View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2155_high_7 (Length: 222)
Name: NF2155_high_7
Description: NF2155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2155_high_7 |
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| [»] scaffold0026 (1 HSPs) |
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Alignment Details
Target: scaffold0026 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 81244 - 81023
Alignment:
| Q |
1 |
agtttcttagaacttggttattttgttaagagatgataacagatacatgttgcagaattaatatgcatgaattacataacttaggcattgtgttctcaaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
81244 |
agtttcttagaacttggttattttgttaagagatgataacagatacatgttgcagaattaatatgcatgaattacataacttaggcattgtgttctcaaa |
81145 |
T |
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| Q |
101 |
ttggtgctgttatcctttggcctatttgcaaacaatttgggttattgcttgtgagcatagcttggtgttcaccatttttatatatctctttcttatcaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
81144 |
ttggtgctgttatcctttggcctatttgcaaacaatttgggttattgcttgtgagcatagcttggtgttcaccatttttatatatctctttcttatcaat |
81045 |
T |
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| Q |
201 |
tctttcgaaagggatcgtgtgc |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
81044 |
tctttcgaaagggatcgtgtgc |
81023 |
T |
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