View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21560_high_23 (Length: 230)
Name: NF21560_high_23
Description: NF21560
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21560_high_23 |
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Alignment Details
Target: chr3 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 38395954 - 38396076
Alignment:
| Q |
1 |
caaaaacatcaggtggattataatgttctccccccacttaatcaatcgacacgtgtcacttttcatttgatttcaccataagtcaagtcaagtagtcaac |
100 |
Q |
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| T |
38395954 |
caaaaacatcaggtggattataatgttctccccccacttaatcaatcgacacgtgtcacttttcgtttgatttcaccataagtcaagtcaagtagtcaac |
38396053 |
T |
|
| Q |
101 |
tgtgatcaccagtcccctccaac |
123 |
Q |
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||||||||||||||||||||||| |
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| T |
38396054 |
tgtgatcaccagtcccctccaac |
38396076 |
T |
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