View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21553_low_56 (Length: 340)
Name: NF21553_low_56
Description: NF21553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21553_low_56 |
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Alignment Details
Target: chr2 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 9 - 323
Target Start/End: Original strand, 44690001 - 44690315
Alignment:
| Q |
9 |
gagaagaatgctgatcgagctgaagtctattttgatagagctattcaaagtgatccaaatgattggtaagataaatcttaaatctatgtggattatgtct |
108 |
Q |
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| T |
44690001 |
gagaagaatgctgatcgagctgaagcctattttgatagagctattcaaagtgatccaaatgattggtaagataaatcttaaatctatgtggattatgtct |
44690100 |
T |
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| Q |
109 |
tttcctctatgcatatacattctcctaatttttgcatgaaatttattgtttgaacatcaaactagagacattatatatgtgacatggtagatgtttatat |
208 |
Q |
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| T |
44690101 |
tttcctctatgtatatacattctcctaatttttgcatgaaatttattgtttgaacatcaaactagagacattatatatgtgacatggtagatgtttatat |
44690200 |
T |
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| Q |
209 |
atannnnnnnnnnnnnnnnnatcttctataatttacacatttcaataatgcaaatataaaccaaatgatacaggggatgaagatcttgatgtttaaaagt |
308 |
Q |
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| T |
44690201 |
atatttttcttttgctttttatcttctataatttacacatttcaataatgcaaatataaaccaaatgatacaggggatgaagatcttgatgtttaaaagt |
44690300 |
T |
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| Q |
309 |
catttatctatatag |
323 |
Q |
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||||||||||||||| |
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| T |
44690301 |
catttatctatatag |
44690315 |
T |
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