View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21559_low_5 (Length: 440)

Name: NF21559_low_5
Description: NF21559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21559_low_5
NF21559_low_5
[»] scaffold0044 (3 HSPs)
scaffold0044 (241-440)||(4876-5076)
scaffold0044 (1-178)||(4669-4845)
scaffold0044 (65-175)||(41237-41348)
[»] chr2 (53 HSPs)
chr2 (87-238)||(27845521-27845672)
chr2 (163-239)||(21238247-21238323)
chr2 (163-239)||(21240797-21240873)
chr2 (163-240)||(31756822-31756899)
chr2 (90-175)||(18546143-18546228)
chr2 (163-240)||(24505604-24505681)
chr2 (163-240)||(44621832-44621909)
chr2 (72-238)||(25109739-25109904)
chr2 (68-238)||(23005617-23005786)
chr2 (163-240)||(41683900-41683977)
chr2 (93-193)||(26393292-26393392)
chr2 (163-235)||(31504501-31504573)
chr2 (163-235)||(31507067-31507139)
chr2 (163-240)||(12627050-12627127)
chr2 (87-175)||(39827195-39827283)
chr2 (87-174)||(34137828-34137915)
chr2 (120-193)||(22458671-22458745)
chr2 (87-175)||(43946518-43946606)
chr2 (108-177)||(19672753-19672822)
chr2 (87-175)||(24682190-24682278)
chr2 (108-238)||(23792179-23792310)
chr2 (87-177)||(22106219-22106309)
chr2 (109-238)||(24941586-24941714)
chr2 (94-175)||(7187395-7187476)
chr2 (124-238)||(20519258-20519373)
chr2 (119-175)||(23079874-23079930)
chr2 (87-175)||(23932214-23932302)
chr2 (87-175)||(32214250-32214338)
chr2 (87-174)||(6726801-6726888)
chr2 (87-178)||(24918894-24918985)
chr2 (94-175)||(22172979-22173060)
chr2 (170-238)||(24688390-24688459)
chr2 (65-175)||(18809780-18809891)
chr2 (81-176)||(22695188-22695284)
chr2 (65-175)||(23711227-23711338)
chr2 (65-175)||(32038711-32038822)
chr2 (82-177)||(34401734-34401830)
chr2 (109-177)||(43138262-43138330)
chr2 (87-175)||(45027220-45027308)
chr2 (82-175)||(23131716-23131810)
chr2 (82-175)||(23134183-23134277)
chr2 (124-226)||(23208218-23208318)
chr2 (65-173)||(24897411-24897520)
chr2 (65-173)||(24899894-24900003)
chr2 (65-173)||(24902371-24902480)
chr2 (65-173)||(24904848-24904957)
chr2 (65-173)||(24907323-24907432)
chr2 (90-175)||(23706346-23706431)
chr2 (65-175)||(26506216-26506327)
chr2 (65-175)||(27919978-27920089)
chr2 (65-175)||(28577942-28578053)
chr2 (126-178)||(37380508-37380560)
chr2 (65-175)||(39683153-39683264)
[»] scaffold0422 (1 HSPs)
scaffold0422 (148-240)||(3985-4077)
[»] scaffold0123 (1 HSPs)
scaffold0123 (68-238)||(25945-26113)
[»] chr7 (67 HSPs)
chr7 (163-240)||(35367129-35367206)
chr7 (163-240)||(21064351-21064428)
chr7 (163-240)||(123330-123407)
chr7 (163-240)||(13732675-13732752)
chr7 (163-240)||(16929194-16929271)
chr7 (163-240)||(48786218-48786295)
chr7 (163-240)||(16007322-16007399)
chr7 (87-176)||(42462835-42462924)
chr7 (87-175)||(16997056-16997144)
chr7 (65-175)||(11768090-11768197)
chr7 (68-233)||(15117335-15117500)
chr7 (94-175)||(37793392-37793473)
chr7 (87-175)||(9176835-9176922)
chr7 (92-184)||(38519652-38519744)
chr7 (68-175)||(14037064-14037169)
chr7 (68-175)||(14347094-14347199)
chr7 (120-234)||(15113858-15113975)
chr7 (68-189)||(16324817-16324936)
chr7 (87-177)||(16496258-16496347)
chr7 (87-176)||(129942-130030)
chr7 (109-238)||(3387452-3387579)
chr7 (68-175)||(14045636-14045741)
chr7 (68-175)||(14355666-14355771)
chr7 (111-193)||(17016578-17016661)
chr7 (111-238)||(17052696-17052826)
chr7 (65-175)||(27217699-27217809)
chr7 (87-177)||(5294430-5294520)
chr7 (93-175)||(11524799-11524881)
chr7 (94-175)||(18455590-18455671)
chr7 (87-175)||(8941228-8941316)
chr7 (109-177)||(10062881-10062949)
chr7 (65-175)||(13870183-13870294)
chr7 (87-174)||(11973109-11973196)
chr7 (140-238)||(15440214-15440311)
chr7 (65-175)||(26355194-26355304)
chr7 (65-175)||(26357646-26357756)
chr7 (87-177)||(5295603-5295693)
chr7 (87-177)||(5296776-5296866)
chr7 (98-219)||(15007606-15007726)
chr7 (65-161)||(9032530-9032623)
chr7 (73-178)||(14156389-14156493)
chr7 (65-175)||(457160-457271)
chr7 (87-175)||(8469296-8469384)
chr7 (87-175)||(9945010-9945098)
chr7 (87-175)||(14269084-14269172)
chr7 (65-175)||(15375927-15376038)
chr7 (65-175)||(20384337-20384448)
chr7 (87-175)||(23461633-23461721)
chr7 (126-178)||(42374302-42374354)
chr7 (126-177)||(1856399-1856450)
chr7 (65-175)||(11392516-11392625)
chr7 (126-177)||(13648284-13648335)
chr7 (126-177)||(13917571-13917622)
chr7 (140-238)||(47832692-47832790)
chr7 (69-175)||(14317516-14317621)
chr7 (126-176)||(19485972-19486022)
chr7 (109-175)||(48274487-48274553)
chr7 (163-196)||(13394646-13394679)
chr7 (87-175)||(16410919-16411008)
chr7 (163-196)||(17504937-17504970)
chr7 (163-196)||(17548244-17548277)
chr7 (65-204)||(41523757-41523896)
chr7 (147-238)||(9388856-9388946)
chr7 (126-178)||(10500732-10500784)
chr7 (126-178)||(13893449-13893501)
chr7 (126-174)||(25926301-25926349)
chr7 (87-175)||(45846765-45846853)
[»] chr1 (54 HSPs)
chr1 (87-238)||(21683860-21684012)
chr1 (163-240)||(20580369-20580446)
chr1 (163-240)||(14431492-14431569)
chr1 (163-240)||(20632221-20632298)
chr1 (163-240)||(22899393-22899470)
chr1 (163-240)||(36182480-36182557)
chr1 (163-240)||(37359373-37359450)
chr1 (163-240)||(45495294-45495371)
chr1 (83-184)||(21042496-21042597)
chr1 (163-240)||(24088320-24088397)
chr1 (87-175)||(47191465-47191553)
chr1 (68-238)||(50687457-50687626)
chr1 (87-176)||(22125162-22125251)
chr1 (87-193)||(15859300-15859403)
chr1 (68-177)||(27652390-27652497)
chr1 (87-175)||(21342956-21343043)
chr1 (87-175)||(21347821-21347908)
chr1 (92-175)||(20958998-20959081)
chr1 (87-177)||(14294726-14294815)
chr1 (87-177)||(51131421-51131510)
chr1 (90-175)||(52940027-52940112)
chr1 (102-193)||(22777340-22777431)
chr1 (124-226)||(26065861-26065963)
chr1 (89-175)||(16382001-16382087)
chr1 (69-175)||(48521359-48521463)
chr1 (138-238)||(41049110-41049209)
chr1 (3-63)||(35568991-35569051)
chr1 (68-234)||(12272435-12272601)
chr1 (125-230)||(50613183-50613289)
chr1 (125-230)||(50621011-50621117)
chr1 (94-175)||(13880538-13880619)
chr1 (81-193)||(20453619-20453731)
chr1 (65-175)||(14237655-14237766)
chr1 (87-175)||(46560042-46560130)
chr1 (65-175)||(51083115-51083226)
chr1 (87-178)||(22050347-22050438)
chr1 (126-193)||(22130009-22130075)
chr1 (87-237)||(40390158-40390306)
chr1 (81-177)||(41373327-41373424)
chr1 (65-175)||(13989703-13989814)
chr1 (82-177)||(48444349-48444445)
chr1 (87-193)||(13212175-13212280)
chr1 (87-174)||(22122168-22122255)
chr1 (87-178)||(29298995-29299086)
chr1 (87-174)||(41230941-41231028)
chr1 (120-175)||(43629297-43629352)
chr1 (82-175)||(16362774-16362868)
chr1 (65-177)||(23592942-23593055)
chr1 (128-177)||(45574018-45574067)
chr1 (87-175)||(9044518-9044606)
chr1 (87-175)||(16274573-16274661)
chr1 (65-175)||(21474298-21474409)
chr1 (65-175)||(21922503-21922614)
chr1 (147-238)||(49262015-49262105)
[»] scaffold0022 (2 HSPs)
scaffold0022 (87-235)||(128038-128185)
scaffold0022 (124-226)||(81191-81291)
[»] scaffold0586 (1 HSPs)
scaffold0586 (163-240)||(4799-4876)
[»] chr8 (66 HSPs)
chr8 (163-240)||(21414366-21414443)
chr8 (163-240)||(7300202-7300279)
chr8 (163-240)||(17615821-17615898)
chr8 (69-238)||(24353912-24354079)
chr8 (163-240)||(24706947-24707024)
chr8 (163-240)||(22144524-22144601)
chr8 (163-240)||(44432972-44433049)
chr8 (163-240)||(10834043-10834120)
chr8 (87-184)||(22245228-22245325)
chr8 (87-184)||(22252306-22252403)
chr8 (68-238)||(17438602-17438770)
chr8 (65-193)||(22526353-22526478)
chr8 (65-238)||(16800303-16800473)
chr8 (87-238)||(19936178-19936326)
chr8 (163-235)||(6607402-6607474)
chr8 (99-238)||(22365531-22365670)
chr8 (87-175)||(28398452-28398540)
chr8 (87-175)||(20501230-20501318)
chr8 (111-238)||(22996699-22996827)
chr8 (91-168)||(17085077-17085154)
chr8 (91-168)||(17085311-17085388)
chr8 (82-238)||(17266080-17266235)
chr8 (94-175)||(22184011-22184092)
chr8 (65-238)||(22984508-22984678)
chr8 (87-178)||(24049364-24049455)
chr8 (87-193)||(40492009-40492115)
chr8 (108-194)||(13507213-13507299)
chr8 (108-194)||(13596745-13596831)
chr8 (87-175)||(19154012-19154100)
chr8 (68-175)||(14102352-14102456)
chr8 (87-174)||(20404033-20404120)
chr8 (94-177)||(23661266-23661349)
chr8 (109-204)||(26222303-26222397)
chr8 (109-238)||(26220556-26220684)
chr8 (87-177)||(32810448-32810538)
chr8 (65-193)||(45289744-45289872)
chr8 (94-175)||(2418003-2418082)
chr8 (87-175)||(1326445-1326533)
chr8 (87-175)||(16412635-16412723)
chr8 (111-175)||(17460208-17460272)
chr8 (87-175)||(19897268-19897356)
chr8 (87-178)||(20457432-20457523)
chr8 (87-178)||(27471734-27471825)
chr8 (87-178)||(32122482-32122573)
chr8 (157-238)||(19807328-19807412)
chr8 (65-175)||(1485239-1485350)
chr8 (65-175)||(4484117-4484228)
chr8 (87-175)||(11361271-11361359)
chr8 (126-194)||(14396892-14396960)
chr8 (65-175)||(14408658-14408769)
chr8 (65-175)||(14824613-14824724)
chr8 (65-175)||(20045409-20045520)
chr8 (126-178)||(21999435-21999487)
chr8 (87-178)||(15202303-15202394)
chr8 (111-174)||(22418588-22418651)
chr8 (87-177)||(22966818-22966908)
chr8 (87-178)||(37609719-37609810)
chr8 (87-175)||(21697416-21697504)
chr8 (126-175)||(21966701-21966750)
chr8 (65-175)||(18677276-18677387)
chr8 (111-175)||(20532536-20532600)
chr8 (126-178)||(21979464-21979516)
chr8 (126-178)||(21982949-21983001)
chr8 (126-178)||(22005074-22005126)
chr8 (87-175)||(38549133-38549221)
chr8 (126-178)||(44522176-44522228)
[»] chr4 (44 HSPs)
chr4 (163-240)||(41792575-41792652)
chr4 (163-240)||(287995-288072)
chr4 (163-240)||(1101700-1101777)
chr4 (163-240)||(13043704-13043781)
chr4 (163-240)||(15279235-15279312)
chr4 (163-240)||(47125963-47126040)
chr4 (87-175)||(15792658-15792746)
chr4 (163-236)||(55501890-55501963)
chr4 (163-229)||(14699618-14699684)
chr4 (65-238)||(26790200-26790368)
chr4 (108-194)||(53081284-53081370)
chr4 (87-176)||(26049619-26049708)
chr4 (163-240)||(27028786-27028863)
chr4 (87-175)||(14852024-14852112)
chr4 (87-175)||(32306152-32306240)
chr4 (65-175)||(12841508-12841616)
chr4 (94-175)||(14825984-14826062)
chr4 (87-177)||(363127-363217)
chr4 (81-175)||(19617395-19617489)
chr4 (94-175)||(12611880-12611961)
chr4 (94-175)||(23802406-23802487)
chr4 (87-175)||(15489469-15489557)
chr4 (111-175)||(17334185-17334249)
chr4 (65-175)||(12032985-12033096)
chr4 (87-174)||(52313508-52313595)
chr4 (109-175)||(54797886-54797952)
chr4 (109-226)||(14281254-14281369)
chr4 (90-178)||(3515764-3515852)
chr4 (65-175)||(15117566-15117677)
chr4 (94-174)||(51463031-51463111)
chr4 (87-175)||(52872402-52872490)
chr4 (65-175)||(1836734-1836843)
chr4 (65-175)||(7640400-7640511)
chr4 (65-176)||(14651567-14651677)
chr4 (89-184)||(16043924-16044019)
chr4 (87-177)||(19243562-19243653)
chr4 (65-175)||(29268193-29268304)
chr4 (93-238)||(3838092-3838235)
chr4 (126-196)||(22354671-22354740)
chr4 (87-171)||(3485828-3485913)
chr4 (163-196)||(10314597-10314630)
chr4 (87-175)||(15354846-15354935)
chr4 (153-202)||(39705461-39705509)
chr4 (87-175)||(18214524-18214612)
[»] scaffold0106 (1 HSPs)
scaffold0106 (87-171)||(18857-18941)
[»] scaffold0023 (2 HSPs)
scaffold0023 (163-238)||(163374-163449)
scaffold0023 (65-175)||(95248-95359)
[»] scaffold0004 (1 HSPs)
scaffold0004 (92-175)||(333206-333289)
[»] scaffold0525 (2 HSPs)
scaffold0525 (163-240)||(7544-7621)
scaffold0525 (163-240)||(10075-10152)
[»] scaffold0090 (1 HSPs)
scaffold0090 (93-230)||(2902-3038)
[»] scaffold0021 (1 HSPs)
scaffold0021 (163-240)||(133109-133186)
[»] scaffold0003 (1 HSPs)
scaffold0003 (163-240)||(253696-253773)
[»] chr6 (59 HSPs)
chr6 (163-240)||(8523835-8523912)
chr6 (163-240)||(16830701-16830778)
chr6 (163-240)||(22593185-22593262)
chr6 (163-240)||(29493658-29493735)
chr6 (89-175)||(23527300-23527386)
chr6 (65-175)||(18697374-18697482)
chr6 (87-184)||(17229055-17229152)
chr6 (65-175)||(18707125-18707233)
chr6 (87-238)||(18895419-18895571)
chr6 (93-175)||(22792430-22792512)
chr6 (87-238)||(19363330-19363480)
chr6 (87-177)||(18454091-18454181)
chr6 (87-175)||(23539794-23539882)
chr6 (93-176)||(20137544-20137627)
chr6 (93-176)||(22195242-22195325)
chr6 (65-171)||(13612322-13612427)
chr6 (87-175)||(19024260-19024347)
chr6 (87-175)||(23077587-23077675)
chr6 (87-175)||(23992983-23993071)
chr6 (111-238)||(33443950-33444081)
chr6 (87-175)||(35012025-35012113)
chr6 (94-175)||(14978543-14978624)
chr6 (109-226)||(19102413-19102528)
chr6 (106-175)||(20556034-20556103)
chr6 (94-175)||(25618900-25618981)
chr6 (87-175)||(17027864-17027952)
chr6 (140-235)||(18231684-18231780)
chr6 (87-175)||(25535969-25536057)
chr6 (87-175)||(25689387-25689475)
chr6 (87-175)||(25721059-25721147)
chr6 (87-175)||(25753402-25753490)
chr6 (87-175)||(25755572-25755660)
chr6 (87-175)||(34963934-34964022)
chr6 (109-204)||(3850968-3851062)
chr6 (65-175)||(8055868-8055978)
chr6 (65-175)||(12743157-12743268)
chr6 (65-175)||(17882710-17882820)
chr6 (87-178)||(31629858-31629949)
chr6 (109-175)||(16447754-16447820)
chr6 (1-63)||(29483557-29483618)
chr6 (82-147)||(18198611-18198675)
chr6 (109-174)||(21119807-21119872)
chr6 (87-175)||(16198359-16198447)
chr6 (126-178)||(17201077-17201129)
chr6 (65-175)||(18333806-18333917)
chr6 (65-175)||(22783065-22783176)
chr6 (65-175)||(24423384-24423495)
chr6 (87-175)||(30676039-30676127)
chr6 (65-175)||(33865115-33865226)
chr6 (87-174)||(1598995-1599082)
chr6 (81-175)||(18343044-18343139)
chr6 (126-177)||(23531894-23531945)
chr6 (126-175)||(8226740-8226789)
chr6 (163-196)||(15540182-15540215)
chr6 (14-63)||(15684643-15684692)
chr6 (163-196)||(15685284-15685317)
chr6 (87-175)||(18914879-18914966)
chr6 (126-178)||(25739324-25739376)
chr6 (65-175)||(26923659-26923770)
[»] chr5 (46 HSPs)
chr5 (163-240)||(4398612-4398689)
chr5 (163-240)||(16255075-16255152)
chr5 (163-240)||(16258708-16258785)
chr5 (163-240)||(22592427-22592504)
chr5 (163-240)||(22595982-22596059)
chr5 (163-240)||(22881090-22881167)
chr5 (163-240)||(29324360-29324437)
chr5 (163-239)||(26496788-26496864)
chr5 (163-240)||(22588872-22588949)
chr5 (98-238)||(22177282-22177423)
chr5 (163-240)||(26360244-26360322)
chr5 (65-142)||(25744603-25744679)
chr5 (93-193)||(26739779-26739879)
chr5 (91-176)||(23470660-23470745)
chr5 (65-238)||(20572706-20572876)
chr5 (113-238)||(21327360-21327485)
chr5 (92-176)||(23476373-23476457)
chr5 (87-171)||(25573581-25573665)
chr5 (87-170)||(25576010-25576093)
chr5 (65-175)||(14048931-14049040)
chr5 (87-177)||(36315409-36315498)
chr5 (67-177)||(41094816-41094925)
chr5 (93-170)||(26731989-26732066)
chr5 (87-175)||(15797305-15797393)
chr5 (87-170)||(25574817-25574900)
chr5 (98-193)||(27988086-27988181)
chr5 (94-175)||(22413056-22413137)
chr5 (87-175)||(2153952-2154040)
chr5 (87-175)||(29330727-29330815)
chr5 (81-175)||(40723460-40723555)
chr5 (109-175)||(18318184-18318250)
chr5 (82-175)||(23065370-23065464)
chr5 (87-176)||(41860580-41860669)
chr5 (87-175)||(17516290-17516378)
chr5 (87-175)||(24473828-24473916)
chr5 (87-174)||(20917168-20917255)
chr5 (81-175)||(39245989-39246084)
chr5 (109-175)||(20765230-20765296)
chr5 (126-196)||(40726683-40726752)
chr5 (163-196)||(23669265-23669298)
chr5 (163-196)||(23694360-23694393)
chr5 (65-177)||(31062187-31062295)
chr5 (126-178)||(18419454-18419506)
chr5 (65-175)||(29346818-29346929)
chr5 (65-175)||(29349291-29349402)
chr5 (65-175)||(29351764-29351875)
[»] chr3 (61 HSPs)
chr3 (163-240)||(2037628-2037705)
chr3 (163-240)||(2041369-2041446)
chr3 (163-240)||(10988747-10988824)
chr3 (163-240)||(14039082-14039159)
chr3 (163-240)||(14042550-14042627)
chr3 (163-240)||(39231629-39231706)
chr3 (68-193)||(43927952-43928076)
chr3 (163-240)||(54974288-54974365)
chr3 (163-240)||(54976898-54976975)
chr3 (163-240)||(54979508-54979585)
chr3 (163-240)||(2034121-2034198)
chr3 (163-240)||(602779-602856)
chr3 (163-239)||(7633269-7633345)
chr3 (87-175)||(9578509-9578597)
chr3 (68-175)||(325025-325130)
chr3 (68-175)||(12386275-12386381)
chr3 (93-175)||(15207805-15207887)
chr3 (81-177)||(19039459-19039554)
chr3 (111-238)||(13919756-13919886)
chr3 (89-176)||(32402181-32402268)
chr3 (163-237)||(15009299-15009373)
chr3 (67-177)||(44495482-44495590)
chr3 (99-194)||(23275541-23275635)
chr3 (93-151)||(15266050-15266108)
chr3 (87-177)||(17738145-17738234)
chr3 (111-175)||(11202209-11202273)
chr3 (87-171)||(28195495-28195578)
chr3 (68-175)||(21838320-21838425)
chr3 (126-184)||(13522193-13522251)
chr3 (87-176)||(12119184-12119273)
chr3 (87-175)||(10557692-10557779)
chr3 (87-175)||(24514237-24514325)
chr3 (93-196)||(605502-605603)
chr3 (87-174)||(13937295-13937382)
chr3 (124-226)||(37250268-37250369)
chr3 (87-174)||(41124693-41124780)
chr3 (120-175)||(45219412-45219467)
chr3 (109-175)||(21619386-21619452)
chr3 (106-175)||(24152386-24152455)
chr3 (109-237)||(36167535-36167662)
chr3 (65-175)||(17464015-17464126)
chr3 (87-175)||(20629512-20629600)
chr3 (65-175)||(34160163-34160274)
chr3 (121-193)||(53300808-53300879)
chr3 (87-175)||(55318624-55318712)
chr3 (81-175)||(6468348-6468443)
chr3 (65-175)||(13151002-13151113)
chr3 (65-175)||(13153470-13153581)
chr3 (87-174)||(17444084-17444171)
chr3 (156-229)||(17684779-17684854)
chr3 (126-177)||(22146766-22146817)
chr3 (126-196)||(5224325-5224394)
chr3 (82-175)||(10246936-10247030)
chr3 (126-176)||(37641503-37641553)
chr3 (94-175)||(50243782-50243863)
chr3 (87-175)||(10379893-10379981)
chr3 (65-175)||(15978372-15978483)
chr3 (126-178)||(16828278-16828330)
chr3 (125-193)||(22109464-22109531)
chr3 (139-230)||(23317881-23317973)
chr3 (65-175)||(55477329-55477440)
[»] scaffold0046 (2 HSPs)
scaffold0046 (73-175)||(16085-16186)
scaffold0046 (73-175)||(25272-25373)
[»] scaffold0395 (1 HSPs)
scaffold0395 (163-240)||(7680-7757)
[»] scaffold0131 (1 HSPs)
scaffold0131 (163-240)||(2620-2696)
[»] scaffold0001 (5 HSPs)
scaffold0001 (87-175)||(447377-447465)
scaffold0001 (87-175)||(498287-498375)
scaffold0001 (68-174)||(84457-84560)
scaffold0001 (87-178)||(501818-501909)
scaffold0001 (126-178)||(152108-152160)
[»] scaffold0357 (3 HSPs)
scaffold0357 (68-175)||(4811-4917)
scaffold0357 (147-196)||(14096-14144)
scaffold0357 (98-226)||(15279-15405)
[»] scaffold1419 (1 HSPs)
scaffold1419 (89-175)||(923-1008)
[»] scaffold0169 (1 HSPs)
scaffold0169 (93-175)||(28696-28778)
[»] scaffold0750 (1 HSPs)
scaffold0750 (93-238)||(4507-4655)
[»] scaffold0009 (2 HSPs)
scaffold0009 (87-176)||(191797-191886)
scaffold0009 (68-238)||(86406-86576)
[»] scaffold1835 (1 HSPs)
scaffold1835 (87-175)||(171-259)
[»] scaffold0359 (1 HSPs)
scaffold0359 (65-177)||(16276-16387)
[»] scaffold0138 (1 HSPs)
scaffold0138 (93-235)||(17304-17446)
[»] scaffold0058 (1 HSPs)
scaffold0058 (163-235)||(47548-47620)
[»] scaffold1403 (1 HSPs)
scaffold1403 (94-193)||(1411-1508)
[»] scaffold0686 (1 HSPs)
scaffold0686 (68-175)||(2126-2232)
[»] scaffold0010 (3 HSPs)
scaffold0010 (98-237)||(59823-59963)
scaffold0010 (88-174)||(7174-7260)
scaffold0010 (94-176)||(1528-1610)
[»] scaffold0914 (1 HSPs)
scaffold0914 (93-175)||(2614-2696)
[»] scaffold0420 (1 HSPs)
scaffold0420 (82-235)||(5399-5552)
[»] scaffold0180 (2 HSPs)
scaffold0180 (68-175)||(33669-33775)
scaffold0180 (98-175)||(31370-31447)
[»] scaffold0072 (2 HSPs)
scaffold0072 (68-238)||(62265-62435)
scaffold0072 (87-175)||(58700-58785)
[»] scaffold0107 (1 HSPs)
scaffold0107 (94-175)||(13552-13633)
[»] scaffold0014 (1 HSPs)
scaffold0014 (67-175)||(203540-203647)
[»] scaffold0012 (1 HSPs)
scaffold0012 (87-175)||(220334-220420)
[»] scaffold0077 (1 HSPs)
scaffold0077 (87-175)||(54812-54900)
[»] scaffold0139 (1 HSPs)
scaffold0139 (93-238)||(39208-39358)
[»] scaffold0011 (1 HSPs)
scaffold0011 (65-175)||(37283-37390)
[»] scaffold0006 (2 HSPs)
scaffold0006 (68-175)||(97893-97999)
scaffold0006 (68-175)||(107171-107277)
[»] scaffold0184 (1 HSPs)
scaffold0184 (87-177)||(245-334)
[»] scaffold0040 (4 HSPs)
scaffold0040 (65-170)||(14205-14307)
scaffold0040 (82-184)||(23077-23177)
scaffold0040 (87-175)||(20598-20686)
scaffold0040 (82-177)||(13031-13127)
[»] scaffold0394 (1 HSPs)
scaffold0394 (94-175)||(13019-13100)
[»] scaffold0282 (1 HSPs)
scaffold0282 (87-184)||(17326-17423)
[»] scaffold0114 (1 HSPs)
scaffold0114 (108-177)||(46240-46309)
[»] scaffold0574 (1 HSPs)
scaffold0574 (87-178)||(7205-7296)
[»] scaffold0347 (1 HSPs)
scaffold0347 (92-175)||(9771-9853)
[»] scaffold0047 (1 HSPs)
scaffold0047 (94-175)||(22794-22872)
[»] scaffold0005 (3 HSPs)
scaffold0005 (94-175)||(13647-13725)
scaffold0005 (98-175)||(268545-268621)
scaffold0005 (65-176)||(165615-165725)
[»] scaffold0439 (1 HSPs)
scaffold0439 (126-184)||(12397-12455)
[»] scaffold0290 (1 HSPs)
scaffold0290 (93-175)||(1042-1124)
[»] scaffold0125 (1 HSPs)
scaffold0125 (93-175)||(1051-1133)
[»] scaffold0108 (1 HSPs)
scaffold0108 (86-184)||(3993-4091)
[»] scaffold0057 (1 HSPs)
scaffold0057 (93-175)||(72399-72481)
[»] scaffold0054 (1 HSPs)
scaffold0054 (93-175)||(75025-75107)
[»] scaffold0008 (1 HSPs)
scaffold0008 (109-238)||(72564-72692)
[»] scaffold0737 (1 HSPs)
scaffold0737 (138-238)||(864-963)
[»] scaffold0601 (1 HSPs)
scaffold0601 (94-175)||(7547-7627)
[»] scaffold0130 (1 HSPs)
scaffold0130 (73-177)||(903-1007)
[»] scaffold0083 (1 HSPs)
scaffold0083 (106-175)||(42278-42347)
[»] scaffold0076 (1 HSPs)
scaffold0076 (68-177)||(22497-22604)
[»] scaffold0711 (1 HSPs)
scaffold0711 (87-175)||(6897-6985)
[»] scaffold0480 (1 HSPs)
scaffold0480 (65-184)||(10278-10396)
[»] scaffold0322 (1 HSPs)
scaffold0322 (87-175)||(18691-18779)
[»] scaffold0254 (2 HSPs)
scaffold0254 (81-204)||(19126-19249)
scaffold0254 (87-177)||(21610-21701)
[»] scaffold0149 (1 HSPs)
scaffold0149 (87-175)||(34250-34338)
[»] scaffold0074 (1 HSPs)
scaffold0074 (65-184)||(9049-9168)
[»] scaffold0035 (2 HSPs)
scaffold0035 (87-175)||(107229-107317)
scaffold0035 (88-175)||(115731-115818)
[»] scaffold0546 (1 HSPs)
scaffold0546 (65-171)||(7874-7981)
[»] scaffold0230 (3 HSPs)
scaffold0230 (65-175)||(14787-14898)
scaffold0230 (87-175)||(22700-22788)
scaffold0230 (87-172)||(20527-20612)
[»] scaffold0109 (1 HSPs)
scaffold0109 (65-171)||(5326-5433)
[»] scaffold0037 (1 HSPs)
scaffold0037 (94-177)||(82967-83050)
[»] scaffold0016 (2 HSPs)
scaffold0016 (87-174)||(185023-185110)
scaffold0016 (126-178)||(172106-172158)
[»] scaffold0112 (1 HSPs)
scaffold0112 (93-175)||(23124-23206)
[»] scaffold1792 (1 HSPs)
scaffold1792 (87-175)||(1112-1200)
[»] scaffold0877 (1 HSPs)
scaffold0877 (111-175)||(2028-2092)
[»] scaffold0716 (1 HSPs)
scaffold0716 (87-175)||(5448-5536)
[»] scaffold0535 (1 HSPs)
scaffold0535 (87-175)||(7538-7626)
[»] scaffold0457 (1 HSPs)
scaffold0457 (126-178)||(10895-10947)
[»] scaffold0417 (1 HSPs)
scaffold0417 (87-175)||(493-581)
[»] scaffold0301 (2 HSPs)
scaffold0301 (126-178)||(11319-11371)
scaffold0301 (126-178)||(15719-15771)
[»] scaffold0191 (1 HSPs)
scaffold0191 (87-175)||(3574-3662)
[»] scaffold0145 (1 HSPs)
scaffold0145 (111-175)||(10725-10789)
[»] scaffold0134 (1 HSPs)
scaffold0134 (65-175)||(38659-38770)
[»] scaffold0019 (2 HSPs)
scaffold0019 (65-175)||(158622-158733)
scaffold0019 (87-175)||(21926-22014)
[»] scaffold1439 (1 HSPs)
scaffold1439 (94-177)||(1045-1128)
[»] scaffold0708 (1 HSPs)
scaffold0708 (111-238)||(1540-1670)
[»] scaffold0500 (1 HSPs)
scaffold0500 (65-176)||(8338-8448)
[»] scaffold0297 (1 HSPs)
scaffold0297 (65-175)||(2918-3027)
[»] scaffold0117 (1 HSPs)
scaffold0117 (126-236)||(42674-42785)
[»] scaffold0042 (1 HSPs)
scaffold0042 (87-174)||(43169-43256)
[»] scaffold0494 (1 HSPs)
scaffold0494 (73-175)||(36-137)
[»] scaffold0695 (1 HSPs)
scaffold0695 (87-175)||(6804-6893)
[»] scaffold0413 (1 HSPs)
scaffold0413 (73-177)||(13462-13566)
[»] scaffold0200 (1 HSPs)
scaffold0200 (126-175)||(18596-18645)
[»] scaffold0146 (1 HSPs)
scaffold0146 (65-175)||(22926-23038)
[»] scaffold0075 (1 HSPs)
scaffold0075 (147-226)||(7457-7534)
[»] scaffold0015 (1 HSPs)
scaffold0015 (126-175)||(209863-209912)
[»] scaffold1296 (1 HSPs)
scaffold1296 (87-175)||(2008-2096)
[»] scaffold0747 (1 HSPs)
scaffold0747 (87-175)||(1462-1550)
[»] scaffold0598 (1 HSPs)
scaffold0598 (134-226)||(216-307)
[»] scaffold0453 (1 HSPs)
scaffold0453 (157-197)||(6992-7032)
[»] scaffold0043 (1 HSPs)
scaffold0043 (87-175)||(10738-10826)
[»] scaffold0031 (1 HSPs)
scaffold0031 (65-175)||(56220-56331)
[»] scaffold0028 (5 HSPs)
scaffold0028 (65-175)||(135050-135161)
scaffold0028 (65-175)||(137519-137630)
scaffold0028 (65-175)||(139988-140099)
scaffold0028 (65-175)||(142457-142568)
scaffold0028 (65-175)||(144926-145037)
[»] scaffold0007 (1 HSPs)
scaffold0007 (65-177)||(160276-160386)


Alignment Details
Target: scaffold0044 (Bit Score: 157; Significance: 3e-83; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 241 - 440
Target Start/End: Original strand, 4876 - 5076
Alignment:
Q  241 ctatgttaatgggttataaattcatacgtttcttgtagtttattttgatgaacccttatttgaattcgaagcttcatattctttcc-atgaatccgtcga 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||| | | |||||||||||    
T  4876 ctatgttaatgggttataaattcatacgtttcttgtagtttattttgatgaacccttatttgaattcggagcttcatgtttttttcgaagaatccgtcga 4975  T
Q  340 tcaaagttctttttatttttaatgttatcatgttttgatacctgagtgtttttgttctcaacaactttagaccaccggtgctttagattccaattgatta 439  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4976 tcaaagttctttttatttttaatgttatcctgttttgatacatgaatgtttttgttctcaacaactttagaccaccggtgctttagattccaattggtta 5075  T
Q  440 c 440  Q
    |    
T  5076 c 5076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 4845 - 4669
Alignment:
Q  1 aacaattaatcacaagctagaacaagaagaaaaatgattatgagaataagtatctaaccccctaacttttaacctaattccccaatttctcaaaaactaa 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4845 aacaattaatcacaagctagaacaagaagaaaa-tgattatgagaataagtatctaaccccctaacttttaacctaattccccaatttttcaaaaactaa 4747  T
Q  101 tcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  4746 tcctagaacttgttaaagttaatcatcagaattatagacttaagaaaattggatgctaatcccacccttaccttagat 4669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 41237 - 41348
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 163  Q
    ||||||||||| | | ||||| ||||||||||| ||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||    
T  41237 acttttaaccttaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtccc 41336  T
Q  164 acccttacctta 175  Q
    ||||||||||||    
T  41337 acccttacctta 41348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 4e-45; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 27845521 - 27845672
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaa 186  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||| | ||||||||    
T  27845521 ttctcaaaaactaatcctacaacttgttaaatctaatcatcagaattatagacttaagaaaattgaatgttagtctcacccttacctta-acaatcgaaa 27845619  T
Q  187 tc-gcagcccttctaggtcctcttcccttttcttgacttttctcctttttctc 238  Q
    || ||||||  ||| ||| |||||| ||||||||||||||||||| |||||||    
T  27845620 tcggcagcctctcttggttctcttctcttttcttgacttttctcccttttctc 27845672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 21238323 - 21238247
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctct 239  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21238323 cacccttaccttaggtaatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctct 21238247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 21240873 - 21240797
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctct 239  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21240873 cacccttaccttaggtaatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctct 21240797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 31756822 - 31756899
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  31756822 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 31756899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 18546228 - 18546143
Alignment:
Q  90 tcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| | | ||||| |||||||||||||    
T  18546228 tcaaaaactaatcctacaacttgctaaatctaatcatcagaattatagacttaagaaaattgaacgttagtctcacccttacctta 18546143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 24505604 - 24505681
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||| ||||||||||    
T  24505604 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgactcttctcttttttctctg 24505681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 44621832 - 44621909
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    |||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  44621832 cacccttaccttagataatcgaaaacgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 44621909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 72 - 238
Target Start/End: Original strand, 25109739 - 25109904
Alignment:
Q  72 acctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttac 171  Q
    ||||||||| |||||| ||| ||||||||| ||||| |||||||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||||||    
T  25109739 acctaattctccaatt-ctctaaaactaattctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttac 25109836  T
Q  172 cttagataa-tcgaaatcgcagcc-cttctaggtcctcttcccttttcttgacttttctcctttttctc 238  Q
    |||| |||| | |||||||||||| || ||  ||||||||| ||| ||||||||||||||| |||||||    
