View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21557_low_19 (Length: 295)
Name: NF21557_low_19
Description: NF21557
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21557_low_19 |
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Alignment Details
Target: chr4 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 15 - 277
Target Start/End: Original strand, 26845622 - 26845884
Alignment:
| Q |
15 |
atcacagagagtgtgaaagctttcactataaataaacagagcaataaccctcagaaccaacttgctcactccctctttactcatagaaagagaatcacac |
114 |
Q |
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| T |
26845622 |
atcacagagagtgtgaaagctttcactataaataaacagagcaataaccctcagaaccaacttgctcactccctctttactcatagaaagagaatcacac |
26845721 |
T |
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| Q |
115 |
atggagagagtcagaaaataaataggtcttgtaatggcactcatccaaatttttctgaaagtcagataacacactaaatactcatctctgaccaaatctt |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26845722 |
atggagagagtcagaaaataaataggtcttgtaatggcactcatccaaatttttctgaaagtcagataacacactaaatactcatctctgaccaaatctt |
26845821 |
T |
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| Q |
215 |
agctgttctctctgatccatgatgcaaaatctcacaccaaacgcccataattcatcagatccc |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26845822 |
agctgttctctctgatccatgatgcaaaatctcacaccaaacgcccataattcatcagatccc |
26845884 |
T |
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