View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21565_low_2 (Length: 582)
Name: NF21565_low_2
Description: NF21565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21565_low_2 |
 | |
|
| [»] chr7 (6 HSPs) |
| |
|
| [»] chr4 (1 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 493; Significance: 0; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 493; E-Value: 0
Query Start/End: Original strand, 42 - 582
Target Start/End: Original strand, 21110953 - 21111493
Alignment:
| Q |
42 |
attatttgcaaacgaaggaatctaatttaacatcatgcatcactcattaagagacctaggaatctatttcatttctttgaagcttctcaaccacttgact |
141 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
21110953 |
attatttgcacacgaaggaatctaattcaacatcatgcatcactcattaagagacctaggaatctatttcatttctttgaagcttctcaaccacctgact |
21111052 |
T |
|
| Q |
142 |
catagtaggcctaatatttttatctacctcttcacactccaaagcaactttcgccaaaatttccatcttacttgaatcacaattagttccaatattagga |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
21111053 |
catagtaggcctaatatttttatctacctctacacactccaaagcaactttcgccaaaatttccatcttacttgaatcacaattagttccaattttagga |
21111152 |
T |
|
| Q |
242 |
tccaaaatttcttccacccaacatctactcctctttttctctcttacccaagttatcaaccttccattgtatgcaacttctccatcaactccttctatat |
341 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
21111153 |
tccataatttcttccacccaacatctactcctctttttctctcttacccaatttatcaaccttccattgtatgccacttctccatcaactccttccatat |
21111252 |
T |
|
| Q |
342 |
tcatcattgttggactctttccggttatcatctccaacaatacaaccccataactataaacatccactttagatgttattggtaaattggaaatccattc |
441 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
21111253 |
tcatcattgttggactctttccggttatcatatccaacaaaacaaccccataactataaacatccactttagatgttattggtgaattggaaatccattc |
21111352 |
T |
|
| Q |
442 |
aggggccatatatcctcttgttcctctaatcattgagaattctgaattattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaac |
541 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21111353 |
aggggccatatatcctcttgttcctctaatcattgagaattctgaattattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaac |
21111452 |
T |
|
| Q |
542 |
ttgggctgaaagttagaatcaagaagtatattttgaggctt |
582 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21111453 |
ttgggctgaaagttagaatcaagaagtatattttgaggctt |
21111493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 108 - 582
Target Start/End: Original strand, 18658141 - 18658615
Alignment:
| Q |
108 |
tttcatttctttgaagcttctcaaccacttgactcatagtaggcctaatatttttatctacctcttcacactccaaagcaactttcgccaaaatttccat |
207 |
Q |
| |
|
||||||| |||||||||||||||||||| || |||||| |||||||||||| | ||||| ||||| |||| |||||||||||||| ||||||| |||||| |
|
|
| T |
18658141 |
tttcattgctttgaagcttctcaaccacctggctcatattaggcctaatatctctatcttcctctacacaatccaaagcaactttagccaaaacttccat |
18658240 |
T |
|
| Q |
208 |
cttacttgaatcacaattagttccaatattaggatccaaaatttcttccacccaacatctactcctctttttctctcttacccaagttatcaaccttcca |
307 |
Q |
| |
|
|||| || |||||||||| || || || |||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18658241 |
cttatttaaatcacaattggtccccattgcaggatccataatttcttcaacccaacatgtactcctctttttctctcttacccaagttatcaaccttcca |
18658340 |
T |
|
| Q |
308 |
ttgtatgcaacttctccatcaactccttctatattcatcattgttggactctttccggttatcatctccaacaatacaaccccataactataaacatcca |
407 |
Q |
| |
|
|||||||| | |||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
18658341 |
ttgtatgccatttctccatcaacgtcttctatattcatcatcgttggactctttccagttatcatctccaacaatacaaccccataaccataaacatcca |
18658440 |
T |
|
| Q |
408 |
ctttagatgttattggtaaattggaaatccattcaggggccatatatcctcttgttcctctaatcattgagaattctgaattattattaagattgtttct |
507 |
Q |
| |
|
|||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
18658441 |
ctttagatgttattggcaaattgaaaatccactcaggggccatatatcctcttgttcctctaatcattgagaattctgaattattattaagactgtttcg |
18658540 |
T |
|
| Q |
508 |
gcttttcagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctt |
582 |
Q |
| |
|
| ||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
18658541 |
ggttttcagcttagataatccaaaatctgctaacttagggtgaaagttagaatcaagaagtatgttttgaggctt |
18658615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 116 - 582
Target Start/End: Original strand, 21129987 - 21130453
Alignment:
| Q |
116 |
ctttgaagcttctcaaccacttgactcatagtaggcctaatatttttatctacctcttcacactccaaagcaactttcgccaaaatttccatcttacttg |
215 |
Q |
| |
|
||||||||| ||||||| || |||||||||||||||||||||| ||||| | || |||| |||||||||||| | |||||||||||||||||||| |
|
|
| T |
21129987 |
ctttgaagcatctcaacaacctgactcatagtaggcctaatatccctatcttcttcaacacaatccaaagcaactctaaccaaaatttccatcttactta |
21130086 |
T |
|
| Q |
216 |
aatcacaattagttccaatattaggatccaaaatttcttccacccaacatctactcctctttttctctcttacccaagttatcaaccttccattgtatgc |
315 |
Q |
| |
|
||||| ||||| | || || ||||||||| |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
21130087 |
aatcataattattccctattgcaggatccaagatttgttcaacccaacatgtactcctctttttctctcttacccaagttatcaaccttccattatatgt |
21130186 |
T |
|
| Q |
316 |
aacttctccatcaactccttctatattcatcattgttggactctttccggttatcatctccaacaatacaaccccataactataaacatccactttagat |
415 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
21130187 |
cccttctccatcaactccttctatattcatcattgttggactctttccggttatcatctctaacacgacaaccccgtaactataaacatccactttagat |
21130286 |
T |
|
| Q |
416 |
gttattggtaaattggaaatccattcaggggccatatatcctcttgttcctctaatcattgagaattctgaattattattaagattgtttctgcttttca |
515 |
Q |
| |
|
||||||||||||||| ||||||| ||||| ||||||||||||| |||||||||||||||||||||| ||||| |||||| |||||||||| ||| | |
|
|
| T |
21130287 |
gttattggtaaattgaaaatccactcaggtgccatatatcctcgtgttcctctaatcattgagaatcctgaactattatcgagattgtttcgattttgta |
21130386 |
T |
|
| Q |
516 |
gcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctt |
582 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21130387 |
gcttagacaatccaaaatcggctaacttgggctgaaagttagaatcaagaagtatattttgaggctt |
21130453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 381 - 582
Target Start/End: Original strand, 21123124 - 21123325
Alignment:
| Q |
381 |
atacaaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatatcctcttgttcctctaatcattgagaa |
480 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21123124 |
atacaaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatatcctcttgttcctctaatcattgagaa |
21123223 |
T |
|
| Q |
481 |
ttctgaattattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggc |
580 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
21123224 |
ttctgaattattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggttgaaagttagaatcaagaagtatattttgaggc |
21123323 |
T |
|
| Q |
581 |
tt |
582 |
Q |
| |
|
|| |
|
|
| T |
21123324 |
tt |
21123325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 350 - 582
Target Start/End: Complemental strand, 21108601 - 21108372
Alignment:
| Q |
350 |
gttggactctttccggttatcatctccaacaatacaaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggcca |
449 |
Q |
| |
|
|||||||| ||||| |||||||| ||||| | || | |||||||||||||||||||| |||||||||||||| |||||| ||||||||||||| |||| |
|
|
| T |
21108601 |
gttggactttttcctgttatcatttccaaaacaactattccataactataaacatccaccttagatgttattggcaaattgaaaatccattcaggtgcca |
21108502 |
T |
|
| Q |
450 |
tatatcctcttgttcctctaatcattgagaattctgaattattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggctg |
549 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||| ||||||||| ||||| ||| ||| |||||| |||||||||||||| |||||||||||||| |
|
|
| T |
21108501 |
tataccctcttgttcctctaatcattgagatgcatga---attattaaggttgttcctgttttgcagctttgacaatccaaaatcggctaacttgggctg |
21108405 |
T |
|
| Q |
550 |
aaagttagaatcaagaagtatattttgaggctt |
582 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||| |