T  25109837 ctta-ataatttgaaatcgcagcctctactttgtcctcttctcttctcttgacttttctcccttttctc 25109904  T

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Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 238
Target Start/End: Original strand, 23005617 - 23005786
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| | |||| ||| ||||||||||||||| ||| |||||  ||||||||| ||||| |||||||| | ||||| ||||||||| |||||    
T  23005617 tttaacctaattctcaaatt-ctctaaaactaatcctaca-cttcttaaatttaatcatcaaaattacagacttaatagaattgaatgctagtctcaccc 23005714  T
Q  168 ttaccttagataatcgaaatcgcagcc-cttctaggtcctcttcccttttcttgacttttctcctttttctc 238  Q
    |||||||||| |||||||||||||||| ||| | ||| ||  || ||| ||||||||||||| | |||||||    
T  23005715 ttaccttagaaaatcgaaatcgcagcctcttgttggttcttctctcttctcttgacttttctgccttttctc 23005786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 41683977 - 41683900
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    |||||||||||||||||||| |||||||||||||||| | | |||||||||||||||||||||||||| |||||||||    
T  41683977 cacccttaccttagataatcaaaatcgcagcccttcttgattctcttcccttttcttgacttttctcccttttctctg 41683900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 93 - 193
Target Start/End: Original strand, 26393292 - 26393392
Alignment:
Q  93 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcag 192  Q
    |||||||| ||||||||||||||||  ||||||||||||||| |||||||||| ||||| ||| ||||| |||||||||||||   ||||||||||||||    
T  26393292 aaaactaaacctacaacttgttaaatttaatcatcagaattacagacttaagagaattgaatgttagtctcacccttaccttaacaaatcgaaatcgcag 26393391  T
Q  193 c 193  Q
    |    
T  26393392 c 26393392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 31504501 - 31504573
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctccttttt 235  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||| |||||    
T  31504501 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgactcttctctttttt 31504573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 31507067 - 31507139
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctccttttt 235  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||| |||||    
T  31507067 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgactcttctctttttt 31507139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 12627127 - 12627050
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    |||||||||||||| |||||||| ||| ||||| ||| |||||||||||||||||||||||||||||| |||||||||    
T  12627127 cacccttaccttagttaatcgaagtcgtagcccctcttggtcctcttcccttttcttgacttttctcccttttctctg 12627050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 39827283 - 39827195
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||| |||| |||||||| |||| ||  |||||||||||||||||||    
T  39827283 ttctcaaaaactaaccctacaacatgttaaatctaatcatcagaatcataggcttaagaagattgaatcttagtcccacccttacctta 39827195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 87 - 174
Target Start/End: Original strand, 34137828 - 34137915
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 174  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||| |||| |||||||| |||| ||| |||| |||||||||||||    
T  34137828 ttctcaaaaactaaccctacaacatgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagttccacccttacctt 34137915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 22458745 - 22458671
Alignment:
Q  120 taatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag-ataatcgaaatcgcagc 193  Q
    ||||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||| | |||||||||||||||    
T  22458745 taatcatcagaattacagacttaataaaattgaatgctagtctcacccttaccttagcaaaatcgaaatcgcagc 22458671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 43946606 - 43946518
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||| ||||||||||||||||| ||||||| ||||| |||||||| |||| ||||||||||||| ||| | |||  ||||||||||||    
T  43946606 ttctccaaaactaatcctacaacatgttaaatctaattatcagaatcataggcttaagaaaattgaatgtttgtcttacccttacctta 43946518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 19672753 - 19672822
Alignment:
Q  108 acttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    ||||||||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||||||||||||    
T  19672753 acttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttaccttaga 19672822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 24682190 - 24682278
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||||||||  |||| ||| |||||||||||||||||||    
T  24682190 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagacttaagattattgaatgttagtcccacccttacctta 24682278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 23792179 - 23792310
Alignment:
Q  108 acttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcc-cttctaggtcct 206  Q
    ||||||||||  ||||||||||||||| |||||||| || |||| ||||||| | |||||||||||||   | ||||||| |||||| ||| | ||| ||    
T  23792179 acttgttaaatttaatcatcagaattacagacttaataagattgaatgctaggctcacccttaccttaagaattcgaaattgcagcctcttgttggttct 23792278  T
Q  207 cttcccttttcttgacttttctcctttttctc 238  Q
      || ||| ||||||||||||||| |||||||    
T  23792279 tctctcttctcttgacttttctcccttttctc 23792310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 22106219 - 22106309
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||||    
T  22106219 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaga 22106309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 109 - 238
Target Start/End: Original strand, 24941586 - 24941714
Alignment:
Q  109 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtcctct 208  Q
    |||||||||  ||||||||||||||| |||||||| || |||| ||| | ||| ||||||||||||| |  || ||||||||||||| |||||||| ||     
T  24941586 cttgttaaatttaatcatcagaattacagacttaataagattgaatgtttgtctcacccttaccttataagat-gaaatcgcagcccctctaggtcttc- 24941683  T
Q  209 tcccttttcttgac-ttttctcctttttctc 238  Q
    |||||| ||||| | |||||||| |||||||    
T  24941684 tcccttctcttggctttttctcccttttctc 24941714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 7187395 - 7187476
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||| ||| |||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| ||||| |||||||||||||    
T  7187395 aaactaaacctccaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtctcacccttacctta 7187476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 238
Target Start/End: Complemental strand, 20519373 - 20519258
Alignment:
Q  124 catcagaattataga-cttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttctt-ga 221  Q
    ||||||||||||| | ||||| | ||||| ||||||||| ||||||||||||||| ||| |||||| |||||  |||||||| ||||| ||| |||| |     
T  20519373 catcagaattatacaacttaatagaattgaatgctagtctcacccttaccttaga-aattgaaatcacagcctctctaggtcttcttctcttctcttggt 20519275  T
Q  222 cttttctcctttttctc 238  Q
     ||||||||||||||||    
T  20519274 tttttctcctttttctc 20519258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 23079930 - 23079874
Alignment:
Q  119 ctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| || | ||||||||||||| ||| |||||||||||||||||||    
T  23079930 ctaatcatcagaatcatcggcttaagaaaattgaatgttagtcccacccttacctta 23079874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 23932214 - 23932302
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  23932214 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 23932302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 32214338 - 32214250
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  32214338 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 32214250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 174
Target Start/End: Original strand, 6726801 - 6726888
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 174  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||    
T  6726801 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 6726888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 24918894 - 24918985
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    |||||||||||||| |||||||| || ||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||||||    
T  24918894 ttctcaaaaactaaacctacaacatggtaaatagaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttagat 24918985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 22173060 - 22172979
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||| ||| |||| ||||||| ||||| |||| ||| |||| |||||||| |||| ||| ||||| |||||||||||||    
T  22173060 aaactaaacctccaacatgttaaatctaattatcataatcataggcttaagaagattgaatgttagtctcacccttacctta 22172979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 24688459 - 24688390
Alignment:
Q  170 accttagataatcgaaatcgcagcc-cttctaggtcctcttcccttttcttgacttttctcctttttctc 238  Q
    |||||||| ||||||||| |||||| ||||||||| ||| || ||| ||||||||||||||| |||||||    
T  24688459 accttagaaaatcgaaattgcagcctcttctaggttctcctctcttctcttgacttttctcccttttctc 24688390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 18809780 - 18809891
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  18809780 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 18809878  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  18809879 cacccttacctta 18809891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 176
Target Start/End: Original strand, 22695188 - 22695284
Alignment:
Q  81 cccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 176  Q
    ||||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||||||||||||||||    
T  22695188 cccaaattctcaaaaactaaaacctacaacatgttaaatcaaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttag 22695284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 23711338 - 23711227
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  23711338 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 23711240  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  23711239 cacccttacctta 23711227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 32038822 - 32038711
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  32038822 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 32038724  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  32038723 cacccttacctta 32038711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 34401830 - 34401734
Alignment:
Q  82 ccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    |||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||||    
T  34401830 ccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttaga 34401734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 43138262 - 43138330
Alignment:
Q  109 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    |||||||||  ||||||||||||||| |||| ||| || |||| ||| ||||| |||||||||||||||    
T  43138262 cttgttaaatttaatcatcagaattacagacctaataagattgaatgttagtctcacccttaccttaga 43138330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 45027308 - 45027220
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| |||||||||||||    
T  45027308 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 45027220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 175
Target Start/End: Original strand, 23131716 - 23131810
Alignment:
Q  82 ccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||    
T  23131716 ccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttacctta 23131810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 175
Target Start/End: Original strand, 23134183 - 23134277
Alignment:
Q  82 ccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||    
T  23134183 ccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttacctta 23134277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 23208218 - 23208318
Alignment:
Q  124 catcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgact 223  Q
    ||||| ||||| ||||| || | ||||| ||||||||| ||||||||||||||| ||| |||||| |||| ||| |||||| ||||| ||| ||||| ||    
T  23208218 catcaaaattacagactgaatagaattgaatgctagtctcacccttaccttaga-aattgaaatcacagctctt-taggtcttcttctcttctcttggct 23208315  T
Q  224 ttt 226  Q
    |||    
T  23208316 ttt 23208318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 173
Target Start/End: Complemental strand, 24897520 - 24897411
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||    
T  24897520 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcc 24897422  T
Q  163 cacccttacct 173  Q
    |||||||||||    
T  24897421 cacccttacct 24897411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 173
Target Start/End: Complemental strand, 24900003 - 24899894
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||    
T  24900003 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcc 24899905  T
Q  163 cacccttacct 173  Q
    |||||||||||    
T  24899904 cacccttacct 24899894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 173
Target Start/End: Complemental strand, 24902480 - 24902371
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||    
T  24902480 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcc 24902382  T
Q  163 cacccttacct 173  Q
    |||||||||||    
T  24902381 cacccttacct 24902371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 173
Target Start/End: Complemental strand, 24904957 - 24904848
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||    
T  24904957 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcc 24904859  T
Q  163 cacccttacct 173  Q
    |||||||||||    
T  24904858 cacccttacct 24904848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 173
Target Start/End: Complemental strand, 24907432 - 24907323
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||    
T  24907432 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcc 24907334  T
Q  163 cacccttacct 173  Q
    |||||||||||    
T  24907333 cacccttacct 24907323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 23706431 - 23706346
Alignment:
Q  90 tcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||||||| | |||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  23706431 tcaaaaactaaacatacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 23706346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 26506216 - 26506327
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||   ||||||||  |||||||||  |||| ||| |||||     
T  26506216 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaatttccagaattaatgacttaagattattgaatgttagtct 26506314  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  26506315 cacccttacctta 26506327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 27920089 - 27919978
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||   ||||||||  |||||||||  |||| ||| |||||     
T  27920089 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaatttccagaattaatgacttaagattattgaatgttagtct 27919991  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  27919990 cacccttacctta 27919978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 28577942 - 28578053
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  28577942 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 28578040  T
Q  163 cacccttacctta 175  Q
     ||||||||||||    
T  28578041 tacccttacctta 28578053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 37380508 - 37380560
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    ||||||||||||||||||||  | || ||| ||||| ||||||||||||||||    
T  37380508 tcagaattatagacttaagatcactgaatgatagtctcacccttaccttagat 37380560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 39683153 - 39683264
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  39683153 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaattcaattttcagaatcaatgacttaagattattgaatgttagtcc 39683251  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  39683252 cacccttacctta 39683264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 3985 - 4077
Alignment:
Q  148 attggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3985 attgaatgttagtctcacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 4077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 68 - 238
Target Start/End: Original strand, 25945 - 26113
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| | |||| ||| ||||| ||||||||| |||||||||  ||||||||||||||| || ||||| || |||| ||||||||| |||||    
T  25945 tttaacctaattctcaaatt-ctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacaggcttaataagattgaatgctagtctcaccc 26042  T
Q  168 ttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctc 238  Q
    |||||||||| ||||||||||||||||  ||| |||||||||  ||| ||||||||||||||| |||||||    
T  26043 ttaccttagaaaatcgaaatcgcagcctctcttggtcctcttatcttctcttgacttttctcccttttctc 26113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 9e-34; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 35367129 - 35367206
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35367129 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 35367206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 21064428 - 21064351
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  21064428 cacccttaccttagataatcgaaatcgcaacccttctaggtcctcttcccttttcttgacttttctcccttttctctg 21064351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 123407 - 123330
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  123407 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 123330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 13732752 - 13732675
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  13732752 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 13732675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 16929271 - 16929194
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  16929271 cacccttaccttagataatcaaaatcgcagtccttctaggtcctcttcccttttcttgacttttctcccttttctctg 16929194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 48786218 - 48786295
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  48786218 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 48786295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 16007322 - 16007399
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    |||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  16007322 cacccttaccttagataatcgaaaacgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 16007399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 42462835 - 42462924
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 176  Q
    |||| ||||||||| |||||||| ||||||| |||||||||||||| |||| |||||||| |||| ||| ||||||||||||||||||||    
T  42462835 ttctaaaaaactaaccctacaacatgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccacccttaccttag 42462924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 16997056 - 16997144
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||| ||||||||| |||||||| ||||||| |||||||||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  16997056 ttctaaaaaactaaccctacaacatgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 16997144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 11768197 - 11768090
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 164  Q
    ||||||||||||||| || | ||||  ||||||||| |||||| | ||||||| ||||||||||||||||||| |||||||| |||| ||| ||||||||    
T  11768197 acttttaacctaatttccaactttc--aaaaactaaacctaca-catgttaaatctaatcatcagaattataggcttaagaagattgaatgttagtccca 11768101  T
Q  165 cccttacctta 175  Q
    |||||||||||    
T  11768100 cccttacctta 11768090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 68 - 233
Target Start/End: Original strand, 15117335 - 15117500
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| |||| ||||| |||  |||||||||| |||||||||  |||||||||||| || |||||||| || |||| ||||||||| |||||    
T  15117335 tttaacctaattctccaacttctctaaat-taatcctaca-cttgttaaat-taatcatcagaagtacagacttaataagattgaatgctagtctcaccc 15117431  T
Q  168 ttaccttag-ataatcgaaatcgcag--cccttctaggtcctcttcccttttcttgacttttctccttt 233  Q
    ||||||||| | ||||||||||||||  | |||  |||| ||| || ||| ||||||||||||||||||    
T  15117432 ttaccttagcaaaatcgaaatcgcagctctcttgaaggttctcctctcttctcttgacttttctccttt 15117500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 37793473 - 37793392
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||| |||||||||||||||| ||||||||||||||||  | |||||||| |||| ||| |||||||||||||||||||    
T  37793473 aaactaaacctacaacttgttaaatctaatcatcagaattaacggcttaagaagattgaatgttagtcccacccttacctta 37793392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 9176922 - 9176835
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||| ||||||||||||||| |||||||||  |||| |||||||||| |||||||| ||||||| ||||||||| |||||||||||||    
T  9176922 ttctctaaaactaatcctaca-cttgttaaatttaattatcagaattacagacttaataaaattgaatgctagtctcacccttacctta 9176835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 92 - 184
Target Start/End: Original strand, 38519652 - 38519744
Alignment:
Q  92 aaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcga 184  Q
    ||||||||| |||||||| || |||| ||||| |||||||| |||| |||||||| |||| ||| |||||||||||||||| |||| ||||||    
T  38519652 aaaaactaaacctacaacatgctaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccacccttaccatagaaaatcga 38519744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 14037064 - 14037169
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| ||| ||| || ||||||||||||||| |||||||||   || ||||||||||| |||||||| | ||||| ||||||||| |||||    
T  14037064 tttaacctaattctccatttt-tctaaaactaatcctaca-cttgttaaatacaaccatcagaattacagacttaatagaattgaatgctagtctcaccc 14037161  T
Q  168 ttacctta 175  Q
    ||||||||    
T  14037162 ttacctta 14037169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 14347094 - 14347199
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| ||| ||| || ||||||||||||||| |||||||||   || ||||||||||| |||||||| | ||||| ||||||||| |||||    
T  14347094 tttaacctaattctccatttt-tctaaaactaatcctaca-cttgttaaatacaaccatcagaattacagacttaatagaattgaatgctagtctcaccc 14347191  T
Q  168 ttacctta 175  Q
    ||||||||    
T  14347192 ttacctta 14347199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 15113858 - 15113975
Alignment:
Q  120 taatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag-ataatcgaaatcgcag--cccttctaggtcctcttccctttt 216  Q
    |||||||||||| || |||||||| || |||| ||||||||| |||||||||||||| | ||||||||||||||  | |||  |||| ||| || ||| |    
T  15113858 taatcatcagaagtacagacttaataagattgaatgctagtctcacccttaccttagcaaaatcgaaatcgcagctctcttgaaggttctcctctcttct 15113957  T
Q  217 cttgacttttctcctttt 234  Q
    ||||||||||||||||||    
T  15113958 cttgacttttctcctttt 15113975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 16324817 - 16324936
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| |||| ||||| |||  |||||||||| |||||||||  |||||||||||| || |||||||| || |||| ||||||||| |||||    
T  16324817 tttaacctaattctccaacttctctaaat-taatcctaca-cttgttaaat-taatcatcagaagtacagacttaataagattgaatgctagtctcaccc 16324913  T
Q  168 ttaccttag-ataatcgaaatcg 189  Q
    ||||||||| | |||||||||||    
T  16324914 ttaccttagcaaaatcgaaatcg 16324936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 16496258 - 16496347
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    ||||| ||||| ||||||||| |||||||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||||| ||||||    
T  16496258 ttctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttatcttaga 16496347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 130030 - 129942
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 176  Q
    |||||||||||||| | |||||| ||||||| |||||||||||||| |||  |||||| | |||| ||| ||||||||||||||||||||    
T  130030 ttctcaaaaactaaccatacaacatgttaaatctaatcatcagaatcataagcttaag-agattgaatgttagtcccacccttaccttag 129942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 238
Target Start/End: Original strand, 3387452 - 3387579
Alignment:
Q  109 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtcctct 208  Q
    |||||||||  |||||||||||||||  ||||||| || |||| ||| ||||| ||||||||||||| |  || ||||||||||||| ||||| || |||    
T  3387452 cttgttaaatttaatcatcagaattacggacttaataagattgaatgttagtctcacccttaccttataagat-gaaatcgcagcccctctagctcttct 3387550  T
Q  209 tcccttttcttgacttttctcctttttctc 238  Q
    | |||| ||||| ||||||||| |||||||    
T  3387551 t-ccttctcttggcttttctcccttttctc 3387579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 14045636 - 14045741
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| ||||||| || ||||||||||||||| ||||||||    || ||||||||||| |||||||| | ||||| ||||||||| ||||     
T  14045636 tttaacctaattctccaattt-tctaaaactaatcctaca-cttgttaagtacaaccatcagaattacagacttaatagaattgaatgctagtctcacct 14045733  T
Q  168 ttacctta 175  Q
    ||||||||    
T  14045734 ttacctta 14045741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 14355666 - 14355771
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| ||||||| || ||||||||||||||| ||||||||    || ||||||||||| |||||||| | ||||| ||||||||| ||||     
T  14355666 tttaacctaattctccaattt-tctaaaactaatcctaca-cttgttaagtacaaccatcagaattacagacttaatagaattgaatgctagtctcacct 14355763  T
Q  168 ttacctta 175  Q
    ||||||||    
T  14355764 ttacctta 14355771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 193
Target Start/End: Complemental strand, 17016661 - 17016578
Alignment:
Q  111 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt-agataatcgaaatcgcagc 193  Q
    ||||||| |||||||||||||||||   ||||||| ||||| ||||||||| |||||||||||| | | |||||||||||||||    
T  17016661 tgttaaatctaatcatcagaattatcagcttaagagaattgaatgctagtctcacccttaccttaacaaaatcgaaatcgcagc 17016578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 238
Target Start/End: Complemental strand, 17052826 - 17052696
Alignment:
Q  111 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta--gataatcgaaatc-gcagcccttctaggtcctc 207  Q
    ||||||| |||||||||| |||||| | |||||||| |||| ||| |||||||||||||||||||   | |||||||||| ||||||  ||| | |  ||    
T  17052826 tgttaaatctaatcatcaaaattatcggcttaagaagattgaatgttagtcccacccttaccttaatcaaaatcgaaatcggcagcctctcttgattttc 17052727  T
Q  208 ttcccttttcttgacttttctcctttttctc 238  Q
    ||| ||| ||||||||||||||| |||||||    
T  17052726 ttctcttctcttgacttttctcccttttctc 17052696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 27217699 - 27217809
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 163  Q
    |||||||||| |||||||| |||| |||||||||||| |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||    
T  27217699 acttttaaccctaattcccaaatt-ctcaaaaactaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtccc 27217797  T
Q  164 acccttacctta 175  Q
    ||||||||||||    
T  27217798 acccttacctta 27217809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 87 - 177
Target Start/End: Complemental strand, 5294520 - 5294430
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||||    
T  5294520 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaga 5294430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 11524881 - 11524799
Alignment:
Q  93 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||| ||| ||||||| |||| |||||| | |||||||||  ||||||||||||| ||| ||||| |||||||||||||    
T  11524881 aaaactaaaccttcaacttgctaaatctaatctttagaattataagcttaagaaaattgaatgttagtctcacccttacctta 11524799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 18455671 - 18455590
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||| ||| |||| ||||||| ||||| |||||||| |||  |||||||| |||| ||| |||||||||||||||||||    
T  18455671 aaactaaacctccaacatgttaaatctaattatcagaatcatatgcttaagaagattgaatgttagtcccacccttacctta 18455590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 8941228 - 8941316
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  8941228 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 8941316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 177
Target Start/End: Complemental strand, 10062949 - 10062881
Alignment:
Q  109 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    |||||||||  ||||||||||||||| |||||||| || |||| ||| ||||| |||||||||||||||    
T  10062949 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttaga 10062881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 13870183 - 13870294
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||||||||||    
T  13870183 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgctagtcc 13870281  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  13870282 cacccttacctta 13870294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 174
Target Start/End: Original strand, 11973109 - 11973196
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 174  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||    
T  11973109 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 11973196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 15440214 - 15440311
Alignment:
Q  140 ttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcctttttctc 238  Q
    |||| ||||||| ||||||||| ||||||||||||||| ||| ||||| ||||| | |||||||| || |||||| ||||||| |||||||| |||||||    
T  15440214 ttaataaaattgaatgctagtctcacccttaccttaga-aattgaaattgcagctc-tctaggtcttcctcccttctcttgactttttctcccttttctc 15440311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 26355304 - 26355194
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 163  Q
