3 (15-99)||(4534445-4534530)
chr3 (38-102)||(39971238-39971302)
chr3 (46-101)||(41028939-41028994)
chr3 (47-102)||(49587003-49587057)
chr3 (22-96)||(25964345-25964419)
chr3 (17-102)||(25185891-25185975)
chr3 (42-102)||(12923412-12923472)
chr3 (102-142)||(13221683-13221723)
chr3 (46-102)||(16790443-16790499)
chr3 (46-102)||(22232753-22232809)
chr3 (46-102)||(44374731-44374787)
chr3 (39-99)||(49772758-49772818)
chr3 (46-101)||(905058-905113)
chr3 (47-102)||(33434094-33434148)
chr3 (15-94)||(44237389-44237468)
chr3 (52-102)||(1395604-1395654)
chr3 (46-96)||(16790181-16790231)
chr3 (15-80)||(24158611-24158676)
chr3 (15-96)||(48528474-48528555)
chr3 (50-94)||(2304336-2304380)
chr3 (15-102)||(23793482-23793571)
chr3 (46-102)||(27792799-27792855)
chr3 (42-98)||(31075617-31075673)
chr3 (46-102)||(32703065-32703121)
chr3 (209-275)||(52323865-52323928)
chr3 (51-102)||(3757980-3758031)
chr3 (36-95)||(20173982-20174041)
chr3 (63-102)||(48397590-48397629)
chr3 (56-98)||(35394792-35394834)
chr3 (51-101)||(49546575-49546625)
chr3 (46-102)||(1816509-1816566)
chr3 (49-98)||(31364831-31364880)
chr3 (17-102)||(32064338-32064423)
chr3 (41-102)||(33307667-33307728)
chr3 (57-102)||(40122839-40122884)
chr3 (51-100)||(42039091-42039140)
chr3 (46-95)||(47217284-47217333)
chr3 (58-98)||(2128342-2128382)
chr3 (206-264)||(20192588-20192643)
chr3 (62-102)||(31615591-31615631)
chr3 (102-138)||(32900654-32900690)
chr3 (50-102)||(36101499-36101551)
chr3 (50-102)||(36139809-36139861)
chr3 (180-240)||(36646385-36646445)
chr3 (46-102)||(44284145-44284201)
chr3 (58-102)||(48323760-48323804)
chr3 (46-102)||(51278244-51278300)
chr3 (52-96)||(52413214-52413258)
chr3 (46-102)||(54775055-54775111)
[»] chr1 (55 HSPs)
chr1 (47-102)||(46499941-46499996)
chr1 (15-100)||(41638399-41638484)
chr1 (46-102)||(45107550-45107605)
chr1 (15-101)||(24702157-24702243)
chr1 (42-91)||(13037787-13037836)
chr1 (46-101)||(870972-871027)
chr1 (36-102)||(4363719-4363784)
chr1 (49-99)||(7120080-7120130)
chr1 (40-101)||(4200150-4200211)
chr1 (16-101)||(4202217-4202302)
chr1 (46-102)||(48282060-48282117)
chr1 (46-102)||(7200929-7200985)
chr1 (42-102)||(18434565-18434625)
chr1 (46-102)||(23895263-23895319)
chr1 (15-91)||(29046011-29046087)
chr1 (46-102)||(36641802-36641858)
chr1 (46-102)||(42550168-42550224)
chr1 (50-102)||(45999375-45999427)
chr1 (54-102)||(49167031-49167079)
chr1 (57-101)||(50319230-50319274)
chr1 (47-102)||(289168-289223)
chr1 (63-98)||(8795060-8795095)
chr1 (46-101)||(18011831-18011886)
chr1 (39-102)||(30259574-30259637)
chr1 (47-98)||(45170415-45170466)
chr1 (52-102)||(1730825-1730875)
chr1 (202-240)||(3244928-3244966)
chr1 (20-70)||(4180714-4180764)
chr1 (64-102)||(35017519-35017557)
chr1 (202-240)||(35925719-35925757)
chr1 (54-96)||(37591367-37591409)
chr1 (46-96)||(40304147-40304197)
chr1 (56-98)||(43722406-43722448)
chr1 (40-98)||(49557062-49557120)
chr1 (50-91)||(15942264-15942305)
chr1 (50-99)||(17420134-17420183)
chr1 (51-96)||(33759502-33759547)
chr1 (46-99)||(38651499-38651552)
chr1 (65-98)||(44251364-44251397)
chr1 (46-91)||(49560657-49560702)
chr1 (17-98)||(52286576-52286657)
chr1 (58-98)||(1393110-1393150)
chr1 (50-98)||(4549797-4549845)
chr1 (50-102)||(6933048-6933100)
chr1 (46-102)||(7274026-7274082)
chr1 (57-101)||(15942835-15942879)
chr1 (46-102)||(17269177-17269233)
chr1 (42-102)||(18420941-18421001)
chr1 (15-98)||(30815726-30815810)
chr1 (22-98)||(33339511-33339587)
chr1 (58-102)||(36151592-36151636)
chr1 (46-102)||(36602717-36602773)
chr1 (49-97)||(42397693-42397741)
chr1 (46-102)||(44032086-44032142)
chr1 (70-102)||(45234148-45234180)
[»] scaffold0024 (2 HSPs)
scaffold0024 (15-96)||(23807-23888)
scaffold0024 (46-102)||(27503-27559)
[»] chr2 (57 HSPs)
chr2 (22-95)||(10150658-10150731)
chr2 (36-101)||(33197327-33197392)
chr2 (31-102)||(17952788-17952859)
chr2 (46-102)||(31461365-31461421)
chr2 (50-101)||(25609727-25609778)
chr2 (36-102)||(35755589-35755655)
chr2 (36-102)||(39557748-39557814)
chr2 (50-98)||(4026748-4026796)
chr2 (38-102)||(11344371-11344435)
chr2 (46-102)||(11393453-11393509)
chr2 (46-102)||(11410114-11410170)
chr2 (16-80)||(26484193-26484257)
chr2 (46-102)||(28803593-28803649)
chr2 (55-103)||(32098394-32098442)
chr2 (40-99)||(13864571-13864630)
chr2 (51-101)||(5045245-5045295)
chr2 (48-102)||(28933753-28933807)
chr2 (46-99)||(37845442-37845495)
chr2 (46-103)||(38239637-38239694)
chr2 (180-240)||(1939335-1939395)
chr2 (46-102)||(3102620-3102676)
chr2 (50-102)||(10143103-10143155)
chr2 (206-264)||(12215840-12215895)
chr2 (46-98)||(18962129-18962181)
chr2 (50-102)||(28677739-28677791)
chr2 (50-102)||(34054988-34055040)
chr2 (36-100)||(34339040-34339104)
chr2 (46-102)||(35459837-35459893)
chr2 (50-102)||(36852396-36852448)
chr2 (34-102)||(37053509-37053577)
chr2 (46-102)||(37766725-37766781)
chr2 (43-98)||(3673731-3673786)
chr2 (47-98)||(5998793-5998844)
chr2 (39-102)||(27288553-27288616)
chr2 (55-97)||(5133708-5133750)
chr2 (46-96)||(10190206-10190256)
chr2 (46-100)||(10198567-10198621)
chr2 (206-240)||(10285893-10285927)
chr2 (51-101)||(27237947-27237997)
chr2 (206-240)||(34652039-34652073)
chr2 (202-240)||(41042025-41042063)
chr2 (15-92)||(7936922-7936999)
chr2 (57-94)||(8820368-8820405)
chr2 (57-102)||(9551517-9551562)
chr2 (36-97)||(11393747-11393808)
chr2 (36-97)||(11410408-11410469)
chr2 (203-240)||(32615951-32615988)
chr2 (57-102)||(37033982-37034027)
chr2 (51-92)||(41033047-41033088)
chr2 (70-103)||(43199194-43199227)
chr2 (50-99)||(44443251-44443300)
chr2 (48-97)||(44606180-44606229)
chr2 (36-100)||(1899817-1899881)
chr2 (46-102)||(9478226-9478282)
chr2 (46-102)||(16946969-16947025)
chr2 (46-102)||(17017634-17017690)
chr2 (50-98)||(36114350-36114398)
[»] scaffold0590 (1 HSPs)
scaffold0590 (46-102)||(1161-1217)
[»] scaffold0275 (1 HSPs)
scaffold0275 (46-102)||(2758-2814)
[»] chr6 (64 HSPs)
chr6 (46-102)||(2514629-2514685)
chr6 (42-102)||(4248881-4248941)
chr6 (38-102)||(9027496-9027560)
chr6 (30-102)||(34405016-34405088)
chr6 (49-102)||(22742296-22742349)
chr6 (18-95)||(27889937-27890014)
chr6 (46-102)||(3217277-3217333)
chr6 (15-102)||(10400165-10400252)
chr6 (18-93)||(5564225-5564300)
chr6 (50-96)||(323527-323573)
chr6 (49-98)||(781315-781364)
chr6 (15-80)||(2732338-2732403)
chr6 (31-96)||(3169338-3169403)
chr6 (47-100)||(33259744-33259797)
chr6 (50-102)||(5551394-5551445)
chr6 (46-98)||(7351699-7351751)
chr6 (46-102)||(8420284-8420340)
chr6 (22-102)||(8470075-8470155)
chr6 (46-102)||(10452447-10452503)
chr6 (14-98)||(11340716-11340799)
chr6 (46-102)||(24774685-24774741)
chr6 (18-78)||(27984057-27984117)
chr6 (46-102)||(28531628-28531684)
chr6 (36-96)||(28660180-28660240)
chr6 (46-102)||(29274316-29274372)
chr6 (15-101)||(30817654-30817742)
chr6 (9-101)||(281936-282032)
chr6 (15-102)||(4006610-4006697)
chr6 (22-101)||(8010260-8010338)
chr6 (206-287)||(8420156-8420234)
chr6 (47-102)||(9732404-9732459)
chr6 (46-101)||(21959655-21959710)
chr6 (49-92)||(31461608-31461651)
chr6 (46-93)||(31668781-31668828)
chr6 (46-96)||(1810393-1810443)
chr6 (46-92)||(4247731-4247777)
chr6 (206-240)||(9667988-9668022)
chr6 (48-102)||(24836286-24836340)
chr6 (40-102)||(26564888-26564949)
chr6 (36-97)||(27727165-27727227)
chr6 (48-102)||(31420887-31420941)
chr6 (52-94)||(33416318-33416360)
chr6 (65-102)||(2027493-2027530)
chr6 (46-99)||(3204632-3204685)
chr6 (49-102)||(20671952-20672005)
chr6 (52-101)||(29940729-29940778)
chr6 (47-100)||(33385464-33385517)
chr6 (50-98)||(264302-264350)
chr6 (50-102)||(323742-323794)
chr6 (46-101)||(740953-741011)
chr6 (22-102)||(1345172-1345252)
chr6 (46-94)||(4325403-4325451)
chr6 (58-102)||(4420556-4420600)
chr6 (46-102)||(5328901-5328957)
chr6 (46-102)||(7713952-7714008)
chr6 (15-99)||(9668075-9668159)
chr6 (46-102)||(9833184-9833240)
chr6 (46-102)||(10154148-10154204)
chr6 (56-96)||(24745366-24745406)
chr6 (46-102)||(29269823-29269879)
chr6 (180-240)||(31583686-31583746)
chr6 (46-98)||(32386190-32386242)
chr6 (48-92)||(32843412-32843456)
chr6 (46-102)||(32975905-32975961)
[»] chr7 (49 HSPs)
chr7 (36-102)||(3610827-3610893)
chr7 (55-102)||(3501053-3501100)
chr7 (23-102)||(35536011-35536090)
chr7 (48-102)||(28340931-28340985)
chr7 (17-102)||(5276122-5276207)
chr7 (46-102)||(7244629-7244685)
chr7 (46-102)||(8445213-8445269)
chr7 (46-102)||(24973871-24973927)
chr7 (46-102)||(31341121-31341177)
chr7 (16-96)||(39549359-39549439)
chr7 (15-102)||(27121673-27121759)
chr7 (14-101)||(29574689-29574776)
chr7 (15-102)||(39539848-39539935)
chr7 (26-96)||(5005900-5005970)
chr7 (36-102)||(9527177-9527243)
chr7 (48-98)||(15328535-15328585)
chr7 (46-99)||(5373152-5373205)
chr7 (46-95)||(33894550-33894599)
chr7 (57-102)||(42656453-42656498)
chr7 (46-99)||(46213730-46213783)
chr7 (38-95)||(47134837-47134894)
chr7 (58-102)||(1417203-1417247)
chr7 (46-102)||(3241368-3241424)
chr7 (50-102)||(5269461-5269513)
chr7 (36-92)||(22388001-22388057)
chr7 (46-102)||(45593806-45593862)
chr7 (46-102)||(47004014-47004070)
chr7 (46-102)||(49060467-49060523)
chr7 (63-102)||(3802226-3802265)
chr7 (36-99)||(27548180-27548243)
chr7 (50-101)||(30133980-30134031)
chr7 (54-101)||(45813268-45813315)
chr7 (15-85)||(5369793-5369863)
chr7 (47-97)||(7513562-7513612)
chr7 (12-98)||(21853207-21853293)
chr7 (202-240)||(27496410-27496448)
chr7 (202-240)||(27503068-27503106)
chr7 (210-240)||(29290370-29290400)
chr7 (52-102)||(35808991-35809041)
chr7 (49-102)||(2223078-2223131)
chr7 (63-100)||(28178913-28178950)
chr7 (50-102)||(1423077-1423129)
chr7 (46-102)||(1431395-1431451)
chr7 (180-240)||(24363604-24363664)
chr7 (50-102)||(30496635-30496687)
chr7 (180-240)||(39334200-39334260)
chr7 (180-240)||(39345478-39345538)
chr7 (209-263)||(45078314-45078365)
chr7 (36-96)||(47528026-47528086)
[»] chr5 (48 HSPs)
chr5 (36-102)||(6738494-6738560)
chr5 (15-101)||(11095557-11095643)
chr5 (46-102)||(7096214-7096270)
chr5 (42-102)||(37063161-37063221)
chr5 (36-95)||(10391270-10391329)
chr5 (46-101)||(20982223-20982278)
chr5 (32-102)||(35095870-35095940)
chr5 (16-100)||(40499764-40499848)
chr5 (15-98)||(4855594-4855677)
chr5 (36-95)||(29588797-29588856)
chr5 (47-102)||(35135749-35135804)
chr5 (17-92)||(36638644-36638719)
chr5 (56-98)||(11054123-11054165)
chr5 (46-96)||(13224356-13224406)
chr5 (46-96)||(26516225-26516275)
chr5 (48-102)||(39128568-39128622)
chr5 (48-93)||(3951890-3951935)
chr5 (46-102)||(24084825-24084881)
chr5 (36-100)||(29115302-29115366)
chr5 (14-102)||(29117017-29117105)
chr5 (102-142)||(34655779-34655819)
chr5 (46-102)||(35960341-35960397)
chr5 (41-101)||(36539668-36539728)
chr5 (43-87)||(37611293-37611337)
chr5 (43-87)||(37788023-37788067)
chr5 (52-100)||(38829724-38829772)
chr5 (63-102)||(10363108-10363147)
chr5 (63-102)||(11615452-11615491)
chr5 (47-98)||(19460050-19460101)
chr5 (56-98)||(12425508-12425550)
chr5 (17-71)||(34198333-34198387)
chr5 (46-100)||(34690801-34690855)
chr5 (49-94)||(706393-706438)
chr5 (25-98)||(12407752-12407824)
chr5 (49-94)||(16945076-16945121)
chr5 (70-98)||(8481169-8481197)
chr5 (50-98)||(9202839-9202887)
chr5 (46-94)||(11684350-11684398)
chr5 (46-102)||(28586853-28586909)
chr5 (50-98)||(28776906-28776954)
chr5 (46-102)||(29014683-29014739)
chr5 (202-238)||(29590634-29590670)
chr5 (46-102)||(31694445-31694501)
chr5 (40-92)||(38819672-38819724)
chr5 (58-102)||(38831543-38831587)
chr5 (46-102)||(39257473-39257529)
chr5 (70-102)||(39823208-39823240)
chr5 (50-98)||(40048371-40048419)
[»] scaffold0654 (1 HSPs)
scaffold0654 (14-102)||(6724-6813)
[»] scaffold0014 (1 HSPs)
scaffold0014 (14-102)||(116643-116732)
[»] scaffold0060 (1 HSPs)
scaffold0060 (46-102)||(63372-63428)
[»] scaffold0002 (1 HSPs)
scaffold0002 (102-142)||(185024-185064)
[»] scaffold0549 (2 HSPs)
scaffold0549 (14-98)||(1815-1898)
scaffold0549 (14-98)||(3905-3988)
[»] scaffold0085 (1 HSPs)
scaffold0085 (46-102)||(34084-34140)
[»] scaffold0349 (1 HSPs)
scaffold0349 (36-97)||(5744-5806)
[»] scaffold0428 (1 HSPs)
scaffold0428 (47-100)||(3832-3885)
[»] scaffold0352 (1 HSPs)
scaffold0352 (43-92)||(10987-11036)
[»] scaffold0110 (1 HSPs)
scaffold0110 (46-102)||(4310-4367)
[»] scaffold0100 (1 HSPs)
scaffold0100 (46-94)||(42544-42592)
[»] scaffold0072 (1 HSPs)
scaffold0072 (46-102)||(4899-4955)


