View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21553_low_26 (Length: 504)

Name: NF21553_low_26
Description: NF21553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21553_low_26
NF21553_low_26
[»] chr6 (8 HSPs)
chr6 (51-373)||(34360556-34360878)
chr6 (344-486)||(34360414-34360556)
chr6 (152-193)||(8374226-8374267)
chr6 (153-190)||(11102197-11102234)
chr6 (152-188)||(9727584-9727620)
chr6 (152-188)||(14465828-14465864)
chr6 (152-188)||(22721342-22721378)
chr6 (150-186)||(31642689-31642725)
[»] chr3 (14 HSPs)
chr3 (13-84)||(25291386-25291457)
chr3 (152-190)||(6419668-6419706)
chr3 (152-193)||(43904498-43904539)
chr3 (152-188)||(46316480-46316516)
chr3 (153-190)||(23525912-23525949)
chr3 (160-193)||(29216890-29216923)
chr3 (152-193)||(47570367-47570408)
chr3 (152-193)||(49285592-49285633)
chr3 (152-188)||(11250047-11250083)
chr3 (152-192)||(20625655-20625695)
chr3 (152-188)||(35359806-35359842)
chr3 (152-188)||(35966331-35966367)
chr3 (152-188)||(36518189-36518225)
chr3 (152-188)||(36540194-36540230)
[»] chr7 (11 HSPs)
chr7 (152-193)||(30552488-30552529)
chr7 (152-188)||(31299998-31300034)
chr7 (152-190)||(2228083-2228121)
chr7 (152-190)||(31807052-31807090)
chr7 (152-190)||(40857345-40857383)
chr7 (152-193)||(38261085-38261126)
chr7 (152-188)||(27339731-27339767)
chr7 (152-188)||(40677107-40677143)
chr7 (152-188)||(43188621-43188657)
chr7 (152-188)||(44327729-44327765)
chr7 (152-188)||(45594889-45594925)
[»] chr4 (17 HSPs)
chr4 (152-193)||(939671-939712)
chr4 (152-193)||(7413176-7413217)
chr4 (152-193)||(7459256-7459297)
chr4 (153-193)||(17518477-17518517)
chr4 (160-190)||(5060423-5060453)
chr4 (152-190)||(31633860-31633898)
chr4 (152-194)||(49652071-49652113)
chr4 (152-193)||(28983816-28983857)
chr4 (160-193)||(35615969-35616002)
chr4 (152-189)||(54065282-54065319)
chr4 (152-188)||(9064791-9064827)
chr4 (152-188)||(16971685-16971721)
chr4 (152-188)||(32233701-32233737)
chr4 (152-188)||(47462039-47462075)
chr4 (146-186)||(48860093-48860133)
chr4 (152-188)||(51425416-51425452)
chr4 (152-188)||(54864485-54864521)
[»] chr1 (7 HSPs)
chr1 (152-193)||(23913692-23913733)
chr1 (152-188)||(22561161-22561197)
chr1 (153-193)||(23809888-23809928)
chr1 (152-188)||(42630988-42631024)
chr1 (152-188)||(49500950-49500986)
chr1 (152-188)||(49948330-49948366)
chr1 (152-188)||(50145135-50145171)
[»] chr5 (14 HSPs)
chr5 (152-188)||(21067526-21067562)
chr5 (150-193)||(4429942-4429985)
chr5 (152-188)||(972597-972633)
chr5 (152-188)||(1277527-1277563)
chr5 (152-188)||(5203642-5203678)
chr5 (152-188)||(17986057-17986093)
chr5 (152-188)||(23219117-23219153)
chr5 (152-188)||(26310751-26310787)
chr5 (152-188)||(27003966-27004002)
chr5 (153-193)||(29069712-29069752)
chr5 (152-188)||(32273981-32274017)
chr5 (152-188)||(36136865-36136901)
chr5 (149-193)||(37320333-37320377)
chr5 (152-188)||(40596045-40596081)
[»] chr2 (9 HSPs)
chr2 (152-188)||(36685406-36685442)
chr2 (146-188)||(16534940-16534982)
chr2 (152-193)||(10202254-10202295)
chr2 (152-193)||(31819722-31819763)
chr2 (152-188)||(7957989-7958025)
chr2 (152-188)||(15488838-15488874)
chr2 (152-188)||(18055948-18055984)
chr2 (152-188)||(19967823-19967859)
chr2 (152-188)||(43461337-43461373)
[»] scaffold0014 (1 HSPs)
scaffold0014 (150-188)||(195830-195868)
[»] chr8 (15 HSPs)
chr8 (152-190)||(10286468-10286506)
chr8 (152-193)||(13634930-13634971)
chr8 (152-193)||(13735343-13735384)
chr8 (160-193)||(24430144-24430177)
chr8 (152-193)||(41897908-41897949)
chr8 (152-188)||(3673846-3673882)
chr8 (152-188)||(5917371-5917407)
chr8 (152-188)||(14725391-14725427)
chr8 (152-188)||(15129723-15129759)
chr8 (152-188)||(20150310-20150346)
chr8 (152-188)||(20662611-20662647)
chr8 (153-193)||(24420005-24420045)
chr8 (152-188)||(34642440-34642476)
chr8 (152-188)||(35058414-35058450)
chr8 (150-190)||(44225274-44225314)
[»] scaffold0057 (1 HSPs)
scaffold0057 (152-188)||(64372-64408)