|
|
| T |
21108404 |
gaagttagaatcaagaagtatgttttgtggctt |
21108372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 350 - 582
Target Start/End: Complemental strand, 21098982 - 21098753
Alignment:
| Q |
350 |
gttggactctttccggttatcatctccaacaatacaaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggcca |
449 |
Q |
| |
|
|||||||| ||||| |||||||| ||||| | || | ||||| ||||||||||| ||||||||||||||||| |||||| |||||||||| ||||||| |
|
|
| T |
21098982 |
gttggactttttcctgttatcatttccaatacaactattccatagctataaacatctactttagatgttattggcaaattgaaaatccattctggggcca |
21098883 |
T |
|
| Q |
450 |
tatatcctcttgttcctctaatcattgagaattctgaattattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggctg |
549 |
Q |
| |
|
|||| |||||||||||||||||||| || | ||| ||| || |||||||||||| ||| ||||||||||||||||||||| ||||||||||| | |
|
|
| T |
21098882 |
tataccctcttgttcctctaatcatagatacacttga---attgttgagattgtttctgttttgcagcttagacaatccaaaatccgctaacttgggttc |
21098786 |
T |
|
| Q |
550 |
aaagttagaatcaagaagtatattttgaggctt |
582 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| |
|
|
| T |
21098785 |
gaagttagaatcaagaagtatattttgcggctt |
21098753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 116 - 582
Target Start/End: Complemental strand, 39132749 - 39132283
Alignment:
| Q |
116 |
ctttgaagcttctcaaccacttgactcatagtaggcctaatatttttatctacctcttcacactccaaagcaactttcgccaaaatttccatcttacttg |
215 |
Q |
| |
|
|||| |||| |||||||||| || |||||| |||||||||||| | ||||| ||||| ||||||||||||||||||| |||||||||||||||||| || |
|
|
| T |
39132749 |
ctttcaagcatctcaaccacctggctcatattaggcctaatatctctatcttcctctacacactccaaagcaactttagccaaaatttccatcttaatta |
39132650 |
T |
|
| Q |
216 |
aatcacaattagttccaatattaggatccaaaatttcttccacccaacatctactcctctttttctctcttacccaagttatcaaccttccattgtatgc |
315 |
Q |
| |
|
||||||||||| | | || |||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
39132649 |
aatcacaattaatcactattgaaggatccataatttcttccacccaacatgcactcctttttttctctcttacccaagttaccaaccttccattatatgc |
39132550 |
T |
|
| Q |
316 |
aacttctccatcaactccttctatattcatcattgttggactctttccggttatcatctccaacaatacaaccccataactataaacatccactttagat |
415 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| || ||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
39132549 |
cacttctccatcaactccttcaatattcatcattgttgatctttttccagttatcatctccaacaaaacaatcccataactataaacatccactttagat |
39132450 |
T |
|
| Q |
416 |
gttattggtaaattggaaatccattcaggggccatatatcctcttgttcctctaatcattgagaattctgaattattattaagattgtttctgcttttca |
515 |
Q |
| |
|
||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||| || ||| |
|
|
| T |
39132449 |
gttattggtaaattgaaaacccattcaggagccatatatcctcttgttcctctaatcattgagaattctgaattactattgacattgtttctatttctca |
39132350 |
T |
|
| Q |
516 |
gcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctt |
582 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
39132349 |
gcttagacaatccaaagtctgctaacttgggttgatagttagaatcaagaagtatattttgaggctt |
39132283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 44 - 292
Target Start/End: Original strand, 4329251 - 4329499
Alignment:
| Q |
44 |
tatttgcaaacgaaggaatctaatttaacatcatgcatcactcattaagagacctaggaatctatttcatttctttgaagcttctcaaccacttgactca |
143 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4329251 |
tatttgcaaacgaaggaatctaatttaacatcatgtatcactcattaagagacctaggaatctatttcatttctttgaagcttctcaaccacctgactca |
4329350 |
T |
|
| Q |
144 |
tagtaggcctaatatttttatctacctcttcacactccaaagcaactttcgccaaaatttccatcttacttgaatcacaattagttccaatattaggatc |
243 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4329351 |
tagtaggcctaatatttttatctacctctacacacttcaaagcaactttggccaaaatttccatcttacttgaatcacaattagttccaatattaggatc |
4329450 |
T |
|
| Q |
244 |
caaaatttcttccacccaacatctactcctctttttctctcttacccaa |
292 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4329451 |