Alignment Details
Target: chr8 (Bit Score: 283; Significance: 1e-158; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 40356753 - 40357039
Alignment:
Q  1 aatgaactagacattgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40356753 aatgaactagacattgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtca 40356852  T
Q  101 aagctaaaaccaaactaccgaattagaaaaatggagtgctatcatatagttttatatcatcttgatataaactctaggatgttttcaaaagctatccagt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40356853 aagctaaaaccaaactaccgaattagaaaaatggagtgctatcatatagttttatatcatcttgatataaactctaggatgttttcaaaagctatccagt 40356952  T
Q  201 cgagtttatggaaatatgttgaaaacagcttatggacatggtgtcataagctatttcaataagccctcataaacaatctctcaagtg 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40356953 cgagtttatggaaatatgttgaaaacagcttatggacatggtgtcataagctatttcaataagccctcataaacaatctctgaagtg 40357039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 35535004 - 35534948
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||    
T  35535004 tcatataagtgcttatatataagctatttctataataaaagttaaaataaagtcaaa 35534948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 6918320 - 6918266
Alignment:
Q  48 atataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  6918320 atataagtgtttgtatataagctatttatataataaaagataaaataaagtcaaa 6918266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 14482129 - 14482185
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||| ||||| |||||| ||||| |||||||||||||||||||||    
T  14482129 tcatataagtgcttatgtataaactatttctataacaaaagataaaataaagtcaaa 14482185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 42568711 - 42568792
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||| |||||||||||||| |||||||| |||||||||  ||||  |||||||||||| || || | |||||||||||||||    
T  42568711 tgtttggataaacaacttaatcaaacacttatcatataagcactta--tataagctatttctaaaacagaagataaaataaagt 42568792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 1470982 - 1470943
Alignment:
Q  63 tataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  1470982 tataagctatttctataataaaagataaaataaagtcaaa 1470943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 4558730 - 4558777
Alignment:
Q  51 taagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||| |||| |||||||||||| |||||||||||||||||||||||    
T  4558730 taagtgtttatgtataagctatttctataataaaagataaaataaagt 4558777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 31315579 - 31315540
Alignment:
Q  63 tataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  31315579 tataagctatttttataataaaagataaaataaagtcaaa 31315540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 34563167 - 34563233
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||| || |||||||||||||||| |||||| ||||| ||| | ||| |||||||||||||||||    
T  34563167 taaacatttatcatataagtgcttatatataagttatttctatgacaaaggataaaataaagtcaaa 34563233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 38561655 - 38561709
Alignment:
Q  48 atataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||  ||| |||||| ||||||||||| |||||||||||||||||||||    
T  38561655 atataagtgtctatatataagttatttatataacaaaagataaaataaagtcaaa 38561709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 12361227 - 12361279
Alignment:
Q  208 atggaaatatgttgaaaacagcttatggacatggtgtcataagctatttcaataag 263  Q
    ||||||||| |||||||||||||||||||||   |||||||||||||||| |||||    
T  12361227 atggaaataagttgaaaacagcttatggaca---tgtcataagctatttctataag 12361279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 41620471 - 41620378
Alignment:
Q  9 agacattgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| ||||||| |||||||| | ||||||    || ||||| |||||||||| |||||| ||||| | ||| |||||||||||||||||||||    
T  41620471 agaccttgtttggataaacaaatcaattaagtggttatcatacaagtgcttatatataagttatttttgtaacaaaagataaaataaagtcaaa 41620378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 42597331 - 42597380
Alignment:
Q  49 tataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    ||||||| ||||| |||||||||||| ||||| |||||||||||||||||    
T  42597331 tataagtacttatgtataagctatttctataacaaaagataaaataaagt 42597380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 20672699 - 20672755
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||| | || ||  ||||||||| |||||||||||||||||||||    
T  20672699 tcatataagtgcttatgtgtatgccctttatataacaaaagataaaataaagtcaaa 20672755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 26215427 - 26215475
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    ||||| |||||| |||||||||||| ||||| |||||||||||||||||    
T  26215427 ataagcgcttatgtataagctatttctataacaaaagataaaataaagt 26215475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 26717153 - 26717238
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||| || |||| ||||||||| ||||| |||||||||||||| |  |||||||| || ||||  | |||||||||||||||||||    
T  26717153 tgtttggatcaacagcttaattaagcacttatcatataagtgcttctgaataagctaattttata--acaagataaaataaagtcaaa 26717238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 29699181 - 29699237
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||| ||||||| || ||| ||||| ||||| |||||||||||||||||||||    
T  29699181 tcatataaatgcttatgtacaagttatttctataacaaaagataaaataaagtcaaa 29699237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 35298621 - 35298565
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||| ||||||||||||   ||| |||||||||||||||| ||||    
T  35298621 tcatataagtgcttatgtataagctatttcagtaacaaaagataaaataaagccaaa 35298565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 39392804 - 39392748
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||  ||| ||||| |||||| ||||| |||||||||||||||||||||    
T  39392804 tcatataagtggctatgtataaactatttctataacaaaagataaaataaagtcaaa 39392748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 8536195 - 8536152
Alignment:
Q  42 cttgtcatataagtgcttatctataagctatttatataataaaa 85  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||    
T  8536195 cttgtcatataagtgcttatgtataagctatttctataacaaaa 8536152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 77
Target Start/End: Complemental strand, 31875702 - 31875671
Alignment:
Q  46 tcatataagtgcttatctataagctatttata 77  Q
    ||||||||||||||||||||||||||||||||    
T  31875702 tcatataagtgcttatctataagctatttata 31875671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 7026648 - 7026710
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||| || ||||||||||||||||  |||||||| |  ||||| |||||||||||||||||    
T  7026648 taaacatttatcatataagtgcttatgcataagctactgttataacaaaagataaaataaagt 7026710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 102
Target Start/End: Complemental strand, 8066966 - 8066928
Alignment:
Q  64 ataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  8066966 ataagctgtttatataacaaaagataaaataaagtcaaa 8066928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 8823536 - 8823482
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtca 100  Q
    |||| ||||||||||| ||||||| |||| ||||| ||||||||||| |||||||    
T  8823536 tcatttaagtgcttatatataagccatttctataacaaaagataaaacaaagtca 8823482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 30172797 - 30172743
Alignment:
Q  31 ttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaa 85  Q
    |||||||| ||||| ||||| |||||||||| ||||||||||||  |||||||||    
T  30172797 ttaattaagcacttatcatacaagtgcttatgtataagctattttgataataaaa 30172743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 7111216 - 7111253
Alignment:
Q  62 ctataagctatttatataataaaagataaaataaagtc 99  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  7111216 ctataagctatttttatattaaaagataaaataaagtc 7111253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 10114421 - 10114466
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataa 95  Q
    |||||||||||| |||||||||||| ||||  ||||||||||||||    
T  10114421 ataagtgcttatgtataagctatttctatagcaaaagataaaataa 10114466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 10727124 - 10727181
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaag 103  Q
    ||||||||||||||||  ||||||||||| ||||  ||||||| ||||||| ||||||    
T  10727124 tcatataagtgcttatgcataagctatttctatagcaaaagatgaaataaattcaaag 10727181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 11188297 - 11188248
Alignment:
Q  47 catataagtgcttatctataagctatttatataataaaagataaaataaa 96  Q
    ||||||||||||||| |||||| | ||| ||||| |||||||||||||||    
T  11188297 catataagtgcttatgtataagttgtttctataacaaaagataaaataaa 11188248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 14247386 - 14247318
Alignment:
Q  35 ttaaacacttgtcatataagtgcttatctataagc--tatttatataataaaagataaaataaagtcaa 101  Q
    |||||| ||| |||||||||||||||| ||||| |  | |||||| || ||||||||||||||||||||    
T  14247386 ttaaacgcttatcatataagtgcttatgtataaactgtttttataaaaaaaaagataaaataaagtcaa 14247318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 14929256 - 14929203
Alignment:
Q  49 tataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||||   ||||||||||| |||||||||||| |||||| |||||||    
T  14929256 tataagtgcttacgcataagctatttctataataaaagacaaaatagagtcaaa 14929203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 38036252 - 38036199
Alignment:
Q  49 tataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||||| ||||| |||||||| ||| |||| |||||||||| |||||    
T  38036252 tataagtgcttatgtataaactatttatttaacaaaaaataaaataaattcaaa 38036199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 1433462 - 1433518
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaa 92  Q
    |||| |||| ||||||||||| |||| |||||| ||||| |||||||||||| ||||    
T  1433462 taaatacttatcatataagtggttatgtataagttatttctataataaaagaaaaaa 1433518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 3645959 - 3645903
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||| | |||||||||||| ||||| |||| |||||| ||| |||||    
T  3645959 tcatataagtgcttgtgtataagctatttctataagaaaatataaaacaaaatcaaa 3645903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 5088859 - 5088919
Alignment:
Q  180 tgttttcaaaagctatccagtcgagtttatggaaatatgttgaaaacagcttatggacatg 240  Q
    |||||||| |||| |||| |  ||| |||| |||||| |||||||||||||||||||||||    
T  5088859 tgttttcacaagcgatcctggagagcttattgaaataagttgaaaacagcttatggacatg 5088919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 7646137 - 7646185
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    ||||||| |||| |||||||||||| ||||| ||||| |||||||||||    
T  7646137 ataagtggttatgtataagctatttctataagaaaaggtaaaataaagt 7646185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 10079206 - 10079150
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||  ||||||| |||| ||||||| ||| |||||||||||||| ||||||||    
T  10079206 tcatatacatgcttatttataggctatttctatgataaaagataaaatgaagtcaaa 10079150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 11119142 - 11119086
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||  |||||| |||| | ||||| ||||| |||||||||||||||||||||    
T  11119142 tcatataatcgcttatgtatacgatatttctataacaaaagataaaataaagtcaaa 11119086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11494049 - 11494136
Alignment:
Q  17 tttgaataaacaacttaattaaaca--cttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| |||||||||||||||| | |  ||| |||||||||||||| | |||| | |||||  |||| ||||||||| |||||||||||    
T  11494049 tttggataaacaacttaattataaatgcttatcatataagtgcttttgtatatgttattttcataacaaaagataacataaagtcaaa 11494136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 14949815 - 14949871
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||| |||| ||||| ||||||||| || ||||| ||||||||||||| |||||||    
T  14949815 tcatacaagttcttatgtataagctacttctataacaaaagataaaatagagtcaaa 14949871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 21653012 - 21653060
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    ||||| |||||| |||| ||||||||| ||| |||||||||||||||||    
T  21653012 ataagcgcttatgtataggctatttatgtaacaaaagataaaataaagt 21653060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 34788570 - 34788514
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||| ||||||  |||||||||||| ||| |  ||||||||||||||||||||    
T  34788570 tcatataaatgcttacgtataagctatttttatgaccaaagataaaataaagtcaaa 34788514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 35453770 - 35453714
Alignment:
Q  42 cttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||||||||||| ||||| ||||| || ||| || || |||||||||||||||||    
T  35453770 cttgtcatataagtacttatatataatctgtttctacaacaaaagataaaataaagt 35453714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 40280348 - 40280296
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||||||||| ||| |||||| ||||| || || |||||||||||||||||    
T  40280348 tcatataagtgcctatatataagttatttctacaacaaaagataaaataaagt 40280296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 40357826 - 40357878
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    ||||||||||  |||| |||||||| || |||||| |||||||||||||||||    
T  40357826 tcatataagtatttatgtataagctcttgatataacaaaagataaaataaagt 40357878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 40728561 - 40728505
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||| | ||  ||||| ||||| ||||| |||||||||||||||||||||    
T  40728561 tcatataagtgttcatgcataagttatttctataacaaaagataaaataaagtcaaa 40728505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 969517 - 969433
Alignment:
Q  17 tttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    |||| |||||||||||||| || | ||| |||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||    
T  969517 tttggataaacaacttaatcaagcgcttatcatataagtgcttatctataagcaatttctataataaaaggtaaaataaagtcaa 969433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 24160663 - 24160582
Alignment:
Q  21 aataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||||||| ||| ||||||||||||||||  ||||||| ||| ||||| ||||||||| ||||| |||||    
T  24160663 aataaacaacttaattaaacgcttatcatataagtgcttataaataagctttttctataacaaaagataatataaattcaaa 24160582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 47970240 - 47970301
Alignment:
Q  41 acttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||||||||||||| |||||||||||| ||||| |||||||||||| ||||||||    
T  47970240 acttgtcatataagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaaa 47970301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 7029318 - 7029406
Alignment:
Q  14 ttgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||| |||||||| |||||||||| ||| |||||||| ||||||  | |||||||||| ||||| ||||||||||||| |||||||    
T  7029318 ttgtttggataaacaaattaattaaactcttctcatataactgcttaattgtaagctatttctataagaaaagataaaatagagtcaaa 7029406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 19422314 - 19422401
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||| ||||||| ||||||||| | ||| |||||||| ||||||| |||||| ||||| ||||| |||||||| ||||||||||||    
T  19422314 tgtttggataaacagcttaattaagcgcttatcatataaatgcttatgtataagttatttctataacaaaagatataataaagtcaaa 19422401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 37733902 - 37733982
Alignment:
Q  22 ataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||||||||| | ||||||| |||||| ||||| |||||||||||| ||||  || ||||| ||||||||||||    
T  37733902 ataaacaacttaattaagcgcttgtcaaataagtacttatttataagctatttctatagcaagagatacaataaagtcaaa 37733982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 8422980 - 8422926
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtca 100  Q
    ||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||    
T  8422980 tcatatatgtgcttatgtataagctatttttataaaaaaagataaaataaagtca 8422926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 30079560 - 30079474
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    |||||| |||||||||||||||||   ||| |||| ||||||||||  ||||||||||||||||   ||||| ||||||||||||||    
T  30079560 tgtttggataaacaacttaattaagtccttatcatgtaagtgcttaagtataagctatttatatctcaaaaggtaaaataaagtcaa 30079474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 51556010 - 51555956
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtca 100  Q
    |||||||||||||||| |||||||||||  ||||| |||||||||||||||||||    
T  51556010 tcatataagtgcttatgtataagctattattataacaaaagataaaataaagtca 51555956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 4191666 - 4191723
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagat-aaaataaagtcaaa 102  Q
    |||||||||||||||| |||||||||||| ||||| ||||||| ||||||||||||||    
T  4191666 tcatataagtgcttatgtataagctatttctataacaaaagataaaaataaagtcaaa 4191723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 41603537 - 41603484
Alignment:
Q  43 ttgtcatataagtgcttatctataagctatttatataataaaagataaaataaa 96  Q
    ||||||||||||||||||| |||||||||||||||||| | |||| ||||||||    
T  41603537 ttgtcatataagtgcttatgtataagctatttatataacataagaaaaaataaa 41603484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 492492 - 492452
Alignment:
Q  102 agctaaaaccaaactaccgaattagaaaaatggagtgctat 142  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  492492 agctaaaaccaaactaccgaattggaaaaatggagtgctat 492452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 7022595 - 7022651
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||  |||||||||||| ||||| ||||||||||||| |||||||    
T  7022595 tcatataagtgcttaattataagctatttttataagaaaagataaaatagagtcaaa 7022651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 9680595 - 9680647
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| ||||||| ||||||||||||  ||||||||||||||||||||||||||    
T  9680595 ataaatgcttatgtataagctatttcgataataaaagataaaataaagtcaaa 9680647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 18190153 - 18190113
Alignment:
Q  102 agctaaaaccaaactaccgaattagaaaaatggagtgctat 142  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  18190153 agctaaaaccaaactaccgaattggaaaaatggagtgctat 18190113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 28623218 - 28623265
Alignment:
Q  48 atataagtgcttatctataagctatttatataataaaagataaaataa 95  Q
    |||||||||||||| |||||| ||||||||||| ||||||||||||||    
T  28623218 atataagtgcttatgtataagttatttatataacaaaagataaaataa 28623265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 51044597 - 51044546
Alignment:
Q  51 taagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||| |||| |||||||||||| ||||| |||||||||||||||||||||    
T  51044597 taagtgtttatgtataagctatttctataacaaaagataaaataaagtcaaa 51044546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 1404351 - 1404405
Alignment:
Q  48 atataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||| ||||| | |||||||||||| |||||||||||||||||||| ||||||    
T  1404351 atataaatgcttttttataagctatttctataataaaagataaaataaggtcaaa 1404405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 23676639 - 23676697
Alignment:
Q  42 cttgtcatataagtgcttatctataagctatttatataat-aaaagataaaataaagtc 99  Q
    |||||||||||||||||| | ||||| ||||||||| ||| ||||||||||||||||||    
T  23676639 cttgtcatataagtgcttttgtataatctatttatacaataaaaagataaaataaagtc 23676697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 25487704 - 25487634
Alignment:
Q  30 cttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtca 100  Q
    ||||||||| ||||| || | ||| ||||||| |||||||||||| ||||| |||| ||||||||||||||    
T  25487704 cttaattaagcacttatcctttaaatgcttatgtataagctatttctataacaaaaaataaaataaagtca 25487634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 51098212 - 51098298
Alignment:
Q  16 gtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||| ||||||||||||||||||| ||| |||| || ||  |||| |||||| ||||  ||| |||||||||||||||| ||||||    
T  51098212 gtttgcataaacaacttaattaaacgcttctcatgtaggtatttatgtataagatattcctattataaaagataaaataacgtcaaa 51098298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 54325190 - 54325124
