View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21562_high_55 (Length: 228)
Name: NF21562_high_55
Description: NF21562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21562_high_55 |
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Alignment Details
Target: chr2 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 14985075 - 14984883
Alignment:
| Q |
1 |
ttaattaaataaacatcacaatcttatggatcacgttttacatggatatatgtagttaatctattgtattatacgtgaaatattatataaccacctaaat |
100 |
Q |
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| T |
14985075 |
ttaattaaagaaacatcacaatcttatggatcacgttttacatggatatatgtagttaatctattgtattatacgtgaaatat-----aaccacctaaat |
14984981 |
T |
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| Q |
101 |
caattaaatatttttaaattataaataaattactgtatatttttcagtatgccgtaaaaaatattaagaaaaattcaaagtttctttaccttaatctt |
198 |
Q |
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| T |
14984980 |
caattaaatatttttaaattataaataaattactgtatatttttcagtatgccgtaaaaaatattaagaaaaattcaaagtttctttaccttaatctt |
14984883 |
T |
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