cataatttcttccacccaacatctactcctctttttctctcttacccaa |
4329499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 60; Significance: 3e-25; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 350 - 493
Target Start/End: Original strand, 26675261 - 26675404
Alignment:
| Q |
350 |
gttggactctttccggttatcatctccaacaatacaaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggcca |
449 |
Q |
| |
|
||||||||||||||||| ||||||||||||| |||| ||||||||||||||||| || || || || ||||| || ||| ||||||||||||| |||| |
|
|
| T |
26675261 |
gttggactctttccggtaatcatctccaacaccacaattccataactataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgcca |
26675360 |
T |
|
| Q |
450 |
tatatcctcttgttcctctaatcattgagaattctgaattatta |
493 |
Q |
| |
|
| || |||||||||||||| ||| ||||||| |||||||||| |
|
|
| T |
26675361 |
tgtaacctcttgttcctctcatccttgagaaacttgaattatta |
26675404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 348 - 491
Target Start/End: Original strand, 26713623 - 26713766
Alignment:
| Q |
348 |
ttgttggactctttccggttatcatctccaacaatacaaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggc |
447 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||||||||| || || ||| | | ||| ||| ||||||||| || |
|
|
| T |
26713623 |
ttgttggactctttccggtaatcatctccaacaccacaactccatagctataaacatccacttttgaagtgatttgcatgttgaaaacccattcaggtgc |
26713722 |
T |
|
| Q |
448 |
catatatcctcttgttcctctaatcattgagaattctgaattat |
491 |
Q |
| |
|
||| || |||| ||| |||| |||| ||||||| | |||||||| |
|
|
| T |
26713723 |
catgtaacctcgtgtccctcgaatccttgagaagtttgaattat |
26713766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 348 - 491
Target Start/End: Original strand, 26736859 - 26737002
Alignment:
| Q |
348 |
ttgttggactctttccggttatcatctccaacaatacaaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggc |
447 |
Q |
| |
|
|||||||||||||||| || ||||||||||||| ||||| ||||| ||||||||||||||||| || || ||| | | ||| ||| ||||||||| || |
|
|
| T |
26736859 |
ttgttggactctttcctgtaatcatctccaacaccacaactccatagctataaacatccacttttgaagtgatttgcatgttgaaaacccattcaggtgc |
26736958 |
T |
|
| Q |
448 |
catatatcctcttgttcctctaatcattgagaattctgaattat |
491 |
Q |
| |
|
||| || |||| ||| |||| |||| ||||||| | |||||||| |
|
|
| T |
26736959 |
catgtaacctcgtgtccctcgaatccttgagaagtttgaattat |
26737002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 348 - 491
Target Start/End: Original strand, 26750795 - 26750938
Alignment:
| Q |
348 |
ttgttggactctttccggttatcatctccaacaatacaaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggc |
447 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| || || ||||| |||||||| ||||||||||| || ||| | | ||| ||| ||||||||| || |
|
|
| T |
26750795 |
ttgttggactctttccggtaatcatctccaacacaacgactccatagctataaacgtccactttagaagtgatttgcatgttgaaaacccattcaggtgc |
26750894 |
T |
|
| Q |
448 |
catatatcctcttgttcctctaatcattgagaattctgaattat |
491 |
Q |
| |
|
||| || |||||||| |||| |||| | ||||| | |||||||| |
|
|
| T |
26750895 |
catgtaacctcttgtccctcgaatcctcgagaaatttgaattat |
26750938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 480
Target Start/End: Complemental strand, 26732126 - 26732001
Alignment:
| Q |
355 |
actctttccggttatcatctccaacaatacaaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatat |
454 |
Q |
| |
|
|||||| ||||| |||||||| | || ||||| ||||| ||||||||||| || || || || ||||| || ||| ||||||||||||| ||||| || |
|
|
| T |
26732126 |
actcttcccggtaatcatctctagcagcacaactccatagctataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaa |
26732027 |
T |
|
| Q |
455 |
cctcttgttcctctaatcattgagaa |
480 |
Q |
| |
|
|||||||||||||| ||| ||||||| |
|
|
| T |
26732026 |
cctcttgttcctctcatccttgagaa |
26732001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 348 - 488
Target Start/End: Original strand, 26743870 - 26744010
Alignment:
| Q |