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| |||| |||||||||||||| | ||||| |||||| ||| | |||||||||||||||||||||    
T  54325190 taaatacttatcatataagtgcttgtgtataaactatttctattacaaaagataaaataaagtcaaa 54325124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 20907103 - 20907152
Alignment:
Q  49 tataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||||| |||| |||||||||||| ||||| |||||||||||||||||    
T  20907103 tataagtgtttatgtataagctatttgtataagaaaagataaaataaagt 20907152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 21193928 - 21193981
Alignment:
Q  49 tataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| ||| |||| |||||||||||| |||| ||||||||||||||||||||||    
T  21193928 tatatgtgattatgtataagctatttttatagtaaaagataaaataaagtcaaa 21193981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 4798697 - 4798649
Alignment:
Q  51 taagtgcttatctataagctatttatataataaaagataaaataaagtc 99  Q
    ||||||||||| |||||||||||| ||||  ||||||||||||||||||    
T  4798697 taagtgcttatgtataagctatttctatatcaaaagataaaataaagtc 4798649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 5219643 - 5219591
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    ||||||||||||| || |||| ||||| | |||||||||||||||||||||||    
T  5219643 tcatataagtgctcatgtatatgctatctctataataaaagataaaataaagt 5219591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 30207731 - 30207663
Alignment:
Q  28 aacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaa 96  Q
    ||||||||||| ||||| |||||||||||||||| |||| | || || ||||| |||| ||||||||||    
T  30207731 aacttaattaagcacttatcatataagtgcttatgtatatgttagttctataacaaaaaataaaataaa 30207663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 36734820 - 36734876
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||| ||||| || ||| ||||| ||||| |||||||||||||||    
T  36734820 tcatataagtgcttatgtataatctctttctataacaaaaggtaaaataaagtcaaa 36734876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 4071811 - 4071865
Alignment:
Q  47 catataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||| |||| ||||| |||||| ||||| |||||||||||||||||||||    
T  4071811 catataagtgtttatatataa-ctatttctataacaaaagataaaataaagtcaaa 4071865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 9843840 - 9843773
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataata 82  Q
    |||||| ||||||||||||| |||   ||| |||||||| ||||||| |||||||||||| |||||||    
T  9843840 tgtttggataaacaacttaaataagtgcttatcatataactgcttatgtataagctatttctataata 9843773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 36048731 - 36048781
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    |||||||||||| |||||||||||| ||||| |||||||||| |||||||||    
T  36048731 ataagtgcttat-tataagctatttctataacaaaagataaattaaagtcaa 36048781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 102
Target Start/End: Complemental strand, 41701563 - 41701528
Alignment:
Q  67 agctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||| |||||||||||||||||||||    
T  41701563 agctatttatataacaaaagataaaataaagtcaaa 41701528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 44319871 - 44319929
Alignment:
Q  40 cacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtc 99  Q
    ||||| ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||    
T  44319871 cacttatcatataagtgctcatgtataaactatttctataa-aaaagataaaataaagtc 44319929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 6987890 - 6987828
Alignment:
Q  40 cacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||| |||||||| ||||| ||||| |||||  |||| |||||||||||| |||||||||    
T  6987890 cacttgttatataagtacttatgtataaactattattatagtaaaagataaaacaaagtcaaa 6987828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 14011130 - 14011212
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaag 97  Q
    |||||| |||||||||||||||||    || |||||||| || || | ||||||||| || ||||| ||||||||||||||||    
T  14011130 tgtttggataaacaacttaattaagtgtttatcatataaatgattgtgtataagctagttttataacaaaagataaaataaag 14011212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 19304845 - 19304911
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||| ||| |||||||||||||||| | |||||||||  | ||||||||||||  |||||||||||    
T  19304845 taaacgcttctcatataagtgcttatgtttaagctattgctttaataaaagatatgataaagtcaaa 19304911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 19691351 - 19691389
Alignment:
Q  63 tataagctatttatataataaaagataaaataaagtcaa 101  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  19691351 tataagctatttctataataaaagttaaaataaagtcaa 19691389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 19701936 - 19701974
Alignment:
Q  63 tataagctatttatataataaaagataaaataaagtcaa 101  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  19701936 tataagctatttctataataaaagttaaaataaagtcaa 19701974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 21593149 - 21593099
Alignment:
Q  51 taagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    ||||||||||| ||||| |||||| |||||  |||||||||||||||||||    
T  21593149 taagtgcttatgtataaactatttctataactaaagataaaataaagtcaa 21593099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 27405946 - 27406034
Alignment:
Q  17 tttgaataaacaacttaattaaacactt---gtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||||| |||||| ||| |||   || ||||||||| ||||  |||| |||||| |||| ||||||||||||||||| ||||    
T  27405946 tttgaataaacaaattaatttaacgcttacagtaatataagtgtttattcataaactatttctatagtaaaagataaaataaaggcaaa 27406034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 29467665 - 29467627
Alignment:
Q  202 gagtttatggaaatatgttgaaaacagcttatggacatg 240  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  29467665 gagtttatggaaataagctgaaaacagcttatggacatg 29467627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 35405939 - 35406013
Alignment:
Q  165 atataaactctaggatgttttcaaaagctatccagtcgagtttatggaaatatgttgaaaacagcttatggacat 239  Q
    ||||||||| |||| |||||||||||| ||||| |  ||| |||||||| || | ||||||||||||||| ||||    
T  35405939 atataaactataggttgttttcaaaagttatcctggagagcttatggaagtaagctgaaaacagcttatgaacat 35406013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 40709521 - 40709475
Alignment:
Q  48 atataagtgcttatctataagctatttatataataaaagataaaata 94  Q
    |||||||||||||| |||||||| ||| ||||| |||||||||||||    
T  40709521 atataagtgcttatttataagctgtttctataacaaaagataaaata 40709475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 4471100 - 4471149
Alignment:
Q  48 atataagtgcttatctataagctatttatataataaaagataaaataaag 97  Q
    ||||||||||||||  |||| |||||| ||||| ||||||||||||||||    
T  4471100 atataagtgcttatgcataaactatttttataacaaaagataaaataaag 4471149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 6364087 - 6364128
Alignment:
Q  57 cttatctataagctatttatataataaaagataaaataaagt 98  Q
    ||||| |||||||||||| ||||| |||||||||||||||||    
T  6364087 cttatgtataagctatttctataacaaaagataaaataaagt 6364128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 7749224 - 7749175
Alignment:
Q  47 catataagtgcttatctataagctatttatataataaaagataaaataaa 96  Q
    |||||||||| |||| |||| ||||||| |||||||||||| ||||||||    
T  7749224 catataagtgtttatgtatacgctatttctataataaaagagaaaataaa 7749175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 27249701 - 27249754
Alignment:
Q  49 tataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| ||| |||| |||||||||||| |||| ||||| ||||||||||||||||    
T  27249701 tatatgtgattatatataagctatttttatagtaaaatataaaataaagtcaaa 27249754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 32724037 - 32724102
Alignment:
Q  37 aaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| ||| |||||| ||||||||| | ||| |||||| ||| | |||||||||||||||||||||    
T  32724037 aaacgcttctcatatcagtgcttatgtctaatctatttctattacaaaagataaaataaagtcaaa 32724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 7730513 - 7730577
Alignment:
Q  17 tttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataat 81  Q
    |||| ||||||||||||||||| ||||| | |||||| || ||||||| ||| ||||| ||||||    
T  7730513 tttggataaacaacttaattaagcacttattatataaatgtttatctacaagttatttttataat 7730577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 22684659 - 22684603
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||| ||||| | |||||||||||| ||||| ||| | |||||||||||||||    
T  22684659 tcatataaatgcttctgtataagctatttctataacaaacggtaaaataaagtcaaa 22684603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 30024627 - 30024679
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||||||| |||||  ||||| ||||| ||||| |||||||||||||||||    
T  30024627 tcatataagtacttatgcataagttatttctataacaaaagataaaataaagt 30024679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 41088311 - 41088363
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||||||||||||| ||||| ||||||  | || |||||||||||||||||    
T  41088311 tcatataagtgcttatgtataaactattttcacaacaaaagataaaataaagt 41088363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 42322018 - 42321966
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||| ||||  ||||||||||| ||||| ||| |||||||||||||||||    
T  42322018 ataagtgtttatgaataagctatttttataacaaatgataaaataaagtcaaa 42321966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 50745931 - 50745983
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| ||||||| | |||||||||| ||||| ||||||||||||||| |||||    
T  50745931 ataaatgcttatgtctaagctatttttataacaaaagataaaataaaatcaaa 50745983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 5e-19; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 48588561 - 48588645
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtc 99  Q
    |||||||||||||||||||||||| | ||| ||||||||| |||||  |||||| ||||| |||||||||| |||||||||||||    
T  48588561 tgtttgaataaacaacttaattaagctcttatcatataagagcttacatataagttatttctataataaaatataaaataaagtc 48588645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 20192744 - 20192693
Alignment:
Q  51 taagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  20192744 taagtgcttatgtataagctatttatataacaaaagataaaataaagtcaaa 20192693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 38462198 - 38462264
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||| ||||||||||| |||| |||||||||||| ||||  |||||||||||||||||||||    
T  38462198 taaacacttatcatataagtgtttatttataagctatttctataccaaaagataaaataaagtcaaa 38462264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 41159005 - 41159091
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    |||||| |||| |||||||||||||| ||| || ||||||||||||| |||||| ||||  |||||  |||||||||||||||||||    
T  41159005 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 41159091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 4534530 - 4534445
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatat-aataaaagataaaataaagtc 99  Q
    |||||| ||||||||||||||||| ||||| |  ||||||||||||  |||||| ||||||||| ||||||||||| |||||||||    
T  4534530 tgtttggataaacaacttaattaagcacttatagtataagtgcttacgtataagttatttatataaataaaagatataataaagtc 4534445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 39971238 - 39971302
Alignment:
Q  38 aacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||| |||||||||||||||| |||||| || |||||||| |||||||||||||||| ||||    
T  39971238 aacacttatcatataagtgcttatgtataagttacttatataacaaaagataaaataaagccaaa 39971302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 41028994 - 41028939
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    |||||||||||||||| |||||||||||| ||||| |||||| |||||||||||||    
T  41028994 tcatataagtgcttatgtataagctatttctataacaaaagaaaaaataaagtcaa 41028939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 49587057 - 49587003
Alignment:
Q  47 catataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||    
T  49587057 catataagtgctta-ctataagctatttctataacaaaagataaaataaagtcaaa 49587003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 25964345 - 25964419
Alignment:
Q  22 ataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaa 96  Q
    |||||||||||||||||   ||| |||||||||| ||| | |||||||||||| ||||| |||||||||||||||    
T  25964345 ataaacaacttaattaagtgcttatcatataagttcttttgtataagctatttttataacaaaagataaaataaa 25964419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 25185891 - 25185975
Alignment:
Q  17 tttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| |||||||||||||||||    || ||||||||||||||||  ||||| ||||||||||| ||||||| |||||||||||||    
T  25185891 tttggataaacaacttaattaagtgtttatcatataagtgcttatgaataagatatttatataacaaaagat-aaataaagtcaaa 25185975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 12923472 - 12923412
Alignment:
Q  42 cttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||| |||||||||||| | |||||||||||  | |||||||||||||||||||||||||    
T  12923472 cttgtgatataagtgcttgtgtataagctattgctgtaataaaagataaaataaagtcaaa 12923412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 13221683 - 13221723
Alignment:
Q  102 agctaaaaccaaactaccgaattagaaaaatggagtgctat 142  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  13221683 agctaaaaccaaactaccgaattggaaaaatggagtgctat 13221723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 16790499 - 16790443
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||| |||||||||||| ||||| || |||||||||||| |||||    
T  16790499 tcatataagtgcttatgtataagctatttttataacaacagataaaataaaatcaaa 16790443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 22232753 - 22232809
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||| |||| || |||||||||||||||||| ||| |||||||||||||||||    
T  22232753 tcatataaatgctcatgtataagctatttatataacaaatgataaaataaagtcaaa 22232809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 44374787 - 44374731
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||| |||||||||| | | ||| |||||||||||||||||||||    
T  44374787 tcatataagtgcttatgtataagctatatctttaacaaaagataaaataaagtcaaa 44374731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 49772818 - 49772758
Alignment:
Q  39 acacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtc 99  Q
    |||||| ||||||||||| |||| |||||||||||| | |||||||| |||||||||||||    
T  49772818 acacttatcatataagtgtttatgtataagctatttttgtaataaaaaataaaataaagtc 49772758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 905113 - 905058
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    ||||||||| |||||  |||||||||||| ||||| ||||||||||||||||||||    
T  905113 tcatataagcgcttaagtataagctatttctataacaaaagataaaataaagtcaa 905058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 33434148 - 33434094
Alignment:
Q  47 catataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||||||| |||||| |||||| |||| |||||||||||||||||||||    
T  33434148 catataagtgcttatgtataagatattta-ataacaaaagataaaataaagtcaaa 33434094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 44237389 - 44237468
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaata 94  Q
    |||||| |||||||||||||||||   ||| |||| ||| |||||||  ||||||||||| |||||||||| ||||||||    
T  44237389 tgtttggataaacaacttaattaagggcttctcatctaaatgcttatgcataagctatttttataataaaacataaaata 44237468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 1395604 - 1395654
Alignment:
Q  52 aagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||| ||| |||||||||||| ||||| |||||||||||||||||||||    
T  1395604 aagtgcatatgtataagctatttctataacaaaagataaaataaagtcaaa 1395654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 16790231 - 16790181
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaa 96  Q
    |||||||||||||||| |||||| ||||| ||||| |||||||||||||||    
T  16790231 tcatataagtgcttatatataagttatttctataacaaaagataaaataaa 16790181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 24158676 - 24158611
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataa 80  Q
    |||||| ||||||| |||||||||   |||||||||||||||||||| |||||| ||||| |||||    
T  24158676 tgtttggataaacaccttaattaagttcttgtcatataagtgcttatgtataagttatttctataa 24158611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 48528474 - 48528555
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaa 96  Q
    |||||| |||||||||| ||||||   ||| |||||||||| ||||| |||||||||||| ||||| || | ||||||||||    
T  48528474 tgtttggataaacaactgaattaagagcttatcatataagtacttatgtataagctatttctataacaagaaataaaataaa 48528555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 2304380 - 2304336
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaata 94  Q
    ||||||| |||| |||||||||||| |||||||||||||||||||    
T  2304380 ataagtgattatgtataagctatttctataataaaagataaaata 2304336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 23793482 - 23793571
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgt---catataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| ||||||| |||||||||||  |||| |   ||||||| ||||||| ||||| |||||| ||||| |||||||||||||||||||||    
T  23793482 tgttcgaataaaaaacttaattaagaacttattagcatataattgcttatgtataaactattt-tataacaaaagataaaataaagtcaaa 23793571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 27792799 - 27792855
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||| ||||||||||||  | || |||||||||||||| ||||||    
T  27792799 tcatataagtgcttatgtataagctatttcaaaaacaaaagataaaataaggtcaaa 27792855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 31075617 - 31075673
Alignment:
Q  42 cttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||||||||||| ||||| |||||||||||||| ||| |||| ||||| ||||||    
T  31075617 cttgtcatataagtacttatatataagctatttatttaacaaaatataaagtaaagt 31075673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 32703065 - 32703121
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||| || |||| |||||||||||| ||| ||||||||||||||||| |||||    
T  32703065 tcatataaatgtttatgtataagctatttctattataaaagataaaataaactcaaa 32703121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 275
Target Start/End: Complemental strand, 52323928 - 52323865
Alignment:
Q  209 tggaaatatgttgaaaacagcttatggacatggtgtcataagctatttcaataagccctcataaaca 275  Q
    |||||||| ||||||||||||||||||||   |||||||||  ||||||||||||| |||| |||||    
T  52323928 tggaaataagttgaaaacagcttatggac---gtgtcataaattatttcaataagctctcacaaaca 52323865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 3757980 - 3758031
Alignment:
Q  51 taagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||| |||||||||||| | ||| |||| ||||||||||||||||    
T  3757980 taagtgcttatgtataagctatttttgtaacaaaatataaaataaagtcaaa 3758031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 20174041 - 20173982
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataa 95  Q
    |||||||| || |||||||||||||| ||| || ||||| ||||| ||||||||||||||    
T  20174041 taaacactagttatataagtgcttatgtattagttatttctataacaaaagataaaataa 20173982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 48397590 - 48397629
Alignment:
Q  63 tataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  48397590 tataagttatttttataataaaagataaaataaagtcaaa 48397629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 35394834 - 35394792
Alignment:
Q  56 gcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||| ||||| |||||| |||||||||||||||||||||||    
T  35394834 gcttatgtataatctatttctataataaaagataaaataaagt 35394792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 49546625 - 49546575
Alignment:
Q  51 taagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    ||||||||||| | |||| ||||| ||||| ||||||||||||||||||||    
T  49546625 taagtgcttatgtgtaagatatttttataacaaaagataaaataaagtcaa 49546575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 1816509 - 1816566
Alignment:
Q  46 tcatataagtgcttatctataagctatttat-ataataaaagataaaataaagtcaaa 102  Q
    ||||||||| ||| || ||||| |||||| | ||||||||||||||||||||||||||    
T  1816509 tcatataagagctaatgtataaactattttttataataaaagataaaataaagtcaaa 1816566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 31364831 - 31364880
