View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21560_high_7 (Length: 464)
Name: NF21560_high_7
Description: NF21560
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21560_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 448; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 448; E-Value: 0
Query Start/End: Original strand, 1 - 448
Target Start/End: Original strand, 42086354 - 42086801
Alignment:
| Q |
1 |
cacaagctgatggatttgatgattggtcgatttttcaaaggaagaataatctctgtgattgggtcaactcagatggtattattttcaactcagtttcaga |
100 |
Q |
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| T |
42086354 |
cacaagctgatggatttgatgattggtcgatttttcaaaggaagaataatctctgtgattgggtcaactcagatggtattattttcaactcagtttcaga |
42086453 |
T |
|
| Q |
101 |
ttttgactctgttgggctcaactacttcaccaggaaattcaatattccggtttggtcgattggacccgttgttctgtcaaccggttcacgaggtaaagta |
200 |
Q |
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| T |
42086454 |
ttttgactctgttgggctcaactacttcaccaggaaattcaatattccggtttggtcgattggacccgttgttctgtcaaccggttcacgaggtaaagta |
42086553 |
T |
|
| Q |
201 |
ggtggaataaaccctaaagtttgtaaagaatggcttgatacaaaaccttcaaattcggtgttatttgtttgttttggatcgatgaacacaatttctgcta |
300 |
Q |
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| T |
42086554 |
ggtggaataaaccctaaagtttgtaaagaatggcttgatacaaaaccttcaaattcggtgttatttgtttgttttggatcgatgaacacaatttctgcta |
42086653 |
T |
|
| Q |
301 |
cacagatgatgcaacttggaacggcgttggaaaaaagtggaaagaatttcatctgggtagtgaggccaccaataggttttgatataaactcagagtttaa |
400 |
Q |
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| T |
42086654 |
cacagatgatgcaacttggaacggcgttggaaaaaagtggaaagaatttcatctgggtagtgaggccaccaataggttttgatataaactcagagtttaa |
42086753 |
T |
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| Q |
401 |
atatgaagagtggttaccattagggtttatggagaagattgtggaaac |
448 |
Q |
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| T |
42086754 |
atatgaagagtggttaccattagggtttatggagaagattgtggaaac |
42086801 |
T |
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