View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21563_low_10 (Length: 269)
Name: NF21563_low_10
Description: NF21563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21563_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 12 - 251
Target Start/End: Complemental strand, 47455878 - 47455639
Alignment:
| Q |
12 |
attgagttaatatcgtatgatataaatatagacaaattaagcttacatctttcgaagcacggtgtttcttagttggattcccacatgagtttgtcttatc |
111 |
Q |
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| T |
47455878 |
attgagttaatatcatatgatataaatatagacaaattaagcttacatctttcgaagcacggtgtttcttagttggattcccacatgagtttgtcttatc |
47455779 |
T |
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| Q |
112 |
ttctacttgcacatcaaattctggcacaccaagcatccttttgagcttcaactgtttggtggaagaaacaataggttgaacttgactgtgatcaaaattc |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47455778 |
ttctacttgcacatcaaattctggcacaccaagcatccttttgagcttcaactgtttggtggaagaaacaataggttgaacttgactgtgatcaaaattc |
47455679 |
T |
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| Q |
212 |
tctgttttgtcactattgttagctgccacatgatcagaac |
251 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
47455678 |
tctgttttgtcactattgttagctgccacatgatcagaac |
47455639 |
T |
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