Alignment:
Q  49 tataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||||||| || |||||||||||| ||||| ||||| |||||||||||    
T  31364831 tataagtgctaatatataagctatttttataacaaaaggtaaaataaagt 31364880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 32064338 - 32064423
Alignment:
Q  17 tttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| ||| ||| |||||| |||||||| |||||| |||||| || |||||| | ||| || || |||| ||||||||||||||||    
T  32064338 tttggatagacatcttaatgaaacacttatcatattagtgctaatgtataagttctttctaaaacaaaaaataaaataaagtcaaa 32064423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 33307728 - 33307667
Alignment:
Q  41 acttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| |||||||||||||||| ||||||||||||   ||| |||| || |||||||||||||    
T  33307728 acttatcatataagtgcttatgtataagctatttcagtaacaaaatatgaaataaagtcaaa 33307667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 40122884 - 40122839
Alignment:
Q  57 cttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||| ||||||||||||  |||| |||||||||||||||||||||    
T  40122884 cttatgtataagctatttcaataacaaaagataaaataaagtcaaa 40122839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 42039091 - 42039140
Alignment:
Q  51 taagtgcttatctataagctatttatataataaaagataaaataaagtca 100  Q
    ||||||||||| |||||||||||| | ||| |||| ||||||||||||||    
T  42039091 taagtgcttatgtataagctatttctgtaacaaaaaataaaataaagtca 42039140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 95
Target Start/End: Original strand, 47217284 - 47217333
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataa 95  Q
    |||||||||| |||||||||||||||||| | ||| |||| |||||||||    
T  47217284 tcatataagtacttatctataagctatttctctaacaaaacataaaataa 47217333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 2128382 - 2128342
Alignment:
Q  58 ttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||| |||||||||||| ||||| |||||||||||||||||    
T  2128382 ttatgtataagctatttctataacaaaagataaaataaagt 2128342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 264
Target Start/End: Complemental strand, 20192643 - 20192588
Alignment:
Q  206 ttatggaaatatgttgaaaacagcttatggacatggtgtcataagctatttcaataagc 264  Q
    ||||||||||  |||||||||||||||||||||   ||||||||||| |||| ||||||    
T  20192643 ttatggaaatgagttgaaaacagcttatggaca---tgtcataagctgtttctataagc 20192588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 102
Target Start/End: Complemental strand, 31615631 - 31615591
Alignment:
Q  62 ctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||| |||||| ||||||||||||||| |||||    
T  31615631 ctataagctattcatataacaaaagataaaataaaatcaaa 31615591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 138
Target Start/End: Complemental strand, 32900690 - 32900654
Alignment:
Q  102 agctaaaaccaaactaccgaattagaaaaatggagtg 138  Q
    |||||||||||||||| |||||| |||||||||||||    
T  32900690 agctaaaaccaaactatcgaattggaaaaatggagtg 32900654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 36101499 - 36101551
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||| ||||  ||||||||||| | ||||| |||||||||||||||||||    
T  36101499 ataagtggttatgaataagctatttctgtaatataagataaaataaagtcaaa 36101551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 36139809 - 36139861
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||| ||||  ||||||||||| | ||||| |||||||||||||||||||    
T  36139809 ataagtggttatgaataagctatttctgtaatataagataaaataaagtcaaa 36139861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 36646445 - 36646385
Alignment:
Q  180 tgttttcaaaagctatccagtcgagtttatggaaatatgttgaaaacagcttatggacatg 240  Q
    |||||||| |||||||||    |||||||| |||||| | |||||||||||||||||||||    
T  36646445 tgttttcataagctatcctagagagtttatagaaataagatgaaaacagcttatggacatg 36646385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 44284201 - 44284145
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||| || || |||||||||||| ||||| |||| |||||| |||||||||    
T  44284201 tcatataagtactaatgtataagctatttctataacaaaaaataaaacaaagtcaaa 44284145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 48323760 - 48323804
Alignment:
Q  58 ttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| |||||| ||||| ||||||||||||||| |||||||||||    
T  48323760 ttatttataagttatttctataataaaagataatataaagtcaaa 48323804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 51278300 - 51278244
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||| |||| || |||||||||||| ||||| |||| || |||||||||||||    
T  51278300 tcatataattgctaatgtataagctatttctataacaaaatattaaataaagtcaaa 51278244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 52413258 - 52413214
Alignment:
Q  52 aagtgcttatctataagctatttatataataaaagataaaataaa 96  Q
    |||||||||| |||||||||||| ||||| |||||||| ||||||    
T  52413258 aagtgcttatgtataagctatttttataacaaaagatagaataaa 52413214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 54775055 - 54775111
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||| |||||||||  | |||| ||||| ||||| |||||||||||||||||||||    
T  54775055 tcataaaagtgcttacgtttaagttatttctataacaaaagataaaataaagtcaaa 54775111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 46499996 - 46499941
Alignment:
Q  47 catataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  46499996 catataagtgcttatctataagctatttctataagaaaagataaaataaagtcaaa 46499941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 41638484 - 41638399
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtca 100  Q
    |||||| ||||||||||| ||||| ||||| |||||||||||||||| |||||  |||||||| || | |||||||||||||||||    
T  41638484 tgtttggataaacaacttgattaagcacttatcatataagtgcttatgtataatttatttatagaacacaagataaaataaagtca 41638399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 45107550 - 45107605
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  45107550 tcatataagtgcttatctataagctatttctataagaaaa-ataaaataaagtcaaa 45107605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 24702157 - 24702243
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    |||||| ||||| | ||||||||| |||| || | |||||||||| |||||||||||||| ||||| |||| || ||||||||||||    
T  24702157 tgtttggataaatatcttaattaagcactagttacataagtgcttctctataagctatttctataacaaaaaattaaataaagtcaa 24702243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 13037787 - 13037836
Alignment:
Q  42 cttgtcatataagtgcttatctataagctatttatataataaaagataaa 91  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||||||||    
T  13037787 cttgtcatataagtgcttatgtataagctatttctataacaaaagataaa 13037836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 870972 - 871027
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    |||||||||||||||| ||||| |||||| ||||| |||||||||||| |||||||    
T  870972 tcatataagtgcttatgtataaactatttttataacaaaagataaaattaagtcaa 871027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 4363784 - 4363719
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||||||||||||| ||||  |||||| ||||| ||||||| |||||| ||||||    
T  4363784 taaacacttgtcatataagtgcttatgtatactctattt-tataacaaaagattaaataatgtcaaa 4363719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 7120080 - 7120130
Alignment:
Q  49 tataagtgcttatctataagctatttatataataaaagataaaataaagtc 99  Q
    ||||||||||||| ||||| |||||||||||| ||||||| ||||||||||    
T  7120080 tataagtgcttatatataaactatttatataacaaaagatcaaataaagtc 7120130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 4200150 - 4200211
Alignment:
Q  40 cacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    ||||| |||| |||||| |||| |||||| ||||| ||||| ||||||||||||||||||||    
T  4200150 cacttatcatctaagtgtttatatataagttatttttataacaaaagataaaataaagtcaa 4200211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 4202302 - 4202217
Alignment:
Q  16 gtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    ||||| |||| |||||||||||| |  || |||||||||||||||  |||||| ||||| ||||| ||||||||||  ||||||||    
T  4202302 gtttggataagcaacttaattaagcgtttatcatataagtgcttaagtataagttatttctataacaaaagataaaccaaagtcaa 4202217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 48282060 - 48282117
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataata-aaagataaaataaagtcaaa 102  Q
    |||||||||||||||| || ||||||||| ||||| | ||||||||||||||||||||    
T  48282060 tcatataagtgcttatgtaaaagctatttctataaaagaaagataaaataaagtcaaa 48282117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 7200985 - 7200929
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| |||||| |||  ||||||||||||  ||||||||||||||||||||||||||    
T  7200985 tcatgtaagtgtttacttataagctatttccataataaaagataaaataaagtcaaa 7200929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 18434625 - 18434565
Alignment:
Q  42 cttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||||| | ||| | ||||||  |||| |||||||||||||||||||||    
T  18434625 cttgtcatataagtgcttctgtattacctatttccataacaaaagataaaataaagtcaaa 18434565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 23895263 - 23895319
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||  |||| |||||||||||| ||||| ||||||||||||||| |||||    
T  23895263 tcatataagttattatgtataagctatttctataacaaaagataaaataaattcaaa 23895319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 29046087 - 29046011
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaa 91  Q
    |||||| |||||||  |||||||| ||||| || ||||||||||| | |||||| ||||| ||||| ||||||||||    
T  29046087 tgtttggataaacagattaattaagcacttatcgtataagtgcttgtgtataagatatttctataacaaaagataaa 29046011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 36641802 - 36641858
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||| | ||||| |||||| ||||| ||||| |||||||||||||||||||||    
T  36641802 tcatataattacttatatataagttatttctataacaaaagataaaataaagtcaaa 36641858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 42550168 - 42550224
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||| |||||||||| ||||||||| || ||  |||||||||||||||||||||||    
T  42550168 tcatacaagtgcttatgtataagctagttctacgataaaagataaaataaagtcaaa 42550224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 45999427 - 45999375
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||| || |||||||||||| ||||| ||||||||| |||||||||||    
T  45999427 ataagtgctcatgtataagctatttctataacaaaagataagataaagtcaaa 45999375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 49167031 - 49167079
Alignment:
Q  54 gtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||| | |||||||| |||||||||||| ||||||||||||||    
T  49167031 gtgcttatctgttagctatttttataataaaagaaaaaataaagtcaaa 49167079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 50319230 - 50319274
Alignment:
Q  57 cttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    ||||| |||||||||||| ||||| ||||||||||||||||||||    
T  50319230 cttatgtataagctatttctataacaaaagataaaataaagtcaa 50319274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 289168 - 289223
Alignment:
Q  47 catataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||||||  |||||||||||| | ||  |||||||||||||||||||||    
T  289168 catataagtgcttaagtataagctatttttgtagcaaaagataaaataaagtcaaa 289223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 98
Target Start/End: Original strand, 8795060 - 8795095
Alignment:
Q  63 tataagctatttatataataaaagataaaataaagt 98  Q
    |||||| |||||||||||||||||||||||||||||    
T  8795060 tataagttatttatataataaaagataaaataaagt 8795095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 18011831 - 18011886
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    |||||||||||| |||||||||||||||||| ||| || |||||| ||||| ||||    
T  18011831 tcatataagtgcatatctataagctatttatgtaacaagagataatataaaatcaa 18011886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 30259637 - 30259574
Alignment:
Q  39 acacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||| ||||| ||||||||||  | ||||||||| ||||| |||| ||||||||||||||||    
T  30259637 acacttatcatagaagtgcttatgcacaagctatttctataacaaaatataaaataaagtcaaa 30259574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 45170466 - 45170415
Alignment:
Q  47 catataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    ||||||||||||||| || ||||||||| ||||| |||||||| ||||||||    
T  45170466 catataagtgcttatttagaagctatttttataacaaaagatagaataaagt 45170415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 1730825 - 1730875
Alignment:
Q  52 aagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||| |||||||||||| | |||  ||||||||||||||||||||    
T  1730825 aagtgcttatgtataagctatttttttaaccaaagataaaataaagtcaaa 1730875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 240
Target Start/End: Original strand, 3244928 - 3244966
Alignment:
Q  202 gagtttatggaaatatgttgaaaacagcttatggacatg 240  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  3244928 gagtttatggaaataagttgaaaatagcttatggacatg 3244966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 4180764 - 4180714
Alignment:
Q  20 gaataaacaacttaattaaacacttgtcatataagtgcttatctataagct 70  Q
    |||||||||  |||||||| ||||| |||||||||||||||| ||||||||    
T  4180764 gaataaacagtttaattaagcacttatcatataagtgcttatgtataagct 4180714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 102
Target Start/End: Original strand, 35017519 - 35017557
Alignment:
Q  64 ataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  35017519 ataagctatttttataatacaagataaaataaagtcaaa 35017557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 240
Target Start/End: Original strand, 35925719 - 35925757
Alignment:
Q  202 gagtttatggaaatatgttgaaaacagcttatggacatg 240  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  35925719 gagtttatggaaataagttgaaaacagcttatgaacatg 35925757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 37591367 - 37591409
Alignment:
Q  54 gtgcttatctataagctatttatataataaaagataaaataaa 96  Q
    |||||||| ||||| |||||| |||||||||||||||||||||    
T  37591367 gtgcttatgtataaactatttctataataaaagataaaataaa 37591409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 40304197 - 40304147
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaa 96  Q
    |||||| | ||||||  |||||||||||||||||| |||||||||||||||    
T  40304197 tcatattattgcttaggtataagctatttatataacaaaagataaaataaa 40304147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 43722448 - 43722406
Alignment:
Q  56 gcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||| |||||||||||||||||| | |||||||||||||||    
T  43722448 gcttatgtataagctatttatataacagaagataaaataaagt 43722406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 49557062 - 49557120
Alignment:
Q  40 cacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    ||||| |||||||||||||  | |||||| ||||| ||||| |||||||||||||||||    
T  49557062 cacttatcatataagtgctgctgtataagttatttctataacaaaagataaaataaagt 49557120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 15942264 - 15942305
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaa 91  Q
    |||||||||||| |||||||||||||||||  ||||||||||    
T  15942264 ataagtgcttatgtataagctatttatatagaaaaagataaa 15942305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 17420134 - 17420183
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagtc 99  Q
    |||||| ||||| ||||| |||||| ||||| ||||||||||||||||||    
T  17420134 ataagtacttatgtataaactatttttataagaaaagataaaataaagtc 17420183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 33759502 - 33759547
Alignment:
Q  51 taagtgcttatctataagctatttatataataaaagataaaataaa 96  Q
    ||||||||||| |||||||||||| |||||| ||||||| ||||||    
T  33759502 taagtgcttatatataagctatttctataattaaagatataataaa 33759547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 38651552 - 38651499
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtc 99  Q
    |||| ||||||||||| ||||||||| || ||||| |||||||||| |||||||    
T  38651552 tcatgtaagtgcttatgtataagctaattctataacaaaagataaactaaagtc 38651499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 98
Target Start/End: Original strand, 44251364 - 44251397
Alignment:
Q  65 taagctatttatataataaaagataaaataaagt 98  Q
    |||||||||| |||||||||||||||||||||||    
T  44251364 taagctatttctataataaaagataaaataaagt 44251397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 49560702 - 49560657
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaa 91  Q
    |||||||||||||||| |||||  ||||||||||| ||||||||||    
T  49560702 tcatataagtgcttatatataatatatttatataacaaaagataaa 49560657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 52286576 - 52286657
Alignment:
Q  17 tttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||| |||||| |||||||| | | ||| ||||||||| ||||||  ||||| ||||| || || |||||||||||||||||    
T  52286576 tttggataaaccacttaatttagcgcttatcatataagcgcttatgaataagatatttctacaacaaaagataaaataaagt 52286657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 1393150 - 1393110
Alignment:
Q  58 ttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||| |||||||||||||||||| ||||| |||||||||||    
T  1393150 ttatatataagctatttatataacaaaagttaaaataaagt 1393110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 4549797 - 4549845
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||| ||||||| || ||||||||| ||||| |||||||||||||||||    
T  4549797 ataaatgcttatgtacaagctatttctataacaaaagataaaataaagt 4549845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 6933100 - 6933048
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||| || ||||||| |||| ||||| |||| ||||||||||||||||    
T  6933100 ataagtgctcatgtataagccatttttataacaaaacataaaataaagtcaaa 6933048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 7274082 - 7274026
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||| ||||||| |||| | ||||| ||||| ||||||| |||||||||||||    
T  7274082 tcatataaatgcttatgtatatgttatttttataacaaaagatgaaataaagtcaaa 7274026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 15942879 - 15942835
Alignment:
Q  57 cttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    |||||| ||||||||||| ||| ||| ||||||||||||||||||    
T  15942879 cttatcaataagctatttctattatacaagataaaataaagtcaa 15942835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 17269177 - 17269233
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||| |||||| ||||| || || |||||  ||||||||||||||    
T  17269177 tcatataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtcaaa 17269233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 18421001 - 18420941
Alignment:
Q  42 cttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||||| | ||| | |||||| ||  | |||||||||||||||||||||    
T  18421001 cttgtcatataagtgcttgtgtattacctatttctagcacaaaagataaaataaagtcaaa 18420941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 30815810 - 30815726
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgctt-atctataagctatttatataataaaagataaaataaagt 98  Q
    |||||| || |||||||||||||| | ||| |||||||| | ||| || | |||||| ||| ||||| |||||||||||||||||    
T  30815810 tgtttggatcaacaacttaattaagcgcttatcatataattactttatgtctaagctttttctataacaaaagataaaataaagt 30815726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 33339587 - 33339511
Alignment:
Q  22 ataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||||||||||||||    || ||||||| ||| |||| |||||||||||| ||||  |||||||||||| ||||    
T  33339587 ataaacaacttaattaagtggttatcatataggtgtttatgtataagctatttctataccaaaagataaaatgaagt 33339511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 36151636 - 36151592
Alignment:
Q  58 ttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| ||||||||||||  |||| |||||||||||||||||||||    
T  36151636 ttatgtataagctatttcaataacaaaagataaaataaagtcaaa 36151592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 36602717 - 36602773
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||| |||| |||||||||| | || || || ||||||||||||||||||    
T  36602717 tcatataagtgattatgtataagctatatctacaacaatagataaaataaagtcaaa 36602773  T

