View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2155_low_11 (Length: 202)
Name: NF2155_low_11
Description: NF2155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2155_low_11 |
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Alignment Details
Target: chr1 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 12 - 178
Target Start/End: Original strand, 13021358 - 13021531
Alignment:
| Q |
12 |
atgaaactttgacacgttacttaagtggtgaaatgttcgattgactcttcaaaagaaaatttgattgagtgaggataacttacattgtgtgcctcacaat |
111 |
Q |
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| T |
13021358 |
atgaaactttgacacgttacttaagtggtgaaatgttcgattgactcttcaagagaaaatttgattgagtgaggataacttacattgtgtgcctcacaat |
13021457 |
T |
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| Q |
112 |
tttttgatggagattagtccttaatatgta-------tcttaacatgtaaaccaaaattttagtcttttttttt |
178 |
Q |
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| T |
13021458 |
tttctgatggagattagtccttaatatgtatcttaattcttaacatgtaaaccaaaattttagtcttttttttt |
13021531 |
T |
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