Alignment Details
Target: chr6 (Bit Score: 259; Significance: 1e-144; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 51 - 373
Target Start/End: Complemental strand, 34360878 - 34360556
Alignment:
Q  51 tataccttgaaatgcatggttaacttaattgtttaacaggatcagtctttgtatagcggcaattgagaaattgtatgcggcgggagtggtttaagtggat 150  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |    
T  34360878 tataccctgaaatgcatggttaacataattgtttaacaggatcagtctttgtatagcgggaattgagaaactgtatgcggcgggagtggtttaagtgggt 34360779  T
Q  151 tgatagaccaaatgacaaagttattataaactcacacatataattaaatgtatgtgtcggcgtttaaactacggtcgatannnnnnnatttgttgagtta 250  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||    
T  34360778 tgatagaccaaatgacaaagtcattataaactcacacatataattaaatgtatgtgtcggcgtttaaactacggtcgatatttttttatttgttgagtta 34360679  T
Q  251 -gactggtagacaaaaattaacatttttaatgtacggaagtaaagttataaaaggattagaagaagcaaaagaatgtaaatttattccattgataattag 349  Q
     |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34360678 tgactggtagacaaaaactaacatttttaatgtacggaagtaaagttataaaaggattagaagaagcaaaagaatgtaaatttattccatt-ataattag 34360580  T
Q  350 aaatttaaaatttgaaaaggaaaa 373  Q
    ||||||||||||||||||||||||    
T  34360579 aaatttaaaatttgaaaaggaaaa 34360556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 344 - 486
Target Start/End: Complemental strand, 34360556 - 34360414
Alignment:
Q  344 aattagaaatttaaaatttgaaaaggaaaagatgttaaaagaaattcaacaaatcaattcaacacattaaaagataatttacttacatatatactccaat 443  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  34360556 aatttgaaatttaaaatttgaaaaggaaaaaatgttaaaagaaattcaacaaatcaattcaacacattgaaagataatttgcttacatatatactccaat 34360457  T
Q  444 caaagtgcatttgtacaaattcctccatgcttatatactggta 486  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  34360456 caaagtgtatttgtacaaattcctccatgcttatatactggta 34360414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 8374267 - 8374226
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacatataa 193  Q
    ||||||| |||||||||||  |||||||||||||||||||||    
T  8374267 gatagacaaaatgacaaagccattataaactcacacatataa 8374226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 11102234 - 11102197
Alignment:
Q  153 atagaccaaatgacaaagttattataaactcacacata 190  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  11102234 atagacgaaatgacaaagttatcataaactcacacata 11102197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 9727620 - 9727584
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  9727620 gatagacgaaatgacaaagtcattataaactcacaca 9727584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 14465828 - 14465864
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  14465828 gatagacgaaatgacaaagtcattataaactcacaca 14465864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 22721378 - 22721342
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  22721378 gatagacgaaatgacaaagtcattataaactcacaca 22721342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 31642689 - 31642725
Alignment:
Q  150 ttgatagaccaaatgacaaagttattataaactcaca 186  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  31642689 ttgatagacgaaatgacaaagttaatataaactcaca 31642725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 25291457 - 25291386
Alignment:
Q  13 ctcctccatattgttcaagccacatgaatttcaacagctataccttgaaatgcatggttaacttaattgttt 84  Q
    ||||||||| ||||||  || ||||||||||||||||||||||| |||||| ||| |||||| |||||||||    
T  25291457 ctcctccatgttgttcctgctacatgaatttcaacagctataccatgaaatacatagttaacataattgttt 25291386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 6419668 - 6419706
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacata 190  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  6419668 gatagacgaaatgacaaagttattataaactcacacata 6419706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 43904498 - 43904539
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacatataa 193  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  43904498 gatagacgaaatgacaaagttattataaactcacacacataa 43904539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 46316480 - 46316516
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||||||||||||||||||||    
T  46316480 gatagacgaaatgacaaagttattataaactcacaca 46316516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 23525912 - 23525949
Alignment:
Q  153 atagaccaaatgacaaagttattataaactcacacata 190  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  23525912 atagacgaaatgacaaagtcattataaactcacacata 23525949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 29216923 - 29216890
Alignment:
Q  160 aaatgacaaagttattataaactcacacatataa 193  Q
    ||||||||||||||||||||||||||||| ||||    
T  29216923 aaatgacaaagttattataaactcacacacataa 29216890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 47570408 - 47570367
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacatataa 193  Q
    ||||||| |||||||||||| |||||||||||||||| ||||    
T  47570408 gatagacaaaatgacaaagtcattataaactcacacacataa 47570367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 49285633 - 49285592
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacatataa 193  Q
    ||||||| |||||||||||| |||||||||||||||| ||||    
T  49285633 gatagacgaaatgacaaagtcattataaactcacacacataa 49285592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 11250083 - 11250047
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  11250083 gatagacgaaatgacaaagtcattataaactcacaca 11250047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 20625655 - 20625695
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacatata 192  Q
    ||||||| |||||||||||| ||| ||||||||||||||||    
T  20625655 gatagacgaaatgacaaagtcattgtaaactcacacatata 20625695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 35359842 - 35359806
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  35359842 gatagacgaaatgacaaagtcattataaactcacaca 35359806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 35966367 - 35966331
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  35966367 gatagacgaaatgacaaagtcattataaactcacaca 35966331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 36518225 - 36518189
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  36518225 gatagacgaaatgacaaagtcattataaactcacaca 36518189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 36540230 - 36540194