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Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 42397693 - 42397741
Alignment:
Q  49 tataagtgcttatctataagctatttatataataaaagataaaataaag 97  Q
    ||||||||||||| |||||||||||| | ||| |||| |||||||||||    
T  42397693 tataagtgcttatgtataagctatttctgtaacaaaacataaaataaag 42397741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 44032142 - 44032086
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||| |||| |||||||  ||| ||||| ||||| |||||||||||||||    
T  44032142 tcatataagtgtttatgtataagccgtttctataacaaaagctaaaataaagtcaaa 44032086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 102
Target Start/End: Original strand, 45234148 - 45234180
Alignment:
Q  70 tatttatataataaaagataaaataaagtcaaa 102  Q
    ||||| |||||||||||||||||||||||||||    
T  45234148 tatttctataataaaagataaaataaagtcaaa 45234180  T

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Target: scaffold0024 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 23807 - 23888
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaa 96  Q
    |||||| ||||||||||||||||||||||| ||||| ||| |||||  |||||||||||| ||||| ||||||| |||||||    
T  23807 tgtttggataaacaacttaattaaacacttatcataaaagcgcttacatataagctatttctataacaaaagatgaaataaa 23888  T

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Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 27503 - 27559
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| ||||||||||| |||||| ||||| ||||| | |||||||||||||||||||    
T  27503 tcatgtaagtgcttatgtataagttatttctataacagaagataaaataaagtcaaa 27559  T

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Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 10150658 - 10150731
Alignment:
Q  22 ataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataa 95  Q
    ||||||||||||||||| ||||| | ||||||||| |||| |||||| ||||| ||||||||||||||||||||    
T  10150658 ataaacaacttaattaagcacttattatataagtgtttatgtataagttatttctataataaaagataaaataa 10150731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 33197392 - 33197327
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    ||||| ||| ||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  33197392 taaacgcttatcatataagtgcttatctataagctatttctataacaaaagatagaataaagtcaa 33197327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 17952859 - 17952788
Alignment:
Q  31 ttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||| || ||||| ||||||||| |||||| |||||||||||| ||||| |||||||||||||||||||||    
T  17952859 ttaataaagcacttatcatataagagcttatatataagctatttctataacaaaagataaaataaagtcaaa 17952788  T

