View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21562_low_54 (Length: 237)

Name: NF21562_low_54
Description: NF21562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21562_low_54
NF21562_low_54
[»] chr2 (33 HSPs)
chr2 (1-95)||(37719831-37719925)
chr2 (1-95)||(42182981-42183075)
chr2 (1-94)||(1110290-1110383)
chr2 (23-92)||(42182889-42182958)
chr2 (23-95)||(28898148-28898220)
chr2 (10-95)||(20951603-20951686)
chr2 (10-91)||(27968919-27969000)
chr2 (10-91)||(28091587-28091668)
chr2 (10-91)||(28101819-28101900)
chr2 (3-92)||(28898034-28898123)
chr2 (23-91)||(1107039-1107107)
chr2 (23-95)||(1110195-1110267)
chr2 (23-95)||(15508911-15508983)
chr2 (23-95)||(31395556-31395628)
chr2 (1-95)||(15509006-15509100)
chr2 (10-83)||(37228600-37228673)
chr2 (23-95)||(4964784-4964856)
chr2 (31-91)||(37228499-37228559)
chr2 (10-91)||(4964671-4964752)
chr2 (10-95)||(37398808-37398893)
chr2 (23-92)||(45554567-45554636)
chr2 (23-95)||(41805887-41805959)
chr2 (1-84)||(24895272-24895355)
chr2 (26-92)||(37398928-37398994)
chr2 (26-95)||(11539420-11539489)
chr2 (38-83)||(25238284-25238329)
chr2 (26-95)||(40535104-40535173)
chr2 (27-91)||(6980235-6980299)
chr2 (23-95)||(12989188-12989260)
chr2 (23-95)||(18511320-18511392)
chr2 (2-50)||(21447197-21447245)
chr2 (23-95)||(26767872-26767944)
chr2 (65-97)||(29806200-29806232)
[»] chr7 (35 HSPs)
chr7 (1-93)||(26703436-26703528)
chr7 (1-95)||(13919872-13919966)
chr7 (1-95)||(19840879-19840973)
chr7 (10-101)||(37549615-37549706)
chr7 (4-95)||(14759738-14759829)
chr7 (3-91)||(25428477-25428565)
chr7 (23-94)||(19494450-19494521)
chr7 (23-94)||(22786149-22786220)
chr7 (10-83)||(26190004-26190077)
chr7 (1-86)||(45909548-45909633)
chr7 (23-91)||(13919781-13919849)
chr7 (23-92)||(25428590-25428659)
chr7 (23-95)||(26703551-26703621)
chr7 (23-95)||(17354638-17354710)
chr7 (23-95)||(33008101-33008173)
chr7 (24-86)||(23934021-23934083)
chr7 (38-95)||(27888410-27888467)
chr7 (23-100)||(32205071-32205145)
chr7 (26-75)||(14759660-14759709)
chr7 (1-86)||(24539126-24539211)
chr7 (23-95)||(22189936-22190008)
chr7 (23-83)||(31959968-31960028)
chr7 (23-94)||(45909453-45909525)
chr7 (4-55)||(17354561-17354612)
chr7 (3-86)||(17749788-17749871)
chr7 (1-47)||(21963172-21963218)
chr7 (42-95)||(6580135-6580188)
chr7 (26-95)||(10619506-10619574)
chr7 (23-92)||(19422945-19423014)
chr7 (24-77)||(42887740-42887793)
chr7 (27-95)||(2520630-2520698)
chr7 (23-91)||(11824072-11824140)
chr7 (1-61)||(22786243-22786303)
chr7 (23-95)||(27888279-27888351)
chr7 (27-95)||(31502579-31502647)
[»] chr1 (29 HSPs)
chr1 (1-101)||(11430533-11430632)
chr1 (1-95)||(11135831-11135925)
chr1 (1-95)||(41095603-41095697)
chr1 (1-101)||(32848571-32848671)
chr1 (23-95)||(11135736-11135808)
chr1 (1-95)||(14093995-14094089)
chr1 (23-96)||(41095720-41095793)
chr1 (23-92)||(41917995-41918064)
chr1 (23-95)||(11430438-11430510)
chr1 (23-95)||(44739115-44739187)
chr1 (23-95)||(9165299-9165371)
chr1 (23-95)||(32848694-32848766)
chr1 (10-96)||(13388330-13388416)
chr1 (25-75)||(28109885-28109935)
chr1 (1-91)||(50773109-50773199)
chr1 (1-86)||(50424869-50424954)
chr1 (4-95)||(29418576-29418668)
chr1 (3-95)||(43832363-43832455)
chr1 (23-95)||(43851146-43851218)
chr1 (21-86)||(4578686-4578749)
chr1 (1-55)||(41918087-41918141)
chr1 (38-95)||(30678906-30678963)
chr1 (23-95)||(14094112-14094184)
chr1 (10-64)||(24436492-24436546)
chr1 (1-95)||(28109960-28110053)
chr1 (26-95)||(6133738-6133807)
chr1 (9-54)||(8665251-8665296)
chr1 (23-55)||(13388450-13388482)
chr1 (27-75)||(50308774-50308822)
[»] chr6 (16 HSPs)
chr6 (1-95)||(19090209-19090303)
chr6 (1-95)||(10060951-10061045)
chr6 (23-95)||(6531409-6531481)
chr6 (23-95)||(19090326-19090398)
chr6 (3-93)||(19737431-19737521)
chr6 (23-86)||(35128834-35128897)
chr6 (3-55)||(6992305-6992357)
chr6 (5-61)||(9940389-9940445)
chr6 (23-66)||(4595768-4595811)
chr6 (1-91)||(4595834-4595922)
chr6 (23-82)||(19737546-19737605)
chr6 (1-92)||(35128724-35128811)
chr6 (23-95)||(373396-373468)
chr6 (23-95)||(10060856-10060928)
chr6 (23-95)||(445815-445887)
chr6 (23-91)||(34905337-34905405)
[»] chr5 (24 HSPs)
chr5 (1-95)||(42224585-42224679)
chr5 (3-95)||(26072197-26072289)
chr5 (23-95)||(40971564-40971636)
chr5 (1-95)||(24915147-24915239)
chr5 (1-95)||(24990978-24991070)
chr5 (23-95)||(42224702-42224774)
chr5 (4-95)||(17568696-17568787)
chr5 (10-95)||(4959379-4959464)
chr5 (23-92)||(32050421-32050490)
chr5 (23-95)||(4959275-4959347)
chr5 (3-95)||(8912604-8912698)
chr5 (1-86)||(13456170-13456253)
chr5 (1-91)||(34818278-34818368)
chr5 (23-95)||(6263995-6264067)
chr5 (3-95)||(40971447-40971539)
chr5 (26-94)||(6263881-6263949)
chr5 (26-75)||(17568816-17568865)
chr5 (38-95)||(34368488-34368545)
chr5 (39-95)||(2443683-2443739)
chr5 (28-91)||(28611777-28611840)
chr5 (23-95)||(13456276-13456346)
chr5 (39-91)||(8912511-8912563)
chr5 (23-83)||(26072112-26072172)
chr5 (2-54)||(27726833-27726885)
[»] chr3 (28 HSPs)
chr3 (1-95)||(37600124-37600218)
chr3 (1-86)||(24748913-24748998)
chr3 (1-97)||(54140885-54140981)
chr3 (1-92)||(38928006-38928097)
chr3 (1-99)||(10769715-10769813)
chr3 (1-95)||(29775136-29775228)
chr3 (23-95)||(37600241-37600313)
chr3 (23-95)||(21232633-21232705)
chr3 (23-86)||(46237157-46237220)
chr3 (23-95)||(10769836-10769908)
chr3 (23-95)||(28529250-28529322)
chr3 (23-83)||(54141004-54141064)
chr3 (23-95)||(37776814-37776886)
chr3 (25-95)||(27243042-27243112)
chr3 (1-95)||(27243137-27243231)
chr3 (26-95)||(46160946-46161013)
chr3 (23-95)||(20493556-20493628)
chr3 (23-61)||(138794-138832)
chr3 (23-61)||(357791-357829)
chr3 (23-97)||(5452171-5452245)
chr3 (23-97)||(29389124-29389198)
chr3 (23-92)||(30624633-30624700)
chr3 (23-93)||(38928120-38928190)
chr3 (27-97)||(52951475-52951545)
chr3 (23-72)||(43657107-43657156)
chr3 (39-95)||(46450064-46450118)
chr3 (23-91)||(40715973-40716041)
chr3 (1-45)||(46237090-46237134)
[»] chr4 (23 HSPs)
chr4 (14-86)||(51206148-51206220)
chr4 (1-95)||(13070032-13070126)
chr4 (1-95)||(44832555-44832649)
chr4 (26-95)||(42862415-42862484)
chr4 (23-95)||(42862532-42862604)
chr4 (22-92)||(37315673-37315743)
chr4 (26-95)||(40812034-40812103)
chr4 (23-91)||(8108957-8109025)
chr4 (23-95)||(13069938-13070009)
chr4 (23-86)||(2088776-2088839)
chr4 (23-86)||(16178590-16178652)
chr4 (10-92)||(2187811-2187893)
chr4 (1-91)||(39016755-39016845)
chr4 (23-92)||(43771126-43771195)
chr4 (26-94)||(47237855-47237923)
chr4 (25-91)||(2187926-2187992)
chr4 (23-91)||(37315564-37315629)
chr4 (38-98)||(20225467-20225525)
chr4 (1-52)||(16178675-16178726)
chr4 (26-95)||(40991703-40991772)
chr4 (23-95)||(34129511-34129583)
chr4 (23-95)||(44832460-44832532)
chr4 (23-95)||(50571861-50571933)
[»] chr8 (22 HSPs)
chr8 (4-84)||(1205922-1206002)
chr8 (3-66)||(33417776-33417839)
chr8 (1-80)||(35689572-35689651)
chr8 (5-86)||(7599425-7599506)
chr8 (23-91)||(35689481-35689549)
chr8 (10-95)||(13407318-13407403)
chr8 (23-95)||(7599533-7599605)
chr8 (39-86)||(1205833-1205880)
chr8 (1-91)||(28211885-28211974)
chr8 (10-95)||(34303432-34303517)
chr8 (2-86)||(12212128-12212212)
chr8 (2-86)||(12456556-12456640)
chr8 (1-95)||(23142812-23142903)
chr8 (38-95)||(8914768-8914825)
chr8 (21-54)||(16441842-16441875)
chr8 (26-91)||(23142937-23143002)
chr8 (38-83)||(24055932-24055977)
chr8 (21-54)||(44709309-44709342)
chr8 (23-95)||(1977284-1977356)
chr8 (23-83)||(11310477-11310537)
chr8 (23-95)||(31301112-31301184)
chr8 (23-91)||(32072098-32072166)
[»] scaffold0054 (1 HSPs)
scaffold0054 (10-95)||(30907-30992)
[»] scaffold0099 (1 HSPs)
scaffold0099 (16-61)||(27421-27467)