    |||||||||| |||||||| |||| |||||||||||| |||||||| |||||||   |||  || |||| ||||||| ||||  |||| ||| |||||||    
T  26355304 acttttaaccctaattcccaaatt-ctcaaaaactaaacctacaacatgttaaatacaattttcggaatcatagactcaagattattgaatgttagtccc 26355206  T
Q  164 acccttacctta 175  Q
    ||||||||||||    
T  26355205 acccttacctta 26355194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 26357756 - 26357646
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 163  Q
    |||||||||| |||||||| |||| |||||||||||| |||||||| |||||||   |||  || |||| ||||||| ||||  |||| ||| |||||||    
T  26357756 acttttaaccctaattcccaaatt-ctcaaaaactaaacctacaacatgttaaatacaattttcggaatcatagactcaagattattgaatgttagtccc 26357658  T
Q  164 acccttacctta 175  Q
    ||||||||||||    
T  26357657 acccttacctta 26357646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 177
Target Start/End: Complemental strand, 5295693 - 5295603
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    |||||||||||||| |||||||| ||||||    |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||||    
T  5295693 ttctcaaaaactaaacctacaacatgttaattacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaga 5295603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 177
Target Start/End: Complemental strand, 5296866 - 5296776
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    |||||||||||||| |||||||| ||||||    |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||||    
T  5296866 ttctcaaaaactaaacctacaacatgttaattacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaga 5296776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 219
Target Start/End: Complemental strand, 15007726 - 15007606
Alignment:
Q  98 taatcctacaacttgttaaagctaatcatcagaattataga-cttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagccct 196  Q
    |||||||||| |||||||||   || ||||||||||||| | ||||| | ||||| ||||||||| ||||||||||||||| ||| ||||| ||||||      
T  15007726 taatcctaca-cttgttaaatacaaccatcagaattatacaacttaatagaattgaatgctagtctcacccttaccttaga-aattgaaattgcagcctc 15007629  T
Q  197 tctaggtcctcttcccttttctt 219  Q
    |||||||| ||||| ||| ||||    
T  15007628 tctaggtcttcttctcttctctt 15007606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 161
Target Start/End: Complemental strand, 9032623 - 9032530
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtc 161  Q
    ||||||||||||||| |  || |||||||||||||| |||| | | ||||||| ||||| |||||||| |||| ||||||||||||| ||| |||||    
T  9032623 acttttaacctaatttc--aaattctcaaaaactaaacctaga-catgttaaatctaataatcagaatcataggcttaagaaaattgaatgttagtc 9032530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 178
Target Start/End: Complemental strand, 14156493 - 14156389
Alignment:
Q  73 cctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacc 172  Q
    |||||||| |||||| |||||| ||||| |||||||| ||| |||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||    
T  14156493 cctaattctccaatt-ctcaaagactaaacctacaacatgtcaaataaaattttcagaatcatagactcaagattattgaatgatagtcccacccttacc 14156395  T
Q  173 ttagat 178  Q
    ||||||    
T  14156394 ttagat 14156389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 457160 - 457271
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  457160 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 457258  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  457259 cacccttacctta 457271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 8469296 - 8469384
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| || |  |||| ||| |||||||||||||||||||    
T  8469296 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaaaattattgaatgttagtcccacccttacctta 8469384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 9945098 - 9945010
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| |||||||||||||    
T  9945098 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 9945010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 14269172 - 14269084
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||| | |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  14269172 ttctcaaaaactaaacctacagcatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 14269084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 15376038 - 15375927
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  15376038 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 15375940  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  15375939 cacccttacctta 15375927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 20384448 - 20384337
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  20384448 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 20384350  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  20384349 cacccttacctta 20384337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 23461721 - 23461633
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| |||||||||||||    
T  23461721 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 23461633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 42374354 - 42374302
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    ||||||| |||| |||||||| |||| ||| ||||||||||||||||||||||    
T  42374354 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttagat 42374302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 1856450 - 1856399
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    ||||||| |||| |||||||| |||| ||| |||||||||||||||||||||    
T  1856450 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaga 1856399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 11392625 - 11392516
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 163  Q
    |||||||||| |||||||| |||| |||||||||||  ||||||||| ||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||    
T  11392625 acttttaaccctaattcccaaatt-ctcaaaaactatacctacaact-gttaaatacaattttcagaatcatagactcaagattattgaatgttagtccc 11392528  T
Q  164 acccttacctta 175  Q
    ||||||||||||    
T  11392527 acccttacctta 11392516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 13648284 - 13648335
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    ||||||| |||| |||||||| |||| ||| |||||||||||||||||||||    
T  13648284 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaga 13648335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 13917622 - 13917571
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    ||||||| |||| |||||||| |||| ||| |||||||||||||||||||||    
T  13917622 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaga 13917571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 47832692 - 47832790
Alignment:
Q  140 ttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcctttttctc 238  Q
    |||| ||||||| ||| ||||| ||||||||||||||| | || |||||||||| ||||||||||   ||| ||| ||||||| |||||||| |||||||    
T  47832692 ttaataaaattgaatgttagtctcacccttaccttaga-attcaaaatcgcagctcttctaggtcactttctcttctcttgactttttctcccttttctc 47832790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 175
Target Start/End: Complemental strand, 14317621 - 14317516
Alignment:
Q  69 ttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccct 168  Q
    |||||||||||| | |||| |||||||| ||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| ||||||    
T  14317621 ttaacctaattctcaaatt-ctcaaaaaataaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcaccct 14317523  T
Q  169 tacctta 175  Q
    |||||||    
T  14317522 tacctta 14317516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 19486022 - 19485972
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 176  Q
    ||||||| |||| |||||||| |||| ||| ||||||||||||||||||||    
T  19486022 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttag 19485972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 109 - 175
Target Start/End: Original strand, 48274487 - 48274553
Alignment:
Q  109 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||  ||||||||||||||| |||||| | || |||| ||| ||||| |||||||||||||    
T  48274487 cttgttaaatttaatcatcagaattacagacttgataagattgaatgttagtctcacccttacctta 48274553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 13394679 - 13394646
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagccct 196  Q
    ||||||||||||||||||||||| ||||||||||    
T  13394679 cacccttaccttagataatcgaagtcgcagccct 13394646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 16410919 - 16411008
Alignment:
Q  87 ttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||    
T  16410919 ttctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttacctta 16411008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 17504970 - 17504937
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagccct 196  Q
    ||||||||||||||||||||||| ||||||||||    
T  17504970 cacccttaccttagataatcgaagtcgcagccct 17504937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 17548244 - 17548277
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagccct 196  Q
    ||||||||||||||||||||||| ||||||||||    
T  17548244 cacccttaccttagataatcgaagtcgcagccct 17548277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 204
Target Start/End: Original strand, 41523757 - 41523896
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  |||||||    |||||||||  |||| ||| ||||||    
T  41523757 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcgatgacttaagattattgaatgttagtcc 41523855  T
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtc 204  Q
    ||||||||||||| |  ||  |||||||||| ||||||||||    
T  41523856 cacccttaccttata-gatgaaaatcgcagcacttctaggtc 41523896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 238
Target Start/End: Complemental strand, 9388946 - 9388856
Alignment:
Q  147 aattggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcctttttctc 238  Q
    ||||| ||||||||| ||||||||||||| | ||| ||||||||||| | |||||||| || |||||| ||||| | |||||||| |||||||    
T  9388946 aattgaatgctagtctcacccttacctta-agaattgaaatcgcagctc-tctaggtcttcctcccttctcttggctttttctcccttttctc 9388856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 10500784 - 10500732
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||||||    
T  10500784 tcagaatcatagactcaagattattgaatgatagtcccacccttaccttagat 10500732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 13893449 - 13893501
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    ||||||| ||||||||||||  | || ||| ||||||||||||||||||||||    
T  13893449 tcagaatcatagacttaagatcactgaatgatagtcccacccttaccttagat 13893501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 25926349 - 25926301
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttacctt 174  Q
    ||||||| |||| |||||||| |||| ||| ||||||||||||||||||    
T  25926349 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctt 25926301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 45846853 - 45846765
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||| ||| | ||||| ||||  |||| ||| |||||||||||||||||||    
T  45846853 ttctcaaaaactaaacctacaacatgttaaatacaattttcaaaatcagagactcaagattattgaatgttagtcccacccttacctta 45846765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 9e-34; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 21683860 - 21684012
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcg-aa 185  Q
    |||||||||||||| ||||||| |||||||| |||| |||||||||||||||||||||||||||| ||| ||||| |||||||||||||   ||||| ||    
T  21683860 ttctcaaaaactaaccctacaagttgttaaatctaaccatcagaattatagacttaagaaaattgaatgttagtctcacccttaccttaacaaatcgaaa 21683959  T
Q  186 atcgcagccct-tctaggtcctcttcccttttcttgacttttctcctttttctc 238  Q
    ||||||||  | ||||||| |||||| ||| |||||||||||||||||||||||    
T  21683960 atcgcagctttctctaggt-ctcttctcttctcttgacttttctcctttttctc 21684012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 20580369 - 20580446
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  20580369 cacccttaccttagataatcgaaatcgcagcccttctaggttctcttcccttttcttgactcttctcctttttctctg 20580446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 14431569 - 14431492
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  14431569 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 14431492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 20632221 - 20632298
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  20632221 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 20632298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 22899470 - 22899393
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  22899470 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 22899393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 36182480 - 36182557
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  36182480 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 36182557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 37359373 - 37359450
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  37359373 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 37359450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 45495371 - 45495294
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| |||||||||    
T  45495371 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgactgttctcccttttctctg 45495294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 21042597 - 21042496
Alignment:
Q  83 caatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatc 182  Q
    |||||||||||||||||| |||||||| ||||||| ||||| |||| ||| |||| |||||||| |||| ||| ||||||||||||||||||||| ||||    
T  21042597 caatttctcaaaaactaaacctacaacatgttaaatctaattatcataatcataggcttaagaagattgaatgttagtcccacccttaccttagaaaatc 21042498  T
Q  183 ga 184  Q
    ||    
T  21042497 ga 21042496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 24088320 - 24088397
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    |||||||||||||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||||| |||||||||    
T  24088320 cacccttaccttagttaatcgaagtcgcagcccctcttggtcctcttcccttttcttgacttttctcccttttctctg 24088397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 47191465 - 47191553
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||| ||||||||||||||||| ||||||| |||||||||||||| |||| |||||||||| || ||| |||||||||||||||||||    
T  47191465 ttctccaaaactaatcctacaacatgttaaatctaatcatcagaatcataggcttaagaaaactgaatgttagtcccacccttacctta 47191553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 68 - 238
Target Start/End: Original strand, 50687457 - 50687626
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| | |||| ||| ||||| ||||||||| |||||||||  ||||||||||||||| |||||||| || |||| ||||||||| ||| |    
T  50687457 tttaacctaattctcaaatt-ctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacagacttaataagattgaatgctagtctcactc 50687554  T
Q  168 ttaccttagataatcgaaatcgcagcc-cttctaggtcctcttcccttttcttgacttttctcctttttctc 238  Q
    ||||||||   | |||||||||||||| ||| | ||| ||  || ||||||||||||||||||| |||||||    
T  50687555 ttaccttaagaattcgaaatcgcagcctcttgttggttcttctctcttttcttgacttttctcccttttctc 50687626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 22125162 - 22125251
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 176  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||| |||| |||||||| |||| ||| || |||||||||||||||||    
T  22125162 ttctcaaaaactaaccctacaacatgttaaatctaatcatcagaatcataggcttaagaagattgaatgttactcccacccttaccttag 22125251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 15859403 - 15859300
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaa 186  Q
    |||||||||||||| |||||||| |||||||  ||||||||||||||| |||||||| | ||||  ||||||||| ||||||||||||| |||||| |||    
T  15859403 ttctcaaaaactaaacctacaacatgttaaa--taatcatcagaattacagacttaatagaattaaatgctagtctcacccttacctta-ataatcaaaa 15859307  T
Q  187 tcgcagc 193  Q
    |||||||    
T  15859306 tcgcagc 15859300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 27652497 - 27652390
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    |||||| |||||| |||||| ||| ||||||||| ||||| |||||||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||    
T  27652497 tttaacttaattctccaatt-ctctaaaactaattctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcaccc 27652400  T
Q  168 ttaccttaga 177  Q
    ||||||||||    
T  27652399 ttaccttaga 27652390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 21342956 - 21343043
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||| ||||| ||||||||| |||||||||  ||||||||||||||| |||||||| | ||||| |||||||||||||||||||||||    
T  21342956 ttctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtcccacccttacctta 21343043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 21347821 - 21347908
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||| ||||| ||||||||| |||||||||  ||||||||||||||| |||||||| | ||||| |||||||||||||||||||||||    
T  21347821 ttctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtcccacccttacctta 21347908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 20958998 - 20959081
Alignment:
Q  92 aaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||||| ||| |||| ||||||| |||||||||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  20958998 aaaaactaaaccttcaacatgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 20959081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 177
Target Start/End: Complemental strand, 14294815 - 14294726
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    ||||| ||||| ||||||||| |||||||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||||||||||||    
T  14294815 ttctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttaccttaga 14294726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 51131421 - 51131510
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    ||||| ||||| ||||||||| |||||||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||||||||||||    
T  51131421 ttctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttaccttaga 51131510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 52940112 - 52940027
Alignment:
Q  90 tcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||||||| |||||||| ||||||| |||||||||||||||| || |||||||| |||| ||| ||||| ||| |||||||||    
T  52940112 tcaaaaactaaccctacaacatgttaaatctaatcatcagaattaaaggcttaagaagattgaatgttagtctcactcttacctta 52940027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 102 - 193
Target Start/End: Original strand, 22777340 - 22777431
Alignment:
Q  102 cctacaacttgttaaagctaatcatcagaattat-agacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagc 193  Q
    |||||||||||||||| ||||||||||||||||| || ||||||||||||| ||| ||||| |||||| |||||| | |||| ||||||||||    
T  22777340 cctacaacttgttaaatctaatcatcagaattataaggcttaagaaaattgaatgttagtctcaccctaaccttata-aatcaaaatcgcagc 22777431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 26065861 - 26065963
Alignment:
Q  124 catcagaattataga-cttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgac 222  Q
    ||||||||||||| | ||||| | ||||| ||||||||| ||||||||||||||| ||| |||||||||||| ||||||||| ||||| ||| ||||| |    
T  26065861 catcagaattatacaacttaatagaattgaatgctagtctcacccttaccttaga-aattgaaatcgcagcctttctaggtcttcttctcttctcttggc 26065959  T
Q  223 tttt 226  Q
    ||||    
T  26065960 tttt 26065963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 89 - 175
Target Start/End: Original strand, 16382001 - 16382087
Alignment:
Q  89 ctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||||||||||||||||| |||||||   || |||  |||||| |||||||| | ||||| |||||||||||||||||||||||    
T  16382001 ctcaaaaactaatcctacaacatgttaaatacaaccatatgaattacagacttaatagaattgaatgctagtcccacccttacctta 16382087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 48521359 - 48521463
Alignment:
Q  69 ttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccct 168  Q
    |||||||||||| |||||| ||||||| |||| ||| |||| ||||||| ||||| |||||||| | || |||||||| |||| ||| ||||||||||||    
T  48521359 ttaacctaattctccaatt-ctcaaaa-ctaaacctccaacatgttaaatctaattatcagaatcacaggcttaagaagattgaatgttagtcccaccct 48521456  T
Q  169 tacctta 175  Q
    |||||||    
T  48521457 tacctta 48521463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 41049209 - 41049110
Alignment:
Q  138 acttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcctttttc 236  Q
    |||||| | ||||| ||||||||| ||||||||||||||| ||| ||||||||||||| |||||||||||||| ||| ||||| | |||||||| |||||    
T  41049209 acttaatagaattgaatgctagtctcacccttaccttaga-aattgaaatcgcagccc-tctaggtcctcttcacttctcttggctttttctcccttttc 41049112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 35568991 - 35569051
Alignment:
Q  3 caattaatcacaagctagaacaagaagaaaaatgattatgagaataagtatctaaccccct 63  Q
    |||||||| | |||||||||||||| ||||| |||||||||||||||||||| ||||||||    
T  35568991 caattaattataagctagaacaagatgaaaagtgattatgagaataagtatccaaccccct 35569051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 234
Target Start/End: Original strand, 12272435 - 12272601
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| |||| ||||| |||  |||||||||| |||||||||  ||||||||||||  | | |||||| || |||| ||||||||| ||| |    
T  12272435 tttaacctaattctccaacttctctaaat-taatcctaca-cttgttaaat-taatcatcagaagaaaaaacttaataagattgaatgctagtcgcactc 12272531  T
Q  168 ttaccttag-ataatcgaaatcgcag--cccttctaggtcctcttcccttttcttgacttttctcctttt 234  Q
    ||||||||| | ||||||||||||||  | |||  |||| ||| || ||| |||||||||||||||||||    
T  12272532 ttaccttagcaaaatcgaaatcgcagctctcttgaaggttctcctctcttctcttgacttttctcctttt 12272601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 125 - 230
Target Start/End: Complemental strand, 50613289 - 50613183
Alignment:
Q  125 atcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcc-cttctaggtcctcttcccttttcttgact 223  Q
    |||| ||||| |||||||| |  |||| ||| ||||| ||||||||||||||| |||||||||||||||| ||  | |||||||||| ||| | ||||||    
T  50613289 atcataattacagacttaataggattgaatgttagtctcacccttaccttagaaaatcgaaatcgcagcctctctttggtcctcttctcttctattgact 50613190  T
Q  224 tttctcc 230  Q
    |||||||    
T  50613189 tttctcc 50613183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 125 - 230
Target Start/End: Complemental strand, 50621117 - 50621011
Alignment:
Q  125 atcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcc-cttctaggtcctcttcccttttcttgact 223  Q
    |||| ||||| |||||||| |  |||| ||| ||||| ||||||||||||||| |||||||||||||||| ||  | |||||||||| ||| | ||||||    
T  50621117 atcataattacagacttaataggattgaatgttagtctcacccttaccttagaaaatcgaaatcgcagcctctctttggtcctcttctcttctattgact 50621018  T
Q  224 tttctcc 230  Q
    |||||||    
T  50621017 tttctcc 50621011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 13880619 - 13880538
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||| ||| |||| ||||||| ||||| |||||||| | || |||||||| |||| ||| |||||||||||||||||||    
T  13880619 aaactaaacctccaacatgttaaatctaattatcagaatcacaggcttaagaagattgaatgttagtcccacccttacctta 13880538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 193
Target Start/End: Complemental strand, 20453731 - 20453619
Alignment:
Q  81 cccaatttctcaaaaacta-atcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagata 179  Q
    ||||| ||||||||||||| | |||||| | ||||||| ||||| |||| ||| |||| |||||||| |||| ||| ||||| ||||||||||||| | |    
T  20453731 cccaaattctcaaaaactataacctacagcatgttaaatctaattatcaaaatcataggcttaagaagattgaatgttagtctcacccttacctta-aca 20453633  T
Q  180 atcgaaatcgcagc 193  Q
    ||| ||||||||||    
T  20453632 atcaaaatcgcagc 20453619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 14237766 - 14237655
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| ||||||||||||  |||| ||  ||||||    
T  14237766 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcatagacttaagattattgaatattagtcc 14237668  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  14237667 cacccttacctta 14237655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 46560042 - 46560130
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  46560042 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 46560130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 51083115 - 51083226
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||| ||| ||||||||||||  |||| ||| ||||||    
T  51083115 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcaaaatcatagacttaagattattgaatgttagtcc 51083213  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  51083214 cacccttacctta 51083226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 22050438 - 22050347
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    |||||||||||||| |||||||| | |||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||||||    
T  22050438 ttctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttagat 22050347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 193
Target Start/End: Complemental strand, 22130075 - 22130009
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagc 193  Q
    ||||||| |||| |||||||| |||| ||| ||||||||||||||||||| |||||| ||||||||||    
T  22130075 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta-ataatcaaaatcgcagc 22130009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 237
Target Start/End: Original strand, 40390158 - 40390306
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagac-ttaagaaaattggatgctagtcccacccttaccttagataatcgaa 185  Q
    ||||| ||||| ||||||||| |||||||||   |||||||||||||||| |  |||| | ||||| ||||||||| ||||||||||||| | ||| |||    
T  40390158 ttctctaaaaccaatcctaca-cttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttaccttatagaat-gaa 40390255  T
Q  186 atcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttct 237  Q
    |||||||| | |||||||  |  |||||| ||||| ||||||||| ||||||    
T  40390256 atcgcagctc-tctaggtgtttctcccttctcttggcttttctcccttttct 40390306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 81 - 177
Target Start/End: Original strand, 41373327 - 41373424
Alignment:
Q  81 cccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    ||||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||||    
T  41373327 cccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttaga 41373424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 13989703 - 13989814
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  13989703 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 13989801  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  13989802 cacccttacctta 13989814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 48444349 - 48444445
Alignment:
Q  82 ccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    |||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||||    
T  48444349 ccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttaga 48444445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 13212280 - 13212175
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagac-ttaagaaaattggatgctagtcccacccttaccttagataatcgaa 185  Q
    ||||| ||||| ||||||||| |||||||||   |||||||||||||||| |  |||| | ||||| ||||||||| ||||||||||||| | ||| |||    
T  13212280 ttctctaaaaccaatcctaca-cttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttaccttatagaat-gaa 13212183  T
Q  186 atcgcagc 193  Q
    ||||||||    
T  13212182 atcgcagc 13212175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 22122255 - 22122168
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 174  Q
    |||||||||||||| |||||||| | |||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||    
T  22122255 ttctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 22122168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 29298995 - 29299086
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    |||||||||||||| |||||||| | |||||   |||  ||||||| ||||| | ||||  |||| ||| ||||||||||||||||||||||    
T  29298995 ttctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagattcaagattattgaatgttagtcccacccttaccttagat 29299086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 41231028 - 41230941
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 174  Q
    |||||||||||||| | |||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||    
T  41231028 ttctcaaaaactaaacttacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 41230941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 43629352 - 43629297
Alignment:
Q  120 taatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||||||||||| |||||||| || |||| ||| ||||| |||||||||||||    
T  43629352 taatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 43629297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 175
Target Start/End: Original strand, 16362774 - 16362868
Alignment:
Q  82 ccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||    
T  16362774 ccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttacctta 16362868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 177
Target Start/End: Complemental strand, 23593055 - 23592942
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  |||||||    |||||||||  |||| ||| ||||||    
T  23593055 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcgatgacttaagattattgaatgttagtcc 23592957  T
Q  163 cacccttaccttaga 177  Q
    |||||||||||||||    
T  23592956 cacccttaccttaga 23592942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 45574067 - 45574018
Alignment:
Q  128 agaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    ||||| |||| |||||||| |||| ||| |||||||||||||||||||||    
T  45574067 agaatcataggcttaagaagattgaatgttagtcccacccttaccttaga 45574018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 9044606 - 9044518
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| ||||||    |||  ||||||| ||||||| ||||  |||| ||| ||||| |||||||||||||    
T  9044606 ttctcaaaaactaaacctacaacatgttaagtacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 9044518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 16274661 - 16274573
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||| ||| ||||||| ||||  |||| ||| ||||| |||||||||||||    
T  16274661 ttctcaaaaactaaacctacaacatgttaaatacaattttcaaaatcatagactcaagattattgaatgttagtctcacccttacctta 16274573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 21474409 - 21474298
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  |||||||    |||||||||  |||| ||| ||||||    
T  21474409 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcgatgacttaagattattgaatgttagtcc 21474311  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  21474310 cacccttacctta 21474298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 21922614 - 21922503
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||| ||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  21922614 acttttaaccctaattcccaaatt-ctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 21922516  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  21922515 cacccttacctta 21922503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 49262015 - 49262105
Alignment:
Q  147 aattggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcctttttctc 238  Q
    ||||| |||||| || ||||||||||||||| ||| ||||||||||| | |||||||| || |||||| ||||| | |||||||| |||||||    
T  49262015 aattgaatgctaatctcacccttaccttaga-aattgaaatcgcagctc-tctaggtcttcctcccttctcttggctttttctcccttttctc 49262105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 87 - 235
Target Start/End: Complemental strand, 128185 - 128038
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaa 186  Q
    ||||| ||||||||||||||| |||||||||  ||||||||||||||| | |||||| || |||| |||||| || ||||||||||||||| ||||||||    
T  128185 ttctctaaaactaatcctaca-cttgttaaatttaatcatcagaattacaaacttaataagattgaatgctaatctcacccttaccttagaaaatcgaaa 128087  T
Q  187 tcgcagcccttctaggtcctcttcccttttcttgacttttctccttttt 235  Q
    ||||| ||  ||| |||||||||| ||| ||||||||||||||||||||    
T  128086 tcgcaacctctcttggtcctcttctcttctcttgacttttctccttttt 128038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 81191 - 81291
Alignment:
Q  124 catcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgact 223  Q
    ||||||||||| || ||||| | ||||| ||||||||| ||||||||||||||| | ||||||||||||| | |||||||||||||| ||| ||||| ||    
T  81191 catcagaattacagccttaatagaattgaatgctagtctcacccttaccttaga-attcgaaatcgcagctc-tctaggtcctcttctcttctcttggct 81288  T
Q  224 ttt 226  Q
    |||    
T  81289 ttt 81291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 4799 - 4876
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  4799 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttcttccttttctctg 4876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 21414443 - 21414366
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  21414443 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttcttccttttctctg 21414366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 7300279 - 7300202
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||    
T  7300279 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgactcttctcctttttctctg 7300202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 17615821 - 17615898
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||    
T  17615821 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgactcttctcctttttctctg 17615898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 69 - 238
Target Start/End: Original strand, 24353912 - 24354079
Alignment:
Q  69 ttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccct 168  Q
    |||||||||||| | |||| ||| |||||||| | |||| |||||||||  ||||||||||||||| |||||||| || |||| ||||||||| ||||||    
T  24353912 ttaacctaattctcaaatt-ctctaaaactaaccataca-cttgttaaatttaatcatcagaattacagacttaataagattgaatgctagtctcaccct 24354009  T
Q  169 taccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctc 238  Q
    ||||||||| |||| ||||||||| |  ||| |||||||||| ||| |||||||||||| || |||||||    
T  24354010 taccttagaaaatcaaaatcgcagtctctctcggtcctcttctcttctcttgacttttcccccttttctc 24354079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 24707024 - 24706947
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  24707024 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 24706947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 22144601 - 22144524
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||    
T  22144601 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttttctg 22144524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 44432972 - 44433049
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||    
T  44432972 cacccttaccttagatattcgaaatcgcagaccttctaggtcctcttcccttttcttgactcttctcccttttctctg 44433049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 10834120 - 10834043
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    |||||||||||||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||||| |||||||||    
T  10834120 cacccttaccttagttaatcgaagtcgcagcccctcttggtcctcttcccttttcttgacttttctcccttttctctg 10834043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 22245325 - 22245228
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcga 184  Q
    |||||||||||||| |||||||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| ||||||||||||||||||||| ||||||    
T  22245325 ttctcaaaaactaaacctacaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccacccttaccttagaaaatcga 22245228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 22252403 - 22252306
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcga 184  Q
    |||||||||||||| |||||||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| ||||||||||||||||||||| ||||||    
T  22252403 ttctcaaaaactaaacctacaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccacccttaccttagaaaatcga 22252306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 17438770 - 17438602
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| | |||| |||| ||||||||||||||||||||||||    | ||||||||| |||||||||| | ||||| ||||||||| || ||    
T  17438770 tttaacctaattctcaaatt-ctcacaaactaatcctacaacttgttaaatacgaccatcagaatcatagacttaatagaattgaatgctagtctcaacc 17438672  T
Q  168 ttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctc 238  Q
    ||||||||   ||||||||||||||||   || ||| |||||| | | ||||||||||||||| |||||||    
T  17438671 ttaccttaagaaatcgaaatcgcagcctcccttggt-ctcttctcctctcttgacttttctcccttttctc 17438602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 65 - 193
Target Start/End: Original strand, 22526353 - 22526478
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattat-agacttaagaaaattggatgctagtccc 163  Q
    |||||||||||||||||| |  ||||||||| |||| |||||||||||||||| |||||||||| |||||| || ||||||||||||| ||| ||||| |    
T  22526353 acttttaacctaattcccaa--ttctcaaaa-ctaaacctacaacttgttaaatctaatcatcaaaattataaggcttaagaaaattgaatgttagtctc 22526449  T
Q  164 acccttaccttagataatcgaaatcgcagc 193  Q
    |||||||||||| | |||| ||||||||||    
T  22526450 acccttaccttata-aatcaaaatcgcagc 22526478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 65 - 238
Target Start/End: Original strand, 16800303 - 16800473
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattat-agacttaagaaaattggatgctagtccc 163  Q
    |||||||||||||||||| |  |||||||||  ||  |||||||||||||||| |||||||| |||||||| || ||||||||||||| ||| ||||| |    
T  16800303 acttttaacctaattcccaa--ttctcaaaat-tatacctacaacttgttaaatctaatcattagaattataaggcttaagaaaattgaatgatagtctc 16800399  T
Q  164 acccttaccttagataatcgaaatcg-cagcccttctaggtcctcttcccttttcttgacttttctcctttttctc 238  Q
    |||||||||||  |||||| |||||| |||||  | | ||| |||||| ||| ||||||||||||||| |||||||    
T  16800400 acccttacctt--ataatcaaaatcgccagcctcttttggttctcttctcttctcttgacttttctcccttttctc 16800473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 19936326 - 19936178
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaa 186  Q
    |||||||||||||| |||||||| |||||||  ||||||||||||||| |||||||| | ||||| ||||||||| ||||||||||||| |||||  |||    
T  19936326 ttctcaaaaactaaacctacaacatgttaaa--taatcatcagaattacagacttaatagaattgaatgctagtctcacccttacctta-ataataaaaa 19936230  T
Q  187 tcgcagcccttctaggtcctcttcccttttcttgac-ttttctcctttttctc 238  Q
    |||||| | | ||||||| |  |||||| ||||| | ||||||||||||||||    
T  19936229 tcgcag-cttcctaggtctttctcccttctcttggctttttctcctttttctc 19936178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 6607474 - 6607402
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctccttttt 235  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| ||||| |||||    
T  6607474 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttccctttccttgactcttctctttttt 6607402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 99 - 238
Target Start/End: Original strand, 22365531 - 22365670
Alignment:
Q  99 aatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagc-cctt 197  Q
    ||||||||| |||||||||  ||||||||||||||| |||||||| || |||| ||||||||| ||||||||||||||| |||||||||| ||||  |||    
T  22365531 aatcctaca-cttgttaaatttaatcatcagaattacagacttaataagattgaatgctagtctcacccttaccttagaaaatcgaaatcccagcttctt 22365629  T
Q  198 ctaggtcctcttcccttttcttgacttttctcctttttctc 238  Q
     | ||| ||  || ||| ||||||||||||||| |||||||    
T  22365630 gttggttcttctctcttctcttgacttttctcccttttctc 22365670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 28398452 - 28398540
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||| ||||||||||||||||| ||||||  |||||||||||||| |||| ||||||||||||| ||| ||||| |||||||||||||    
T  28398452 ttctccaaaactaatcctacaacatgttaattctaatcatcagaatcataggcttaagaaaattgaatgttagtctcacccttacctta 28398540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 20501318 - 20501230
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||| ||| |||| ||| ||||||| |||||||||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  20501318 ttctcaaaaagtaaccctaaaacatgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 20501230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 111 - 238
Target Start/End: Original strand, 22996699 - 22996827
Alignment:
Q  111 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatc-gcagcccttctaggtcctctt 209  Q
    ||||||| |||||||||| ||| |||| |||||||| |||| ||| ||||| |||||||||||||   |||||||||| ||||||  ||| ||| |||||    
T  22996699 tgttaaatctaatcatcaaaatcataggcttaagaagattgaatgttagtctcacccttaccttaacaaatcgaaatcggcagcctctcttggttctctt 22996798  T
Q  210 cccttttcttgacttttctcctttttctc 238  Q
    | ||| ||||||||||||||| |||||||    
T  22996799 ctcttctcttgacttttctcccttttctc 22996827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 17085154 - 17085077
Alignment:
Q  91 caaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccct 168  Q
    |||||||||| |||||||||||||||| |||||||||| ||||| || |||||||| |||| ||| ||||||||||||    
T  17085154 caaaaactaaccctacaacttgttaaatctaatcatcataattaaaggcttaagaagattgaatgttagtcccaccct 17085077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 17085388 - 17085311
Alignment:
Q  91 caaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccct 168  Q
    |||||||||| |||||||||||||||| |||||||||| ||||| || |||||||| |||| ||| ||||||||||||    
T  17085388 caaaaactaaccctacaacttgttaaatctaatcatcataattaaaggcttaagaagattgaatgttagtcccaccct 17085311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 82 - 238
Target Start/End: Complemental strand, 17266235 - 17266080
Alignment:
Q  82 ccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataat 181  Q
    |||| ||||| ||||| ||||||||| |||||||||   || ||||||||||| ||| |||| || |||| ||| ||||| ||||||||||||||| |||    
T  17266235 ccaacttctctaaaac-aatcctaca-cttgttaaatacaaccatcagaattacagatttaataagattgaatgttagtctcacccttaccttagaaaat 17266138  T
Q  182 cgaaatcgcagcc-cttctaggtcctcttcccttttcttgacttttctcctttttctc 238  Q
    ||||||||||||| ||  | |||||||||  ||| ||||||||||| ||| |||||||    
T  17266137 cgaaatcgcagcctctctttggtcctcttatcttctcttgacttttatcccttttctc 17266080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 22184011 - 22184092
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||| |||||||||||||||| ||||||||||||||||||  |||||||||| || ||| || || |||||||||||||    
T  22184011 aaactaaacctacaacttgttaaatctaatcatcagaattataagcttaagaaaactgaatgttattctcacccttacctta 22184092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 65 - 238
Target Start/End: Original strand, 22984508 - 22984678
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 164  Q
    ||||||||||||||| || | ||||   |||||||| |||||| | ||||||| |||||||||||||| | || |||||||| |||| ||| ||||| ||    
T  22984508 acttttaacctaatttccaactttc---aaaactaaacctaca-catgttaaatctaatcatcagaatcaaaggcttaagaagattgaatgttagtctca 22984603  T
Q  165 cccttaccttagataatcgaaatc-gcagcccttctaggtcctcttcccttttcttgacttttctcctttttctc 238  Q
    ||||||||| |   |||||||||| ||| ||  ||| ||| |||||| ||| ||||||||||||||| |||||||    
T  22984604 cccttacctaaacaaatcgaaatcggcatcctctcttggttctcttctcttctcttgacttttctcccttttctc 22984678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 24049364 - 24049455
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    |||||||||||||| |||||||| |||||||  ||||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||||||    
T  24049364 ttctcaaaaactaaacctacaacatgttaaatataattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttagat 24049455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 40492115 - 40492009
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag-ataatcgaa 185  Q
    ||||| |||| |||||||||| |||||||||  ||||||||| ||||| |||||||| || |||| ||||||||| |||||||||||||| | ||| |||    
T  40492115 ttctctaaaattaatcctaca-cttgttaaatttaatcatcaaaattacagacttaataagattgaatgctagtctcacccttaccttagcaaaattgaa 40492017  T
Q  186 atcgcagc 193  Q
    ||||||||    
T  40492016 atcgcagc 40492009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 13507299 - 13507213
Alignment:
Q  108 acttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcc 194  Q
    ||||||||||  ||||||||||||||| |||||||| || |||| ||||||||| |||||||||||||||  ||  |||||||||||    
T  13507299 acttgttaaatttaatcatcagaattacagacttaataagattgaatgctagtctcacccttaccttagaatatgaaaatcgcagcc 13507213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 13596831 - 13596745
Alignment:
Q  108 acttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcc 194  Q
    ||||||||||  ||||||||||||||| |||||||| || |||| ||||||||| |||||||||||||||  ||  |||||||||||    
T  13596831 acttgttaaatttaatcatcagaattacagacttaataagattgaatgctagtctcacccttaccttagaatatgaaaatcgcagcc 13596745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 19154100 - 19154012
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||||||||||||||||||| |||||||   ||  |||||||| ||| |||||| | ||||| |||||||||||||| ||||||||    
T  19154100 ttctcaaaaactaatcctacaacctgttaaatacaactatcagaatcataaacttaatagaattgaatgctagtcccaccgttacctta 19154012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 14102456 - 14102352
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| |||| ||| | |||  |||||||||| |||||||||  ||||||||||||||| |||||||| || |||| ||||||||| |||||    
T  14102456 tttaacctaattctccaacttcgctaaat-taatcctaca-cttgttaaat-taatcatcagaattacagacttaataagattgaatgctagtctcaccc 14102360  T
Q  168 ttacctta 175  Q
    ||||||||    
T  14102359 ttacctta 14102352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 174
Target Start/End: Original strand, 20404033 - 20404120
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 174  Q
    |||||||||||||| |||||||| |||||||   ||| |||||||| ||||||| ||||  |||| ||| ||||||||||||||||||    
T  20404033 ttctcaaaaactaaacctacaacatgttaaatacaattatcagaatcatagactcaagattattgaatgttagtcccacccttacctt 20404120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 23661266 - 23661349
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    ||||||| ||| |||| ||||||| ||||| |||||||| |||| |||| ||| |||| |||| ||||||||||||||||||||    
T  23661266 aaactaaacctccaacatgttaaatctaattatcagaatcataggcttatgaagattgaatgccagtcccacccttaccttaga 23661349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 204
Target Start/End: Complemental strand, 26222397 - 26222303
Alignment:
Q  109 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtc 204  Q
    |||||||||  ||||||||||||||| |||||||| || |||| ||| ||||| ||||||||||||| |  || ||||||||||||| ||||||||    
T  26222397 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttataagat-gaaatcgcagcccctctaggtc 26222303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 109 - 238
Target Start/End: Original strand, 26220556 - 26220684
Alignment:
Q  109 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtcctct 208  Q
    |||||||||  ||||||||||||||| |||||||| || |||| ||| ||||| ||||||||||||| |  || ||||||||||||| | |||||| ||     
T  26220556 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttataagat-gaaatcgcagcccctttaggtcttc- 26220653  T
Q  209 tcccttttcttgac-ttttctcctttttctc 238  Q
    |||||| ||||| | |||||||| |||||||    
T  26220654 tcccttctcttggctttttctcccttttctc 26220684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 32810448 - 32810538
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||||    
T  32810448 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaga 32810538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 65 - 193
Target Start/End: Complemental strand, 45289872 - 45289744
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaatcc-tacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| |||||||||||| || |||||| ||||||| | |||  | ||||| ||||||||||||  |||| ||| ||||||    
T  45289872 acttttaaccctaattcccaaatt-ctcaaaaactaaaccctacaacatgttaaatccaatttttagaatcatagacttaagattattgaatgttagtcc 45289774  T
Q  163 cacccttaccttagataatcgaaatcgcagc 193  Q
    ||||||||||||| | |||| ||||||||||    
T  45289773 cacccttacctta-acaatcaaaatcgcagc 45289744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 2418082 - 2418003
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| ||| ||||| |||||||||||||||| |  | ||||||||||| ||||||||| |||||||||||||    
T  2418082 aaactaatcctaca-ctttttaaatctaatcatcagaattacat-cataagaaaattgaatgctagtctcacccttacctta 2418003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 1326533 - 1326445
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  1326533 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 1326445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 16412723 - 16412635
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  16412723 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 16412635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 17460272 - 17460208
Alignment:
Q  111 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||| ||||| |||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  17460272 tgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 17460208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 19897268 - 19897356
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  19897268 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 19897356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 20457432 - 20457523
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    |||||||||||||| |||||||| |||||||   |||  |||| || ||||||| ||||  |||| ||| ||||||||||||||||||||||    
T  20457432 ttctcaaaaactaaacctacaacatgttaaatacaattttcaggatcatagactcaagattattgaatgttagtcccacccttaccttagat 20457523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 27471825 - 27471734
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    |||||||||||||| |||||||| |||||||   |||  ||| ||| ||||||| ||||  |||| ||| ||||||||||||||||||||||    
T  27471825 ttctcaaaaactaaacctacaacatgttaaatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttagat 27471734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 32122482 - 32122573
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||| |||||||||||||||||    
T  32122482 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagttccacccttaccttagat 32122573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 238
Target Start/End: Complemental strand, 19807412 - 19807328
Alignment:
Q  157 tagtcccacccttaccttag--ataatcgaaatcg-cagcccttctaggtcctcttcccttttcttgacttttctcctttttctc 238  Q
    |||||||||||||||||||   | ||||||||||| |||||  ||| ||| |||||| ||| |||||||||||||||||||||||    
T  19807412 tagtcccacccttaccttaatcaaaatcgaaatcggcagcctctcttggttctcttctcttctcttgacttttctcctttttctc 19807328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 1485239 - 1485350
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  1485239 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 1485337  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  1485338 cacccttacctta 1485350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 4484117 - 4484228
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  4484117 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 4484215  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  4484216 cacccttacctta 4484228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 11361271 - 11361359
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  | ||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  11361271 ttctcaaaaactaaacctacaacatgttaaatacaatttttagaatcatagactcaagattattgaatgttagtcccacccttacctta 11361359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 14396960 - 14396892
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcc 194  Q
    ||||||| |||| |||||||| |||| ||| ||||||||||||||||||| | |||  |||||||||||    
T  14396960 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaaagaatgaaaatcgcagcc 14396892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 14408769 - 14408658
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  14408769 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 14408671  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  14408670 cacccttacctta 14408658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 14824613 - 14824724
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  14824613 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 14824711  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  14824712 cacccttacctta 14824724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 20045520 - 20045409
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| ||||| |||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  20045520 acttttaaccctaattcccaaattt-tcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 20045422  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  20045421 cacccttacctta 20045409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 21999487 - 21999435
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    ||||||||||||||||||||  | || ||| ||||||||||||||||||||||    
T  21999487 tcagaattatagacttaagatcactgaatgatagtcccacccttaccttagat 21999435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 15202394 - 15202303
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    |||||||||||||| |||||||| | |||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| ||||||||||||||||    
T  15202394 ttctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttaccttagat 15202303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 22418651 - 22418588
Alignment:
Q  111 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 174  Q
    ||||||| |||||||||||||||||   ||||||| ||||| ||| ||||| ||||||||||||    
T  22418651 tgttaaatctaatcatcagaattatcagcttaagagaattgaatgttagtctcacccttacctt 22418588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 22966818 - 22966908
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagac-ttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    ||||| ||||| ||||||||| |||||||||   |||||||||||||||| |  |||| | ||||| ||||||||| |||||||||||||||    
T  22966818 ttctctaaaaccaatcctaca-cttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttaccttaga 22966908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 37609810 - 37609719
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    |||||||||||||| |||||||| |||||||   |||  | ||||| ||||||| ||||  |||| ||| ||||| ||||||||||||||||    
T  37609810 ttctcaaaaactaaacctacaacatgttaaatacaatttttagaatcatagactcaagattattgaatgttagtctcacccttaccttagat 37609719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 21697504 - 21697416
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagac-ttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||| ||||| ||||||||| |||||||||   |||||||||||||||| |  |||| | ||||| ||||||||| |||||||||||||    
T  21697504 ttctctaaaaccaatcctaca-cttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttacctta 21697416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 21966750 - 21966701
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||||||||||||||||  | || ||| |||||||||||||||||||    
T  21966750 tcagaattatagacttaagatcactgaatgatagtcccacccttacctta 21966701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 18677387 - 18677276
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||| ||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  18677387 acttttaaccctaattcccaaatt-ctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 18677289  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  18677288 cacccttacctta 18677276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 20532600 - 20532536
Alignment:
Q  111 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||| |||||||||||||||||   ||||| | ||||| ||| ||||| |||||||||||||    
T  20532600 tgttaaatctaatcatcagaattatcagcttaatagaattgaatgttagtctcacccttacctta 20532536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 21979516 - 21979464
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    ||||||||||||||||||||  | || ||| |||||||||| |||||||||||    
T  21979516 tcagaattatagacttaagatcactgaatgatagtcccacctttaccttagat 21979464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 21983001 - 21982949
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    ||||||||||||||||||||  | || ||| |||||||||||||| |||||||    
T  21983001 tcagaattatagacttaagatcactgaatgatagtcccacccttagcttagat 21982949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 22005126 - 22005074
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    ||||||||||||||| ||||  | || ||| ||||||||||||||||||||||    
T  22005126 tcagaattatagactgaagatcactgaatgatagtcccacccttaccttagat 22005074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 38549221 - 38549133
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| || ||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||| ||||||||||||    
T  38549221 ttctcaaaaactaaacccacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtccaacccttacctta 38549133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 44522228 - 44522176
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    ||||||||||| ||||||||  | || ||| ||||||||||||||||||||||    
T  44522228 tcagaattataaacttaagattactgaatgatagtcccacccttaccttagat 44522176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 41792575 - 41792652
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41792575 cacccttaccttaggtaatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 41792652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 287995 - 288072
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  287995 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 288072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 1101777 - 1101700
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  1101777 cacccttaccttaaataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctccctcttctctg 1101700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 13043781 - 13043704
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  13043781 cacccttaccttagataattgaaatcgcagcccttctaggtcctcttcccttttcttgtcttttctcccttttctctg 13043704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 15279312 - 15279235
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  15279312 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 15279235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 47126040 - 47125963
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  47126040 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 47125963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 15792658 - 15792746
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||| |||| ||||||||||||| ||| |||||||||||||||||||    
T  15792658 ttctcaaaaactaatcctacaacatgttaaatctaatcatcagaatcataggcttaagaaaattgaatgttagtcccacccttacctta 15792746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 55501963 - 55501890
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttc 236  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||    