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Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 31461365 - 31461421
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||| |||| |||||||||||| ||||| |||||||||||||||||||||    
T  31461365 tcatataagtggttatatataagctatttctataacaaaagataaaataaagtcaaa 31461421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 25609727 - 25609778
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    |||||||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  25609727 ataagtgcttatgtataagctatttctataagaaaagataaaataaagtcaa 25609778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 35755655 - 35755589
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||| |||||||| |||| |||||||||||| |||||| ||| | ||||||||||||||    
T  35755655 taaacacttgtcgtataagtgtttatgtataagctatttctataatcaaatagaaaataaagtcaaa 35755589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 39557814 - 39557748
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||||||||||||| ||||  ||||||||||| ||| | ||| |||||||||||||||||    
T  39557814 taaacacttgtcatataagtggttatacataagctatttttatgacaaatgataaaataaagtcaaa 39557748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 4026748 - 4026796
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    ||||||||||||||||||||||||| ||||  |||||||||||||||||    
T  4026748 ataagtgcttatctataagctatttttatagcaaaagataaaataaagt 4026796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 11344435 - 11344371
Alignment:
Q  38 aacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||| ||||||||||||||  ||||| ||||| ||||| ||||||||||| |||||||||    
T  11344435 aacacttgttatataagtgcttatgcataagatatttctataacaaaagataaaagaaagtcaaa 11344371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 11393509 - 11393453
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||||||||||||||||||||| ||||  |||||||| |||||| |||||    
T  11393509 tcatataagtgcttatctataagctatttctatatcaaaagatataataaattcaaa 11393453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 11410170 - 11410114
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||||||||||||||||||||| ||||  |||||||| |||||| |||||    
T  11410170 tcatataagtgcttatctataagctatttctatatcaaaagatataataaattcaaa 11410114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 26484257 - 26484193
Alignment:
Q  16 gtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataa 80  Q
    ||||| ||||||||||||||||| || || ||||||||||||||||  ||||||||||| |||||    
T  26484257 gtttggataaacaacttaattaatcatttatcatataagtgcttatggataagctatttctataa 26484193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 28803649 - 28803593
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||| |||||| |||||  |||| |||||||||||||||||||||    
T  28803649 tcatataagtgcttatatataagttatttcgataacaaaagataaaataaagtcaaa 28803593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 32098442 - 32098394
Alignment:
Q  55 tgcttatctataagctatttatataataaaagataaaataaagtcaaag 103  Q
    ||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  32098442 tgcttatatataagctatttctataacaaaagataaaataaagtcaaag 32098394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 13864571 - 13864630
Alignment:
Q  40 cacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtc 99  Q
    |||| |||||||||||| |||| |||||||||||| ||||| ||||| ||||||||||||    
T  13864571 cactcgtcatataagtgtttatgtataagctatttctataacaaaaggtaaaataaagtc 13864630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 5045295 - 5045245
Alignment:
Q  51 taagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    |||||| |||| |||||||||||| ||||| ||||||||||||||||||||    
T  5045295 taagtgtttatgtataagctatttttataacaaaagataaaataaagtcaa 5045245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 28933753 - 28933807
Alignment:
Q  48 atataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||| || |||||||||||||||||| |||||||||||| || |||||    
T  28933753 atataagtgctcatgtataagctatttatataacaaaagataaaatcaaatcaaa 28933807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 37845495 - 37845442
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtc 99  Q
    |||||||||| ||||| |||| ||||||| |||||||||| |||||||||||||    
T  37845495 tcatataagttcttatttatatgctatttttataataaaatataaaataaagtc 37845442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 38239694 - 38239637
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaag 103  Q
    |||| |||||| |||| |||||||||||| ||||| |||||||||||| |||||||||    
T  38239694 tcatgtaagtgtttatgtataagctatttctataacaaaagataaaatcaagtcaaag 38239637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 1939395 - 1939335
Alignment:
Q  180 tgttttcaaaagctatccagtcgagtttatggaaatatgttgaaaacagcttatggacatg 240  Q
    |||||||| ||||||| | |  ||| ||||||||||| |||||||||||||||||||||||    
T  1939395 tgttttcataagctatactggagagcttatggaaataagttgaaaacagcttatggacatg 1939335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 3102620 - 3102676
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||| ||||||| |||||||||||| ||||  |||| ||||||||||||||||    
T  3102620 tcatataactgcttatgtataagctatttttatagcaaaatataaaataaagtcaaa 3102676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 10143103 - 10143155
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||| |||||| ||||| ||||| |||||||||||| ||||||||    
T  10143103 ataagtgcttatgtataagttatttctataacaaaagataaaattaagtcaaa 10143155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 264
Target Start/End: Original strand, 12215840 - 12215895
Alignment:
Q  206 ttatggaaatatgttgaaaacagcttatggacatggtgtcataagctatttcaataagc 264  Q
    |||||| |||||| |||||||||||||||||||   |||||||||||||||| ||||||    
T  12215840 ttatgggaatatggtgaaaacagcttatggaca---tgtcataagctatttccataagc 12215895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 18962181 - 18962129
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||| ||||||||||| ||| |||||||| ||||| |||||||||||||||||    
T  18962181 tcatgtaagtgcttatgtattagctatttttataacaaaagataaaataaagt 18962129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 28677791 - 28677739
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||| | |||||||||||| |||  ||||||||||||||||||||||    
T  28677791 ataagtgcttgtgtataagctatttttattgtaaaagataaaataaagtcaaa 28677739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 34055040 - 34054988
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||| |||| ||||||| ||||| |||||||||||||||| ||||    
T  34055040 ataagtgcttatgtataggctatttctataacaaaagataaaataaaggcaaa 34054988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 34339040 - 34339104
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtca 100  Q
    ||||||||| |||||||||||||||| ||||| || ||| ||||   ||||||||||||||||||    
T  34339040 taaacacttatcatataagtgcttatgtataaactttttctatagctaaagataaaataaagtca 34339104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 35459837 - 35459893
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||| || | |||||||||||| ||||  |||||||||||||||||||||    
T  35459837 tcatataagtgattttgtataagctatttgtataccaaaagataaaataaagtcaaa 35459893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 36852396 - 36852448
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||| |||||||||||| | || || |||||||||||||||||||    
T  36852396 ataagtgcttatgtataagctatttctctattagaagataaaataaagtcaaa 36852448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 37053509 - 37053577
Alignment:
Q  34 attaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||| ||||| |||||||||||||||| ||||  |||||| ||||| | || ||||||||||||||||    
T  37053509 attaagcacttatcatataagtgcttatgtatagactatttctataacagaaaataaaataaagtcaaa 37053577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 37766725 - 37766781
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||| ||| ||||||| |||| | |||| ||||||||||||||||    
T  37766725 tcatataagtgcttatgtattagctattcatatgacaaaaaataaaataaagtcaaa 37766781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 3673731 - 3673786
Alignment:
Q  43 ttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    ||||||||||||||||||| ||| || ||||| ||||| |||| ||||||||||||    
T  3673731 ttgtcatataagtgcttatgtattagttatttctataacaaaatataaaataaagt 3673786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 5998844 - 5998793
Alignment:
Q  47 catataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    ||||||| || |||| |||||||||||| ||||| |||||||||||||||||    
T  5998844 catataattgtttatatataagctatttttataacaaaagataaaataaagt 5998793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 27288553 - 27288616
Alignment:
Q  39 acacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||| || ||||||||||||| || ||| | ||| ||||||||||||||||||||| |||||    
T  27288553 acacttatcctataagtgcttatgtaaaagttgtttctataataaaagataaaataaaatcaaa 27288616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 5133708 - 5133750
Alignment:
Q  55 tgcttatctataagctatttatataataaaagataaaataaag 97  Q
    ||||||| |||||||||||| ||||| ||||||||||||||||    
T  5133708 tgcttatgtataagctatttctataacaaaagataaaataaag 5133750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 10190206 - 10190256
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaa 96  Q
    |||||||||||||||| ||||| |||||| ||||| ||| |||||||||||    
T  10190206 tcatataagtgcttatgtataaactatttttataacaaaggataaaataaa 10190256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 10198621 - 10198567
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtca 100  Q
    |||||||||| ||| | ||||||||||| ||||||  ||||||||||||||||||    
T  10198621 tcatataagtacttttgtataagctattcatataagtaaagataaaataaagtca 10198567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 240
Target Start/End: Original strand, 10285893 - 10285927
Alignment:
Q  206 ttatggaaatatgttgaaaacagcttatggacatg 240  Q
    ||||||||||| |||||||||||||||||||||||    
T  10285893 ttatggaaataagttgaaaacagcttatggacatg 10285927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 27237997 - 27237947
Alignment:
Q  51 taagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    ||||||||||| ||||||||||||  ||||||||| |||||| ||||||||    
T  27237997 taagtgcttatgtataagctatttcaataataaaatataaaacaaagtcaa 27237947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 240
Target Start/End: Complemental strand, 34652073 - 34652039
Alignment:
Q  206 ttatggaaatatgttgaaaacagcttatggacatg 240  Q
    ||||||||||| |||||||||||||||||||||||    
T  34652073 ttatggaaataagttgaaaacagcttatggacatg 34652039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 41042063 - 41042025
Alignment:
Q  202 gagtttatggaaatatgttgaaaacagcttatggacatg 240  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  41042063 gagtttatggaaataagttgaaaacagctgatggacatg 41042025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 7936922 - 7936999
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaa 92  Q
    |||||| |||||||||||||||||   ||| | | |||||||||||| ||||| | |||| ||||| |||||||||||    
T  7936922 tgtttggataaacaacttaattaagtgcttttaacataagtgcttatgtataaaccatttctataacaaaagataaaa 7936999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 94
Target Start/End: Complemental strand, 8820405 - 8820368
Alignment:
Q  57 cttatctataagctatttatataataaaagataaaata 94  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  8820405 cttatgtataagctatttatataacaaaagataaaata 8820368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 9551517 - 9551562
Alignment:
Q  57 cttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||| |||||||||||| |||||||||  ||||||||||||||||    
T  9551517 cttatgtataagctatttttataataaattataaaataaagtcaaa 9551562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 11393808 - 11393747
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaag 97  Q
    |||||| || |||| ||||||||||| |||||||||||| ||||  |||||||| |||||||    
T  11393808 taaacatttatcatttaagtgcttatgtataagctatttctataccaaaagatacaataaag 11393747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 11410469 - 11410408
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaag 97  Q
    |||||| || |||| ||||||||||| |||||||||||| ||||  |||||||| |||||||    
T  11410469 taaacatttatcatttaagtgcttatgtataagctatttctataccaaaagatacaataaag 11410408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 240
Target Start/End: Original strand, 32615951 - 32615988
Alignment:
Q  203 agtttatggaaatatgttgaaaacagcttatggacatg 240  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  32615951 agtttatggaaataagttgaaaacaacttatggacatg 32615988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 37033982 - 37034027
Alignment:
Q  57 cttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||| ||||| |||||| ||||| |||||||||||||||||||||    
T  37033982 cttatgtataaactatttctataaaaaaagataaaataaagtcaaa 37034027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 41033088 - 41033047
Alignment:
Q  51 taagtgcttatctataagctatttatataataaaagataaaa 92  Q
    ||||||||||| |||||||||||| ||||| |||||||||||    
T  41033088 taagtgcttatgtataagctatttctataacaaaagataaaa 41033047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 103
Target Start/End: Original strand, 43199194 - 43199227
Alignment:
Q  70 tatttatataataaaagataaaataaagtcaaag 103  Q
    ||||||||||| ||||||||||||||||||||||    
T  43199194 tatttatataacaaaagataaaataaagtcaaag 43199227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 44443251 - 44443300
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagtc 99  Q
    |||||||||||| |||||||||||| ||| | ||||||||||||| ||||    
T  44443251 ataagtgcttatgtataagctatttttattacaaaagataaaatatagtc 44443300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 44606229 - 44606180
Alignment:
Q  48 atataagtgcttatctataagctatttatataataaaagataaaataaag 97  Q
    ||||||||| |||| ||||||||||||  |||| ||||||||||||||||    
T  44606229 atataagtgtttatgtataagctattttcataacaaaagataaaataaag 44606180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 1899817 - 1899881
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtca 100  Q
    ||||||||| ||| | || ||||||| ||||||| |||| |||||||||  ||||||||||||||    
T  1899817 taaacacttatcacagaaatgcttatgtataagcgatttctataataaagtataaaataaagtca 1899881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 9478226 - 9478282
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||| |||| |||||||||||| ||||| |  |||||||||||| |||||    
T  9478226 tcatataagtgtttatgtataagctatttctataacagtagataaaataaactcaaa 9478282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 16946969 - 16947025
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||| | ||||| |||||||||||| | ||| ||||||| |||||||||||||    
T  16946969 tcatataaattcttatgtataagctatttgtgtaagaaaagattaaataaagtcaaa 16947025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 17017634 - 17017690
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||| | ||||| |||||||||||| | ||| ||||||| |||||||||||||    
T  17017634 tcatataaattcttatgtataagctatttgtgtaagaaaagattaaataaagtcaaa 17017690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 36114350 - 36114398
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||||||||| ||| |||||||| ||| | |||||||||||||||||    
T  36114350 ataagtgcttatatattagctatttttatgacaaaagataaaataaagt 36114398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 1217 - 1161
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  1217 tcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaa 1161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 2758 - 2814
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  2758 tcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaa 2814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 64)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 2514629 - 2514685
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  2514629 tcatgtaagtgcttatgtataagctatttctataataaaagataaaataaagtcaaa 2514685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 4248881 - 4248941
Alignment:
Q  42 cttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||||||| ||||||||||||  |||| |||||||||||||||||||||    
T  4248881 cttgtcatataagtgcttatatataagctatttcaataacaaaagataaaataaagtcaaa 4248941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 9027496 - 9027560
Alignment:
Q  38 aacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||| | ||||||||||||||||||||||||||| || |||| |||||||||||||||||||    
T  9027496 aacacttattatataagtgcttatctataagctatttctacaatagaagataaaataaagtcaaa 9027560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 34405016 - 34405088
Alignment:
Q  30 cttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||  |||| | ||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||    
T  34405016 cttaattaaggacttatgatataagtgtttatctataagctatttctataataaaagttaaaataaagtcaaa 34405088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 22742296 - 22742349
Alignment:
Q  49 tataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||| |||||||||||||||||| ||||| ||| |||||||||||||||||    
T  22742296 tataagttcttatctataagctatttgtataacaaaggataaaataaagtcaaa 22742349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 27890014 - 27889937
Alignment:
Q  18 ttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataa 95  Q
    ||||||||||||||||||||| || || |||||| ||||||||| || ||| ||||| ||||| || |||||||||||    
T  27890014 ttgaataaacaacttaattaagcatttatcatatgagtgcttatgtacaagttatttctataacaacagataaaataa 27889937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 3217333 - 3217277
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||| |||||||||||| | ||| | |||||||||||||||||||    
T  3217333 tcatataagtgcttatgtataagctatttttgtaagagaagataaaataaagtcaaa 3217277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 10400165 - 10400252
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagat-aaaataaagtcaaa 102  Q
    |||||| ||||||||| |||||||   ||| |||||||| || |||| |||||||||||| ||||||||||||| ||||||||||||||    
T  10400165 tgtttggataaacaacataattaagggcttatcatataaatgtttatgtataagctattt-tataataaaagataaaaataaagtcaaa 10400252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 5564300 - 5564225
Alignment:
Q  18 ttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaat 93  Q
    ||||| ||||||||||||||| | ||| ||| |||||| || || |||||||||||||||||  ||||||||||||    
T  5564300 ttgaacaaacaacttaattaagcgcttatcacataagttctgatgtataagctatttatatagcaaaagataaaat 5564225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 323527 - 323573
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaa 96  Q
    |||||||||||| ||||||||||||||||||| |||| |||||||||    
T  323527 ataagtgcttatgtataagctatttatataatgaaaggtaaaataaa 323573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 781315 - 781364
Alignment:
Q  49 tataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    ||||||| || || |||||||||||| |||||||||||||||||||||||    
T  781315 tataagtactaatgtataagctatttctataataaaagataaaataaagt 781364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 2732403 - 2732338
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataa 80  Q
    |||||||||||||||||||||||| ||| | ||||  ||||| |||| |||||||||||| |||||    
T  2732403 tgtttgaataaacaacttaattaagcacctatcatgcaagtgtttatgtataagctatttttataa 2732338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 3169403 - 3169338
Alignment:
Q  31 ttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaa 96  Q
    ||||| |||||||| |||||||||||||||| | ||| |||||| ||||| ||||||| |||||||    
T  3169403 ttaatgaaacacttatcatataagtgcttatgtgtaacctatttctataacaaaagatgaaataaa 3169338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 33259744 - 33259797
Alignment:
Q  47 catataagtgcttatctataagctatttatataataaaagataaaataaagtca 100  Q
    ||||||||||||||| |||||||||||| ||||| |||||||||| | ||||||    
T  33259744 catataagtgcttatgtataagctatttttataacaaaagataaattgaagtca 33259797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 5551394 - 5551445
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||| |||| |||| ||||||||||||| |||||||||||||||||||||    
T  5551394 ataagtgattatgtata-gctatttatataacaaaagataaaataaagtcaaa 5551445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 7351751 - 7351699
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||||| ||||||| ||||| ||||||||||||||||  ||||||||||||    
T  7351751 tcatataaatgcttatgtataaactatttatataataaactataaaataaagt 7351699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 8420340 - 8420284
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||| || ||| ||||| | ||||||| |||||||||||||||||    
T  8420340 tcatataagtgcttatgtacaagttatttctttaataaatgataaaataaagtcaaa 8420284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 8470155 - 8470075
Alignment:
Q  22 ataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||||   ||| || |||||||||||||  ||||||||||| | ||| ||| || ||||||||||||||    
T  8470155 ataaacaacttaattaagtgcttatcgtataagtgcttataaataagctatttctgtaacaaatgagaaaataaagtcaaa 8470075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 10452503 - 10452447
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||| ||||||||| |||||||||||| ||||| |||| |||||||||| |||||    
T  10452503 tcatatcagtgcttatgtataagctatttctataacaaaatataaaataaaatcaaa 10452447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 11340799 - 11340716
Alignment:
Q  14 ttgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    ||||||| ||||| | ||||||||| | |||  ||||||||||||||| |||||| || || ||||| |||||||||||||||||    
T  11340799 ttgtttggataaagaccttaattaagcgctta-catataagtgcttatatataagataattctataacaaaagataaaataaagt 11340716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 24774685 - 24774741
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| ||||||||||| ||||| |||||| ||||| |||| ||||||||||||||||    
T  24774685 tcatgtaagtgcttatatataaactatttctataacaaaatataaaataaagtcaaa 24774741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 27984057 - 27984117
Alignment:
Q  18 ttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatat 78  Q
    ||||||||||||||||| ||| || || ||||||||| |||||  ||||||||||||||||    
T  27984057 ttgaataaacaacttaagtaaccatttatcatataagggcttacgtataagctatttatat 27984117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 28531684 - 28531628
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||| |||||||  | |||||| ||||||||||| |||||||||||||||||||||    
T  28531684 tcataaaagtgctcttgtataagttatttatataacaaaagataaaataaagtcaaa 28531628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 28660240 - 28660180
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaa 96  Q
    ||||||||| ||||||||||| |||| |||||  ||||| ||| |||||||||||||||||    
T  28660240 taaacacttatcatataagtgtttatatataaattatttttatgataaaagataaaataaa 28660180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 29274372 - 29274316
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||| || ||||||| |||||||||||| ||||  |||||||||||||||||||||    
T  29274372 tcatagaaatgcttatgtataagctatttctatagcaaaagataaaataaagtcaaa 29274316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 30817742 - 30817654
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgt-catataagtgcttatctataagcta-tttatataataaaagataaaataaagtcaa 101  Q
    |||||| ||||||||| |||||||  |||| | ||||||||||||||| |||| |||| ||| ||||| ||||| ||||||||||||||    
T  30817742 tgtttgtataaacaacataattaagaacttatacatataagtgcttatgtatatgctattttttataacaaaaggtaaaataaagtcaa 30817654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 282032 - 281936
Alignment:
Q  9 agacattgtttgaataaacaacttaattaaacacttgtcatataagtgct----tatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    |||||||||||| |||| |||| ||||||| || |  || |||||||| |    |||||||||||||||  ||||| ||||||||||||||||||||    
T  282032 agacattgtttggataagcaacataattaagcaatgatcgtataagtgtttatgtatctataagctattcctataacaaaagataaaataaagtcaa 281936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 4006610 - 4006697
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||| |||| |||||||||||| | ||| |   ||||||||||||  ||||| ||||| ||||| ||| |||||||||||||||||    
T  4006610 tgtttggataagcaacttaattaatcccttatagcataagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaa 4006697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 8010260 - 8010338
Alignment:
Q  22 ataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    |||||||||||||||||    || |||||||||||||||  |||||||||||| ||||| || | |||||||||||||||    
T  8010260 ataaacaacttaattaagtgtttatcatataagtgcttaggtataagctatttctataacaaca-ataaaataaagtcaa 8010338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 8420234 - 8420156
Alignment:
Q  206 ttatggaaatatgttgaaaacagcttatggacatggtgtcataagctatttcaataagccctcataaacaatctctcaagtg 287  Q
    ||||||||||| |||||||| ||||| ||||||   |||||||||||||||| |||||| ||||  |||| |||| ||||||    
T  8420234 ttatggaaataagttgaaaatagcttgtggaca---tgtcataagctatttctataagctctcactaacagtctcacaagtg 8420156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 9732404 - 9732459
Alignment:
Q  47 catataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||  ||||||||||| |||| |||| |||||||| ||||||||    
T  9732404 catataagtgcttatgcataagctatttctatattaaaggataaaattaagtcaaa 9732459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 21959655 - 21959710
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    ||||| |||||||||  ||||||||||||  |||| ||||||||||||||||||||    
T  21959655 tcatagaagtgcttaagtataagctatttccataacaaaagataaaataaagtcaa 21959710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 31461608 - 31461651
Alignment:
Q  49 tataagtgcttatctataagctatttatataataaaagataaaa 92  Q
    ||||||||||||| |||||||||||| ||||| |||||||||||    
T  31461608 tataagtgcttatgtataagctatttctataacaaaagataaaa 31461651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 31668828 - 31668781
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaat 93  Q
    |||||||||||||||| |||||||||||| ||||| |||| |||||||    
T  31668828 tcatataagtgcttatgtataagctatttctataacaaaacataaaat 31668781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 1810443 - 1810393
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaa 96  Q
    ||||||||||||||||  | ||||||||| ||||| |||||||||||||||    
T  1810443 tcatataagtgcttatgcaaaagctatttctataacaaaagataaaataaa 1810393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 4247777 - 4247731
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaa 92  Q
    |||| ||||||||||| |||||||||||| ||||| |||||||||||    
T  4247777 tcatgtaagtgcttatgtataagctatttctataacaaaagataaaa 4247731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 240
Target Start/End: Complemental strand, 9668022 - 9667988
Alignment:
Q  206 ttatggaaatatgttgaaaacagcttatggacatg 240  Q
    ||||||||||| |||||||||||||||||||||||    
T  9668022 ttatggaaataagttgaaaacagcttatggacatg 9667988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 24836340 - 24836286
Alignment:
Q  48 atataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||  |||| |||||| ||||| ||||| |||||||||||||||||||||    
T  24836340 atataagtatttatgtataagttatttctataacaaaagataaaataaagtcaaa 24836286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 26564949 - 26564888
Alignment:
Q  40 cacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||| ||||||||||||||||| |||||| |||| ||||| |||| | ||||||||||||||    
T  26564949 cacttatcatataagtgcttatccataagccatttctataacaaaa-acaaaataaagtcaaa 26564888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 27727227 - 27727165
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagcta-tttatataataaaagataaaataaag 97  Q
    ||||||||| |||||||||||||||| || ||| || ||| |||||| |||||||||||||||    
T  27727227 taaacacttatcatataagtgcttatatacaagttattttctataattaaagataaaataaag 27727165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 31420887 - 31420941
Alignment:
Q  48 atataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||| |||| |||||||||||| ||||||||| | ||||||||| |||||    
T  31420887 atataagtgtttatttataagctatttctataataaatggtaaaataaaatcaaa 31420941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 33416318 - 33416360
Alignment:
Q  52 aagtgcttatctataagctatttatataataaaagataaaata 94  Q
    |||||||||| |||||||||||| ||||| |||||||||||||    
T  33416318 aagtgcttatgtataagctatttttataacaaaagataaaata 33416360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 2027530 - 2027493
Alignment:
Q  65 taagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  2027530 taagctatttttataacaaaagataaaataaagtcaaa 2027493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 3204685 - 3204632
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtc 99  Q
    |||||||||||||||   |||| ||| || ||||||||||||||||||||||||    
T  3204685 tcatataagtgcttacgaataaactacttctataataaaagataaaataaagtc 3204632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 20672005 - 20671952