Alignment Details
Target: chr2 (Bit Score: 67; Significance: 7e-30; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 37719925 - 37719831
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||| | ||||||||||||||| |||||||| ||||||||    
T  37719925 tccatttctaaagtgtatgtcctacattgatttcatccaataaaagagtgagtgctagaaagagtgctcaaaagagaatgttgctagcattcctc 37719831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 42182981 - 42183075
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||| |||||||| |||||||||||||||||| |||||||||||| |||||  |||| |||| ||||||||||||||| ||| ||||||||    
T  42182981 tccatttccaaagtgtaggtcctacattgatttcacccaataaaagagttagtgccggagagagtgttcaaaagagagtgttactagcattcctc 42183075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 1110290 - 1110383
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcct 94  Q
    |||||||| ||||| ||||||||||||||||||||| |||||||||||||| ||  ||| | ||||||||||| ||||||||||||| ||||||    
T  1110290 tccatttccaaagtatatgtcctacattgatttcacccaataaaagagtgaatgttagaaagagtgctcaaaaaagagtgttgctacaattcct 1110383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 42182958 - 42182889
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 92  Q
    |||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||| |||||    
T  42182958 tacattgatttcacccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattc 42182889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 28898148 - 28898220
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||| |||||||||||||||||| ||||| ||||||||||| |||||||||||| ||||||||    
T  28898148 tacattgatttcacccaataaaagagtgagtgctagagagagtgctcaaaaaagagtgttgctagcattcctc 28898220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 20951686 - 20951603
Alignment:
Q  10 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||| |||||||||||||||||| |||||||||| | ||||| ||||  |||||||||||||||||||||||| ||||||||    
T  20951686 aaagtgtaggtcctacattgatttcacccaataaaagaataagtgctagag--agtgctcaaaagagagtgttgctagcattcctc 20951603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 27969000 - 27968919
Alignment:
Q  10 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    |||||||| |||||||| | ||||||| |||||||||||||||||| ||||| ||| |||||||||||||||||||| ||||    
T  27969000 aaagtgtaggtcctacactaatttcacccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatt 27968919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 28091587 - 28091668
Alignment:
Q  10 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    |||||||| |||||||| | ||||||| |||||||||||||||||| ||||| ||| |||||||||||||||||||| ||||    
T  28091587 aaagtgtaggtcctacactaatttcacccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatt 28091668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 28101819 - 28101900
Alignment:
Q  10 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    |||||||| |||||||| | ||||||| |||||||||||||||||| ||||| ||| |||||||||||||||||||| ||||    
T  28101819 aaagtgtaggtcctacactaatttcacccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatt 28101900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 28898123 - 28898034
Alignment:
Q  3 catttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 92  Q
    |||||| ||||||||  ||||||||||||||||  |||||||||||||||||| | ||| ||| |||||||||||||||||||| |||||    
T  28898123 catttccaaagtgtagatcctacattgatttcatccaataaaagagtgagtgctaaagagagtactcaaaagagagtgttgctagcattc 28898034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 1107107 - 1107039
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    |||||||||||||| ||||||||||||| |||| ||||| |||||||||||||||||||||||| ||||    
T  1107107 tacattgatttcacccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgctaacatt 1107039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 1110267 - 1110195
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||||||||||||||||||||||||||||||  ||||| | ||||| |||||||||||||||| ||||||||    
T  1110267 tacattgatttcactcaataaaagagtgagtgttagagagaatgctcgaaagagagtgttgctagcattcctc 1110195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 15508983 - 15508911
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||||||||||||||||||||||||||||||  ||| | |||| ||||||||||||||||||| ||||||||    
T  15508983 tacattgatttcactcaataaaagagtgagtgttagaaagagtgttcaaaagagagtgttgctaacattcctc 15508911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 31395556 - 31395628
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||| ||||||| |||||||||| | ||| |||||||||||||||||||||||| ||||||||    
T  31395556 tacattgatttcacccaataaaggagtgagtgctaaagagagtgctcaaaagagagtgttgctaacattcctc 31395628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 15509006 - 15509100
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||| ||||||||  ||||||||||||||||| |||| ||||||| ||||  | ||| |||||| ||||||||||||||||| ||||||||    
T  15509006 tccatttccaaagtgtagatcctacattgatttcacccaattaaagagtaagtgatatagagagtgctaaaaagagagtgttgctaacattcctc 15509100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 37228600 - 37228673
Alignment:
Q  10 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttg 83  Q
    |||||| | |||||||||||||||||| |||||||| ||||||||| ||| | |||||||||||||||||||||    
T  37228600 aaagtgcaggtcctacattgatttcacccaataaaaaagtgagtgctagaaagagtgctcaaaagagagtgttg 37228673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 4964784 - 4964856
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||| |||||||| ||||||||| ||||| ||| ||||||||||| |||||||| ||||||||    
T  4964784 tacattgatttcacccaataaaaaagtgagtgctagagagagtactcaaaagagaatgttgctagcattcctc 4964856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 37228559 - 37228499
Alignment:
Q  31 tttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    |||||| |||||||||||||||||| ||||| |||||||||||||||||||||||| ||||    
T  37228559 tttcacccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 37228499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 4964752 - 4964671
Alignment:
Q  10 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    |||||||| ||||||||||||| | |  |||||||||||||||||| ||||| |||  |||||||||||| |||||| ||||    
T  4964752 aaagtgtaggtcctacattgatcttatccaataaaagagtgagtgctagagagagtattcaaaagagagtattgctagcatt 4964671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 37398893 - 37398808
Alignment:
Q  10 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||| ||||||||| |||||||  |||||||| ||| ||||  ||||| | ||||||||| |||||||||||| ||||||||    
T  37398893 aaagtgtaggtcctacatggatttcatccaataaaaaagtaagtgttagagagaatgctcaaaaaagagtgttgctagcattcctc 37398808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 45554636 - 45554567
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 92  Q
    |||||||||||||  |||||||||||||||||| ||||| |||| | ||||| ||||||||||| |||||    
T  45554636 tacattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcattc 45554567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 41805887 - 41805959
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||||||||| |  |||||||||||||||||  | ||||||||  ||||| |||||||||||| ||||||||    
T  41805887 tacattgattttatccaataaaagagtgagtgttaaagaaagtgtccaaaatagagtgttgctagcattcctc 41805959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 24895355 - 24895272
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgc 84  Q
    |||||||| |||||||||| || |||||||||| || |||| ||||||||||||  ||||| |||   |||||||||| |||||    
T  24895355 tccatttccaaagtgtatgacccacattgatttaacccaatgaaagagtgagtgttagagagagtatccaaaagagagagttgc 24895272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 37398928 - 37398994
Alignment:
Q  26 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 92  Q
    |||||||||||||||||||||| |||||   ||||| |||||| |||| ||||||||| || |||||    
T  37398928 attgatttcactcaataaaagattgagtattagagagagtgcttaaaatagagtgttgttagcattc 37398994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 11539489 - 11539420
Alignment:
Q  26 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||||||||  |||||||||||||||||| ||| | |||| ||||||  |||||||| || ||||||||    
T  11539489 attgatttcatccaataaaagagtgagtgctagaaagagtgttcaaaaatgagtgttgttagcattcctc 11539420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 25238329 - 25238284
Alignment:
Q  38 caataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttg 83  Q
    |||||||| ||||||||| |||||||||| | ||||||||||||||    
T  25238329 caataaaaaagtgagtgctagagaaagtgtttaaaagagagtgttg 25238284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 40535104 - 40535173
Alignment:
Q  26 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||| || |||||||||||||||||  |||||  |||||| ||||| ||||||| || ||||||||    
T  40535104 attgattttacccaataaaagagtgagtgttagagagggtgctcgaaagatagtgttgttagcattcctc 40535173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 6980235 - 6980299
Alignment:
Q  27 ttgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    |||||||||  |||||||||||||||||| ||||| |||| | ||||| || |||||||| ||||    
T  6980235 ttgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgaatgttgctagcatt 6980299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 12989260 - 12989188
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||  |||| ||||||||||||  | ||| |||| | ||||| ||||||||||| ||||||||    
T  12989260 tacattgatttcatccaatgaaagagtgagtgagaaagagagtgttgaaaagtgagtgttgctagcattcctc 12989188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 18511320 - 18511392
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||||||||| |  |||||||||||||||||  || || |||| | ||||| ||||||||||| ||||||||    
T  18511320 tacattgattttatccaataaaagagtgagtgatagtgagagtgttaaaaagtgagtgttgctagcattcctc 18511392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 21447197 - 21447245
Alignment:
Q  2 ccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtg 50  Q
    ||||||| |||||||| | || ||||||||||||| |||||||||||||    
T  21447197 ccatttccaaagtgtaagacccacattgatttcacacaataaaagagtg 21447245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 26767872 - 26767944
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||  || ||||||||| ||||| ||||| | || | ||||| ||||||||||| ||||||||    
T  26767872 tacattgatttcatccagtaaaagagtaagtgctagagagaatgttgaaaagtgagtgttgctagcattcctc 26767944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 29806200 - 29806232
Alignment:
Q  65 tgctcaaaagagagtgttgctaccattcctcct 97  Q
    |||||||||||||||||||||| ||||||||||    
T  29806200 tgctcaaaagagagtgttgctaacattcctcct 29806232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 26703528 - 26703436
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcc 93  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||    
T  26703528 tccatttctaaagtgtaggtcctacatttatttcacccaataaaagagtgagtgctagagagagtgctcagaagagagtgttgctagcattcc 26703436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 13919872 - 13919966
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||  |||||||| |||||||||||||||||| ||||||| |||||||||| ||||| |||||||||||||||||||||||| ||||||||    