T  55501963 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttc 55501890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 14699618 - 14699684
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctc 229  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  14699618 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgactcttctc 14699684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 65 - 238
Target Start/End: Original strand, 26790200 - 26790368
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 164  Q
    ||||||||||||||| |  || |||||||||||||| |||||| | ||||||| |||||||||| ||| |||||||||||||||||| ||| ||||| ||    
T  26790200 acttttaacctaatttc--aaattctcaaaaactaaacctaca-catgttaaatctaatcatcaaaatcatagacttaagaaaattgaatgttagtctca 26790296  T
Q  165 cccttacctta-gataatcgaaatc-gcagcccttctaggtcctcttcccttttcttgacttttctcctttttctc 238  Q
    ||||||||||| |||  || ||||| ||||||  ||| |||  ||||||||| ||||||||||||||| |||||||    
T  26790297 cccttaccttatgat--tcaaaatcggcagcctctcttggt--tcttcccttctcttgacttttctcccttttctc 26790368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 53081370 - 53081284
Alignment:
Q  108 acttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcc 194  Q
    ||||||||||  ||||||||||||||| |||||||| || |||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  53081370 acttgttaaatttaatcatcagaattacagacttaataagattgaatgctagtctcacccttaccttagaaaatcgaaatcgcagcc 53081284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 26049708 - 26049619
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 176  Q
    |||||||||||||| |||||||| ||||||| |||||||||| ||| |||| |||||||| |||| ||| ||||||||||||||||||||    
T  26049708 ttctcaaaaactaaccctacaacatgttaaatctaatcatcataatcataggcttaagaagattgaatgttagtcccacccttaccttag 26049619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 27028786 - 27028863
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    |||||||||||||| ||| |||| ||||||||| ||| |||||||||||||||||||||||||||||| |||||||||    
T  27028786 cacccttaccttagttaaccgaagtcgcagcccctcttggtcctcttcccttttcttgacttttctcccttttctctg 27028863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 14852112 - 14852024
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||| ||||||||| |||||||||||||||| |||||||||||||||| || |||||||| |||| ||| |||||| ||||||||||||    
T  14852112 ttctaaaaaactaaccctacaacttgttaaatctaatcatcagaattaaaggcttaagaagattgaatgttagtccaacccttacctta 14852024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 32306240 - 32306152
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| ||||||| |||||||||| ||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  32306240 ttctcaaaaactaaccctacaacatgttaaatctaatcatcaaaatcataggcttaagaagattgaatgttagtcccacccttacctta 32306152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 12841508 - 12841616
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 164  Q
    |||||||||||||||| |||||| ||||||| |||| ||| |||| ||||||| ||||| |||||||| || | |||||||| |||| ||| ||||||||    
T  12841508 acttttaacctaattctccaatt-ctcaaaa-ctaaacctccaacatgttaaatctaattatcagaatcatgggcttaagaagattgaatgttagtccca 12841605  T
Q  165 cccttacctta 175  Q
    |||||||||||    
T  12841606 cccttacctta 12841616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 14825984 - 14826062
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||||||||||||| |||   |||||||| |||||||||| |||||||  || ||||| |||||||||||||    
T  14825984 aaactaatcctacaacttgttaaatcta---atcagaatcatagacttaaaaaaattgagtgttagtctcacccttacctta 14826062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 363127 - 363217
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||||    
T  363127 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaga 363217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 81 - 175
Target Start/End: Complemental strand, 19617489 - 19617395
Alignment:
Q  81 cccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||| |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  19617489 cccaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 19617395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 12611880 - 12611961
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||| ||| |||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| ||||| |||||||||||||    
T  12611880 aaactaaacctccaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtctcacccttacctta 12611961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 23802487 - 23802406
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||| ||| |||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| ||||| |||||||||||||    
T  23802487 aaactaaacctccaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtctcacccttacctta 23802406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 15489557 - 15489469
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||||||||||| ||||  |||| ||| || ||||||||||||||||    
T  15489557 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaattatagactcaagattattgaatgttattcccacccttacctta 15489469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 17334185 - 17334249
Alignment:
Q  111 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||| |||||||||||||||||   ||||||| ||||| ||||||||| |||||||||||||    
T  17334185 tgttaaatctaatcatcagaattatcagcttaagagaattgaatgctagtctcacccttacctta 17334249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 12033096 - 12032985
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 163  Q
    ||||||||||| | | ||||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||    
T  12033096 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtccc 12032997  T
Q  164 acccttacctta 175  Q
    ||||||||||||    
T  12032996 acccttacctta 12032985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 174
Target Start/End: Original strand, 52313508 - 52313595
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 174  Q
    |||||||||||||| |||||||| | |||||   |||  ||||||| ||||||||||||  |||| ||| ||||||||||||||||||    
T  52313508 ttctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagacttaagattattgaatgttagtcccacccttacctt 52313595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 54797952 - 54797886
Alignment:
Q  109 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||  ||||||||||||||| |||||||| || |||| ||| ||||| |||||||||||||    
T  54797952 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 54797886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 226
Target Start/End: Original strand, 14281254 - 14281369
Alignment:
Q  109 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtcctct 208  Q
    |||||||||  ||||||||||||||| | |||||| || |||| ||| ||||| |||||||||| || |  || ||||||||||||| |||||||| ||     
T  14281254 cttgttaaatttaatcatcagaattacatacttaataagattgaatgttagtctcacccttaccatataagat-gaaatcgcagcccctctaggtcttc- 14281351  T
Q  209 tcccttttcttgactttt 226  Q
    |||||| ||||| |||||    
T  14281352 tcccttctcttggctttt 14281369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 3515764 - 3515852
Alignment:
Q  90 tcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    ||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| ||||||||||||||||    
T  3515764 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttaccttagat 3515852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 15117677 - 15117566
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  15117677 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 15117579  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  15117578 cacccttacctta 15117566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 174
Target Start/End: Complemental strand, 51463111 - 51463031
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 174  Q
    ||||||| ||| |||| ||||||| ||||| |||| ||| |||| |||||||| |||| ||| ||||| ||||||||||||    
T  51463111 aaactaaacctccaacatgttaaatctaattatcaaaatcataggcttaagaagattgaatgttagtctcacccttacctt 51463031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 52872490 - 52872402
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| || ||||||||||||||||    
T  52872490 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttaatcccacccttacctta 52872402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 1836843 - 1836734
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 163  Q
    |||||||||| |||||||| |||| |||||||||||  ||||||||| ||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||    
T  1836843 acttttaaccctaattcccaaatt-ctcaaaaactatacctacaact-gttaaatacaattttcagaatgatagactcaagattattgaatgttagtccc 1836746  T
Q  164 acccttacctta 175  Q
    ||||||||||||    
T  1836745 acccttacctta 1836734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 7640511 - 7640400
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 163  Q
    ||||||||||| | | ||||| ||||||||||||||  |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| |    
T  7640511 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctc 7640412  T
Q  164 acccttacctta 175  Q
    ||||||||||||    
T  7640411 acccttacctta 7640400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 176
Target Start/End: Original strand, 14651567 - 14651677
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 164  Q
    ||||||||||||||| ||||| ||||||| |||||| | |||||| ||||||||  |||  ||||||| |||| |||||||  | || |||  |||||||    
T  14651567 acttttaacctaatt-cccaaattctcaagaactaaacatacaacatgttaaagacaattttcagaataatagtcttaagattaatgaatgtaagtccca 14651665  T
Q  165 cccttaccttag 176  Q
    ||||||| ||||    
T  14651666 cccttacgttag 14651677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 184
Target Start/End: Original strand, 16043924 - 16044019
Alignment:
Q  89 ctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcga 184  Q
    ||||||||||||||||| ||| |||||||   |||  ||||||  ||||||||||||  | || ||| ||||| ||||||||||||||| ||||||    
T  16043924 ctcaaaaactaatcctataacatgttaaatacaattttcagaaccatagacttaagattactgcatgttagtctcacccttaccttagaaaatcga 16044019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 19243562 - 19243653
Alignment:
Q  87 ttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||||    
T  19243562 ttctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttaga 19243653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 29268193 - 29268304
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 163  Q
    ||||||||||| | | ||||| | ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||    
T  29268193 acttttaaccttaattcccaaatactcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtccc 29268292  T
Q  164 acccttacctta 175  Q
    ||||||||||||    
T  29268293 acccttacctta 29268304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 238
Target Start/End: Original strand, 3838092 - 3838235
Alignment:
Q  93 aaaactaatcctacaacttgttaaagctaatcatcagaattatagac-ttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgca 191  Q
    ||||| ||||||||| |||||||||   |||||||||||||||| |  |||| | ||||| ||||||||| ||||||||||||| | ||| |||||||||    
T  3838092 aaaaccaatcctaca-cttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttaccttatagaat-gaaatcgca 3838189  T
Q  192 gcccttctaggtcctcttcccttttcttgacttttctcctttttctc 238  Q
     | | |||||||  |  |||||| ||||| ||||||||| |||||||    
T  3838190 actc-tctaggtgtttctcccttctcttggcttttctcccttttctc 3838235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 22354671 - 22354740
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagccct 196  Q
    ||||||| |||| |||||||| |||| ||| ||||||||||||||||||| | ||  ||||||||||||||    
T  22354671 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttata-aagtgaaatcgcagccct 22354740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 171
Target Start/End: Original strand, 3485828 - 3485913
Alignment:
Q  87 ttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttac 171  Q
    ||||||||||||||  |||||||| ||||||| | |||  ||||||| ||||||||||||  |||| ||| ||||| |||||||||    
T  3485828 ttctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcatagacttaagattattgaatgttagtctcacccttac 3485913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 10314597 - 10314630
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagccct 196  Q
    ||||||||||||||||||||||| ||||||||||    
T  10314597 cacccttaccttagataatcgaagtcgcagccct 10314630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 15354935 - 15354846
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaa-tcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   || | |||||||| ||||||| ||||  |||| ||| |||| ||||||||||||||    
T  15354935 ttctcaaaaactaaacctacaacatgttaaaataaaattatcagaatcatagactcaagattattgaatgttagttccacccttacctta 15354846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 39705509 - 39705461
Alignment:
Q  153 atgctagtcccacccttaccttagataatcgaaatcgcagcccttctagg 202  Q
    ||||||||| ||||||||||||| |||||| |||||||||| ||||||||    
T  39705509 atgctagtctcacccttacctta-ataatcaaaatcgcagctcttctagg 39705461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 18214612 - 18214524
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||   |||||| ||||||| ||||  |||| ||| ||||||||| |||||||||    
T  18214612 ttctcaaaaactaaacctacaacatgttaaatacaatttgcagaatcatagactcaagattattgaatgttagtcccacgcttacctta 18214524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 18941 - 18857
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttac 171  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||| |||||||||    
T  18941 ttctcaaaaactaatcctacaacttgttaaatctaatcatcagaattatagacttaagaaaattgaatgttagtctcacccttac 18857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 163374 - 163449
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctc 238  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  163374 cacccttaccttagataatcgaaatcgcagcccttctaggtactcttcccttttcttgacttttctcccttttctc 163449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 95248 - 95359
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  95248 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 95346  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  95347 cacccttacctta 95359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 333206 - 333289
Alignment:
Q  92 aaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  333206 aaaaactaatcctacaacttgttaaatctaatcatcagaattatagacttaagaaaattgaatgttagtctcacccttacctta 333289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 7621 - 7544
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  7621 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 7544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 10075 - 10152
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  10075 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 10152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 93 - 230
Target Start/End: Original strand, 2902 - 3038
Alignment:
Q  93 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcag 192  Q
    ||||||||||||||| |||||||||  ||||||||||||||| |||||||| || |||| ||||||||| |||||||||||||   ||||||||||| ||    
T  2902 aaaactaatcctaca-cttgttaaatttaatcatcagaattaaagacttaataagattgaatgctagtctcacccttaccttaagaaatcgaaatcgaag 3000  T
Q  193 cccttctaggtcctcttcccttttcttgacttttctcc 230  Q
    ||  ||| |||||||||| ||| |||||||||||||||    
T  3001 cctctcttggtcctcttctcttctcttgacttttctcc 3038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 133186 - 133109
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  133186 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 133109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 253773 - 253696
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  253773 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 253696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 5e-29; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 8523835 - 8523912
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  8523835 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 8523912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 16830701 - 16830778
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  16830701 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 16830778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 22593185 - 22593262
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  22593185 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 22593262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 29493658 - 29493735
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  29493658 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 29493735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 89 - 175
Target Start/End: Complemental strand, 23527386 - 23527300
Alignment:
Q  89 ctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||| || ||||||||||||| |||||||||||||||||||||||    
T  23527386 ctcaaaaactaatcctataacatgttaaatctaatcatcagaattacaggcttaagaaaattgaatgctagtcccacccttacctta 23527300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 18697374 - 18697482
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 164  Q
    |||||||||||||||| |||||| ||||||| |||| ||| |||| ||||||| ||||| |||||||| |||| |||||||| |||| ||||||||||||    
T  18697374 acttttaacctaattctccaatt-ctcaaaa-ctaaacctccaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgctagtccca 18697471  T
Q  165 cccttacctta 175  Q
    |||||||||||    
T  18697472 cccttacctta 18697482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 17229152 - 17229055
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcga 184  Q
    |||||||||||||| |||||||| ||||||| ||||| || ||||| |||| |||||||| |||| ||| ||||||||||||||||||||| ||||||    
T  17229152 ttctcaaaaactaaacctacaacatgttaaatctaattattagaatcataggcttaagaagattgaatgttagtcccacccttaccttagaaaatcga 17229055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 18707125 - 18707233
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 164  Q
    |||||||||||||||| |||||| ||||||| |||| ||| |||| ||||||| ||||| |||||||| || | |||||||| |||| ||||||||||||    
T  18707125 acttttaacctaattctccaatt-ctcaaaa-ctaaacctccaacatgttaaatctaattatcagaatcatgggcttaagaagattgaatgctagtccca 18707222  T
Q  165 cccttacctta 175  Q
    |||||||||||    
T  18707223 cccttacctta 18707233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 18895571 - 18895419
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta--gataatcga 184  Q
    ||||||||||||||||||||||||||||||| |||   |||| ||| |||| ||||||||||||| ||| ||||| |||||||||||||   | ||||||    
T  18895571 ttctcaaaaactaatcctacaacttgttaaatcta---atcaaaatcataggcttaagaaaattgaatgttagtctcacccttaccttaatcaaaatcga 18895475  T
Q  185 aatc-gcagcccttctaggtcctcttcccttttcttgacttttc-tcctttttctc 238  Q
    |||| ||||||  | | ||| |||||| ||||| |||||||||| |||||||||||    
T  18895474 aatcagcagcctcttttggttctcttctctttttttgacttttcttcctttttctc 18895419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 22792512 - 22792430
Alignment:
Q  93 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||  ||||||||||||| ||| ||||| |||||||||||||    
T  22792512 aaaactaaacctacaacttgttaaatctaatcatcagaaatataagcttaagaaaattgaatgttagtctcacccttacctta 22792430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 19363330 - 19363480
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaa 186  Q
    ||||| ||||||||||||||||| ||||||| |||||||   |||| |||| ||||||||||||| ||| ||||| |||||||||||||   ||||||||    
T  19363330 ttctccaaaactaatcctacaacatgttaaatctaatca---gaatcataggcttaagaaaattgaatgttagtctcacccttaccttaacaaatcgaaa 19363426  T
Q  187 -tcgcagc-ccttctaggtcctcttcccttttcttgacttttctcctttttctc 238  Q
     || ||||  | ||||||| ||| || ||| ||||||||||||||| |||||||    
T  19363427 ttcacagcttcctctaggttctcctctcttctcttgacttttctcccttttctc 19363480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 18454091 - 18454181
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    |||||||||| ||| |||||||| ||||||| ||||| |||||||| |||  |||||||| |||| ||| |||||||||||||||||||||    
T  18454091 ttctcaaaaattaaacctacaacatgttaaatctaattatcagaatcatatgcttaagaagattgaatgttagtcccacccttaccttaga 18454181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 23539794 - 23539882
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||||||||||||||||||  |||||||   || ||||||||||||| |||||| | ||| | |||||||||||||||||||||||    
T  23539794 ttctcaaaaactaatcctacaatctgttaaatacaaccatcagaattatacacttaatagaatcgaatgctagtcccacccttacctta 23539882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 20137544 - 20137627
Alignment:
Q  93 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 176  Q
    |||||||| |||||||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| ||||||||||||| ||||||    
T  20137544 aaaactaaacctacaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccaccctttccttag 20137627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 22195325 - 22195242
Alignment:
Q  93 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 176  Q
    |||||||| |||||||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| ||||||||||||| ||||||    
T  22195325 aaaactaaacctacaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccaccctttccttag 22195242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 65 - 171
Target Start/End: Original strand, 13612322 - 13612427
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 164  Q
    |||||||||||||||| ||||||  ||||||||||| |||||||| |||||||   ||| |||||||||| ||||||| || |||||  || ||||||||    
T  13612322 acttttaacctaattctccaatta-tcaaaaactaaacctacaacatgttaaatacaattatcagaattacagacttaggagaattgattgttagtccca 13612420  T
Q  165 cccttac 171  Q
    |||||||    
T  13612421 cccttac 13612427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 19024260 - 19024347
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||| ||||| ||||||||| |||||||||  ||||||||||||||| |||||||| | ||||| |||| |||| |||||||||||||    
T  19024260 ttctctaaaaccaatcctaca-cttgttaaacttaatcatcagaattacagacttaatagaattgaatgcaagtctcacccttacctta 19024347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 23077587 - 23077675
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||||||||||||||||||| |||||||   || ||| ||||| | |||||||| | ||||| ||||||||||||| |||||||||    
T  23077587 ttctcaaaaactaatcctacaacatgttaaatacaaccattagaatcacagacttaatagaattgaatgctagtcccactcttacctta 23077675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 23992983 - 23993071
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||||||||||| ||||  |||| ||| |||||||||||||||||||    
T  23992983 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaattatagactcaagattattgaatgttagtcccacccttacctta 23993071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 238
Target Start/End: Original strand, 33443950 - 33444081
Alignment:
Q  111 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta--gataatcgaaatcgcagc-ccttctaggtcctc 207  Q
    ||||||| |||||||||||||||||   ||||||| ||||| ||| ||||| |||||||||||||   | |||||||||||||||  | ||||||| |||    
T  33443950 tgttaaatctaatcatcagaattatcagcttaagagaattgaatgttagtctcacccttaccttaatcaaaatcgaaatcgcagcttcctctaggttctc 33444049  T
Q  208 ttcccttttcttgac-ttttctcctttttctc 238  Q
    ||| ||| ||||||| |||||||| |||||||    
T  33444050 ttctcttctcttgactttttctcccttttctc 33444081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 35012025 - 35012113
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||||||||||||||||||| |||||||   || |||||||||  ||||||||| | ||||| || |||| |||||||||||||||    
T  35012025 ttctcaaaaactaatcctacaacctgttaaatacaaccatcagaatcgtagacttaatagaattgaattctagccccacccttacctta 35012113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 14978624 - 14978543
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||| ||| |||| ||||||| ||||| |||||||| | || |||||||| |||| ||| |||||||||||||||||||    
T  14978624 aaactaaacctccaacatgttaaatctaattatcagaatcacaggcttaagaagattgaatgttagtcccacccttacctta 14978543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 226
Target Start/End: Complemental strand, 19102528 - 19102413
Alignment:
Q  109 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtcctct 208  Q
    |||||||||  |||||||||||||||  ||||||| || |||| ||| ||||| ||||||||||||| |  || ||||||||||||| |||||||| ||     
T  19102528 cttgttaaatttaatcatcagaattactgacttaataagattgaatgttagtctcacccttaccttataagat-gaaatcgcagcccctctaggtcttc- 19102431  T
Q  209 tcccttttcttgactttt 226  Q
    |||||| ||||| |||||    
T  19102430 tcccttctcttggctttt 19102413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 106 - 175
Target Start/End: Complemental strand, 20556103 - 20556034
Alignment:
Q  106 caacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||| ||||||| |||||||||||||| ||||   ||||||||||| ||| |||||||||||||||||||    
T  20556103 caacatgttaaatctaatcatcagaatcataggtgtaagaaaattgaatgttagtcccacccttacctta 20556034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 25618981 - 25618900
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||| ||| |||| ||||||| ||||| |||||||| | || |||||||| |||| ||| |||||||||||||||||||    
T  25618981 aaactaaacctccaacatgttaaatctaattatcagaatcacaggcttaagaagattgaatgttagtcccacccttacctta 25618900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 17027952 - 17027864
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  17027952 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 17027864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 18231684 - 18231780
Alignment:
Q  140 ttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcg-cagcccttctaggtcctcttcccttttcttgacttttctccttttt 235  Q
    |||||||||||| ||| ||| | |||||||||||||   ||||||||||| |||||  ||| |||||||||| ||| || |||||||||||||||||    
T  18231684 ttaagaaaattgaatgttagcctcacccttaccttaacaaatcgaaatcggcagcctctcttggtcctcttctcttctcatgacttttctccttttt 18231780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 25535969 - 25536057
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  25535969 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 25536057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 25689387 - 25689475
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  25689387 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 25689475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 25721059 - 25721147
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  25721059 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 25721147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 25753402 - 25753490
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  25753402 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 25753490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 25755572 - 25755660
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  25755572 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 25755660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 34963934 - 34964022
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  34963934 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 34964022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 204
Target Start/End: Complemental strand, 3851062 - 3850968
Alignment:
Q  109 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtc 204  Q
    |||||||||  |||||||||||||||  ||||||| || |||| ||| ||||| ||||||||||||| |  || ||||||||||||| ||||||||    
T  3851062 cttgttaaatttaatcatcagaattacggacttaataagattgaatgttagtctcacccttaccttataagat-gaaatcgcagcccctctaggtc 3850968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 8055868 - 8055978
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 163  Q
    |||||||||| |||||||| |||| |||||||||||| |||||||| |||||||   |||  || |||| ||||||| ||||  |||| ||| |||||||    
T  8055868 acttttaaccctaattcccaaatt-ctcaaaaactaaacctacaacatgttaaatacaattttcggaatcatagactcaagattattgaatgttagtccc 8055966  T
Q  164 acccttacctta 175  Q
    ||||||||||||    
T  8055967 acccttacctta 8055978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 12743157 - 12743268
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 163  Q
    ||||||||||| | | ||||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||    
T  12743157 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtccc 12743256  T
Q  164 acccttacctta 175  Q
    ||||||||||||    
T  12743257 acccttacctta 12743268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 17882820 - 17882710
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 163  Q
    |||||||||| |||||||| |||| |||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| |    
T  17882820 acttttaaccctaattcccaaatt-ctcaaaaactaaacctacaacatgttaaatgcaattttcagaatcatagactcaagattattgaatgttagtctc 17882722  T
Q  164 acccttacctta 175  Q
    ||||||||||||    
T  17882721 acccttacctta 17882710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 31629949 - 31629858
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| ||||||||||||||||    
T  31629949 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttaccttagat 31629858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 16447820 - 16447754
Alignment:
Q  109 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||  ||||||||||||||| |||||||| || |||| ||| ||||| |||||||||||||    
T  16447820 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 16447754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 29483618 - 29483557
Alignment:
Q  1 aacaattaatcacaagctagaacaagaagaaaaatgattatgagaataagtatctaaccccct 63  Q
    ||||||| |||| |||||||||||| ||||||| ||||||||||||||| |||| ||||||||    
T  29483618 aacaattgatcataagctagaacaa-aagaaaagtgattatgagaataactatccaaccccct 29483557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 18198675 - 18198611
Alignment:
Q  82 ccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaa 147  Q
    |||||||||| ||| |||||||||| |||||||||| |||| ||||| ||||||| ||||||||||    
T  18198675 ccaatttctccaaacctaatcctac-acttgttaaatctaagcatcataattatacacttaagaaa 18198611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 21119872 - 21119807
Alignment:
Q  109 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 174  Q
    |||||||||  ||||||||||||||| |||||||| || |||| ||| ||||| ||||||||||||    
T  21119872 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctt 21119807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 16198359 - 16198447
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| |||||||||||||    
T  16198359 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcacacccttacctta 16198447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 17201129 - 17201077
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    ||||||| |||| |||||||| |||| ||| ||||||||||||||||||||||    
T  17201129 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttagat 17201077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 18333917 - 18333806
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  18333917 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 18333819  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  18333818 cacccttacctta 18333806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 22783065 - 22783176
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||    
T  22783065 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcc 22783163  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  22783164 cacccttacctta 22783176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 24423384 - 24423495
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  24423384 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 24423482  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  24423483 cacccttacctta 24423495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 30676127 - 30676039
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| |||||||||||||    
T  30676127 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgcatgttagtctcacccttacctta 30676039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 33865115 - 33865226
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  33865115 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 33865213  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  33865214 cacccttacctta 33865226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 174
Target Start/End: Original strand, 1598995 - 1599082
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 174  Q
    ||||||||||||||  ||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||    
T  1598995 ttctcaaaaactaaatctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 1599082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 175
Target Start/End: Original strand, 18343044 - 18343139
Alignment:
Q  81 cccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||    
T  18343044 cccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttacctta 18343139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 23531945 - 23531894
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    ||||||| |||| |||||||| |||| ||| |||||||||||||||||||||    
T  23531945 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaga 23531894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 8226789 - 8226740
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  8226789 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 8226740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 15540182 - 15540215
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagccct 196  Q
    ||||||||||||||||||||||| ||||||||||    
T  15540182 cacccttaccttagataatcgaagtcgcagccct 15540215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 15684692 - 15684643
Alignment:
Q  14 aagctagaacaagaagaaaaatgattatgagaataagtatctaaccccct 63  Q
    |||||||| ||| ||||||| || ||||||||||||||||| ||||||||    
T  15684692 aagctagatcaaaaagaaaattgtttatgagaataagtatccaaccccct 15684643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 15685317 - 15685284
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagccct 196  Q
    ||||||||||||||||||||||| ||||||||||    
T  15685317 cacccttaccttagataatcgaagtcgcagccct 15685284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 18914879 - 18914966
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||| | ||||  |||| ||| |||||||||||||||||||    
T  18914879 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcataga-tcaagattattgaatgttagtcccacccttacctta 18914966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 25739324 - 25739376
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    ||||||| ||||||||||||  | || ||| ||||||||||||||||||||||    
T  25739324 tcagaatcatagacttaagatcactgaatgatagtcccacccttaccttagat 25739376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 26923770 - 26923659
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  26923770 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaattcaattttcagaatcaatgacttaagattattgaatgttagtcc 26923672  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  26923671 cacccttacctta 26923659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 5e-29; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 4398612 - 4398689
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  4398612 cacccttaccttagataatcgaaatcgcagcccttcttggtgctcttcccttttcttgacttttctcccttttctctg 4398689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 16255152 - 16255075
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  16255152 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 16255075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 16258785 - 16258708
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  16258785 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 16258708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 22592504 - 22592427
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  22592504 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 22592427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 22596059 - 22595982
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  22596059 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 22595982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 22881090 - 22881167
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  22881090 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 22881167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 29324437 - 29324360
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  29324437 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 29324360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 26496788 - 26496864
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctct 239  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  26496788 cacccttaccttaggtaatcgaaatcgcagcccttctaggttctcttcccttttcttgacttttctcccttttctct 26496864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 22588949 - 22588872
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    |||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  22588949 cacccttaccttagataatcaaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 22588872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 98 - 238
Target Start/End: Complemental strand, 22177423 - 22177282
Alignment:
Q  98 taatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt-agataatcgaaatcgcagccct 196  Q
    |||||||||| |||||||||  ||||||||||||||| |||||||| || |||| ||||||||| |||||||||||| | | ||||||||||||||||      
T  22177423 taatcctaca-cttgttaaatttaatcatcagaattacagacttaataagattgaatgctagtctcacccttaccttaacaaaatcgaaatcgcagcctc 22177325  T
Q  197 tctaggtcctcttcccttttcttgac-ttttctcctttttctc 238  Q
    ||| |||||||||| ||| ||||||| |||||||| |||||||    
T  22177324 tcttggtcctcttctcttctcttgactttttctcccttttctc 22177282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 26360322 - 26360244
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttccc-ttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | |||||||||    
T  26360322 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttccctttttcttgacttttcttccttttctctg 26360244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 25744603 - 25744679
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagactta 142  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||||||||||| |||||||||||||||||| |||||    
T  25744603 acttttaacctaattccc-aatttctcaaaaactcatcatacaacttgttaaatctaatcatcagaattatacactta 25744679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 93 - 193
Target Start/End: Complemental strand, 26739879 - 26739779
Alignment:
Q  93 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcag 192  Q
    |||||||| ||||||||||||||||  ||||||||||||||| |||||||||| ||||| ||| ||||| |||||||||||||   |||| |||||||||    
T  26739879 aaaactaaacctacaacttgttaaatttaatcatcagaattacagacttaagagaattgaatgttagtctcacccttaccttaacaaatcaaaatcgcag 26739780  T
Q  193 c 193  Q
    |    
T  26739779 c 26739779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 23470660 - 23470745
Alignment:
Q  91 caaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 176  Q
    |||||||||| |||||||| ||||||| |||||||||||||| |||| |||||||| |||| ||| || |||||||||||||||||    
T  23470660 caaaaactaaccctacaacatgttaaatctaatcatcagaatcataggcttaagaagattgaatgttattcccacccttaccttag 23470745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 65 - 238
Target Start/End: Original strand, 20572706 - 20572876
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 164  Q
    ||||||||||||||| || | ||||   |||||||| |||||| | ||||||| |||||||||||||| |||| ||||  ||||||| ||| ||||| ||    
T  20572706 acttttaacctaatttccaactttc---aaaactaaacctaca-catgttaaatctaatcatcagaatcataggcttaccaaaattgaatgttagtctca 20572801  T
Q  165 cccttaccttagataatcgaaatc-gcagcccttctaggtcctcttcccttttcttgacttttctcctttttctc 238  Q
    |||||||||||   ||| |||||| ||||||  ||| ||| |||||| ||| ||||||||||||||| |||||||    
T  20572802 cccttaccttaagaaattgaaatcggcagcctctcttggttctcttctcttctcttgacttttctcccttttctc 20572876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 113 - 238
Target Start/End: Complemental strand, 21327485 - 21327360
Alignment:
Q  113 ttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatc-gcagccct-tctaggtcctcttc 210  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| ||||| ||| |||||||||   |||||||||| |||||  | |||||||  || ||    
T  21327485 ttaaatctaatcatcagaattatagacttaagaaaattgaatgttagtctcactcttaccttaacaaatcgaaatcggcagctttctctaggt--tcctc 21327388  T
Q  211 ccttttcttgacttttctcctttttctc 238  Q
    |||| ||||||||||||||| |||||||    
T  21327387 ccttctcttgacttttctcccttttctc 21327360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 23476373 - 23476457
Alignment:
Q  92 aaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 176  Q
    ||||||||| |||||||| ||||||| |||||||| ||||| |||| |||||||| |||| ||| ||||||||||||||||||||    
T  23476373 aaaaactaaccctacaacatgttaaatctaatcattagaatcataggcttaagaagattgaatgttagtcccacccttaccttag 23476457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 25573665 - 25573581
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttac 171  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||| ||||  ||||||| |||| ||| |||||||||||||||    
T  25573665 ttctcaaaaactaaccctacaacatgttaaatctaatcatcagaatcataggattaagaagattgaatgttagtcccacccttac 25573581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 25576093 - 25576010
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccctta 170  Q
    |||||||||||||| |||||||| ||||||| ||| |||||||||| |||| |||||||| |||| ||| ||||||||||||||    
T  25576093 ttctcaaaaactaaccctacaacatgttaaatctattcatcagaatcataggcttaagaagattgaatgttagtcccaccctta 25576010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 14048931 - 14049040
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 164  Q
    |||||||||||||||| ||||||| ||||||||||| |||||||| |||||||   ||| |||||||||| || ||||||| |||||  || || |||||    
T  14048931 acttttaacctaattctccaattt-tcaaaaactaaacctacaacatgttaaatacaattatcagaattacaggcttaagagaattgattgttaatccca 14049029  T
Q  165 cccttacctta 175  Q
    |||||||||||    
T  14049030 cccttacctta 14049040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 36315409 - 36315498
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    ||||| ||||| ||||||||| |||||||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||||||||||||    
T  36315409 ttctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttaccttaga 36315498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 67 - 177
Target Start/End: Complemental strand, 41094925 - 41094816
Alignment:
Q  67 ttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacc 166  Q
    |||||||||||||| |||||| |||||||||||| |||||||| |||||||   ||| |||||||||| || ||||||| |||||  || ||||| ||||    
T  41094925 ttttaacctaattctccaatt-ctcaaaaactaaacctacaacatgttaaatacaattatcagaattacaggcttaagagaattgattgttagtctcacc 41094827  T
Q  167 cttaccttaga 177  Q
    |||||||||||    
T  41094826 cttaccttaga 41094816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 26732066 - 26731989
Alignment:
Q  93 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccctta 170  Q
    |||||||| ||||||||||||||||  ||||||||||||||| |||||||||| ||||| ||| ||||| ||||||||    
T  26732066 aaaactaaacctacaacttgttaaatttaatcatcagaattacagacttaagagaattgaatgttagtctcaccctta 26731989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 15797305 - 15797393
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||||||||| ||||||||| |||||||   ||  |||||||||| || |||||||||||||  ||||||||||||||||||||||    
T  15797305 ttctcaaaaactagtcctacaacatgttaaatacaactatcagaattagaggcttaagaaaattgagtgctagtcccacccttacctta 15797393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 25574900 - 25574817
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccctta 170  Q
    |||||||||||||| |||||||| ||||||| ||| |||||||||  |||| |||||||| |||| ||| ||||||||||||||    
T  25574900 ttctcaaaaactaaccctacaacatgttaaatctattcatcagaaccataggcttaagaagattgaatgttagtcccaccctta 25574817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 27988181 - 27988086
Alignment:
Q  98 taatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag-ataatcgaaatcgcagc 193  Q
    |||||||||| |||||||||  ||| ||||||||||| |||||||| | ||||| ||| ||||| |||||||||||||| | |||||||||||||||    
T  27988181 taatcctaca-cttgttaaatttaaccatcagaattacagacttaatagaattgaatgttagtctcacccttaccttagaaaaatcgaaatcgcagc 27988086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 22413056 - 22413137
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||| ||| |||| ||||||| ||||| |||||||| |||| ||||| || |||| ||| |||||||||||||||||||    
T  22413056 aaactaaacctccaacatgttaaatctaattatcagaatcataggcttaaaaagattgaatgttagtcccacccttacctta 22413137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 2154040 - 2153952
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  2154040 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 2153952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 29330727 - 29330815
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  29330727 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 29330815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 175
Target Start/End: Complemental strand, 40723555 - 40723460
Alignment:
Q  81 cccaatttctcaaaaacta-atcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||| ||||||||||||| | || ||||| |||||||  |||| |||| ||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  40723555 cccaaattctcaaaaactataaccaacaacatgttaaatttaattatcaaaatcataggcttaagaagattgaatgttagtcccacccttacctta 40723460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 18318250 - 18318184
Alignment:
Q  109 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||  ||||||||||||||| |||||||| || |||| ||| ||||| |||||||||||||    
T  18318250 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 18318184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 175
Target Start/End: Original strand, 23065370 - 23065464
Alignment:
Q  82 ccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||    
T  23065370 ccaatttctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttacctta 23065464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 41860669 - 41860580
Alignment:
Q  87 ttctcaaaaacta-atcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 176  Q
    ||||||||||||| | |||||||| | ||||| ||||| |||| ||| |||| |||||||| |||| ||| ||||||||||||||||||||    
T  41860669 ttctcaaaaactataacctacaacat-ttaaatctaattatcaaaatcataggcttaagaagattgaatgttagtcccacccttaccttag 41860580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 17516378 - 17516290
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||| ||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  17516378 ttctcaaaaaataaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 17516290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 24473828 - 24473916
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| |||||||||||||    
T  24473828 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 24473916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 20917255 - 20917168
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 174  Q
    |||||||||||||| |||||||| | |||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||    
T  20917255 ttctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 20917168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 175
Target Start/End: Original strand, 39245989 - 39246084
Alignment:
Q  81 cccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||    
T  39245989 cccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttacctta 39246084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 20765296 - 20765230
Alignment:
Q  109 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||  ||||||||||||||| |||||||| || |||| ||  ||||| |||||||||||||    
T  20765296 cttgttaaatttaatcatcagaattacagacttaataagattgaattttagtctcacccttacctta 20765230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 40726683 - 40726752
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagccct 196  Q
    ||||||| |||| |||||||| |||| ||| ||||||||||||||||||| | ||  ||||||||||||||    
T  40726683 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttata-aagtgaaatcgcagccct 40726752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 23669265 - 23669298
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagccct 196  Q
    ||||||||||||||||||||||| ||||||||||    
T  23669265 cacccttaccttagataatcgaagtcgcagccct 23669298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 23694360 - 23694393
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagccct 196  Q
    ||||||||||||||||||||||| ||||||||||    
T  23694360 cacccttaccttagataatcgaagtcgcagccct 23694393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 177
Target Start/End: Original strand, 31062187 - 31062295
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 164  Q
    ||||||||||||||||  ||| ||||| ||||||||  || |||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| ||  | ||    
T  31062187 acttttaacctaattcttcaa-ttctc-aaaactaaatctccaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgtta--ctca 31062282  T
Q  165 cccttaccttaga 177  Q
    |||||||||||||    
T  31062283 cccttaccttaga 31062295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 18419454 - 18419506
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    ||||||| |||| |||||||| |||| ||| |||||||||| |||||||||||    
T  18419454 tcagaatcataggcttaagaagattgaatgttagtcccacctttaccttagat 18419506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 29346818 - 29346929
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||| ||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  29346818 acttttaaccctaattcccaaatt-ctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 29346916  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  29346917 cacccttacctta 29346929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 29349291 - 29349402
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||| ||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  29349291 acttttaaccctaattcccaaatt-ctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 29349389  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  29349390 cacccttacctta 29349402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 29351764 - 29351875
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||| ||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  29351764 acttttaaccctaattcccaaatt-ctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 29351862  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  29351863 cacccttacctta 29351875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 5e-29; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 2037705 - 2037628
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  2037705 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 2037628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 2041446 - 2041369
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  2041446 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 2041369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 10988824 - 10988747
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  10988824 cacccttaccttcgataatcgaaatcgcaacccttctaggtcctcttcccttttcttgacttttctcccttttctctg 10988747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 14039082 - 14039159
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  14039082 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 14039159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 14042550 - 14042627
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  14042550 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 14042627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 39231629 - 39231706
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  39231629 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 39231706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 43927952 - 43928076
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| | |||| ||||| |||||||||||||||||||||||   || ||||||||||| |||||||| || |||| ||||||||| |||||    
T  43927952 tttaacctaattctcaaatt-ctcaataactaatcctacaacttgttaaatacaaccatcagaattacagacttaataagattgaatgctagtctcaccc 43928050  T
Q  168 ttaccttagataatcgaaatcgcagc 193  Q
    |||||||||| |||||||||||||||    
T  43928051 ttaccttagaaaatcgaaatcgcagc 43928076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 54974288 - 54974365
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  54974288 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 54974365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 54976898 - 54976975
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  54976898 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 54976975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 54979508 - 54979585
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  54979508 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 54979585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 2034198 - 2034121
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||  ||||||||    
T  2034198 cacccttaccttagataatcgaaatcgcagcccttcctggttctcttcccttttcttgacttttctcccctttctctg 2034121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 602856 - 602779
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    |||||||||||||| |||||||| ||||| ||| ||| |||||||||||||||||||||||||||||| |||||||||    
T  602856 cacccttaccttagttaatcgaagtcgcaacccctcttggtcctcttcccttttcttgacttttctcccttttctctg 602779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 7633269 - 7633345
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctct 239  Q
    |||||||||| ||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  7633269 cacccttaccatagttaatcgaagtcgcagcccctcttggtcctcttcccttttcttgacttttctcccttttctct 7633345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 9578509 - 9578597
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||| ||||||||| |||||||| ||||||| |||||||||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  9578509 ttctaaaaaactaaccctacaacatgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 9578597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 325025 - 325130
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| |||||| ||||||| |||| ||| |||| ||||||| ||||| |||||||| |||| |||||||| |||| |||||||||||||||    
T  325025 tttaacctaattctccaatt-ctcaaaa-ctaaacctccaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgctagtcccaccc 325122  T
Q  168 ttacctta 175  Q
    ||||||||    
T  325123 ttacctta 325130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 12386275 - 12386381
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| | |||| ||||||||||||||||||||| |||||||   || ||||| ||| |||||||||| | ||||| |||||||||||||||    
T  12386275 tttaacctaattctcaaatt-ctcaaaaactaatcctacaacgtgttaaatacaaccatcaaaatcatagacttaatagaattgaatgctagtcccaccc 12386373  T
Q  168 ttacctta 175  Q
    ||||||||    
T  12386374 ttacctta 12386381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 15207805 - 15207887
Alignment:
Q  93 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||| |||||||||||||||| ||||||||||||||||||   |||||||||||| ||| ||||| |||||||||||||    
T  15207805 aaaactaaacctacaacttgttaaatctaatcatcagaattataagtttaagaaaattgaatgttagtctcacccttacctta 15207887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 81 - 177
Target Start/End: Original strand, 19039459 - 19039554
Alignment:
Q  81 cccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    ||||| ||||| |||||  |||||||| ||||||||| |||||||||||||||| |||||||| | ||||| ||||||||| |||||||||||||||    
T  19039459 cccaaattctctaaaacccatcctaca-cttgttaaatctaatcatcagaattacagacttaatagaattgaatgctagtctcacccttaccttaga 19039554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 111 - 238
Target Start/End: Original strand, 13919756 - 13919886
Alignment:
Q  111 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt--agataatcgaaatcgcagc-ccttctaggtcctc 207  Q
    ||||||| |||||||||||||||||   ||||||| ||||| ||| ||||| ||||||||||||  | | |||||||||||||||  | ||||||| |||    
T  13919756 tgttaaatctaatcatcagaattatcagcttaagagaattgaatgttagtctcacccttaccttaaaaaaaatcgaaatcgcagcttcctctaggttctc 13919855  T
Q  208 ttcccttttcttgacttttctcctttttctc 238  Q
    ||| ||| ||||||||||||||| |||||||    
T  13919856 ttctcttctcttgacttttctcccttttctc 13919886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 32402268 - 32402181
Alignment:
Q  89 ctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 176  Q
    |||||||||||| ||||| || ||||||| |||||||||||||||| |  ||||||| ||||| ||| ||||||||||||||||||||    
T  32402268 ctcaaaaactaaacctacgacatgttaaatctaatcatcagaattacaagcttaagagaattgaatgttagtcccacccttaccttag 32402181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 15009373 - 15009299
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttct 237  Q
    |||||||||||||| |||||||| ||||| ||| ||| ||||||||||||||||||| |||||||||| ||||||    
T  15009373 cacccttaccttagttaatcgaagtcgcaacccctcttggtcctcttcccttttctttacttttctcccttttct 15009299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 67 - 177
Target Start/End: Original strand, 44495482 - 44495590
Alignment:
Q  67 ttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacc 166  Q
    |||||||||||||| |||||| ||||||| |||| ||| |||  ||||||| ||||| |||| ||| ||||||||||||| |||| ||| ||||||||||    
T  44495482 ttttaacctaattctccaatt-ctcaaaa-ctaaacctccaatatgttaaatctaattatcataatcatagacttaagaagattgaatgttagtcccacc 44495579  T
Q  167 cttaccttaga 177  Q
    |||||||||||    
T  44495580 cttaccttaga 44495590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 99 - 194
Target Start/End: Original strand, 23275541 - 23275635
Alignment:
Q  99 aatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcc 194  Q
    ||||||||| |||||||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||||||||||||  ||  |||||||||||    
T  23275541 aatcctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttaccttagaatatgaaaatcgcagcc 23275635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 93 - 151
Target Start/End: Original strand, 15266050 - 15266108
Alignment:
Q  93 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattg 151  Q