348 |
ttgttggactctttccggttatcatctccaacaatacaaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggc |
447 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| || || ||||| ||||||||||||||||| || || ||| | ||| ||| ||| ||||| || |
|
|
| T |
26743870 |
ttgttggactctttccggtaatcatctccaacacaacgactccatagctataaacatccacttttgaagtgatttccatgttgaaaacccactcaggtgc |
26743969 |
T |
|
| Q |
448 |
catatatcctcttgttcctctaatcattgagaattctgaat |
488 |
Q |
| |
|
||| || |||||||| |||| |||| | ||||||| ||||| |
|
|
| T |
26743970 |
catgtaacctcttgtccctcgaatcctcgagaattttgaat |
26744010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 480
Target Start/End: Complemental strand, 26690787 - 26690690
Alignment:
| Q |
383 |
acaaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatatcctcttgttcctctaatcattgagaa |
480 |
Q |
| |
|
||||| ||||| ||||||||||| || || || || ||||| || ||| ||||||||||||| ||||| || |||||||||||||| ||| ||||||| |
|
|
| T |
26690787 |
acaactccatagctataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaa |
26690690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 480
Target Start/End: Complemental strand, 26694976 - 26694851
Alignment:
| Q |
355 |
actctttccggttatcatctccaacaatacaaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatat |
454 |
Q |
| |
|
|||||| ||||| |||||||| | || ||||| ||||| ||||||||||| || || || || ||||| || ||| ||||||||||||| |||| || |
|
|
| T |
26694976 |
actcttcccggtaatcatctctagcagcacaactccatagctataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtcccatgtaa |
26694877 |
T |
|
| Q |
455 |
cctcttgttcctctaatcattgagaa |
480 |
Q |
| |
|
|||||||||||||| ||| ||||||| |
|
|
| T |
26694876 |
cctcttgttcctctcatccttgagaa |
26694851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 348 - 491
Target Start/End: Original strand, 26698471 - 26698614
Alignment:
| Q |
348 |
ttgttggactctttccggttatcatctccaacaatacaaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggc |
447 |
Q |
| |
|
||||||||| ||| || || || |||||||||| ||||| ||||| ||||||||||||||||| || || ||| | | ||| ||| ||||||||| || |
|
|
| T |
26698471 |
ttgttggacccttaccagtaattatctccaacaccacaactccatagctataaacatccacttttgaagtaatttgcatgttgaaaacccattcaggtgc |
26698570 |
T |
|
| Q |
448 |
catatatcctcttgttcctctaatcattgagaattctgaattat |
491 |
Q |
| |
|
||| || |||||||| |||| |||| | ||||| | |||||||| |
|
|
| T |
26698571 |
catgtaacctcttgtccctcgaatcctcgagaaatttgaattat |
26698614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 348 - 491
Target Start/End: Original strand, 26733634 - 26733777
Alignment:
| Q |
348 |
ttgttggactctttccggttatcatctccaacaatacaaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggc |
447 |
Q |
| |
|
||||||||| ||| || || || |||||||||| ||||| ||||| ||||||||||||||||| || || ||| | | ||| ||| ||||||||| || |
|
|
| T |
26733634 |
ttgttggacccttaccagtaattatctccaacaccacaactccatagctataaacatccacttttgaagtaatttgcatgttgaaaacccattcaggtgc |
26733733 |
T |
|
| Q |
448 |
catatatcctcttgttcctctaatcattgagaattctgaattat |
491 |
Q |
| |
|
||| || |||||||| |||| |||| | ||||| | |||||||| |
|
|
| T |
26733734 |
catgtaacctcttgtccctcgaatcctcgagaaatttgaattat |
26733777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 467
Target Start/End: Original strand, 47212046 - 47212153
Alignment:
| Q |
360 |
ttccggttatcatctccaacaatacaaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatatcctct |
459 |
Q |
| |
|
|||| |||||||| ||||||| || | ||||| ||||||||||| |||||||||||||||| ||| ||||||| ||||| ||||| || ||||| |
|
|
| T |
47212046 |
ttccagttatcatttccaacacaaccattccatagctataaacatcaactttagatgttattgaatgattcaaaatccactcaggtgccatgtaacctct |
47212145 |
T |
|
| Q |
460 |
tgttcctc |
467 |
Q |
| |
|
|||||||| |
|
|
| T |
47212146 |
tgttcctc |
47212153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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