T  13919872 tccattttcaaagtgtaggtcctacattgatttcacccaataaatgagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctc 13919966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 19840973 - 19840879
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||| ||||| ||||||||||| |||||||||||| ||||||||    
T  19840973 tccatttccaaagtgtaggtcctatattgatttcacccaataaaagagtgagtgctagagagagtgctcaaaatagagtgttgctagcattcctc 19840879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 37549706 - 37549615
Alignment:
Q  10 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctccttatc 101  Q
    |||||||| |||||||||||| ||||  |||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||| |||||    
T  37549706 aaagtgtaggtcctacattgaattcaaccaataaaagagtaagtgctagagaaagtgctcaaaagagagtgttgctagcattcctctttatc 37549615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 14759738 - 14759829
Alignment:
Q  4 atttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||| |||||||| |||||||||| ||||||  ||||||||||||| |||| || || |||||||||||||||||||||||| ||||||||    
T  14759738 atttccaaagtgtaggtcctacattaatttcatccaataaaagagtgggtgctagggagagtgctcaaaagagagtgttgctagcattcctc 14759829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 25428565 - 25428477
Alignment:
Q  3 catttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    |||||| ||||||||  |||||||||||||| |  |||||||||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  25428565 catttccaaagtgtagatcctacattgattttatccaataaaagagtgagtgctaaagagagtgctcaaaagagagtgttgctatcatt 25428477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 19494450 - 19494521
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcct 94  Q
    |||||||||||||| |||||||||||||||| | ||||||||| |||||||||||||| ||||| |||||||    
T  19494450 tacattgatttcacccaataaaagagtgagtactagagaaagtactcaaaagagagtgctgctagcattcct 19494521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 22786220 - 22786149
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcct 94  Q
    ||||||||||||||  ||||||| ||||||||| ||||| |||||||||||||||||||||||| |||||||    
T  22786220 tacattgatttcacctaataaaaaagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcct 22786149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 26190004 - 26190077
Alignment:
Q  10 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttg 83  Q
    |||||||| ||||||| ||||||| || |||||||||||||||||  |||||||||| ||||||||||||||||    
T  26190004 aaagtgtaggtcctacgttgattttacccaataaaagagtgagtgttagagaaagtgttcaaaagagagtgttg 26190077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 45909548 - 45909633
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 86  Q
    |||||||| ||| |||| ||||||||||||||| || |||||||||||||||||  ||||| |||  |||||||||||||||||||    
T  45909548 tccatttccaaattgtaggtcctacattgattttacccaataaaagagtgagtgttagagagagtattcaaaagagagtgttgcta 45909633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 13919849 - 13919781
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    |||||||||||||| ||||||| ||| |||||| ||||| |||||||||||||||||||||||| ||||    
T  13919849 tacattgatttcacccaataaatgagcgagtgctagagagagtgctcaaaagagagtgttgctagcatt 13919781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 25428590 - 25428659
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 92  Q
    |||||||||||||| |||||||||||||||| | | | | |||||||||||||||||||||||| |||||    
T  25428590 tacattgatttcacacaataaaagagtgagtactaaaaagagtgctcaaaagagagtgttgctagcattc 25428659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 26703551 - 26703621
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||| |||||||||||||||||| ||||| | ||||||||  |||||||||||| ||||||||    
T  26703551 tacattgatttcacccaataaaagagtgagtgctagagagaatgctcaaa--agagtgttgctagcattcctc 26703621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 17354638 - 17354710
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||  |||||||||| ||||||  ||||| ||||||||||| |||||||||||| ||||||||    
T  17354638 tacattgatttcatccaataaaagaatgagtgttagagagagtgctcaaaaaagagtgttgctagcattcctc 17354710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 33008173 - 33008101
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||| ||||||||  |||||||||||||||||| ||||| |||| ||||||| ||||||||||| ||||||||    
T  33008173 tacaatgatttcatccaataaaagagtgagtgctagagatagtgttcaaaagtgagtgttgctagcattcctc 33008101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 23934021 - 23934083
Alignment:
Q  24 acattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 86  Q
    |||||||||| || |||||||||||| ||||| ||| |||||||| |||||||||||||||||    
T  23934021 acattgattttacccaataaaagagtaagtgctagacaaagtgcttaaaagagagtgttgcta 23934083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 27888410 - 27888467
Alignment:
Q  38 caataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||| ||||||||||  ||||| |||||||||||||||||||||||| ||||||||    
T  27888410 caataagagagtgagtgttagagagagtgctcaaaagagagtgttgctagcattcctc 27888467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 32205145 - 32205071
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctccttat 100  Q
    |||||||||||||  ||||||||||||||||   ||||| |||| ||||||| ||||||||||| |||||||| ||||    
T  32205145 tacattgatttcatccaataaaagagtgagt---agagagagtgttcaaaagtgagtgttgctagcattcctctttat 32205071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 14759709 - 14759660
Alignment:
Q  26 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaaga 75  Q
    |||||||||||||||||||||||||||||| || || ||| |||||||||    
T  14759709 attgatttcactcaataaaagagtgagtgctagggagagtactcaaaaga 14759660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 24539211 - 24539126
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 86  Q
    |||||||| ||| |||||| || |||||||||| || |||| | ||||||||||  ||||| ||||  ||||||||||||||||||    
T  24539211 tccatttccaaaatgtatgacccacattgatttaacccaatgagagagtgagtgttagagagagtgtccaaaagagagtgttgcta 24539126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 22190008 - 22189936
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||  |||||||||||||||||| ||||| |||| | ||||  ||||||| ||| ||||||||    
T  22190008 tacattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaaatgagtgtttctagcattcctc 22189936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 31959968 - 31960028
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttg 83  Q
    |||||| ||||||  |||||||  ||||||||| ||||| |||||||||||||||||||||    
T  31959968 tacattaatttcatccaataaataagtgagtgctagagagagtgctcaaaagagagtgttg 31960028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 45909525 - 45909453
Alignment:
Q  23 tacattgatttcactcaataaaa-gagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcct 94  Q
    |||||||||||||| |||||||| |||||| ||| || || ||||||||||||| ||||||| || |||||||    
T  45909525 tacattgatttcacccaataaaaagagtgaatgctagggagagtgctcaaaagatagtgttgatagcattcct 45909453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 17354612 - 17354561
Alignment:
Q  4 atttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgc 55  Q
    ||||| |||||||| ||||||||||||||| || |||||||| |||||||||    
T  17354612 atttccaaagtgtaggtcctacattgattttacccaataaaaaagtgagtgc 17354561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 17749788 - 17749871
Alignment:
Q  3 catttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 86  Q
    |||||| ||| |||||| || |||||||||| || |||| | ||||||||||  ||||| ||||  ||||||||||||||||||    
T  17749788 catttccaaaatgtatgacccacattgatttaacccaatgagagagtgagtgttagagagagtgtccaaaagagagtgttgcta 17749871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21963218 - 21963172
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 47  Q
    |||||||| ||||||||  ||||||||||||||||| ||||||||||    
T  21963218 tccatttccaaagtgtagatcctacattgatttcacccaataaaaga 21963172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 6580135 - 6580188
Alignment:
Q  42 aaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||| ||||||||||||| | |||| | ||||| ||||||||||||||||||||    
T  6580135 aaaaaagtgagtgcaagaaagagtgttgaaaagtgagtgttgctaccattcctc 6580188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 10619506 - 10619574
Alignment:
Q  26 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||||||||| ||| || |||||  |||| ||||| |||| ||||||||||||||||||| ||||||||    
T  10619506 attgatttcacccaa-aagagagtaggtgctagagagagtgatcaaaagagagtgttgctagcattcctc 10619574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 19422945 - 19423014
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 92  Q
    |||||||||||||  |||| ||||||||||||  ||||| |||| | ||||| ||||||||||| |||||    
T  19422945 tacattgatttcatccaatgaaagagtgagtgatagagagagtgttgaaaagtgagtgttgctaacattc 19423014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 42887740 - 42887793
Alignment:
Q  24 acattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagaga 77  Q
    |||||| |||||||||||||||||| |||||| | ||| |||| ||||||||||    
T  42887740 acattggtttcactcaataaaagagcgagtgctaaagagagtgatcaaaagaga 42887793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 2520698 - 2520630
Alignment:
Q  27 ttgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||| |||||||||||||||||   |||| |||| | ||||||||||||| ||| || |||||    
T  2520698 ttgatttcacccaataaaagagtgagtgttggagagagtgttgaaaagagagtgttcctagcactcctc 2520630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 11824140 - 11824072
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    |||||||||||||  |||||||||||||||||| ||||| || | | ||||  ||||||||||| ||||    
T  11824140 tacattgatttcatccaataaaagagtgagtgctagagagagcgttgaaaaatgagtgttgctaacatt 11824072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22786243 - 22786303
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagaga 61  Q
    |||||||| |||||||| ||  ||||||||||||||   |||||||||||| |||||||||    
T  22786243 tccatttccaaagtgtaggttatacattgatttcacctgataaaagagtgattgcaagaga 22786303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 27888351 - 27888279
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||||||||| |  |||| | || |||||||  ||||| |||||||||||| ||||||||||| ||||||||    
T  27888351 tacattgattttatccaatgagagggtgagtgttagagagagtgctcaaaagtgagtgttgctagcattcctc 27888279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 31502579 - 31502647
Alignment:
Q  27 ttgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||  |||||||||||||||||  ||||| | || | ||||| ||||||||||| ||||||||    
T  31502579 ttgatttcatccaataaaagagtgagtgttagagagactgttgaaaagtgagtgttgctagcattcctc 31502647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 11430533 - 11430632
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctccttat 100  Q
    |||||||| |||||||| |||||||||||| ||||| |||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||| ||||    
T  11430533 tccatttccaaagtgtaggtcctacattgaattcac-caataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctctttat 11430631  T

