View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21563_high_11 (Length: 246)
Name: NF21563_high_11
Description: NF21563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21563_high_11 |
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Alignment Details
Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 46628869 - 46629112
Alignment:
| Q |
1 |
ttttacagaattaagggtatacatcatagagaaggcaatgaggaaaattccaaaggtggtgtttcctccaacagaacaccttgtaaaatgggggagc--a |
98 |
Q |
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| T |
46628869 |
ttttacagaattaagggtatacatcatagagaaggcaatgaggaaaattccaaaggtggtgtttcctccaacagaacaccttgtaaaatgggggagcata |
46628968 |
T |
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| Q |
99 |
tatgtaatcatgccatgtgattgccaactagtggtttgtatatgaaaatatatccttcagatcaaaacaaatatgcaaattaattacttactctat--ta |
196 |
Q |
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| T |
46628969 |
tatgtaaacatgccatgtgattgccaactagtggtttgtatatgaaaatatatccttcagatcaaaacaaatatgcaaattaattacttactctattata |
46629068 |
T |
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| Q |
197 |
tgaataagatgggcctatagctattaatttgatgtatacctatg |
240 |
Q |
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| T |
46629069 |
tgaataagatgggcctatagctattaatttgatgtatacctatg |
46629112 |
T |
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