    |||||||| |||||||||||||||| ||||||||||||||||||  |||||||||||||    
T  15266050 aaaactaaacctacaacttgttaaatctaatcatcagaattataagcttaagaaaattg 15266108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 17738145 - 17738234
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    ||||| ||||| ||||||||| ||| |||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||||||||||||    
T  17738145 ttctctaaaaccaatcctaca-cttattaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttaccttaga 17738234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 11202209 - 11202273
Alignment:
Q  111 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||| ||||| |||||||| ||||||||||||| |||| ||||||||| |||||||||||||    
T  11202209 tgttaaatctaattatcagaatcatagacttaagaagattgaatgctagtctcacccttacctta 11202273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 171
Target Start/End: Original strand, 28195495 - 28195578
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttac 171  Q
    ||||| ||||| ||||||||| |||||||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||||||    
T  28195495 ttctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttac 28195578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 21838320 - 21838425
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| |||| | ||| |||| |||| ||||| |||||||||  ||||||||||||||| ||||| || | ||||| ||||||||| |||||    
T  21838320 tttaacctaattctccaact-ctctaaaattaattctaca-cttgttaaatttaatcatcagaattacagactcaatataattgaatgctagtctcaccc 21838417  T
Q  168 ttacctta 175  Q
    ||||||||    
T  21838418 ttacctta 21838425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 13522251 - 13522193
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcga 184  Q
    ||||||| |||| |||||||| |||| |||||||||||||||||||||||| |||||||    
T  13522251 tcagaatcataggcttaagaagattgaatgctagtcccacccttaccttagttaatcga 13522193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 12119273 - 12119184
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 176  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||||    
T  12119273 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttag 12119184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 10557692 - 10557779
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||| ||||| |||||||||  ||||||||  ||||||||||||||| |||||||| | ||||| ||||| ||| |||||||||||||    
T  10557692 ttctctaaaaccaatcctacag-ttgttaaatttaatcatcagaattacagacttaatagaattgaatgctggtctcacccttacctta 10557779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 24514237 - 24514325
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  24514237 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 24514325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 605603 - 605502
Alignment:
Q  93 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcag 192  Q
    ||||| ||||||||| ||||||||| |||||||||| | ||||| | |||| | ||||  ||||||||| ||||||||||||||| ||  ||||||||||    
T  605603 aaaaccaatcctaca-cttgttaaatctaatcatcatagttatatagttaatagaattaaatgctagtctcacccttaccttaga-aagtgaaatcgcag 605506  T
Q  193 ccct 196  Q
    ||||    
T  605505 ccct 605502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 13937382 - 13937295
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 174  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||    
T  13937382 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 13937295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 37250369 - 37250268
Alignment:
Q  124 catcagaattatag-acttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgac 222  Q
    |||||||||||||  |||||| | ||||| ||| ||||| ||||||||||||||| ||| ||||||||||| | |||||||| ||||||||| ||||| |    
T  37250369 catcagaattatactacttaatagaattgaatgttagtctcacccttaccttaga-aattgaaatcgcagctc-tctaggtcttcttcccttctcttggc 37250272  T
Q  223 tttt 226  Q
    ||||    
T  37250271 tttt 37250268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 174
Target Start/End: Original strand, 41124693 - 41124780
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 174  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||    
T  41124693 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 41124780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 45219467 - 45219412
Alignment:
Q  120 taatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||||||||||| |||||||| || |||| ||||||||| |||||||||||||    
T  45219467 taatcatcagaattacagacttaataagattgaatgctagtctcacccttacctta 45219412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 175
Target Start/End: Original strand, 21619386 - 21619452
Alignment:
Q  109 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||  ||||||||||||||| |||||||| || |||| ||| ||||| |||||||||||||    
T  21619386 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 21619452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 175
Target Start/End: Complemental strand, 24152455 - 24152386
Alignment:
Q  106 caacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||| ||||||| ||||| |||||||| |||| |||| ||| |||| ||| |||||||||||||||||||    
T  24152455 caacatgttaaatctaattatcagaatcataggcttaggaagattgaatgttagtcccacccttacctta 24152386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 36167535 - 36167662
Alignment:
Q  109 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtcctct 208  Q
    |||||||||  |||||||||| |||| |||||||| || |||| ||| ||||| ||||||||||||| | |||| ||||||||| | | ||||||| | |    
T  36167535 cttgttaaatttaatcatcaggattacagacttaataagattgaatgttagtctcacccttacctta-acaatcaaaatcgcag-cttcctaggtctttt 36167632  T
Q  209 tcccttttcttga-cttttctcctttttct 237  Q
    || ||| |||||| ||||||||| ||||||    
T  36167633 tctcttctcttgaccttttctcccttttct 36167662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 17464015 - 17464126
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  17464015 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 17464113  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  17464114 cacccttacctta 17464126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 20629600 - 20629512
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||  |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  20629600 ttctcaaaaactaaacctacaatatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 20629512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 34160163 - 34160274
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  34160163 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 34160261  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  34160262 cacccttacctta 34160274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 53300879 - 53300808
Alignment:
Q  121 aatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagc 193  Q
    |||||||||||||| |||||||| | ||||| ||||||||| ||| ||||||||| | |||| ||||||||||    
T  53300879 aatcatcagaattacagacttaatagaattgaatgctagtctcactcttacctta-acaatcaaaatcgcagc 53300808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 55318712 - 55318624
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| | |||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  55318712 ttctcaaaaactaaacttacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 55318624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 175
Target Start/End: Complemental strand, 6468443 - 6468348
Alignment:
Q  81 cccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||| ||||||||||||||  |||||||| ||||||| |||||  ||||||| |  |||||||||  |||| ||| || ||||||||||||||||    
T  6468443 cccaaattctcaaaaactaaaacctacaacatgttaaatctaattttcagaatcaatgacttaagattattgaatgttactcccacccttacctta 6468348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 13151113 - 13151002
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 163  Q
    ||||||||||| | | ||||| ||||||||||||||  |||||||| ||||||| | |||  |||||||    |||||||||  |||| ||| |||||||    
T  13151113 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcgatgacttaagattattgaatgttagtccc 13151014  T
Q  164 acccttacctta 175  Q
    ||||||||||||    
T  13151013 acccttacctta 13151002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 13153581 - 13153470
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 163  Q
    ||||||||||| | | ||||| ||||||||||||||  |||||||| ||||||| | |||  |||||||    |||||||||  |||| ||| |||||||    
T  13153581 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcgatgacttaagattattgaatgttagtccc 13153482  T
Q  164 acccttacctta 175  Q
    ||||||||||||    
T  13153481 acccttacctta 13153470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 17444171 - 17444084
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 174  Q
    |||||||||||||| |||||||| | |||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||    
T  17444171 ttctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 17444084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 229
Target Start/End: Complemental strand, 17684854 - 17684779
Alignment:
Q  156 ctagtcccacccttacctt-agataatcgaaatcgcag-cccttctaggtcctcttcccttttcttgacttttctc 229  Q
    ||||||||||||||||||| ||| |||||| ||||||| | ||||||||| ||| || ||| ||||||||||||||    
T  17684854 ctagtcccacccttaccttaagaaaatcgatatcgcagactcttctaggttctcctctcttctcttgacttttctc 17684779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 22146817 - 22146766
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    ||||||| |||| |||||||| |||| ||| |||||||||||||||||||||    
T  22146817 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaga 22146766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 5224325 - 5224394
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagccct 196  Q
    ||||||| |||| |||||||| |||| ||| ||||||||||||||||||| |||  | |||||||||||||    
T  5224325 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta-atacacaaaatcgcagccct 5224394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 175
Target Start/End: Complemental strand, 10247030 - 10246936
Alignment:
Q  82 ccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||    
T  10247030 ccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttacctta 10246936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 37641553 - 37641503
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 176  Q
    ||||||| |||| |||||||| |||| ||| ||||||||||||||||||||    
T  37641553 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttag 37641503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 50243782 - 50243863
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||| ||| |||| ||||||| ||||| || ||||| | || |||||||| |||| ||| ||||| |||||||||||||    
T  50243782 aaactaaacctccaacatgttaaatctaattatgagaatcacaggcttaagaagattgaatgttagtctcacccttacctta 50243863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 10379893 - 10379981
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||||||||||  ||||||| | |||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  10379893 ttctcaaaaactaaatctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 10379981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 15978372 - 15978483
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||| ||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  15978372 acttttaaccctaattcccaaatt-ctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 15978470  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  15978471 cacccttacctta 15978483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 16828330 - 16828278
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    ||||||| ||||||||||||  | || ||| ||||||||||||||||||||||    
T  16828330 tcagaatcatagacttaagatcactgaatgatagtcccacccttaccttagat 16828278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 22109531 - 22109464
Alignment:
Q  125 atcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagc 193  Q
    |||||||||| |||||||| | ||||| | | ||||| ||||||||||||||| |||| ||||||||||    
T  22109531 atcagaattacagacttaatataattgtaagttagtctcacccttaccttaga-aatcaaaatcgcagc 22109464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 230
Target Start/End: Complemental strand, 23317973 - 23317881
Alignment:
Q  139 cttaagaaaattggatgctagtcccacccttaccttagataatcgaaatc-gcagcccttctaggtcctcttcccttttcttgacttttctcc 230  Q
    ||||||| ||||| ||| ||||| |||||||||||||   |||||||||| | ||||  ||| ||| |||||| ||| |||||||||||||||    
T  23317973 cttaagagaattgaatgttagtctcacccttaccttaacaaatcgaaatcggaagcctctcttggttctcttctcttctcttgacttttctcc 23317881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 55477329 - 55477440
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||     
T  55477329 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtct 55477427  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  55477428 cacccttacctta 55477440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 73 - 175
Target Start/End: Complemental strand, 16186 - 16085
Alignment:
Q  73 cctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacc 172  Q
    |||||||| |||| || ||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||| ||||| ||||||||||    
T  16186 cctaattctccaactt-tcaaaaactaatcctacaacttgctaaatctaatcatccgaattatagacttaagaaaattgaatgttagtctcacccttacc 16088  T
Q  173 tta 175  Q
    |||    
T  16087 tta 16085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 73 - 175
Target Start/End: Complemental strand, 25373 - 25272
Alignment:
Q  73 cctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacc 172  Q
    |||||||| |||| || ||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||| ||| ||||| ||||||||||    
T  25373 cctaattctccaactt-tcaaaaactaatcctacaacttgctaaatctaatcatcagaattatcgacttaagaaaattgaatgttagtctcacccttacc 25275  T
Q  173 tta 175  Q
    |||    
T  25274 tta 25272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 7757 - 7680
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  7757 cacccttaccttcgataatcgaaatcgcagcccttcttggtcctcttctcttttcttgacttttctcccttttctctg 7680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 2620 - 2696
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcctttttctctg 240  Q
    ||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  2620 cacccttaccttagaaagtcgaaatcgcagccct-ctaggtcctcttcccttttcttgacttttctcccttttctctg 2696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 57; Significance: 1e-23; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 447377 - 447465
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  447377 ttctcaaaaactaaccctacaacatgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 447465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 498287 - 498375
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||| |||| |||||||| |||| ||| |||||||||| ||||||||    
T  498287 ttctcaaaaactaaccctacaacatgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccaccattacctta 498375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 84560 - 84457
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| |||| ||| |  ||| |||||||||  |||||||||| ||||||||||||||| |||||||| || |||| ||||||||| |||||    
T  84560 tttaacctaattctccaacttc-cttaaattaatcctact-cttgttaaag-taatcatcagaattacagacttaataagattgaatgctagtctcaccc 84464  T
Q  168 ttacctt 174  Q
    |||||||    
T  84463 ttacctt 84457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 501818 - 501909
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||| |||| ||||||||||||    
T  501818 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtaccacacttaccttagat 501909  T

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Target: scaffold0001; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 152160 - 152108
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    ||||||||||| ||||||||  | || ||| ||||||||||||||||||||||    
T  152160 tcagaattataaacttaagattactgaatgatagtcccacccttaccttagat 152108  T

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Target: scaffold0357 (Bit Score: 56; Significance: 5e-23; HSPs: 3)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 4811 - 4917
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| | |||| ||||||||||||||||||||| |||||||   || ||||||||| |||||||||| | ||||| |||||||||||||||    
T  4811 tttaacctaattctcaaatt-ctcaaaaactaatcctacaacctgttaaatacaaccatcagaatcatagacttaatagaattgaatgctagtcccaccc 4909  T
Q  168 ttacctta 175  Q
    ||||||||    
T  4910 ttacctta 4917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 14096 - 14144
Alignment:
Q  147 aattggatgctagtcccacccttaccttagataatcgaaatcgcagccct 196  Q
    ||||| ||||||||| ||||||||||||||| |||| |||||||||||||    
T  14096 aattgaatgctagtctcacccttaccttaga-aatcaaaatcgcagccct 14144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 226
Target Start/End: Complemental strand, 15405 - 15279
Alignment:
Q  98 taatcctacaacttgttaaagctaatcatcagaattatagac-ttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagccct 196  Q
    |||||||||| |||||||||   || ||||||||||||| |  |||| | ||||| ||||||||| ||||||||||||||| ||| ||||||||||| |     
T  15405 taatcctaca-cttgttaaatacaaccatcagaattatatagattaatagaattgaatgctagtctcacccttaccttaga-aattgaaatcgcagctc- 15309  T
Q  197 tctaggtcctcttcccttttcttgactttt 226  Q
    |  ||||||||||| ||| ||||| |||||    
T  15308 taaaggtcctcttctcttctcttggctttt 15279  T

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Target: scaffold1419 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 89 - 175
Target Start/End: Original strand, 923 - 1008
Alignment:
Q  89 ctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||| |||||| | ||||||| |||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  923 ctcaaaaactaaacctaca-catgttaaatctaatcatcataattatagacttaagaaaattgaatgctagtcccagccttacctta 1008  T

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Target: scaffold0169 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 28778 - 28696
Alignment:
Q  93 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||| |||||||||||||||| |||||||||||||||| || |||||||| |||| ||| |||||||||||||||||||    
T  28778 aaaactaaacctacaacttgttaaatctaatcatcagaattaaaggcttaagaagattgaatgttagtcccacccttacctta 28696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 93 - 238
Target Start/End: Original strand, 4507 - 4655
Alignment:
Q  93 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta--gataatcgaaatc-g 189  Q
    ||||| || |||||||||||||||| ||||||||||||||||||  ||||||||||||| ||| |||||  ||||||||||||   | |||||||||| |    
T  4507 aaaacaaaacctacaacttgttaaatctaatcatcagaattataagcttaagaaaattgaatgttagtctgacccttaccttaatcaaaatcgaaatcgg 4606  T
Q  190 cagcccttctaggtcctcttcccttttcttgacttttctcctttttctc 238  Q
    |||||  ||| ||| || ||| ||| ||||||||||||||| |||||||    
T  4607 cagcctctcttggttcttttctcttctcttgacttttctcccttttctc 4655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 191886 - 191797
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 176  Q
    |||||||||||||| |||||||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| ||||||||||||||||||||    
T  191886 ttctcaaaaactaaacctacaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccacccttaccttag 191797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 68 - 238
Target Start/End: Original strand, 86406 - 86576
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| |||| ||||| |||  |||||||||| |||||||||  ||||||||||||||| |||||||| |  |||| ||||||||| |||||    
T  86406 tttaacctaattctccaacttctctaaat-taatcctaca-cttgttaaat-taatcatcagaattacagacttaataggattgaatgctagtctcaccc 86502  T
Q  168 ttaccttag-ataatcgaaatcgcagcc--cttctaggtcctcttcccttttcttgacttttctcctttttctc 238  Q
    ||||||||| | | ||||||||||||||  |||  |||| ||| || ||| ||||||||||||||| |||||||    
T  86503 ttaccttagtaaagtcgaaatcgcagccctcttgaaggttctcctctcttctcttgacttttctcccttttctc 86576  T

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Target: scaffold1835 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold1835
Description:

Target: scaffold1835; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 171 - 259
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||||| || |||||||| |||| ||| ||||| |||||||||||||    
T  171 ttctcaaaaactaaccctacaacatgttaaatctaatcatcagaattaaaggcttaagaagattgaatgttagtcgcacccttacctta 259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 65 - 177
Target Start/End: Original strand, 16276 - 16387
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 164  Q
    |||||||||||||||||| |||| |||||||||||| |||||||| ||||||||  |||  ||||||| ||||||||||||  | || ||| ||||||||    
T  16276 acttttaacctaattcccaaatt-ctcaaaaactaaacctacaacatgttaaaggcaattttcagaataatagacttaagattaatgaatgttagtccca 16374  T
Q  165 cccttaccttaga 177  Q
    |||||||||||||    
T  16375 cccttaccttaga 16387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 93 - 235
Target Start/End: Complemental strand, 17446 - 17304
Alignment:
Q  93 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataa-tcgaaatcgca 191  Q
    ||||||||||||||| |||||||||   || ||||||||||| |||||||| || |||| ||| ||||| ||||||||||||| |||| | |||||||||    
T  17446 aaaactaatcctaca-cttgttaaatacaaccatcagaattacagacttaataagattgaatgttagtctcacccttacctta-ataatttgaaatcgca 17349  T
Q  192 gcc-cttctaggtcctcttcccttttcttgacttttctccttttt 235  Q
    ||| || || |||||||||| ||| ||||||||||||||||||||    
T  17348 gcctctacttggtcctcttctcttctcttgacttttctccttttt 17304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 47548 - 47620
Alignment:
Q  163 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctccttttt 235  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| ||||| |||||    
T  47548 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttccctttccttgactcttctctttttt 47620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 94 - 193
Target Start/End: Original strand, 1411 - 1508
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagc 193  Q
    |||||||||||||| |||||||||   ||||||||||||||||||||||| || |||| ||||||||| ||||||||||||||| ||| |||||||||||    
T  1411 aaactaatcctaca-cttgttaaattcaatcatcagaattatagacttaataagattgaatgctagtctcacccttaccttaga-aatagaaatcgcagc 1508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 2126 - 2232
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| | |||| ||||||||||||||||||||| |||||||   || ||| ||||| |||||||||| | ||||| |||||||||||||||    
T  2126 tttaacctaattctcaaatt-ctcaaaaactaatcctacaacctgttaaatacaaccattagaatcatagacttaatagaattgaatgctagtcccaccc 2224  T
Q  168 ttacctta 175  Q
    ||||||||    
T  2225 ttacctta 2232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 52; Significance: 1e-20; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 98 - 237
Target Start/End: Complemental strand, 59963 - 59823
Alignment:
Q  98 taatcctacaacttgttaaagctaatcatcagaattataga-cttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagccct 196  Q
    |||||||||| |||||||||   || ||||||||||||| | ||||| | ||||| ||||||||| ||||||||||||||| ||||||||||||| ||||    
T  59963 taatcctaca-cttgttaaatacaaccatcagaattatacaacttaatagaattgaatgctagtctcacccttaccttaga-aatcgaaatcgcaaccct 59866  T
Q  197 --tctaggtcctcttcccttttcttgacttttctcctttttct 237  Q
      ||||||| |||||| ||| ||||||||||||||| ||||||    
T  59865 cttctaggttctcttctcttctcttgacttttctcccttttct 59823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 7174 - 7260
Alignment:
Q  88 tctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 174  Q
    ||||| ||||||| |||||||| |||||||  ||||||||||||| |||| |||||||| |||| ||| ||||||||||||||||||    
T  7174 tctcacaaactaaacctacaacatgttaaatataatcatcagaatcataggcttaagaagattgaatgttagtcccacccttacctt 7260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 1528 - 1610
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 176  Q
    ||||||| |||||||| ||||||| |||||||||||||| |||| |||||||| |||| ||| |||||||||| || ||||||    
T  1528 aaactaaacctacaacatgttaaatctaatcatcagaatcataggcttaagaatattgaatgttagtcccacctttgccttag 1610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0914 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 2614 - 2696
Alignment:
Q  93 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||| | ||| |||||||||| |||||||||||||||||||||||||||| |||| ||| ||||| |||||||||||||    
T  2614 aaaactaaacttacgacttgttaaatctaatcatcagaattatagacttaagaagattgaatgttagtctcacccttacctta 2696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 82 - 235
Target Start/End: Complemental strand, 5552 - 5399
Alignment:
Q  82 ccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataa- 180  Q
    |||| ||||| ||||||||||||||| |||||||||   || ||||||||||| |||||||| || |||| ||| ||||| |||||||||||| |||||     
T  5552 ccaacttctctaaaactaatcctaca-cttgttaaatacaaccatcagaattacagacttaataagattgaatgttagtctcacccttacctt-gataat 5455  T
Q  181 tcgaaatcgcagcc-cttctaggtcctcttcccttttcttgacttttctccttttt 235  Q
    | |||||||||||| || ||  ||||||||| ||| ||||||||||||||| ||||    
T  5454 ttgaaatcgcagcctctacttagtcctcttctcttctcttgacttttctccctttt 5399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 33775 - 33669
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| | |||| ||||||||||||||||||||| |||||||   || |||| |||| |||||||||| | ||||| |||||||||||| ||    
T  33775 tttaacctaattctcaaatt-ctcaaaaactaatcctacaacctgttaaatacaaccatcggaatcatagacttaatagaattgaatgctagtcccagcc 33677  T
Q  168 ttacctta 175  Q
    ||||||||    
T  33676 ttacctta 33669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 31447 - 31370
Alignment:
Q  98 taatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||  |||||||   || ||||||||| |||||||||| | ||||| |||||||||||||||||||||||    
T  31447 taatcctacaatctgttaaatacaaccatcagaatcatagacttaatagaattgaatgctagtcccacccttacctta 31370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 62435 - 62265
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| |||| ||||| |||  ||||||||||  ||||||||  ||||||||||||||| |||||||  || |||| ||||||||| |||||    
T  62435 tttaacctaattctccaacttctctaaat-taatcctacat-ttgttaaat-taatcatcagaattacagacttattaagattgaatgctagtctcaccc 62339  T
Q  168 ttaccttag-ataatcgaaatcgcag--cccttctaggtcctcttcccttttcttgacttttctcctttttctc 238  Q
    ||||||||| | ||||||||||||||  | |||  |||| ||| || ||| ||||||||||||||| |||||||    
T  62338 ttaccttagcaaaatcgaaatcgcagctctcttgaaggttctcctctcttctcttgacttttctccattttctc 62265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 58700 - 58785
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||| |||||||||||| |||||||||||| |||||||   |||| |||||||||| ||||||| ||| ||||| |||||||||||||    
T  58700 ttctccaaaactaatccttcaacttgttaaatctaatca---gaatcatagacttaataaaattgaatgttagtctcacccttacctta 58785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 13633 - 13552
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||| |||||||||||||||  ||||||||||||||||  | |||||||| |||| ||| |||||||||||||||||||    
T  13633 aaactaaacctacaacttgttaagtctaatcatcagaattaacggcttaagaagattgaatgttagtcccacccttacctta 13552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 67 - 175
Target Start/End: Complemental strand, 203647 - 203540
Alignment:
Q  67 ttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattataga-cttaagaaaattggatgctagtcccac 165  Q
    |||||||||||||  |||||| ||||||| |||| |||||||||||||||| |||| ||||||||||||| | |||||||| |||| ||| ||||| |||    
T  203647 ttttaacctaattttccaatt-ctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcac 203550  T
Q  166 ccttacctta 175  Q
    ||||||||||    
T  203549 ccttacctta 203540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 220420 - 220334
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| ||||| |  ||||||| |||||||||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  220420 ttctcaaaaactaaacctacca--tgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 220334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 54900 - 54812
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||||||||||| |||||||||| ||||| ||   |||||| |||| ||| ||||||||| |||||||||    
T  54900 ttctcaaaaactaaccctacaacttgttaaatctaatcatcataattaaaggtataagaagattgaatgttagtcccactcttacctta 54812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 93 - 238
Target Start/End: Original strand, 39208 - 39358
Alignment:
Q  93 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcag 192  Q
    ||||| ||||||||| |||||||||   || ||| ||||||| |||||||| || |||| ||||||||| ||||||||||||||| ||||||||||| ||    
T  39208 aaaacaaatcctaca-cttgttaaatacaaccattagaattacagacttaataagattgaatgctagtctcacccttaccttagaaaatcgaaatcgtag 39306  T
Q  193 cc-cttctaggtc-----ctcttcccttttcttgacttttctcctttttctc 238  Q
    || ||  | ||||     |||||| ||| |||||||||||||||||||||||    
T  39307 cctctctttggtcctcttctcttctcttctcttgacttttctcctttttctc 39358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 37390 - 37283
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 164  Q
    ||||||||||||||| || | ||||  ||||||||| |||||| | ||||||| |||||||||||||| |||| |||||||| |||| ||| ||||| ||    
T  37390 acttttaacctaatttccaactttc--aaaaactaaacctaca-catgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtctca 37294  T
Q  165 cccttacctta 175  Q
    |||||||||||    
T  37293 cccttacctta 37283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 97893 - 97999