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Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 11135831 - 11135925
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||| |||||||| |||||||||||||||||| |||||||||||||||||| ||||| ||| |||||||||||||||||||| ||| ||||    
T  11135831 tccatttccaaagtgtaggtcctacattgatttcacccaataaaagagtgagtgctagagagagtcctcaaaagagagtgttgctagcatccctc 11135925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 41095697 - 41095603
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||  |||||||| |||||||||||||||||| |||||||  ||||||||| ||||| |||||||||||||||||||||||| ||||||||    
T  41095697 tccattttcaaagtgtaggtcctacattgatttcacccaataaataagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctc 41095603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 32848671 - 32848571
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctccttat 100  Q
    |||||||  |||||||| |||||||||||| ||||  |||||||||||| ||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  32848671 tccattttcaaagtgtaggtcctacattgaattcaaccaataaaagagtaagtgctagagaaagtgctcaaaagagagtgttgctagcagtcctctttat 32848572  T
Q  101 c 101  Q
    |    
T  32848571 c 32848571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 11135808 - 11135736
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||| |||||||| ||||||||| ||||| |||||||||||||||||||||||| ||||||||    
T  11135808 tacattgatttcacccaataaaatagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctc 11135736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 14094089 - 14093995
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||| |||||||| ||||||||||||||||||||||| ||| ||||||||  | | | |||| ||||||||||||||||||| ||||||||    
T  14094089 tccatttccaaagtgtaggtcctacattgatttcactcaatcaaaaagtgagtgttacaaagagtgttcaaaagagagtgttgctaacattcctc 14093995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 41095720 - 41095793
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctcc 96  Q
    |||||||||||||| ||||||| |||||||||| ||||| |||||||||||||||||||||||| |||| ||||    
T  41095720 tacattgatttcacccaataaatgagtgagtgctagagagagtgctcaaaagagagtgttgctagcatttctcc 41095793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 41918064 - 41917995
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 92  Q
    |||||||||||||| |||||||||||||||||| |||||  ||||||||||||||||||||||| |||||    
T  41918064 tacattgatttcacccaataaaagagtgagtgctagagagggtgctcaaaagagagtgttgctagcattc 41917995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 11430510 - 11430438
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||| |||||||||||||||||| ||| | ||||||||||||||||||||| || ||||||||    
T  11430510 tacattgatttcacccaataaaagagtgagtgctagaaagagtgctcaaaagagagtgttgttagcattcctc 11430438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 44739187 - 44739115
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||| ||||||||||| |||||||||||||| ||||| |||| ||||||||||||||||||| ||||||||    
T  44739187 tacattaatttcactcaagaaaagagtgagtgctagagagagtgttcaaaagagagtgttgctaacattcctc 44739115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 9165371 - 9165299
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||| |||||||||||||||||||||| | |||| |||||||||||||| | || ||||||||    
T  9165371 tacattgatttcacccaataaaagagtgagtgcaagatagagtggtcaaaagagagtgtggatagcattcctc 9165299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 32848694 - 32848766
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||| ||||||||| |||||||||||||||||| ||||| |||| |||||||||||||||| || ||||||||    
T  32848694 tacaatgatttcacccaataaaagagtgagtgctagagagagtgttcaaaagagagtgttgttagcattcctc 32848766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 13388416 - 13388330
Alignment:
Q  10 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctcc 96  Q
    |||||||| || ||||||||||||||  |||||||| ||||||||  ||||| |||  ||||||||||||||||||| |||||||||    
T  13388416 aaagtgtaggtactacattgatttcatccaataaaaaagtgagtgttagagagagtattcaaaagagagtgttgctagcattcctcc 13388330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 28109935 - 28109885
Alignment:
Q  25 cattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaaga 75  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||||||||    
T  28109935 cattgatttcacccaataaaaaagtgagtgctagagaaagtgctcaaaaga 28109885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 50773199 - 50773109
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    |||||||| ||| | || |||||||||| |||| || |||||||||| ||||||| ||||| |||| |||||||||||| |||||| ||||    
T  50773199 tccatttccaaaatataggtcctacattaattttacccaataaaagaatgagtgctagagagagtgttcaaaagagagtattgctagcatt 50773109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 50424954 - 50424869
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 86  Q
    |||||||| |||||||||| || |||||||||| || |||||||| ||||| ||  ||||| |||||  |||||||||||||||||    
T  50424954 tccatttccaaagtgtatgacccacattgatttaacccaataaaaaagtgaatgttagagagagtgcctaaaagagagtgttgcta 50424869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 29418576 - 29418668
Alignment:
Q  4 atttctaaagtgtatgtcctacattgatttcactcaat-aaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||| ||||||||  ||||||||||||||||| |||| |||| ||||||||  | ||| |||| |||||||||| |||||||| ||||||||    
T  29418576 atttccaaagtgtagatcctacattgatttcacccaataaaaaaagtgagtgatatagagagtgatcaaaagagactgttgctagcattcctc 29418668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 43832363 - 43832455
Alignment:
Q  3 catttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||| ||||||||  ||||||||||||||| |  ||||||||||||| ||| ||| | |||| |||||||||||| ||| || ||||||||    
T  43832363 catttccaaagtgtagatcctacattgatttcgccgaataaaagagtgaatgctagaaagagtgttcaaaagagagttttgatatcattcctc 43832455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 43851146 - 43851218
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||| ||||||| |||||||| | |||||  | ||| ||||||||||||||||| ||||||||    
T  43851146 tacattgatttcacccaataaatgagtgagtactagagagtgcgcttaaaagagagtgttgctaacattcctc 43851218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 4578686 - 4578749
Alignment:
Q  21 cctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 86  Q
    |||||||||||||||| |||||||||||||||||  ||||  |||| | |||||||||||||||||    
T  4578686 cctacattgatttcacccaataaaagagtgagtgttagag--agtgttgaaaagagagtgttgcta 4578749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41918087 - 41918141
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgc 55  Q
    |||||||  |||||||| ||||||||||||||| || ||||||||||||||||||    
T  41918087 tccattttcaaagtgtaggtcctacattgattttacccaataaaagagtgagtgc 41918141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 30678963 - 30678906
Alignment:
Q  38 caataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||| ||||||||||  ||||| ||||||||||| |||||||||||| ||||||||    
T  30678963 caataagagagtgagtgttagagagagtgctcaaaaaagagtgttgctagcattcctc 30678906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 14094112 - 14094184
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||| |||||||| |||||||||  |||| |||| |||||||| | ||| |||| ||||||||    
T  14094112 tacattgatttcacccaataaaaaagtgagtgctggagagagtgttcaaaagataatgtcgctagcattcctc 14094184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 24436546 - 24436492
Alignment:
Q  10 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaag 64  Q
    |||||||  |||||||||||||||||| ||||||||||| |||||  ||||||||    
T  24436546 aaagtgtgggtcctacattgatttcacccaataaaagagggagtgttagagaaag 24436492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 28109960 - 28110053
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||| ||||||||  ||||| | ||||||||  |||||||| |||||||   ||||||||| || ||||||||||||| ||| ||||||||    
T  28109960 tccatttc-aaagtgtagatcctagaatgatttcatccaataaaaaagtgagtattagagaaagtacttaaaagagagtgttcctaacattcctc 28110053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 6133738 - 6133807
Alignment:
Q  26 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||||||||  ||||||||| |||||||| ||||| | || | ||||| ||||||||||| ||||||||    
T  6133738 attgatttcatccaataaaagggtgagtgctagagagattgttgaaaagtgagtgttgctagcattcctc 6133807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 8665296 - 8665251
Alignment:
Q  9 taaagtgtatgtcctacattgatttcactcaataaaagagtgagtg 54  Q
    ||||||||| |  |||||||||||||| ||||||||||||||||||    
T  8665296 taaagtgtaggatctacattgatttcattcaataaaagagtgagtg 8665251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 13388450 - 13388482
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgc 55  Q
    |||||||||||||| ||||||||||||||||||    
T  13388450 tacattgatttcacccaataaaagagtgagtgc 13388482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 50308822 - 50308774
Alignment:
Q  27 ttgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaaga 75  Q
    |||||||||| |||||||||||||||||| ||||| | |||| ||||||    
T  50308822 ttgatttcacccaataaaagagtgagtgctagagagaatgcttaaaaga 50308774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 19090303 - 19090209
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||| |||||||| |||||||||||| ||||  |||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||    
T  19090303 tccatttccaaagtgtaggtcctacattgaattcaaccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctc 19090209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 10060951 - 10061045
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||  |||||||| ||||||||||||| |||| |||||||| ||||||||  ||||| ||||||||||||||||||||||||  |||||||    
T  10060951 tccattttcaaagtgtaggtcctacattgatctcacccaataaaaaagtgagtgttagagagagtgctcaaaagagagtgttgctaatattcctc 10061045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 6531409 - 6531481
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||| ||||||||||||||||||  |||| ||| |||||||||||||||||||| ||||||||    
T  6531409 tacattgatttcacccaataaaagagtgagtgctggagagagtcctcaaaagagagtgttgctagcattcctc 6531481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 19090326 - 19090398
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||||| || ||||||||    
T  19090326 tacattgatttcacccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgttagcattcctc 19090398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 19737521 - 19737431
Alignment:
Q  3 catttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcc 93  Q
    |||||| |||||||| ||||||||||||||| |  |||||||||||||||||  ||||| | || ||||||||||||||||||| ||||||    
T  19737521 catttccaaagtgtaggtcctacattgatttgagccaataaaagagtgagtgatagagagaatgttcaaaagagagtgttgctagcattcc 19737431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 35128834 - 35128897
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 86  Q
    ||||||||||| || |||||||||||||| ||| ||||| |||| |||||||||||||||||||    
T  35128834 tacattgattttacccaataaaagagtgactgctagagagagtgttcaaaagagagtgttgcta 35128897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 6992357 - 6992305
Alignment:
Q  3 catttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgc 55  Q
    |||||| |||||||| ||||||||||||||| ||||||||||||| |||||||    
T  6992357 catttccaaagtgtaggtcctacattgattttactcaataaaagaatgagtgc 6992305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 9940445 - 9940389
Alignment:
Q  5 tttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagaga 61  Q
    |||| ||||||||  ||||||||||||||||| |||||||||||||||||| |||||    
T  9940445 tttccaaagtgtaaatcctacattgatttcacccaataaaagagtgagtgctagaga 9940389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 4595811 - 4595768
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtg 66  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||    
T  4595811 tacattgatttcactcaataaaagagtgagtgctagagagagtg 4595768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 4595834 - 4595922
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    |||||||  |||||||| |||||||||| |||||||  || |||||||||||||| | ||  ||| |||||||||||||||||||| ||||    
T  4595834 tccattttcaaagtgtaagtcctacattaatttcaccaaagaaaagagtgagtgctaaag--agttctcaaaagagagtgttgctagcatt 4595922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 19737546 - 19737605
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgtt 82  Q
    |||||||||||||| |||| ||||||||||||| ||||| ||||||||||| | ||||||    
T  19737546 tacattgatttcacccaattaaagagtgagtgctagagagagtgctcaaaataaagtgtt 19737605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 35128811 - 35128724
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 92  Q
    |||||||  |||||||| |||||||||||||||||| |||||||| | ||||||  |||||    |||||||||||||||||| || |||||    
T  35128811 tccattttcaaagtgtaggtcctacattgatttcacccaataaaaaaatgagtgttagaga----gctcaaaagagagtgttgttagcattc 35128724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 373468 - 373396
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||||||||| || |||||||| |||| |||| ||||| ||||||||||| ||| ||||| || ||||||||    
T  373468 tacattgattttacccaataaaaaagtgggtgctagagagagtgctcaaaaaagaatgttgttagcattcctc 373396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 10060928 - 10060856
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||||||||||||  ||||||||||||| ||  | | | |||| ||||||||||||||||||| ||||||||    
T  10060928 tacattgatttcacataataaaagagtgattgttataaagagtgttcaaaagagagtgttgctagcattcctc 10060856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 445887 - 445815
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||  |||||||| ||||||||| ||||| |||| | ||||  |||| |||||| ||||||||    