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  36540230 gatagacgaaatgacaaagtcattataaactcacaca 36540194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000007; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 30552529 - 30552488
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacatataa 193  Q
    ||||||| |||||||||||||||||||||||||| |||||||    
T  30552529 gatagacgaaatgacaaagttattataaactcacgcatataa 30552488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 31299998 - 31300034
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||||||||||||||||||||    
T  31299998 gatagacgaaatgacaaagttattataaactcacaca 31300034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 2228083 - 2228121
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacata 190  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  2228083 gatagacgaaatgacaaagtcattataaactcacacata 2228121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 31807052 - 31807090
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacata 190  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  31807052 gatagacgaaatgacaaagtcattataaactcacacata 31807090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 40857345 - 40857383
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacata 190  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  40857345 gatagacgaaatgacaaagttattataaattcacacata 40857383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 38261126 - 38261085
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacatataa 193  Q
    ||||||| |||||||||||| |||||||||||||||| ||||    
T  38261126 gatagacgaaatgacaaagtcattataaactcacacacataa 38261085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 27339731 - 27339767
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  27339731 gatagacgaaatgacaaagtcattataaactcacaca 27339767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 40677143 - 40677107
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  40677143 gatagacgaaatgacaaagctattataaactcacaca 40677107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 43188657 - 43188621
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  43188657 gatagacgaaatgacaaagtcattataaactcacaca 43188621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 44327765 - 44327729
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  44327765 gatagacgaaatgacaaagctattataaactcacaca 44327729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 45594925 - 45594889
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  45594925 gatagacgaaatgacaaagtcattataaactcacaca 45594889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000007; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 939712 - 939671
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacatataa 193  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  939712 gatagacgaaatgacaaagttattataaactcacacacataa 939671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 7413217 - 7413176
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacatataa 193  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  7413217 gatagacgaaatgacaaagtcattataaactcacacatataa 7413176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 7459297 - 7459256
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacatataa 193  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  7459297 gatagacgaaatgacaaagtcattataaactcacacatataa 7459256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 17518477 - 17518517
Alignment:
Q  153 atagaccaaatgacaaagttattataaactcacacatataa 193  Q
    |||||| ||||||||||||||||||||||||||||| ||||    
T  17518477 atagacgaaatgacaaagttattataaactcacacacataa 17518517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 5060423 - 5060453
Alignment:
Q  160 aaatgacaaagttattataaactcacacata 190  Q
    |||||||||||||||||||||||||||||||    
T  5060423 aaatgacaaagttattataaactcacacata 5060453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 31633898 - 31633860
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacata 190  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  31633898 gatagacgaaatgacaaatttattataaactcacacata 31633860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 49652071 - 49652113
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacatataat 194  Q
    ||||||| ||||||||||  |||||||||||||||||||||||    
T  49652071 gatagacgaaatgacaaaactattataaactcacacatataat 49652113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 28983857 - 28983816
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacatataa 193  Q
    ||||||| |||||||||||| |||||||||||||||| ||||    
T  28983857 gatagacaaaatgacaaagtcattataaactcacacacataa 28983816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 35616002 - 35615969
Alignment:
Q  160 aaatgacaaagttattataaactcacacatataa 193  Q
    ||||||||||||||||||||||||||||| ||||    
T  35616002 aaatgacaaagttattataaactcacacacataa 35615969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 54065282 - 54065319
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacat 189  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  54065282 gatagacgaaatgacaaagttattgtaaactcacacat 54065319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 9064791 - 9064827
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  9064791 gatagacaaaatgacaaagtcattataaactcacaca 9064827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 16971685 - 16971721
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    |||||||  ||||||||||||||||||||||||||||    
T  16971685 gatagacggaatgacaaagttattataaactcacaca 16971721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 32233737 - 32233701
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  32233737 gatagacgaaatgacaaagtcattataaactcacaca 32233701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 47462039 - 47462075
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  47462039 gatagacgaaatgacaaagtcattataaactcacaca 47462075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 186
Target Start/End: Complemental strand, 48860133 - 48860093
Alignment:
Q  146 tggattgatagaccaaatgacaaagttattataaactcaca 186  Q
    ||||| ||||||| |||||||||||| ||||||||||||||    
T  48860133 tggatagatagacgaaatgacaaagtcattataaactcaca 48860093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 51425452 - 51425416
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  51425452 gatagacgaaatgacaaagtcattataaactcacaca 51425416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 54864521 - 54864485