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| | |||| |||||||| |||||||||||| |||||||   || ||||||||| |||||||||| | ||||| ||| |||| ||||||    
T  97893 tttaacctaattctcaaatt-ctcaaaaattaatcctacaacctgttaaatacaaccatcagaatcatagacttaatagaattgaatgttagttccaccc 97991  T
Q  168 ttacctta 175  Q
    ||||||||    
T  97992 ttacctta 97999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 107171 - 107277
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| | |||| |||||||| |||||||||||| |||||||   || ||||||||| |||||||||| | ||||| ||| |||| ||||||    
T  107171 tttaacctaattctcaaatt-ctcaaaaattaatcctacaacctgttaaatacaaccatcagaatcatagacttaatagaattgaatgttagttccaccc 107269  T
Q  168 ttacctta 175  Q
    ||||||||    
T  107270 ttacctta 107277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 177
Target Start/End: Complemental strand, 334 - 245
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    ||||| ||||| ||||||||| |||||||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||||| ||||||    
T  334 ttctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttatcttaga 245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 4)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 65 - 170
Target Start/End: Original strand, 14205 - 14307
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 164  Q
    |||||||| ||||||||  || |||||||||||||| |||||||| | ||||| ||||| |||||||| |||| |||||||| |||| ||| ||||||||    
T  14205 acttttaatctaattcc--aaattctcaaaaactaa-cctacaacatattaaatctaattatcagaatcataggcttaagaagattgaatgttagtccca 14301  T
Q  165 ccctta 170  Q
    ||||||    
T  14302 ccctta 14307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 23077 - 23177
Alignment:
Q  82 ccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataat 181  Q
    |||| |||||||||||||| |||||||| ||||||| ||||| |||||||| ||||  ||||||| |||| ||| |||||| |||||||||||||| |||    
T  23077 ccaaattctcaaaaactaa-cctacaacatgttaaatctaattatcagaatcataggattaagaagattgaatgttagtcc-acccttaccttagaaaat 23174  T
Q  182 cga 184  Q
    |||    
T  23175 cga 23177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 20598 - 20686
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  20598 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 20686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 13127 - 13031
Alignment:
Q  82 ccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    |||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||||    
T  13127 ccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttaga 13031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 13019 - 13100
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||| ||| |||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  13019 aaactaaacctccaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 13100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 17423 - 17326
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcga 184  Q
    |||||||||||||| |||||||  ||||||| ||||| |||||||| |||  |||||||| | || ||| |||||||| |||||||||||| ||||||    
T  17423 ttctcaaaaactaaacctacaaaatgttaaatctaattatcagaatcatatgcttaagaagactgaatgttagtcccaaccttaccttagaaaatcga 17326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 46309 - 46240
Alignment:
Q  108 acttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    ||||||||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||||||||||||    
T  46309 acttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttaccttaga 46240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 7205 - 7296
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||||||    
T  7205 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttagat 7296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 9771 - 9853
Alignment:
Q  92 aaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||||| |||||| | ||||||| |||||||||||||| |||| |||||||| |||| ||| ||||| |||||||||||||    
T  9771 aaaaactaaacctaca-catgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtctcacccttacctta 9853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 22794 - 22872
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||||||||||||| |||   |||||||| |||||||||| |||||||  || ||||| |||||||||||||    
T  22794 aaactaatcctacaacttgttaaatcta---atcagaatcatagacttaaaaaaattgagtgttagtctcacccttacctta 22872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 13725 - 13647
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||||||||||||| |||   |||||||| |||||||||| |||||||  || ||||| |||||||||||||    
T  13725 aaactaatcctacaacttgttaaatcta---atcagaatcatagacttaaaaaaattgagtgttagtctcacccttacctta 13647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 268545 - 268621
Alignment:
Q  98 taatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||| ||||||||| |||||||||||||||| || ||||| | ||||| ||  ||||| |||||||||||||    
T  268545 taatcctaca-cttgttaaatctaatcatcagaattacaggcttaatataattgaataatagtctcacccttacctta 268621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 176
Target Start/End: Complemental strand, 165725 - 165615
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 164  Q
    ||||||||||||||| ||||| ||||||| |||||| | |||||| ||||||||  |||  ||||||| |||| |||||||  | || |||  |||||||    
T  165725 acttttaacctaatt-cccaaattctcaagaactaaacatacaacatgttaaagacaattttcagaataatagtcttaagattaatgaatgtaagtccca 165627  T
Q  165 cccttaccttag 176  Q
    ||||||| ||||    
T  165626 cccttacgttag 165615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 12397 - 12455
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcga 184  Q
    ||||||| ||||||||||||| |||| ||||||||| |||||||||||||| |||||||    
T  12397 tcagaatcatagacttaagaagattgaatgctagtctcacccttaccttagttaatcga 12455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 1042 - 1124
Alignment:
Q  93 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||| ||| ||| |||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  1042 aaaattaaacctccaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 1124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 1133 - 1051
Alignment:
Q  93 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||| ||| ||| |||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  1133 aaaattaaacctccaacatgttaaatctaataatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 1051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 3993 - 4091
Alignment:
Q  86 tttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcga 184  Q
    ||||||| || ||||||| ||||| ||||||| ||||| |||| ||| |||| |||||||| |||  ||| ||||| ||||||||||||||| ||||||    
T  3993 tttctcataatctaatcccacaacatgttaaatctaattatcataatcataggcttaagaagattaaatgttagtctcacccttaccttagaaaatcga 4091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 72399 - 72481
Alignment:
Q  93 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||| ||| |||| ||||||| ||||| ||||||||  ||| |||||||| |||| ||| |||||||||||||||||||    
T  72399 aaaactaaacctccaacatgttaaacctaattatcagaatcgtaggcttaagaagattgaatgttagtcccacccttacctta 72481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 75107 - 75025
Alignment:
Q  93 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||| |||||||| ||||||| ||||| || ||||| |||  |||||||| |||| ||| |||||||||||||||||||    
T  75107 aaaactaaacctacaacatgttaaatctaattataagaataatatgcttaagaagattgaatgttagtcccacccttacctta 75025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 109 - 238
Target Start/End: Original strand, 72564 - 72692
Alignment:
Q  109 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtcctct 208  Q
    |||||||||  ||||||||||||||| |||||||| || |||| ||| ||||| ||||||||||||| |  || |||||| |||||| |||||||| ||     
T  72564 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttataagat-gaaatcacagcccctctaggtcttc- 72661  T
Q  209 tcccttttcttgac-ttttctcctttttctc 238  Q
    |||||| ||||| | |||||||| |||||||    
T  72662 tcccttctcttggctttttctcccttttctc 72692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 963 - 864
Alignment:
Q  138 acttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcctttttc 236  Q
    |||||| | ||||| ||||||||| | ||||||||||||| ||| ||||||||||||| |||||||||||||| ||| ||||| | |||||||| |||||    
T  963 acttaatagaattgaatgctagtctcgcccttaccttaga-aattgaaatcgcagccc-tctaggtcctcttctcttctcttgtctttttctcccttttc 866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 7547 - 7627
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||| ||||||||| |||||||||  ||||||||||||||| |||||||| | ||||| ||| ||||| |||||||||||||    
T  7547 aaaccaatcctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgttagtctcacccttacctta 7627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 177
Target Start/End: Complemental strand, 1007 - 903
Alignment:
Q  73 cctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagac-ttaagaaaattggatgctagtcccacccttac 171  Q
    |||||||| |||| ||||| |||| |||||||||| |||||||||   || ||||||||||||| |  |||| ||||||| ||||||||| |||||||||    
T  1007 cctaattctccaacttctctaaaattaatcctaca-cttgttaaatacaaccatcagaattatatagattaataaaattgaatgctagtctcacccttac 909  T
Q  172 cttaga 177  Q
    ||||||    
T  908 cttaga 903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 42278 - 42347
Alignment:
Q  106 caacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  42278 caacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 42347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 22604 - 22497
Alignment:
Q  68 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 167  Q
    ||||||||||||| | |||| ||| |||||||| |||||| |||||||||   || ||||||||||| |||||||| |  |||| ||||||||| |||||    
T  22604 tttaacctaattctcaaatt-ctctaaaactaaccctaca-cttgttaaataaaaccatcagaattacagacttaataggattgcatgctagtctcaccc 22507  T
Q  168 ttaccttaga 177  Q
    ||||||||||    
T  22506 ttaccttaga 22497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 6985 - 6897
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  6985 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 6897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 184
Target Start/End: Original strand, 10278 - 10396
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 163  Q
    |||||||||| |||||||| |||| ||||||| |||| || ||||| || ||||   ||| |||||||| |||| |||||||| |||| ||| |||||||    
T  10278 acttttaaccctaattcccaaatt-ctcaaaa-ctaaaccaacaacatgctaaatgcaattatcagaatcataggcttaagaagattgaatgttagtccc 10375  T
Q  164 acccttaccttagataatcga 184  Q
    ||||||||||||| |||||||    
T  10376 acccttaccttagttaatcga 10396  T

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Target: scaffold0322 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 18691 - 18779
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  18691 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 18779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 204
Target Start/End: Original strand, 19126 - 19249
Alignment:
Q  81 cccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagata 179  Q
    ||||| ||||||||||||||  |||||||| ||||||| |||||  ||||||| |  |||||||||  |||| ||| ||||||||||||||||||| |      
T  19126 cccaaattctcaaaaactaaaacctacaacatgttaaatctaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttata-g 19224  T
Q  180 atcgaaatcgcagcccttctaggtc 204  Q
    ||  |||||||||| ||||||||||    
T  19225 atgaaaatcgcagcacttctaggtc 19249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 21610 - 21701
Alignment:
Q  87 ttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||||    
T  21610 ttctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttaga 21701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 34250 - 34338
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  34250 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 34338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 184
Target Start/End: Original strand, 9049 - 9168
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 163  Q
    |||||||||| |||||||| |||| |||||||| ||| |||||||| || ||||   ||| || ||||| |||  |||||||| |||| ||| |||||||    
T  9049 acttttaaccctaattcccaaatt-ctcaaaaattaaacctacaacatgctaaatggaattattagaatcatacgcttaagaagattgaatgttagtccc 9147  T
Q  164 acccttaccttagataatcga 184  Q
    ||||||||||||| |||||||    
T  9148 acccttaccttagttaatcga 9168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 107229 - 107317
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  107229 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 107317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 115731 - 115818
Alignment:
Q  88 tctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  115731 tctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 115818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 171
Target Start/End: Original strand, 7874 - 7981
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 163  Q
    ||||||||||| | | ||||| ||||||||||||||  |||||||| ||||||| | |||  | ||||| ||||||||||||  |||| ||| |||||||    
T  7874 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttttagaatcatagacttaagattattgaatgttagtccc 7973  T
Q  164 acccttac 171  Q
    ||||||||    
T  7974 acccttac 7981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 36; Significance: 0.00000000004; HSPs: 3)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 14787 - 14898
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 163  Q
    ||||||||||| | | ||||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||    
T  14787 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtccc 14886  T
Q  164 acccttacctta 175  Q
    ||||||||||||    
T  14887 acccttacctta 14898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 22788 - 22700
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||| | |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  22788 ttctcaaaaactcaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 22700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 172
Target Start/End: Complemental strand, 20612 - 20527
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacc 172  Q
    |||||||||||| | |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||    
T  20612 ttctcaaaaactgaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacc 20527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 171
Target Start/End: Complemental strand, 5433 - 5326
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 163  Q
    ||||||||||| | | ||||| ||||||||||||||  |||||||| ||||||| | |||  | ||||| ||||||||||||  |||| ||| |||||||    
T  5433 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttttagaatcatagacttaagattattgaatgttagtccc 5334  T
Q  164 acccttac 171  Q
    ||||||||    
T  5333 acccttac 5326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 82967 - 83050
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    ||||||| ||| |||| ||||||| ||||| || ||||| |||| |||||||| |||| ||| || ||||||||||||||||||    
T  82967 aaactaaacctccaacatgttaaatctaattattagaatcataggcttaagaagattgaatgttaatcccacccttaccttaga 83050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 174
Target Start/End: Original strand, 185023 - 185110
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 174  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||    
T  185023 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 185110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 172158 - 172106
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    ||||||||||||||||||||  | || ||| ||||||||||||||||||||||    
T  172158 tcagaattatagacttaagatcactgaatgatagtcccacccttaccttagat 172106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 23206 - 23124
Alignment:
Q  93 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||| ||| ||| |||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| ||||| |||||||||||||    
T  23206 aaaattaaacctccaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcacacccttacctta 23124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 1112 - 1200
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||| | |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  1112 ttctcaaaaactcaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 1200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 2092 - 2028
Alignment:
Q  111 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||| ||||| |||||||| |||  |||||||| |||| ||| |||||||||||||||||||    
T  2092 tgttaaatctaattatcagaatcataagcttaagaagattgaatgttagtcccacccttacctta 2028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 5448 - 5536
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| || ||||||||||||||||    
T  5448 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttattcccacccttacctta 5536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 7538 - 7626
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| |||||||||||||    
T  7538 ttctcaaaaactaaacctacaacatgttaaatacaattctcagaatcatagactcaagattattgaatgttagtctcacccttacctta 7626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 10947 - 10895
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    ||||||||||||||||||||  | || ||| ||||||||||||||||||||||    
T  10947 tcagaattatagacttaagatcactgaatgatagtcccacccttaccttagat 10895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 493 - 581
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| ||||||| ||||| |||| ||| | ||  | ||||| |||| ||| ||||| |||||||||||||    
T  493 ttctcaaaaactaaccctacaacatgttaaatctaatgatcataatcaaaggttgaagaagattgaatgttagtctcacccttacctta 581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 11371 - 11319
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    ||||||||||||||||||||  | || ||| ||||||||||||||||||||||    
T  11371 tcagaattatagacttaagatcactgaatgatagtcccacccttaccttagat 11319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 15771 - 15719
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 178  Q
    ||||||||||||||||||||  | || ||| ||||||||||||||||||||||    
T  15771 tcagaattatagacttaagatcactgaatgatagtcccacccttaccttagat 15719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 3574 - 3662
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| | |||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  3574 ttctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 3662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 10725 - 10789
Alignment:
Q  111 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||  |||||||||||||||  | |||||||| |||| ||| |||||||||||||||||||    
T  10725 tgttaaatttaatcatcagaattaacggcttaagaagattgaatgttagtcccacccttacctta 10789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 38659 - 38770
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  38659 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 38757  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  38758 cacccttacctta 38770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 158622 - 158733
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  158622 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 158720  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  158721 cacccttacctta 158733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 21926 - 22014
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||| |||||||   |||  ||| ||| ||||||| ||||  |||| ||| ||||| |||||||||||||    
T  21926 ttctcaaaaactaaacctacaacatgttaaatacaattttcacaatcatagactcaagattattgaatgttagtctcacccttacctta 22014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 1045 - 1128
Alignment:
Q  94 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 177  Q
    ||||||| |||  ||| ||||||| ||||| || ||||| |||| |||||||| |||| ||| ||||| |||||||||||||||    
T  1045 aaactaaacctctaacatgttaaatctaattattagaatcataggcttaagaagattgaatgttagtctcacccttaccttaga 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 238
Target Start/End: Complemental strand, 1670 - 1540
Alignment:
Q  111 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta--gataatcgaaatc-gcagcccttctaggtcctc 207  Q
    ||||||| |||||||||| ||||||   ||||||| | ||| ||| ||||| |||||||||||||   | |||||||||| ||||||  ||| ||| |||    
T  1670 tgttaaatctaatcatcataattatcagcttaagagagttgaatgttagtctcacccttaccttaatcaaaatcgaaatcagcagcctctcttggttctc 1571  T
Q  208 ttcccttttcttgacttttctcctttttctc 238  Q
    ||  ||| ||||||||||||||| |||||||    
T  1570 ttttcttctcttgacttttctcccttttctc 1540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 176
Target Start/End: Original strand, 8338 - 8448
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 164  Q
    |||||||||||||||| | |||| |||||||||||| ||| |||| ||||||||  |||  ||||||| || |||||||||  | || ||| |||| |||    
T  8338 acttttaacctaattctcaaatt-ctcaaaaactaaaccttcaacatgttaaagacaattttcagaataatggacttaagattaatgaatgttagttcca 8436  T
Q  165 cccttaccttag 176  Q
    |||||| |||||    
T  8437 cccttatcttag 8448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 3027 - 2918
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 163  Q
    |||||||||| |||||||| |||| |||||||||||  ||||||||| ||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||    
T  3027 acttttaaccctaattcccaaatt-ctcaaaaactatacctacaact-gttaaatacaattttcagaatcatagactcaagattattgaatgttagtccc 2930  T
Q  164 acccttacctta 175  Q
    ||||||||||||    
T  2929 acccttacctta 2918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 236
Target Start/End: Original strand, 42674 - 42785
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcc-cttttcttgactt 224  Q
    ||||||| |||| |||||||| |||| ||| ||||||||||||||||||| | |||  ||||| |||||  |||||||| ||| || ||| |||||||||    
T  42674 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaaagaatgaaaatcacagcc--tctaggtcttctccctcttctcttgactt 42771  T
Q  225 tt--ctcctttttc 236  Q
    ||  ||||||||||    
T  42772 tttcctcctttttc 42785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 43256 - 43169
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 174  Q
    |||||||||||||| |||||||| ||||||    |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||    
T  43256 ttctcaaaaactaaacctacaacatgttaagtacaatattcagaatcatagactcaagattattgaatgttagtcccacccttacctt 43169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 175
Target Start/End: Complemental strand, 137 - 36
Alignment:
Q  73 cctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacc 172  Q
    |||||||| | ||||| ||||||||||| |||||||| |||||||   |||  ||||||| | ||||| ||||  |||| ||| ||||||||||||||||    
T  137 cctaattctcaaattt-tcaaaaactaaacctacaacatgttaaatacaattttcagaatcacagactcaagattattgaatgttagtcccacccttacc 39  T
Q  173 tta 175  Q
    |||    
T  38 tta 36  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 6804 - 6893
Alignment:
Q  87 ttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||||||||||  |||||||| ||||||| | |||  |||||||||  |||||||||  |||| ||| ||||| |||||||||||||    
T  6804 ttctcaaaaactaaaacctacaacatgttaaatccaattttcagaattaatgacttaagattattgaatgttagtctcacccttacctta 6893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 177
Target Start/End: Original strand, 13462 - 13566
Alignment:
Q  73 cctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagac-ttaagaaaattggatgctagtcccacccttac 171  Q
    |||||||| |||| ||||| ||||  ||||||||| |||||||||   || ||||||||||||| |  |||| | ||||| ||||||||| |||||||||    
T  13462 cctaattctccaacttctctaaaatcaatcctaca-cttgttaaatacaaccatcagaattatataaattaatagaattgaatgctagtctcacccttac 13560  T
Q  172 cttaga 177  Q
    ||||||    
T  13561 cttaga 13566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 18596 - 18645
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  18596 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 18645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 22926 - 23038
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaacta-atcctacaacttgttaaagctaatcatcagaattatagacttaa-gaaaattggatgctagtc 161  Q
    |||||||||| |||||||| |||| ||||||||||| | |||||||| ||||||| | |||  | ||||| |||||||||| ||  |||| ||| |||||    
T  22926 acttttaaccctaattcccaaatt-ctcaaaaactataacctacaacatgttaaatccaatttttagaatcatagacttaaagattattgaatgttagtc 23024  T
Q  162 ccacccttacctta 175  Q
    ||||||||||||||    
T  23025 ccacccttacctta 23038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 7534 - 7457
Alignment:
Q  147 aattggatgctagtcccacccttaccttagataatc-gaaatcgcagcccttctaggtcctcttcccttttcttgactttt 226  Q
    ||||| ||||||||| ||||| |||||||  ||||| ||||||||||||| |||||||| || |||||| |||||||||||    
T  7534 aattgaatgctagtctcacccatacctta--taatcagaaatcgcagcccctctaggtcttc-tcccttctcttgactttt 7457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 209863 - 209912
Alignment:
Q  126 tcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||||||||||||||||  | || ||| |||||||||||||||||||    
T  209863 tcagaattatagacttaagatcactgaatgatagtcccacccttacctta 209912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 2008 - 2096
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||| ||| | |||||   |||  ||||||| ||||||||||||  |||| ||| ||||| |||||||||||||    
T  2008 ttctcaaaaactaaacctataacatattaaatacaattttcagaatcatagacttaagattattgaatgttagtctcacccttacctta 2096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 1462 - 1550
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    ||||||| |||||| |||||||| |||||||   |||  ||| ||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  1462 ttctcaataactaaacctacaacatgttaaatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 1550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 226
Target Start/End: Complemental strand, 307 - 216
Alignment:
Q  134 atagacttaagaaaattggatgctagtcccacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgactttt 226  Q
    |||||||||| || |||| | | ||||| ||||||||||||  || ||  ||||||||||||||||||||| || |||||| ||||| |||||    
T  307 atagacttaataagattgcaagttagtctcacccttaccttgtatgatgaaaatcgcagcccttctaggtcttc-tcccttctcttggctttt 216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 7032 - 6992
Alignment:
Q  157 tagtcccacccttaccttagataatcgaaatcgcagccctt 197  Q
    ||||| ||||||||||||||||||||||| | |||||||||    
T  7032 tagtctcacccttaccttagataatcgaagttgcagccctt 6992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 10738 - 10826
Alignment:
Q  87 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 175  Q
    |||||||||||||| |||||||  |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| |||||||||||||    
T  10738 ttctcaaaaactaaacctacaatatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 10826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 56331 - 56220
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||  ||||  |||| ||| ||||||    
T  56331 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaagattattgaatgttagtcc 56233  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  56232 cacccttacctta 56220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 29; Significance: 0.0000006; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 135050 - 135161
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||  ||||  |||| ||| ||||||    
T  135050 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaagattattgaatgttagtcc 135148  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  135149 cacccttacctta 135161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 137519 - 137630
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||  ||||  |||| ||| ||||||    
T  137519 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaagattattgaatgttagtcc 137617  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  137618 cacccttacctta 137630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 139988 - 140099
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||  ||||  |||| ||| ||||||    
T  139988 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaagattattgaatgttagtcc 140086  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  140087 cacccttacctta 140099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 142457 - 142568
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||  ||||  |||| ||| ||||||    
T  142457 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaagattattgaatgttagtcc 142555  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  142556 cacccttacctta 142568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 144926 - 145037
Alignment:
Q  65 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 162  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||  ||||  |||| ||| ||||||    
T  144926 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaagattattgaatgttagtcc 145024  T
Q  163 cacccttacctta 175  Q
    |||||||||||||    
T  145025 cacccttacctta 145037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 177
Target Start/End: Complemental strand, 160386 - 160276
Alignment:
Q  65 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 164  Q
    ||||||||||||||||  ||||| ||||| | ||||  || |||| ||||||| ||||| |||||||| |||| |||||||| | || ||| |||||  |    
T  160386 acttttaacctaattcttcaatt-ctcaaga-ctaaatctccaacatgttaaatctaattatcagaatcataggcttaagaagagtgaatgttagtctta 160289  T
Q  165 cccttaccttaga 177  Q
    |||||||||||||    
T  160288 cccttaccttaga 160276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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