T  445887 tacattgatttcatccaataaaaaagtgagtgctagagatagtgttgaaaaatgagtattgctagcattcctc 445815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 34905405 - 34905337
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    |||||||||||||  |||||||||||||||||  ||||| |||| | ||||  ||||||||||| ||||    
T  34905405 tacattgatttcatccaataaaagagtgagtgttagagagagtgttgaaaaatgagtgttgctagcatt 34905337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 42224679 - 42224585
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||| |||||||| |||||||||||||||||| ||||||||||||||||||  |||| ||| |||||||||||||||||||| ||||||||    
T  42224679 tccatttccaaagtgtaggtcctacattgatttcacccaataaaagagtgagtgctggagagagttctcaaaagagagtgttgctagcattcctc 42224585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 26072197 - 26072289
Alignment:
Q  3 catttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||| |||||||| |||| |||||| |||||| |||||||||||||||||| ||||| | |||||||||||||||||||||| ||||||||    
T  26072197 catttccaaagtgtaggtcccacattgttttcacccaataaaagagtgagtgctagagagaatgctcaaaagagagtgttgctagcattcctc 26072289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 40971564 - 40971636
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| || ||||||||    
T  40971564 tacattgatttcactcaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgttagcattcctc 40971636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 24915147 - 24915239
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||  ||||||||||||||||||||||||||| |||||||||||||||||| ||||  |||||| |||||||||||||||||  |||||||    
T  24915147 tccattttcaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgctagag--agtgcttaaaagagagtgttgctagtattcctc 24915239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 24990978 - 24991070
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||  ||||||||||||||||||||||||||| |||||||||||||||||| ||||  |||||| |||||||||||||||||  |||||||    
T  24990978 tccattttcaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgctagag--agtgcttaaaagagagtgttgctagtattcctc 24991070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 42224702 - 42224774
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||||||||||||  ||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||    
T  42224702 tacattgatttcacctaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctc 42224774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 17568787 - 17568696
Alignment:
Q  4 atttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||| |||||||| |||||||||| ||||||  ||||||||||||| |||| || || |||||||||||||||||||||||| ||||||||    
T  17568787 atttccaaagtgtaggtcctacattaatttcatccaataaaagagtgggtgctagggagagtgctcaaaagagagtgttgctagcattcctc 17568696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 4959379 - 4959464
Alignment:
Q  10 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||| ||  |||||||||||| | |||||||||||||||||| ||||| |||||||||||||||||||| ||| || |||||    
T  4959379 aaagtgtaggtgatacattgatttcccccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttactagcactcctc 4959464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 32050421 - 32050490
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 92  Q
    |||||||||||||| |||||||| ||||||||| ||||| | |||||||||||||||||||||| |||||    
T  32050421 tacattgatttcacccaataaaaaagtgagtgctagagagaatgctcaaaagagagtgttgctagcattc 32050490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 4959347 - 4959275
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||| ||||||||||||| ||   ||||| |||||||||||||||||||||||| ||||||||    
T  4959347 tacattgatttcacccaataaaagagtgggtattagagagagtgctcaaaagagagtgttgctagcattcctc 4959275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 8912604 - 8912698
Alignment:
Q  3 catttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaa--gtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||| |||||||||||| || |||||||||||  ||||||||||||||||  ||||| |  |||||||||||||| |||||||| ||||||||    
T  8912604 catttccaaagtgtatgtcatatattgatttcacctaataaaagagtgagtgatagagagagtgtgctcaaaagagactgttgctaacattcctc 8912698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 13456253 - 13456170
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 86  Q
    |||||||  |||||||| | ||||||||||||||||  ||||||||||||||||| ||||  ||| ||||||||||||||||||||    
T  13456253 tccattttcaaagtgtaggacctacattgatttcacctaataaaagagtgagtgctagag--agtactcaaaagagagtgttgcta 13456170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 34818278 - 34818368
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    |||||||||||||| || ||||||||||||||| ||  ||||||| ||||||||  ||||| ||||||||||||||| |||| ||| ||||    
T  34818278 tccatttctaaagtataggtcctacattgattttaccaaataaaaaagtgagtgttagagagagtgctcaaaagagaatgttcctagcatt 34818368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 6263995 - 6264067
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||| || ||||||||||||||| ||| | |||||| ||||||||||||||||| || |||||    
T  6263995 tacattgatttcacccactaaaagagtgagtgctagatagagtgcttaaaagagagtgttgctagcactcctc 6264067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 40971539 - 40971447
Alignment:
Q  3 catttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||| |||||||| ||| ||||||||||| || |||||||| ||||||||  ||| | |||| ||||||||||||||||||| || |||||    
T  40971539 catttccaaagtgtaggtcttacattgattttacccaataaaatagtgagtgttagatagagtgttcaaaagagagtgttgctagcactcctc 40971447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 6263949 - 6263881
Alignment:
Q  26 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcct 94  Q
    |||||||| || ||||||| |||||||||  ||||| |||||||||||||||||||| ||| |||||||    
T  6263949 attgattttacccaataaaggagtgagtgatagagagagtgctcaaaagagagtgttactaacattcct 6263881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 17568816 - 17568865
Alignment:
Q  26 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaaga 75  Q
    |||||||||||||||||||||||||||||| || || ||| |||||||||    
T  17568816 attgatttcactcaataaaagagtgagtgctagggagagtactcaaaaga 17568865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 34368488 - 34368545
Alignment:
Q  38 caataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||| |||||| |||  ||||| |||||||||||||||||||||||| ||||||||    
T  34368488 caataagagagtgggtgacagagagagtgctcaaaagagagtgttgctagcattcctc 34368545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 2443739 - 2443683
Alignment:
Q  39 aataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||| |||| | ||| | |||||||||||||||||||||||| ||||||||    
T  2443739 aataaaagagcgagttctagacagagtgctcaaaagagagtgttgctagcattcctc 2443683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 28611840 - 28611777
Alignment:
Q  28 tgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    |||||| | |||||||||||||  |||  ||||| |||||||||||||||||||||||| ||||    
T  28611840 tgatttaaatcaataaaagagttggtgttagagagagtgctcaaaagagagtgttgctagcatt 28611777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 13456276 - 13456346
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||  | ||||||||||||||  || ||| ||||||||||||| |||| ||||| ||||||||    
T  13456276 tacattgatttcatccgataaaagagtgagt--aatagagagtgctcaaaagaaagtgctgctagcattcctc 13456346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 8912563 - 8912511
Alignment:
Q  39 aataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    ||||||||||||||||| ||| |||||| | ||||||||| ||||||| ||||    
T  8912563 aataaaagagtgagtgctagaaaaagtgtttaaaagagagcgttgctagcatt 8912511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 26072172 - 26072112
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttg 83  Q
    |||||||||||||| ||| |||||| |||||   ||| | |||||||||||||||||||||    
T  26072172 tacattgatttcacccaaaaaaagaatgagtattagaaagagtgctcaaaagagagtgttg 26072112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 27726885 - 27726833
Alignment:
Q  2 ccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtg 54  Q
    ||||||| |||||||| | || ||||| ||||||| |||||||||||||||||    
T  27726885 ccatttccaaagtgtaggacccacattaatttcacccaataaaagagtgagtg 27726833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 37600218 - 37600124
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||||||||||||||| |||||||||||| ||||  ||||||||||||| |||| ||||| |||||||||||||||||||||||| ||||||||    
T  37600218 tccatttctaaagtgtaggtcctacattgaattcaaccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgctagcattcctc 37600124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 24748998 - 24748913
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 86  Q
    ||||||||||||||||| |||||||||||||||||  |||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  24748998 tccatttctaaagtgtaggtcctacattgatttcatccaataaaagagtgagtgttagagagagtgctcaaaagagagtgttgcta 24748913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 54140981 - 54140885
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctcct 97  Q
    |||||||  |||||||| || ||||||||||||||  ||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  54140981 tccattttcaaagtgtaggttctacattgatttcatccaataaatgagtgagtgctagagaaagtgctcaaaagagagtgttgctagcattcctcct 54140885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 38928097 - 38928006
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 92  Q
    |||||||| |||||||| ||| |||||||||||||| |||||||||||||||||  |||||||||| ||||||||||||||||||| |||||    
T  38928097 tccatttccaaagtgtaggtcttacattgatttcacccaataaaagagtgagtgttagagaaagtgatcaaaagagagtgttgctagcattc 38928006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 10769813 - 10769715
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctcctta 99  Q
    ||||||||||||||||| |||||||||||||||||   ||||||||||| ||||| ||||| ||||||||||||||||||||  || ||||||||||||    
T  10769813 tccatttctaaagtgtaggtcctacattgatttcatcaaataaaagagtaagtgctagagagagtgctcaaaagagagtgttattagcattcctcctta 10769715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 29775228 - 29775136
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||| |||||||| ||||||| |||||||||| ||||||||||||  |||| ||||| |||||||||||||||||||||||| ||||||||    
T  29775228 tccatttccaaagtgtaggtcctaccttgatttcacccaataaaagagt--gtgctagagagagtgctcaaaagagagtgttgctagcattcctc 29775136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 37600241 - 37600313
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||||| || ||||||||    
T  37600241 tacattgatttcacccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgttagcattcctc 37600313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 21232633 - 21232705
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||| |||||||| | ||||||| | |||||||||||||||||| ||||||||| ||||||||    
T  21232633 tacattgatttcacccaataaaaaaatgagtgctaaagaaagtgctcaaaagagggtgttgctagcattcctc 21232705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 46237157 - 46237220
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 86  Q
    |||||||||||||  |||||||||||||| ||| ||||| ||||||||||||||||||||||||    
T  46237157 tacattgatttcatccaataaaagagtgattgctagagagagtgctcaaaagagagtgttgcta 46237220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 10769836 - 10769908
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||||||||||||  |||||||||||  |||  ||||| |||||||||||||||||||||||| ||||||||    
T  10769836 tacattgatttcaccaaataaaagagtcggtgatagagagagtgctcaaaagagagtgttgctagcattcctc 10769908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 28529322 - 28529250
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||  |||||||||||||||||| ||||| |||| | ||||| ||||||||||| ||||||||    
T  28529322 tacattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcattcctc 28529250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 54141004 - 54141064
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttg 83  Q
    |||||||||||||| ||||||| |||||||||| ||||| ||||||||||||| |||||||    
T  54141004 tacattgatttcacccaataaatgagtgagtgctagagagagtgctcaaaagaaagtgttg 54141064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 37776814 - 37776886
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||   |||||||||||||||||  ||||||||| | ||||| ||||||||||| ||||||||    
T  37776814 tacattgatttcatctaataaaagagtgagtgctggagaaagtgttgaaaagtgagtgttgctagcattcctc 37776886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 27243112 - 27243042
Alignment:
Q  25 cattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||||||| |  |||||||||||||||||  ||||| |||| ||||||||||||||||||| ||| ||||    
T  27243112 cattgattttatccaataaaagagtgagtgttagagagagtgttcaaaagagagtgttgctagcatccctc 27243042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 27243137 - 27243231
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||| |||||||||| || |||||||||| || |||| | |||||||||   ||| | |||| ||||||||||||||||||| || |||||    
T  27243137 tccatttccaaagtgtatgacccacattgatttaacccaatgagagagtgagtattagaaagagtgttcaaaagagagtgttgctagcactcctc 27243231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 46161013 - 46160946
Alignment:
Q  26 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||||||||  |||||||||||||||||| ||||  |||| ||||||| ||||||||||| ||||||||    
T  46161013 attgatttcatccaataaaagagtgagtgctagag--agtgttcaaaagtgagtgttgctagcattcctc 46160946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 20493556 - 20493628
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||  ||||||| |||||||||  ||||| |||| | ||||| ||||||||||| ||||||||    
T  20493556 tacattgatttcatccaataaatgagtgagtgttagagagagtgttgaaaagtgagtgttgctagcattcctc 20493628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 138832 - 138794