Alignment:
Q  49 tataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||| |||| |||||||||||| || |  |||||||||||||||||||||    
T  20672005 tataagtgattatgtataagctatttctagatcaaaagataaaataaagtcaaa 20671952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 29940729 - 29940778
Alignment:
Q  52 aagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    |||||||||  |||||||| ||| ||||| ||||||||||||||||||||    
T  29940729 aagtgcttaagtataagctttttctataacaaaagataaaataaagtcaa 29940778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 33385464 - 33385517
Alignment:
Q  47 catataagtgcttatctataagctatttatataataaaagataaaataaagtca 100  Q
    |||||||||||| || ||||||| |||| ||||| |||||||||||| ||||||    
T  33385464 catataagtgctgatgtataagcaatttttataacaaaagataaaatgaagtca 33385517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 264302 - 264350
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||||||||| |||||||||||| || |  |||||||||||||||||    
T  264302 ataagtgcttatatataagctatttctaaagcaaaagataaaataaagt 264350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 323742 - 323794
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||| || | |||||||||||| |||| |||||||||||||||| |||||    
T  323742 ataagtggttttgtataagctatttctatattaaaagataaaataaattcaaa 323794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 741011 - 740953
Alignment:
Q  46 tcatataagtgcttatctataagctatttat---ataataaaagataaaataaagtcaa 101  Q
    |||||||| ||||||| |||||||||||| |   |||| ||||||||||||||||||||    
T  741011 tcatataaatgcttatgtataagctattttttctataacaaaagataaaataaagtcaa 740953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 1345252 - 1345172
Alignment:
Q  22 ataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||| ||||||| || ||||  |||||||||||||||| |  | |||||||||| |  |||||||||| ||||||||||    
T  1345252 ataaactacttaatcaagcactaatcatataagtgcttatgtgcacgctatttatacaccaaaagataaattaaagtcaaa 1345172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 4325451 - 4325403
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaata 94  Q
    |||||||||||||||| | |||| ||||| ||||||||| |||||||||    
T  4325451 tcatataagtgcttatgtctaagttatttctataataaatgataaaata 4325403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 4420556 - 4420600
Alignment:
Q  58 ttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| ||||||||| || ||||| |||||||||||||||||||||    
T  4420556 ttatgtataagctacttctataacaaaagataaaataaagtcaaa 4420600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 5328901 - 5328957
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||| |||||||||  | |||| ||||| ||||| |||||||||||||||||||||    
T  5328901 tcataaaagtgcttacgtttaagttatttctataacaaaagataaaataaagtcaaa 5328957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 7713952 - 7714008
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||| |||||| ||||| ||| ||  |||| |||||||||||||||||||||    
T  7713952 tcatataagagcttatgtataaactactttcataacaaaagataaaataaagtcaaa 7714008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 9668159 - 9668075
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtc 99  Q
    |||||| |||||||| |||||||| | ||| | | || || |||||| |||||||||||| ||||| ||||||||| ||| ||||    
T  9668159 tgtttggataaacaatttaattaaccgcttataacatcagcgcttatatataagctatttgtataacaaaagataacatagagtc 9668075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 9833240 - 9833184
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||| |||||||| ||||| ||| | || | ||||||||||||||||    
T  9833240 tcatataagtgcttctctataagatatttctattacaataaataaaataaagtcaaa 9833184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 10154148 - 10154204
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||| | || ||||| ||| ||||  |||||||||||||||||||||    
T  10154148 tcatataagtgcttctgtacaagctgtttctatagaaaaagataaaataaagtcaaa 10154204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 24745366 - 24745406
Alignment:
Q  56 gcttatctataagctatttatataataaaagataaaataaa 96  Q
    ||||||||||||||||||| | ||| |||||||||||||||    
T  24745366 gcttatctataagctatttctgtaacaaaagataaaataaa 24745406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 29269823 - 29269879
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||| ||||| | ||||| |||||| ||||| | |||||||||||||||||||    
T  29269823 tcatataaatgcttgtgtataaactatttctataacagaagataaaataaagtcaaa 29269879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 31583686 - 31583746
Alignment:
Q  180 tgttttcaaaagctatccagtcgagtttatggaaatatgttgaaaacagcttatggacatg 240  Q
    |||||||| ||||||||| |   || ||||||||||| |||||||||| ||||||||||||    
T  31583686 tgttttcataagctatcccgaaaagcttatggaaataagttgaaaacaacttatggacatg 31583746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 32386242 - 32386190
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||||||||||||| ||||||||||||   | | |||||||||||||||||    
T  32386242 tcatataagtgcttatgtataagctatttcacttagaaaagataaaataaagt 32386190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 32843456 - 32843412
Alignment:
Q  48 atataagtgcttatctataagctatttatataataaaagataaaa 92  Q
    |||||||||||||| |||||| ||||| |||||||| ||||||||    
T  32843456 atataagtgcttatgtataagttatttctataataagagataaaa 32843412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 32975905 - 32975961
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||| |||| |||||| ||||| | ||| |||| ||||||||||||||||    
T  32975905 tcatataagtgtttatgtataagttatttctgtaacaaaatataaaataaagtcaaa 32975961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 3610893 - 3610827
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||||||||||||| |||||||||||| || || |||||||||||| ||| ||||    
T  3610893 taaacacttgtcatataagtgcttatgtataagctatttctacaacaaaagataaaatgaaggcaaa 3610827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 102
Target Start/End: Complemental strand, 3501100 - 3501053
Alignment:
Q  55 tgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  3501100 tgcttatgtataagctaattatataataaaagataaaataaagtcaaa 3501053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 35536011 - 35536090
Alignment:
Q  23 taaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||| | | ||| ||||||||  |||||| |||||||||||| ||||| | |||||||||||||||||||    
T  35536011 taaacaacttaattgagcgcttatcatataaaggcttatgtataagctatttctataacataagataaaataaagtcaaa 35536090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 28340985 - 28340931
Alignment:
Q  48 atataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||||||||||| ||||||| ||||||||||||| |||| ||||||||    
T  28340985 atataagtgcttatctatatgctatttttataataaaagatgaaatgaagtcaaa 28340931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 5276122 - 5276207
Alignment:
Q  17 tttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| ||||| ||||||||||| |  || || | ||||||||||| |||||||||||| ||||| ||||||||| |||||||||||    
T  5276122 tttggataaaaaacttaattaagcgtttatcgtttaagtgcttatgtataagctatttttataacaaaagataacataaagtcaaa 5276207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 7244629 - 7244685
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||| |||||||||||| ||||  ||||||||||| |||||||||    
T  7244629 tcatataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaaa 7244685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 8445213 - 8445269
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||| | |||||||||||| ||||| |||||||||||||||| ||||    
T  8445213 tcatataagtgcttgtttataagctatttttataacaaaagataaaataaagacaaa 8445269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 24973871 - 24973927
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||| || ||||||||| ||||| ||||||||||||||| |||||    
T  24973871 tcatataagtgcttatgtaaaagctatttctataacaaaagataaaataaattcaaa 24973927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 31341121 - 31341177
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| ||| ||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  31341121 tcatctaaatgcttatgtataagctatttgtataacaaaagataaaataaagtcaaa 31341177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 39549439 - 39549359
Alignment:
Q  16 gtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaa 96  Q
    ||||| ||||||||||||||||| || || |||| |||  |||||| |||||||||||| |||||| ||||| ||||||||    
T  39549439 gtttggataaacaacttaattaagcatttatcatgtaaacgcttatatataagctatttttataattaaagacaaaataaa 39549359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 27121759 - 27121673
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||| ||| |||||||||| || | ||| |||||||| | ||||| |||||| ||||| ||||||||| |||||||||||||||||    
T  27121759 tgtttggatacacaacttaat-aagcgcttatcatataattccttatgtataagatatttctataataaatgataaaataaagtcaaa 27121673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 29574776 - 29574689
Alignment:
Q  14 ttgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    |||||||| ||||||  |||||||| |  || |||||||| ||||||| |||||||||||| ||| | ||||||| ||||||||||||    
T  29574776 ttgtttgactaaacagtttaattaagcgtttatcatataaatgcttatgtataagctatttttatgacaaaagatgaaataaagtcaa 29574689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 39539935 - 39539848
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||| |||||||||||||||||   ||| |||||||| ||||| | ||||||||||||  ||||||||||  |||||||| |||||    
T  39539935 tgtttggataaacaacttaattaagtgcttatcatataactgcttttgtataagctatttcgataataaaagtgaaaataaattcaaa 39539848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 5005970 - 5005900
Alignment:
Q  26 acaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaa 96  Q
    ||||||||||||||| ||| |||| ||||||||||  |||||||||||| || || |||||||||| ||||    
T  5005970 acaacttaattaaacgcttatcatctaagtgcttacatataagctatttctacaacaaaagataaagtaaa 5005900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 9527243 - 9527177
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||| ||||| |||||||||| |||| ||||| | ||||| |||||||| ||||||||||||    
T  9527243 taaacacttatcatacaagtgcttatatatacgctatatctataacaaaagatataataaagtcaaa 9527177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 15328535 - 15328585
Alignment:
Q  48 atataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    ||||||||||||||  |||| |||||| |||||||||||||||||||||||    
T  15328535 atataagtgcttatgcataatctatttctataataaaagataaaataaagt 15328585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 5373152 - 5373205
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtc 99  Q
    |||| ||||||||||| |||| ||||||| ||||| ||||||||||||||||||    
T  5373152 tcatgtaagtgcttatgtatatgctatttctataacaaaagataaaataaagtc 5373205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 95
Target Start/End: Original strand, 33894550 - 33894599
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataa 95  Q
    |||| ||||||||||| |||||||||||| ||||| ||||||||||||||    
T  33894550 tcatgtaagtgcttatgtataagctatttctataacaaaagataaaataa 33894599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 42656453 - 42656498
Alignment:
Q  57 cttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||| |||||||||||| ||||| |||||||||||||||||||||    
T  42656453 cttatatataagctatttctataacaaaagataaaataaagtcaaa 42656498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 46213730 - 46213783
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtc 99  Q
    |||||||||||||||| || ||||||||| ||||| |||| |||||||||||||    
T  46213730 tcatataagtgcttatgtaaaagctatttctataacaaaatataaaataaagtc 46213783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 47134894 - 47134837
Alignment:
Q  38 aacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataa 95  Q
    |||||||  ||||||||| |||||||||||||||||| |||||  |||||||||||||    
T  47134894 aacacttaccatataagtccttatctataagctatttttataaccaaagataaaataa 47134837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 1417203 - 1417247
Alignment:
Q  58 ttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| ||||| |||||||||||| |||||||||||||||||||||    
T  1417203 ttatgtataaactatttatataacaaaagataaaataaagtcaaa 1417247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 3241368 - 3241424
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||||| || ||||||||| ||||| |||| | ||||||||||||||    
T  3241368 tcatataagtgcttatatagaagctatttctataacaaaataaaaaataaagtcaaa 3241424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 5269461 - 5269513
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||| |||||  ||||| | |||||||||||||||||||||||||    
T  5269461 ataagtgcttatatataaattatttctttaataaaagataaaataaagtcaaa 5269513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 22388057 - 22388001
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaa 92  Q
    ||||||||| |||| |||||||||||  ||||||||||| ||||| |||||||||||    
T  22388057 taaacacttatcatttaagtgcttatggataagctatttctataacaaaagataaaa 22388001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 45593862 - 45593806
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||| ||||||| |||||||||||| | ||| |||| ||||||||||||||||    
T  45593862 tcatataaatgcttatgtataagctatttctgtaacaaaacataaaataaagtcaaa 45593806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 47004014 - 47004070
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||| |||| | |||||||||| ||||| || ||||||||||||||||||    
T  47004014 tcatataagtgtttatatgtaagctatttctataacaatagataaaataaagtcaaa 47004070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 49060467 - 49060523
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||  |||| |||||||||||| ||||| |||| ||||||||||||||||    
T  49060467 tcatataagtatttatgtataagctatttctataacaaaaaataaaataaagtcaaa 49060523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 3802265 - 3802226
Alignment:
Q  63 tataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  3802265 tataagctatttctataataaaaggtaaaataaagtcaaa 3802226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 27548180 - 27548243
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtc 99  Q
    |||||| || || ||||||||||||||||||||||||||   ||  ||||||||||||||||||    
T  27548180 taaacatttatcttataagtgcttatctataagctatttccttagcaaaagataaaataaagtc 27548243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 30133980 - 30134031
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    ||||||| |||| |||||||||||| || || ||||||||||||||||||||    
T  30133980 ataagtgtttatgtataagctatttttacaacaaaagataaaataaagtcaa 30134031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 45813315 - 45813268
Alignment:
Q  54 gtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    |||||||| |||||||||||| ||||  ||||||||||||||||||||    
T  45813315 gtgcttatttataagctatttctataccaaaagataaaataaagtcaa 45813268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 5369863 - 5369793
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaa 85  Q
    |||||| |||||||| |||||||| |||||  || |||||||||||| ||||||||| || ||||| ||||    
T  5369863 tgtttggataaacaatttaattaagcacttagcaaataagtgcttatgtataagctaattctataaaaaaa 5369793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 7513562 - 7513612
Alignment:
Q  47 catataagtgcttatctataagctatttatataataaaagataaaataaag 97  Q
    ||||||||||||||| |||||||||||| ||  | ||||||||||||||||    
T  7513562 catataagtgcttatgtataagctatttttaagacaaaagataaaataaag 7513612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 21853293 - 21853207
Alignment:
Q  12 cattgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    ||||||||| ||||||| |||||||||  | || |  |||||||| |||| |||||| ||||| ||| | |||||||||||||||||    
T  21853293 cattgtttggataaacagcttaattaataatttatagtataagtgattatatataagttatttctattacaaaagataaaataaagt 21853207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 27496448 - 27496410
Alignment:
Q  202 gagtttatggaaatatgttgaaaacagcttatggacatg 240  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  27496448 gagtttatggaaataagctgaaaacagcttatggacatg 27496410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 27503106 - 27503068
Alignment:
Q  202 gagtttatggaaatatgttgaaaacagcttatggacatg 240  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  27503106 gagtttatggaaataagctgaaaacagcttatggacatg 27503068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 240
Target Start/End: Original strand, 29290370 - 29290400
Alignment:
Q  210 ggaaatatgttgaaaacagcttatggacatg 240  Q
    |||||||||||||||||||||||||||||||    
T  29290370 ggaaatatgttgaaaacagcttatggacatg 29290400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 35809041 - 35808991
Alignment:
Q  52 aagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||| |||| |||||||||||| ||||| ||||||||||||| |||||||    
T  35809041 aagtgtttatgtataagctatttctataacaaaagataaaatatagtcaaa 35808991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 2223078 - 2223131
Alignment:
Q  49 tataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||| |||| |||||||||||| ||||| ||||||||||  |||||||||    
T  2223078 tataagtgtttatgtataagctatttctataacaaaagataaagaaaagtcaaa 2223131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 28178913 - 28178950
Alignment:
Q  63 tataagctatttatataataaaagataaaataaagtca 100  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  28178913 tataagctatttctataacaaaagataaaataaagtca 28178950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 1423077 - 1423129
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||| |||| ||||||||||||  |||| ||||||||||||||| |||||    
T  1423077 ataagtgattatgtataagctattttcataacaaaagataaaataaattcaaa 1423129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 1431451 - 1431395
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||| |||| |||||| |||||  ||||| ||| ||||||||||||||||    
T  1431451 tcatataagtgtttatgtataagttatttccataatgaaaaataaaataaagtcaaa 1431395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 24363664 - 24363604
Alignment:
Q  180 tgttttcaaaagctatccagtcgagtttatggaaatatgttgaaaacagcttatggacatg 240  Q
    |||||||| ||||||||| |  ||| ||||||||||| | |||||||| ||||||||||||    
T  24363664 tgttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacatg 24363604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 30496635 - 30496687
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||| |||| ||||| |||||| ||||| |||| ||||||||||||||||    
T  30496635 ataagtgtttatgtataaactatttctataacaaaatataaaataaagtcaaa 30496687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 39334200 - 39334260
Alignment:
Q  180 tgttttcaaaagctatccagtcgagtttatggaaatatgttgaaaacagcttatggacatg 240  Q
    |||||||||||||||||| | |||| ||||||||||| | ||||  || ||||||||||||    
T  39334200 tgttttcaaaagctatcctggcgagcttatggaaataagctgaatgcaacttatggacatg 39334260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 39345478 - 39345538
Alignment:
Q  180 tgttttcaaaagctatccagtcgagtttatggaaatatgttgaaaacagcttatggacatg 240  Q
    |||||||||||||||||| | |||  ||||||||||| | ||||| || ||||||||||||    
T  39345478 tgttttcaaaagctatcctgacgaccttatggaaataagctgaaagcaacttatggacatg 39345538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 45078314 - 45078365
Alignment:
Q  209 tggaaatatgttgaaaacagcttatggacatggtgtcataagctatttcaataag 263  Q
    |||||||| |||||||||||||||||||||   ||||||||| |||||| |||||    
T  45078314 tggaaataagttgaaaacagcttatggaca---tgtcataagttatttctataag 45078365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 47528086 - 47528026
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaa 96  Q
    ||||||||| | ||| ||||| |||| |||||||||||| |||||| || |||||||||||    
T  47528086 taaacacttattatacaagtgtttatgtataagctatttctataattaaggataaaataaa 47528026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 6738560 - 6738494
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||| |||||||||| ||||| ||||||||||||  ||||||||||| ||||||||||||||    
T  6738560 taaacacttatcatataagtacttatgtataagctatttcaataataaaagacaaaataaagtcaaa 6738494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 11095643 - 11095557
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    |||||| ||||||||||||| |||||||||  |||||||||| |||| ||||| |||||| ||||| ||| |||| |||||||||||    
T  11095643 tgtttggataaacaacttaactaaacacttaccatataagtgattatgtataaactatttctataacaaatgatacaataaagtcaa 11095557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 7096270 - 7096214
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||| |||||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  7096270 tcatacaagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaa 7096214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 37063221 - 37063161
Alignment:
Q  42 cttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||| ||||||| ||||| |||||| ||||| |||||||||||||||||||||    
T  37063221 cttgtcatataaatgcttatgtataaactatttctataacaaaagataaaataaagtcaaa 37063161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 10391270 - 10391329
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataa 95  Q
    ||||||||| |||||||||||||||  |||||||||||| ||||| ||||||||||||||    
T  10391270 taaacacttatcatataagtgcttacgtataagctatttttataacaaaagataaaataa 10391329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 20982278 - 20982223
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    |||||||||||||||| |||||||||||| ||||| ||| ||||||||||||||||    
T  20982278 tcatataagtgcttatgtataagctatttctataacaaaggataaaataaagtcaa 20982223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 35095940 - 35095870
Alignment:
Q  32 taattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||| | ||| |||||||||||||||| | ||| |||||| ||||| |||||||||||||||||||||    
T  35095940 taattaagcgcttatcatataagtgcttatatttaaactatttctataacaaaagataaaataaagtcaaa 35095870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 40499848 - 40499764
Alignment:
Q  16 gtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtca 100  Q
    ||||| ||||||||||||||||||  ||| |||||||||||||||| || ||| ||||| ||||| ||| |||||| | ||||||    
T  40499848 gtttggataaacaacttaattaaaagcttatcatataagtgcttatgtacaagttatttctataacaaatgataaagtcaagtca 40499764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 4855594 - 4855677
Alignment:
Q  15 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||| |||||||||||||||||| |||| |   |||||| ||||| ||| |||||||| ||||| |||| ||||||||||||    
T  4855594 tgtttggataaacaacttaattaaatacttatagcataagtacttatgtattagctatttttataacaaaaaataaaataaagt 4855677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 29588797 - 29588856
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataa 95  Q
    ||||||||| | |||||||||||||| |||||||||||| ||||| |||| |||||||||    
T  29588797 taaacactttttatataagtgcttatgtataagctatttctataacaaaatataaaataa 29588856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 35135804 - 35135749
Alignment:
Q  47 catataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||| |||| |||||| ||||| ||||| |||||||||||||||||||||    
T  35135804 catataagtgtttatgtataagatatttctataacaaaagataaaataaagtcaaa 35135749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 36638644 - 36638719
Alignment:
Q  17 tttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaa 92  Q
    |||| ||||||||||||||||| ||||| ||||||| ||| | || ||||| |||||| ||||| |||||||||||    
T  36638644 tttggataaacaacttaattaagcacttatcatataggtgttaatgtataaactatttctataacaaaagataaaa 36638719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 11054123 - 11054165
Alignment:
Q  56 gcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||| |||||||||||| |||||||||||||||||||||||    
T  11054123 gcttatgtataagctatttctataataaaagataaaataaagt 11054165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 13224356 - 13224406
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaa 96  Q
    ||||| |||||||||| |||||||||||| ||||| |||||||||||||||    
T  13224356 tcatagaagtgcttatgtataagctatttctataacaaaagataaaataaa 13224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 26516225 - 26516275
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaa 96  Q
    |||||||||||||||| |||||||||||| || || |||||||||||||||    
T  26516225 tcatataagtgcttatgtataagctatttctaaaacaaaagataaaataaa 26516275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 39128568 - 39128622
Alignment:
Q  48 atataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||| |||||||| ||||||||| || ||||| |||||||||||||||||||||    
T  39128568 atatatgtgcttatgtataagctaattctataacaaaagataaaataaagtcaaa 39128622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 3951935 - 3951890
Alignment:
Q  48 atataagtgcttatctataagctatttatataataaaagataaaat 93  Q
    ||||||||||||||  ||||||||||||||||| ||||||||||||    
T  3951935 atataagtgcttatgaataagctatttatataacaaaagataaaat 3951890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 24084825 - 24084881
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||||| || |||||||||||| ||| ||||| |||||||| ||||||||    
T  24084825 tcatataagtgctcatgtataagctatttttatgataaacgataaaatcaagtcaaa 24084881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 29115366 - 29115302
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtca 100  Q
    |||||| || ||||| |||||||||| |||||||||||| || || ||||| |||||||||||||    
T  29115366 taaacatttatcataaaagtgcttatgtataagctatttctacaacaaaaggtaaaataaagtca 29115302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 29117105 - 29117017
Alignment:
Q  14 ttgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||| || |||| ||||||||| | ||| |||||||  || |||| |||| | ||||| ||||| |||||||||||||||||||||    
T  29117105 ttgtttgtatgaacatcttaattaagcgcttatcatatagctgattatgtatatgttatttctataacaaaagataaaataaagtcaaa 29117017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 34655819 - 34655779
Alignment:
Q  102 agctaaaaccaaactaccgaattagaaaaatggagtgctat 142  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  34655819 agctaaaaccaaactatcgaattggaaaaatggagtgctat 34655779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 35960341 - 35960397
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||  ||||  |||| |||||| |||||||||||||||||||||||||||    
T  35960341 tcatataagtatttatgcataaactatttctataataaaagataaaataaagtcaaa 35960397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 36539668 - 36539728
Alignment:
Q  41 acttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 101  Q
    |||| |||||||||||||||| | |||||||||| | ||  ||||||||||||||||||||    
T  36539668 acttatcatataagtgcttatgtgtaagctatttgtttatcaaaagataaaataaagtcaa 36539728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 37611337 - 37611293
Alignment:
Q  43 ttgtcatataagtgcttatctataagctatttatataataaaaga 87  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||    
T  37611337 ttgtcatataagtgcttatgtaaaagctatttctataataaaaga 37611293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 37788067 - 37788023
Alignment:
Q  43 ttgtcatataagtgcttatctataagctatttatataataaaaga 87  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||    
T  37788067 ttgtcatataagtgcttatgtaaaagctatttctataataaaaga 37788023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 38829772 - 38829724
Alignment:
Q  52 aagtgcttatctataagctatttatataataaaagataaaataaagtca 100  Q
    |||||||||| ||||| |||||| |||||||||||||||||| ||||||    
T  38829772 aagtgcttatatataacctatttttataataaaagataaaattaagtca 38829724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 10363108 - 10363147
Alignment:
Q  63 tataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  10363108 tataatctatttatatgataaaagataaaataaagtcaaa 10363147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 11615452 - 11615491
Alignment:
Q  63 tataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  11615452 tataagctatttttataacaaaagataaaataaagtcaaa 11615491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 19460050 - 19460101
Alignment:
Q  47 catataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    ||||||||||||||||||||  ||| || ||||| |||||||||||||||||    
T  19460050 catataagtgcttatctatacactacttttataacaaaagataaaataaagt 19460101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 12425508 - 12425550
Alignment:
Q  56 gcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||| ||||| ||||||||||| ||||||||||||||||||    
T  12425508 gcttatgtataaactatttatatagtaaaagataaaataaagt 12425550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 34198333 - 34198387
Alignment:
Q  17 tttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagcta 71  Q
    |||| |||| |||||||||||| ||||| |||||||||||||||| || ||||||    
T  34198333 tttggataatcaacttaattaagcacttatcatataagtgcttatgtacaagcta 34198387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 34690801 - 34690855
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtca 100  Q
    |||| ||||| ||||| |||| ||||||| ||||| |||||||||||||||||||    
T  34690801 tcatttaagtccttatgtatacgctatttctataacaaaagataaaataaagtca 34690855  T

