View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21563_high_9 (Length: 260)
Name: NF21563_high_9
Description: NF21563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21563_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 38579792 - 38580049
Alignment:
| Q |
1 |
gataaggcgctgggagcagttttatgaactaaaatttttaaatataaaaatccttg-aagtaaaatagcaatacttggcgtaagccagtaacaaagaagt |
99 |
Q |
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| T |
38579792 |
gataaggcgctgagagcagttttatgaactaaaatttttaaatataaaaatccttggaagtaaaatagcaatacttggcgtaagccagtaacaaagaagt |
38579891 |
T |
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| Q |
100 |
cggacaagaaagcaactaaagatttttcttacaaagcattgtctctatgactgtatgcattactaaatgcttaattgtatggtatataagtttgagatgc |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38579892 |
cggacaagaaagcaactaaagatttttcttacaaagcattgtctctatgactgtatgcattactaaatgcttaattgtatggtatataagtttgagatgc |
38579991 |
T |
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| Q |
200 |
gtatcagtttttgtttgtgtcatccacaaatactgagcaatccataaatcaggttcat |
257 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38579992 |
gtatcagtttttgtttgtgtcatccacaaatactgagcaatccataaatcaggttcat |
38580049 |
T |
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