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagaga 61  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  138832 tacattgatttcattcaataaaagagtgagtgctagaga 138794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 357829 - 357791
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagaga 61  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  357829 tacattgatttccctcaataaaagagtgagtgctagaga 357791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 5452171 - 5452245
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctcct 97  Q
    |||||||||||||  |||||||||||||| ||  | ||| |||| | ||||| ||||||||||| ||||||||||    
T  5452171 tacattgatttcatccaataaaagagtgaatgttaaagagagtgttgaaaagtgagtgttgctagcattcctcct 5452245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 29389124 - 29389198
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctcct 97  Q
    ||||||||||| | ||||| ||||||||||||  | ||  |||||||||||| ||||||||||| ||||| ||||    
T  29389124 tacattgattttattcaatgaaagagtgagtgttaaagtgagtgctcaaaagtgagtgttgctagcattcatcct 29389198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 30624700 - 30624633
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 92  Q
    |||||| |||| | ||||||||||||||||||  |||||  ||||||||||| ||||||||||| |||||    
T  30624700 tacattaattttattcaataaaagagtgagtgttagaga--gtgctcaaaagtgagtgttgctagcattc 30624633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 38928120 - 38928190
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcc 93  Q
    ||||||||||| || |||||||||| ||| | | ||||| ||||| ||||||| |||||||||| ||||||    
T  38928120 tacattgattttacccaataaaagactgaatactagagatagtgcacaaaagatagtgttgctagcattcc 38928190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 52951475 - 52951545
Alignment:
Q  27 ttgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctcct 97  Q
    |||||||||  |||| | ||||||||||| ||||| |||| | ||||||||||||||||| || |||||||    
T  52951475 ttgatttcatccaatgagagagtgagtgctagagagagtgttaaaaagagagtgttgctagcactcctcct 52951545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 43657107 - 43657156
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaa 72  Q
    |||||||||||||   ||||||| ||||||||| ||||||||||||||||    
T  43657107 tacattgatttcatcaaataaaatagtgagtgctagagaaagtgctcaaa 43657156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 46450118 - 46450064
Alignment:
Q  39 aataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||||||||||||||| |||||  ||| ||||||| ||||||||||| ||||||||    
T  46450118 aataaaagagtgagtgctagaga--gtgttcaaaagtgagtgttgctagcattcctc 46450064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 40715973 - 40716041
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    |||||| |||||||   |||||||||||||||| ||||| |||| | ||||| ||||||||||| ||||    
T  40715973 tacattaatttcaccatataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctaacatt 40716041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 46237134 - 46237090
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaa 45  Q
    |||||||||||| |||| |||||||||||||||||  ||||||||    
T  46237134 tccatttctaaaatgtaggtcctacattgatttcatccaataaaa 46237090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 6e-24; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 51206148 - 51206220
Alignment:
Q  14 tgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 86  Q
    |||| |||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  51206148 tgtaggtcctacattgatttcacccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgcta 51206220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 13070032 - 13070126
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||  |||||||| ||||||||||||||| ||||||||||||||||||||  ||||||| || ||||||||||||||||||| || |||||    
T  13070032 tccattttcaaagtgtaggtcctacattgattttactcaataaaagagtgagtgttagagaaaatgttcaaaagagagtgttgctagcactcctc 13070126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 44832555 - 44832649
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||| |||||| | |||||||||||||||||| |||||||| | |||||||  |||| |||||||||||||||||||||||| ||||||||    
T  44832555 tccatttccaaagtgcaggtcctacattgatttcacccaataaaaaaatgagtgctggagagagtgctcaaaagagagtgttgctagcattcctc 44832649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 42862484 - 42862415
Alignment:
Q  26 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||||||||| |||||||||||||||||| ||| | |||||||||||||||||||||||| ||||||||    
T  42862484 attgatttcacccaataaaagagtgagtgctagatatagtgctcaaaagagagtgttgctagcattcctc 42862415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 42862532 - 42862604
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||  || ||||||||    
T  42862532 tacattgatttcacccaataaaaaagtgagtgctagagaaagtgctcaaaagagagtgttattagcattcctc 42862604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 37315673 - 37315743
Alignment:
Q  22 ctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 92  Q
    ||||||||||||||| |||||||||||||||||| |  || ||||||||||| |||||||||||| |||||    
T  37315673 ctacattgatttcacccaataaaagagtgagtgctaatgagagtgctcaaaaaagagtgttgctagcattc 37315743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 40812103 - 40812034
Alignment:
Q  26 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||||||||| |||||||||||||||||| ||||| |||| |||||| |||||||||||| ||| ||||    
T  40812103 attgatttcacccaataaaagagtgagtgctagagagagtgttcaaaaaagagtgttgctagcatacctc 40812034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 8109025 - 8108957
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    |||||||||||||| |||||||||||||||||| ||||| |||| | ||||| ||||||||||| ||||    
T  8109025 tacattgatttcacccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcatt 8108957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 13070009 - 13069938
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||| |||||||||||||||||| |||||  |||||||||||||||| || ||| ||||||||    
T  13070009 tacattgatttcac-caataaaagagtgagtgctagagagtgtgctcaaaagagagtattcctagcattcctc 13069938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 2088776 - 2088839
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 86  Q
    ||||||||||||||||||| ||||||||||||  ||||| ||| ||||||| ||||||||||||    
T  2088776 tacattgatttcactcaattaaagagtgagtgttagagagagtactcaaaaaagagtgttgcta 2088839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 16178652 - 16178590
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 86  Q
    |||||||||||||||||||||| |||||||||| ||||| ||||| ||||||||||| ||||||    
T  16178652 tacattgatttcactcaataaa-gagtgagtgctagagagagtgcacaaaagagagtattgcta 16178590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 2187893 - 2187811
Alignment:
Q  10 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 92  Q
    |||||||| |||| |||||| |||||| |||||||| | ||||||  ||||| |||||||||||| ||||||||||| |||||    
T  2187893 aaagtgtaggtcccacattgttttcacacaataaaaaaatgagtgttagagagagtgctcaaaagcgagtgttgctagcattc 2187811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 39016755 - 39016845
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    |||||||| ||||||||    |||||||||||| ||  ||||||||||| ||||| ||||| |||| ||||||||||||||||||| ||||    
T  39016755 tccatttccaaagtgtagtatctacattgattttacctaataaaagagtaagtgctagagagagtgttcaaaagagagtgttgctaacatt 39016845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 43771195 - 43771126
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 92  Q
    |||||||||||||  ||||||||||||||||   ||||| |||| ||||||| |||||||||||||||||    
T  43771195 tacattgatttcatccaataaaagagtgagtcatagagagagtgttcaaaagtgagtgttgctaccattc 43771126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 47237855 - 47237923
Alignment:
Q  26 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcct 94  Q
    ||||||||||  |||||||||||||| ||| ||||| |||| |||||||||||||||| || |||||||    
T  47237855 attgatttcatccaataaaagagtgaatgctagagagagtgttcaaaagagagtgttgatagcattcct 47237923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 2187926 - 2187992
Alignment:
Q  25 cattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    |||||||||||| ||||||||||| ||  || ||||| |||||||||||||||||||| ||| ||||    
T  2187926 cattgatttcacccaataaaagagcgaaagctagagagagtgctcaaaagagagtgttcctaacatt 2187992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 37315629 - 37315564
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    |||||||||||||| |||   |||||||||||  ||||| |||||||||||||||||||||||| ||||    
T  37315629 tacattgatttcacccaa---aagagtgagtgttagagagagtgctcaaaagagagtgttgctagcatt 37315564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 20225467 - 20225525
Alignment:
Q  38 caataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctcctt 98  Q
    |||||||||||||||||| |||||  ||| ||||||| ||||||||||| |||||||||||    
T  20225467 caataaaagagtgagtgctagaga--gtgttcaaaagtgagtgttgctagcattcctcctt 20225525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 16178675 - 16178726
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgag 52  Q
    |||||||| |||||||| || ||||||||||||||  |||||||||||||||    
T  16178675 tccatttccaaagtgtaggttctacattgatttcatccaataaaagagtgag 16178726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 40991703 - 40991772
Alignment:
Q  26 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||||||||  |||| ||||||||||||  ||||| |||| | ||||| ||||||||||| ||||||||    
T  40991703 attgatttcatccaatgaaagagtgagtgatagagagagtgttgaaaagtgagtgttgctagcattcctc 40991772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 34129511 - 34129583
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    ||||||||| |||  ||||| |||||||||||| ||||| |||  | ||||| || |||||||||||||||||    
T  34129511 tacattgatctcatccaatagaagagtgagtgctagagagagttttgaaaagtgaatgttgctaccattcctc 34129583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 44832532 - 44832460
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||| ||||||| |||||||| ||||||||  ||| | | ||||||||||||| ||||| || ||||||||    
T  44832532 tacattaatttcacccaataaaaaagtgagtgatagaaagaatgctcaaaagagaatgttgttagcattcctc 44832460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 50571933 - 50571861
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||   ||||||||||| ||||| ||||| |||| | ||||| || |||||||| ||||||||    
T  50571933 tacattgatttcatctaataaaagagtaagtgctagagagagtgttgaaaagtgactgttgctaacattcctc 50571861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 1205922 - 1206002
Alignment:
Q  4 atttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgc 84  Q
    ||||| |||||||| ||| ||||||||||||||||||||||||||||||||| | ||| |||| |||||| ||||||||||    
T  1205922 atttccaaagtgtaggtcttacattgatttcactcaataaaagagtgagtgctaaagagagtgttcaaaatagagtgttgc 1206002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 33417776 - 33417839
Alignment:
Q  3 catttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtg 66  Q
    |||||| |||||||| |||||||||| |||||||||||||||||||||||||| ||||| ||||    
T  33417776 catttccaaagtgtaggtcctacattaatttcactcaataaaagagtgagtgctagagagagtg 33417839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 35689572 - 35689651
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtg 80  Q
    |||||||  |||||||| |||| |||||| |||||| |||||||| ||||||||| ||||| ||||||||||||||||||    
T  35689572 tccattttcaaagtgtaagtcccacattgttttcacccaataaaaaagtgagtgctagagagagtgctcaaaagagagtg 35689651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 7599506 - 7599425
Alignment:
Q  5 tttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 86  Q
    |||| |||||||| ||||||||||||||| ||||||||||| ||||||||  ||| | | ||||||||| ||||||||||||    
T  7599506 tttccaaagtgtaggtcctacattgattttactcaataaaaaagtgagtgttagaaagaatgctcaaaaaagagtgttgcta 7599425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 35689549 - 35689481
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    |||||||||||||  |||||||| ||||||||| ||||| ||||||||||||||||||||  |||||||    
T  35689549 tacattgatttcatccaataaaaaagtgagtgctagagagagtgctcaaaagagagtgttcttaccatt 35689481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 13407403 - 13407318
Alignment:
Q  10 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||| || |||||||||| || |||| | ||| ||||||  ||||| |||| ||||||||||||||||||| ||||||||    
T  13407403 aaagtgtatgacccacattgatttaacccaatgagagaatgagtgttagagagagtgttcaaaagagagtgttgctagcattcctc 13407318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 7599533 - 7599605
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||  ||||||||||||  |||| ||||| |||| |||||| |||||||||||| ||||||||    
T  7599533 tacattgatttcatccaataaaagagtaggtgctagagagagtgttcaaaaaagagtgttgctaacattcctc 7599605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 1205880 - 1205833
Alignment:
Q  39 aataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 86  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  1205880 aataaaagagtgagtgctaaagagagtgctcaaaagagagtgttgcta 1205833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 28211974 - 28211885
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    ||||||| |||||| || |||||||||||||||||| ||||||||  |||| ||  ||| | | |||||||||||||||||||||| ||||    
T  28211974 tccatttttaaagtataggtcctacattgatttcacccaataaaa-tgtgaatgttagaaataatgctcaaaagagagtgttgctaacatt 28211885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 34303517 - 34303432
Alignment:
Q  10 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||| ||| |||||||||||||| |||||||||||| ||||| |||||   |||| |||||||  |||||||| | ||||||    
T  34303517 aaagtgtaggtcttacattgatttcacccaataaaagagttagtgctagagaggatgcttaaaagaggatgttgctagctttcctc 34303432  T

