View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21561_low_6 (Length: 254)
Name: NF21561_low_6
Description: NF21561
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21561_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 42037062 - 42036825
Alignment:
| Q |
1 |
ccgttggtcatggcttaggagaatcacttcttaaacgacaagcaagaatcaatgatgcatgttccttactcattcaatttggtttccatcaagggatttt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
42037062 |
ccgttggtcatggcttaggagaatcacttcttaaacgacaagcaagaatcaatgatgcatgttccttactcattcaattcggtttccatcaagggatttt |
42036963 |
T |
|
| Q |
101 |
taccatcaacaatcttcttagccaaggctacaccgacgatgactttctggagcttatcgagccaattacttccataacagatttggaggaattaagatat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
42036962 |
taccatcaacaatcttcttagccaaggctacaccgacgatgactttctggagcttatcaagccaattacttccataacagatttggaggaattaagatat |
42036863 |
T |
|
| Q |
201 |
ctttacaacataacttgtcaatataaccattttccaca |
238 |
Q |
| |
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|||||||||||||||||| ||||||||||||||||||| |
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|
| T |
42036862 |
ctttacaacataacttgtaaatataaccattttccaca |
42036825 |
T |
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