View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21555_high_2 (Length: 287)
Name: NF21555_high_2
Description: NF21555
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21555_high_2 |
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Alignment Details
Target: chr6 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 14 - 271
Target Start/End: Original strand, 33441287 - 33441547
Alignment:
| Q |
14 |
gagtaggagtctaggagtgaaatgattatggatagcactctgcaaagccgttagatctaagagagggataaattgaaaattttctcttatatcaaacgac |
113 |
Q |
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| T |
33441287 |
gagtaggagtctaggagtgaaatgattatggatagcactctgcaaagccgttagatctaagagagggataaattgagaattttctcttagatcaaacgac |
33441386 |
T |
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| Q |
114 |
tctgcattgtgctacacggt---accattggagatgatccaaatatcttaagcacgtagtgttcaatcagttcaaaaacactgacaaatagtgtttggta |
210 |
Q |
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| T |
33441387 |
tctgcattgtgctacacggtacaaccattggagatgatccaaatatcttaagcatgtagtgttcaatcagttcaggcgcaccgacaaatagtgtttggta |
33441486 |
T |
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| Q |
211 |
gtattttgagaaattactcaaaaaatttacttagttttgggttacatatgtatatttttgg |
271 |
Q |
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| T |
33441487 |
gtattttgagaaattactcaaaacttttacttagttttgggttacatatgtatatttttgg |
33441547 |
T |
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