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Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 12212212 - 12212128
Alignment:
Q  2 ccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 86  Q
    ||||||| |||||||| | || ||||||||||||| ||| |||||||||| ||  ||||| | || | |||||||||||||||||    
T  12212212 ccatttccaaagtgtaggacccacattgatttcacccaagaaaagagtgaatgttagagagaatgttgaaaagagagtgttgcta 12212128  T

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Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 12456640 - 12456556
Alignment:
Q  2 ccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 86  Q
    ||||||| |||||||| | || ||||||||||||| ||| |||||||||| ||  ||||| | || | |||||||||||||||||    
T  12456640 ccatttccaaagtgtaggacccacattgatttcacccaagaaaagagtgaatgttagagagaatgttgaaaagagagtgttgcta 12456556  T

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Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 23142903 - 23142812
Alignment:
Q  1 tccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||| ||||| || || | |||||| |||||| |||||||| | ||| ||| |||||  ||||||||||||||||||||||| ||||||||    
T  23142903 tccatttccaaagtctaggttccacattgttttcacccaataaaaaa-tgaatgctagaga--gtgctcaaaagagagtgttgctagcattcctc 23142812  T

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Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 8914825 - 8914768
Alignment:
Q  38 caataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||| ||||||||||||  ||||| || ||||||||| ||||||||||| ||||||||    
T  8914825 caatgaaagagtgagtgttagagagagcgctcaaaagtgagtgttgctagcattcctc 8914768  T