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  54864521 gatagacgaaatgacaaagtcattataaactcacaca 54864485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000007; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 23913733 - 23913692
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacatataa 193  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  23913733 gatagacaaaatgacaaagttattataaactcacacacataa 23913692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 22561161 - 22561197
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||||||||||||||||||||    
T  22561161 gatagacaaaatgacaaagttattataaactcacaca 22561197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 23809888 - 23809928
Alignment:
Q  153 atagaccaaatgacaaagttattataaactcacacatataa 193  Q
    |||||| |||||||||||| |||||||||||||||| ||||    
T  23809888 atagacaaaatgacaaagtcattataaactcacacacataa 23809928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 42630988 - 42631024
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  42630988 gatagacgaaatgacaaagtcattataaactcacaca 42631024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 49500986 - 49500950
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  49500986 gatagacgaaatgacaaagctattataaactcacaca 49500950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 49948366 - 49948330
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  49948366 gatagacgaaatgacaaagtcattataaactcacaca 49948330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 50145135 - 50145171
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  50145135 gatagacgaaatgacaaagtcattataaactcacaca 50145171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000003; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 21067562 - 21067526
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||||||||||||||||||||    
T  21067562 gatagacgaaatgacaaagttattataaactcacaca 21067526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 4429942 - 4429985
Alignment:
Q  150 ttgatagaccaaatgacaaagttattataaactcacacatataa 193  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||    
T  4429942 ttgatagacgaaatgataaagttattataaactcacacacataa 4429985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 972597 - 972633
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  972597 gatagacgaaatgacaaagtcattataaactcacaca 972633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 1277563 - 1277527
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  1277563 gatagacgaaatgacaaagtcattataaactcacaca 1277527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 5203678 - 5203642
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  5203678 gatagacaaaatgacaaagtcattataaactcacaca 5203642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 17986057 - 17986093
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  17986057 gatagacgaaatgacaaagctattataaactcacaca 17986093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 23219117 - 23219153
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  23219117 gatagacgaaatgacaaagtcattataaactcacaca 23219153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 26310751 - 26310787
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  26310751 gatagacgaaatgacaaagtcattataaactcacaca 26310787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 27003966 - 27004002
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  27003966 gatagacgaaatgacaaagtcattataaactcacaca 27004002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 29069752 - 29069712
Alignment:
Q  153 atagaccaaatgacaaagttattataaactcacacatataa 193  Q
    |||||| ||||||||||| | ||||||||||||||||||||    
T  29069752 atagacgaaatgacaaagctgttataaactcacacatataa 29069712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 32273981 - 32274017
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  32273981 gatagacgaaatgacaaagtcattataaactcacaca 32274017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 36136865 - 36136901
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  36136865 gatagacgaaatgacaaaattattataaactcacaca 36136901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 37320377 - 37320333
Alignment:
Q  149 attgatagaccaaatgacaaagttattataaactcacacatataa 193  Q
    |||||||||  |||||||||| | |||||||||||||||||||||    
T  37320377 attgatagaagaaatgacaaaataattataaactcacacatataa 37320333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 40596081 - 40596045
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  40596081 gatagacgaaatgacaaagtcattataaactcacaca 40596045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000003; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 36685406 - 36685442
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||||||||||||||||||||    
T  36685406 gatagacgaaatgacaaagttattataaactcacaca 36685442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 16534940 - 16534982
Alignment:
Q  146 tggattgatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||| ||||||| ||||||||||| |||||||||||||||||    
T  16534940 tggatagatagacgaaatgacaaagctattataaactcacaca 16534982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 10202295 - 10202254
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacatataa 193  Q
    ||||||| |||||||||||  |||||||||||||||||||||    
T  10202295 gatagacgaaatgacaaagccattataaactcacacatataa 10202254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 31819763 - 31819722
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacatataa 193  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||    
T  31819763 gatagacgaaatgacaaagctattataaactcacacacataa 31819722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 7957989 - 7958025
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  7957989 gatagacgaaatgacaaagctattataaactcacaca 7958025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 15488874 - 15488838
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  15488874 gatagacgaaatgacaaagtcattataaactcacaca 15488838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 18055984 - 18055948
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  18055984 gatagacgaaatgacaaagtcattataaactcacaca 18055948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 19967859 - 19967823
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  19967859 gatagacgaaatgacaaagtcattataaactcacaca 19967823  T

