View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21560_low_24 (Length: 237)
Name: NF21560_low_24
Description: NF21560
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21560_low_24 |
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Alignment Details
Target: chr8 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 33305899 - 33305707
Alignment:
| Q |
1 |
atatataaaatatgttaacgttattgtatattaataagaattaatttacatgtataaacgttatcgtagaaccatcaattcatagtaagggcggaattga |
100 |
Q |
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| T |
33305899 |
atatataaaatatgttaacgttattgtatattaataagaattaatttacatgtataaacgttattgtagaaccatcaattcatagtaagggctgaattga |
33305800 |
T |
|
| Q |
101 |
gagattttcaagtattttaataagaattaatttgaagaatttcataaattatgtttcaatctttctttctttttaacgttattgtatatgtat |
193 |
Q |
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| T |
33305799 |
gagattttcatgtattttaataagaattaatttgaagaatttcataaattatgtttcaatctttctttctttttaacgttattgtatatgtat |
33305707 |
T |
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