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Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 16441875 - 16441842
Alignment:
Q  21 cctacattgatttcactcaataaaagagtgagtg 54  Q
    ||||||| ||||||||||||||||||||||||||    
T  16441875 cctacatagatttcactcaataaaagagtgagtg 16441842  T

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Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 23142937 - 23143002
Alignment:
Q  26 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    ||||||||||| |||||||| ||| |||||  |||| ||||||||||| |||||||| ||| ||||    
T  23142937 attgatttcacccaataaaaaagtaagtgcttgagagagtgctcaaaaaagagtgttcctaacatt 23143002  T

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Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 24055977 - 24055932
Alignment:
Q  38 caataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttg 83  Q
    |||||| ||||||||||  |||||||||| ||||||||||||||||    
T  24055977 caataagagagtgagtgttagagaaagtgttcaaaagagagtgttg 24055932  T

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Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 44709342 - 44709309
Alignment:
Q  21 cctacattgatttcactcaataaaagagtgagtg 54  Q
    |||||||||||||||| |||||||||||||||||    
T  44709342 cctacattgatttcacacaataaaagagtgagtg 44709309  T

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Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 1977284 - 1977356
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||  ||| | |||||||||||| ||||| |||| | ||||| |||| |||||| ||||||||    
T  1977284 tacattgatttcatccaacagaagagtgagtgctagagagagtgttaaaaagtgagtattgctagcattcctc 1977356  T

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Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 11310477 - 11310537
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttg 83  Q
    ||||||||||||||||||||| ||||||| |   ||||||| ||  |||||||||||||||    
T  11310477 tacattgatttcactcaataagagagtgaatcttagagaaattgtacaaaagagagtgttg 11310537  T

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Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 31301184 - 31301112
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||||||||  ||||||||||||||||||  || | |||| ||||||| |||||||  || ||||||||    
T  31301184 tacattgatttcatccaataaaagagtgagtgccggaaatagtgttcaaaagtgagtgttattagcattcctc 31301112  T

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Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 32072166 - 32072098
Alignment:
Q  23 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 91  Q
    |||||| ||||||  |||||||||||||||||| ||||| |||| | ||||| || |||||||| ||||    
T  32072166 tacattcatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgaatgttgctagcatt 32072098  T

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Target: scaffold0054 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 30992 - 30907
Alignment:
Q  10 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 95  Q
    |||||||| || |||||||||| |||| |||||||| ||||| ||| ||| | ||| |||||||||||||||||||| | ||||||    
T  30992 aaagtgtaggttctacattgatgtcacccaataaaaaagtgaatgctagaaagagtactcaaaagagagtgttgctagccttcctc 30907  T

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Target: scaffold0099 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 27421 - 27467
Alignment:
Q  16 tatgtcctacattgatttcactcaa-taaaagagtgagtgcaagaga 61  Q
    ||||||||||||||||||||| ||| ||||||||||||||| |||||    
T  27421 tatgtcctacattgatttcacccaattaaaagagtgagtgctagaga 27467  T

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