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Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 43461337 - 43461373
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  43461337 gatagacgaaatgacaaagtcattataaactcacaca 43461373  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 188
Target Start/End: Complemental strand, 195868 - 195830
Alignment:
Q  150 ttgatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  195868 ttgatagacgaaatgacaaagtcattataaactcacaca 195830  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000004; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 10286468 - 10286506
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacata 190  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  10286468 gatagacgaaatgacaaagtcattataaactcacacata 10286506  T

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Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 13634971 - 13634930
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacatataa 193  Q
    ||||||| |||||||||||| |||||||||||||||| ||||    
T  13634971 gatagacaaaatgacaaagtcattataaactcacacacataa 13634930  T

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Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 13735384 - 13735343
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacatataa 193  Q
    ||||||| |||||||||||| |||||||||||||||| ||||    
T  13735384 gatagacaaaatgacaaagtcattataaactcacacacataa 13735343  T

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Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 24430177 - 24430144
Alignment:
Q  160 aaatgacaaagttattataaactcacacatataa 193  Q
    |||||| |||||||||||||||||||||||||||    
T  24430177 aaatgataaagttattataaactcacacatataa 24430144  T

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Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 41897949 - 41897908
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacacatataa 193  Q
    ||||||| |||||||||| |||||||||||||||||| ||||    
T  41897949 gatagacgaaatgacaaaattattataaactcacacacataa 41897908  T

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Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 3673846 - 3673882
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  3673846 gatagacgaaatgacaaagtcattataaactcacaca 3673882  T

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Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 5917407 - 5917371
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  5917407 gatagacgaaatgacaaagtcattataaactcacaca 5917371  T

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Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 14725427 - 14725391
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  14725427 gatagacgaaatgacaaagtcattataaactcacaca 14725391  T

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Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 15129759 - 15129723
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  15129759 gatagacgaaatgacaaagctattataaactcacaca 15129723  T

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Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 20150346 - 20150310
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  20150346 gatagacgaaatgacaaagctattataaactcacaca 20150310  T

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Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 20662647 - 20662611
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  20662647 gatagacgaaatgacaaagtcattataaactcacaca 20662611  T

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Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 24420005 - 24420045
Alignment:
Q  153 atagaccaaatgacaaagttattataaactcacacatataa 193  Q
    |||||| ||||| ||||||||||||||||||||||| ||||    
T  24420005 atagacgaaatggcaaagttattataaactcacacagataa 24420045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 34642440 - 34642476
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  34642440 gatagacgaaatgacaaagtcattataaactcacaca 34642476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 35058450 - 35058414
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  35058450 gatagacgaaatgacaaagtcattataaactcacaca 35058414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 44225314 - 44225274
Alignment:
Q  150 ttgatagaccaaatgacaaagttattataaactcacacata 190  Q
    ||||||||| |||||||||| | ||||||||||||||||||    
T  44225314 ttgatagacgaaatgacaaaatcattataaactcacacata 44225274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 64408 - 64372
Alignment:
Q  152 gatagaccaaatgacaaagttattataaactcacaca 188  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  64408 gatagacgaaatgacaaagtcattataaactcacaca 64372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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