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Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 706393 - 706438
Alignment:
Q  49 tataagtgcttatctataagctatttatataataaaagataaaata 94  Q
    |||||| |||||| |||||||||||| |||| ||||||||||||||    
T  706393 tataagcgcttatgtataagctatttctatagtaaaagataaaata 706438  T

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Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 12407824 - 12407752
Alignment:
Q  25 aacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||| ||| ||| | ||| ||||| ||||| |||| |||||||||||| ||||| |||||||||||||||||    
T  12407824 aacaacataactaagctcttatcatacaagtg-ttatgtataagctatttctataacaaaagataaaataaagt 12407752  T

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Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 16945121 - 16945076
Alignment:
Q  49 tataagtgcttatctataagctatttatataataaaagataaaata 94  Q
    ||||||||||||| |||||||||||| || || |||||||||||||    
T  16945121 tataagtgcttatgtataagctatttctacaagaaaagataaaata 16945076  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 98
Target Start/End: Original strand, 8481169 - 8481197
Alignment:
Q  70 tatttatataataaaagataaaataaagt 98  Q
    |||||||||||||||||||||||||||||    
T  8481169 tatttatataataaaagataaaataaagt 8481197  T

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Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 9202887 - 9202839
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||||||||| |||||||||||| | ||  |||||||||||||||||    
T  9202887 ataagtgcttatatataagctatttctgtagcaaaagataaaataaagt 9202839  T

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Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 11684350 - 11684398
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaata 94  Q
    ||||||||||||| || |||||||||||| ||||| |||| ||||||||    
T  11684350 tcatataagtgctaatgtataagctatttttataacaaaatataaaata 11684398  T

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Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 28586909 - 28586853
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||| ||| |||| ||||  |||||| ||||| |||||||||||||||||||||    
T  28586909 tcatatatgtggttatgtatacactatttctataacaaaagataaaataaagtcaaa 28586853  T

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Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 28776906 - 28776954
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||||||||| |||||||||||| |||   |||||||||||||||||    
T  28776906 ataagtgcttatgtataagctatttttattgaaaaagataaaataaagt 28776954  T

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Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 29014683 - 29014739
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||| | || |||||||||||| ||| ||||| |||||||| ||||||||    
T  29014683 tcatataagtgttcatgtataagctatttttatgataaacgataaaatcaagtcaaa 29014739  T

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Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 29590670 - 29590634
Alignment:
Q  202 gagtttatggaaatatgttgaaaacagcttatggaca 238  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  29590670 gagtttatggaaataagttgaaaacaacttatggaca 29590634  T

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Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 31694445 - 31694501
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||||||||  ||||||||| | ||||| |||| ||||| ||||||||||    
T  31694445 tcatataagtgcttatgaataagctatgtctataacaaaacataaactaaagtcaaa 31694501  T

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Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 38819724 - 38819672
Alignment:
Q  40 cacttgtcatataagtgcttatctataagctatttatataataaaagataaaa 92  Q
    ||||| ||||||||| |||||| |||| ||||||| ||||| |||||||||||    
T  38819724 cacttatcatataagggcttatgtatacgctatttctataacaaaagataaaa 38819672  T

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Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 38831587 - 38831543
Alignment:
Q  58 ttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| |||||||||||| | | |||||||||||||||||||||||    
T  38831587 ttatatataagctatttctgttataaaagataaaataaagtcaaa 38831543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 39257529 - 39257473
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||| ||||||||||| |||| ||||| | ||||| ||||| |||||||||||||||    
T  39257529 tcatgtaagtgcttatgtatatgctatctctataacaaaaggtaaaataaagtcaaa 39257473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 102
Target Start/End: Complemental strand, 39823240 - 39823208
Alignment:
Q  70 tatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||||||| |||||||||||||||||||||    
T  39823240 tatttatataacaaaagataaaataaagtcaaa 39823208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 40048419 - 40048371
Alignment:
Q  50 ataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    |||||||||||| |||||| | ||| ||||| |||||||||||||||||    
T  40048419 ataagtgcttatgtataagttgtttctataacaaaagataaaataaagt 40048371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 6813 - 6724
Alignment:
Q  14 ttgtttgaataaacaacttaat-taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||| |||||||||||||| ||| ||||| |||||||||||||||| ||||| |||||| ||||| |||| ||||| | ||||||||    
T  6813 ttgtttggataaacaacttaatataagcacttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaaa 6724  T

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Target: scaffold0014 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 116732 - 116643
Alignment:
Q  14 ttgtttgaataaacaacttaat-taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    ||||||| |||||||||||||| ||| ||||| |||||||||||||||| ||||| |||||| ||||| |||| ||||| | ||||||||    
T  116732 ttgtttggataaacaacttaatataagcacttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaaa 116643  T

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Target: scaffold0060 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 63428 - 63372
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||||| | |||||||||||| ||||| |||||||||||||||| ||||    
T  63428 tcatataagtgcttgtttataagctatttttataacaaaagataaaataaagacaaa 63372  T

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Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 185024 - 185064
Alignment:
Q  102 agctaaaaccaaactaccgaattagaaaaatggagtgctat 142  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  185024 agctaaaaccaaactaccgaattggaaaaatggagtgctat 185064  T

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Target: scaffold0549 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 1898 - 1815
Alignment:
Q  14 ttgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    ||||||| ||||| | ||||||||| | |||  ||||||||||||||| |||||| || || ||||| |||||||||||||||||    
T  1898 ttgtttggataaagaccttaattaagcgctta-catataagtgcttatatataagataattctataacaaaagataaaataaagt 1815  T

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Target: scaffold0549; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 3988 - 3905
Alignment:
Q  14 ttgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagt 98  Q
    ||||||| ||||| | ||||||||| | |||  ||||||||||||||| |||||| || || ||||| |||||||||||||||||    
T  3988 ttgtttggataaagaccttaattaagcgctta-catataagtgcttatatataagataattctataacaaaagataaaataaagt 3905  T

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Target: scaffold0085 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 34140 - 34084
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||| ||||||| |||||| | | | |||||||||||||||||||||||||||    
T  34140 tcatataactgcttatatataaggtgtatttataataaaagataaaataaagtcaaa 34084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 5806 - 5744
Alignment:
Q  36 taaacacttgtcatataagtgcttatctataagcta-tttatataataaaagataaaataaag 97  Q
    ||||||||| |||||||||||||||| || ||| || ||| |||||| |||||||||||||||    
T  5806 taaacacttatcatataagtgcttatatacaagttattttctataattaaagataaaataaag 5744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 3832 - 3885
Alignment:
Q  47 catataagtgcttatctataagctatttatataataaaagataaaataaagtca 100  Q
    ||||||||||||||| | |||||||||| ||||| |||||||||| | ||||||    
T  3832 catataagtgcttatgtgtaagctatttttataacaaaagataaactgaagtca 3885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 10987 - 11036
Alignment:
Q  43 ttgtcatataagtgcttatctataagctatttatataataaaagataaaa 92  Q
    |||||||||||||| |||| ||||| |||||| || ||||||||||||||    
T  10987 ttgtcatataagtgtttatatataaactatttctagaataaaagataaaa 11036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 4367 - 4310
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaa-agataaaataaagtcaaa 102  Q
    ||||||| |||||||| ||||| |||||| ||||| ||| ||||||||||||||||||    
T  4367 tcatatatgtgcttatatataatctatttctataaaaaagagataaaataaagtcaaa 4310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 42544 - 42592
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaata 94  Q
    |||||||||||||||| ||||||  |||| ||||| |||||||||||||    
T  42544 tcatataagtgcttatgtataagtcatttctataacaaaagataaaata 42592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 4899 - 4955
Alignment:
Q  46 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 102  Q
    |||||||||||| ||| |||||||||||| |||||||| | |||||| ||| |||||    
T  4899 tcatataagtgcctatatataagctatttctataataatatataaaacaaattcaaa 4955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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