View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21554_low_19 (Length: 220)
Name: NF21554_low_19
Description: NF21554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21554_low_19 |
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Alignment Details
Target: chr8 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 8891665 - 8891868
Alignment:
| Q |
1 |
tcacatcataccatcctcatcttagctagaaaaatactactatcaataaataactatactactatcaacaaataactcaaaaagacagctaaatatagaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
8891665 |
tcacatcataccatcctcatcttagctagaaaaataatactatcaataaataactatactactatcaacaaataactcaaaaagatagctaaatatagaa |
8891764 |
T |
|
| Q |
101 |
cgcaaatgacccccttctgatcaaagatcatttcaaaaagaagtattttcaccattcctcactctacgtaccacaacttcctcaaactatcctacttcac |
200 |
Q |
| |
|
||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
8891765 |
cgcaaataacccccttctaatcaaagatcattccaaaaagaagtattttcaccattcctcactctacataccacaacttcctcaaactatcctacttcac |
8891864 |
T |
|
| Q |
201 |
ccac |
204 |
Q |
| |
|
|||| |
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|
| T |
8891865 |
ccac |
8891868 |
T |
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