View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21565_low_7 (Length: 291)

Name: NF21565_low_7
Description: NF21565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21565_low_7
NF21565_low_7
[»] chr2 (40 HSPs)
chr2 (1-265)||(16717456-16717722)
chr2 (123-265)||(3882584-3882729)
chr2 (148-269)||(2825945-2826066)
chr2 (144-264)||(27948004-27948127)
chr2 (147-269)||(8964387-8964509)
chr2 (145-265)||(2888901-2889021)
chr2 (123-261)||(42924414-42924554)
chr2 (125-248)||(18227092-18227218)
chr2 (148-265)||(27133072-27133189)
chr2 (165-269)||(35477677-35477782)
chr2 (148-251)||(37617396-37617499)
chr2 (164-265)||(10824649-10824751)
chr2 (124-261)||(11001441-11001580)
chr2 (184-265)||(14102292-14102373)
chr2 (124-265)||(13811010-13811152)
chr2 (146-265)||(6581543-6581661)
chr2 (145-268)||(39640134-39640256)
chr2 (147-261)||(10204152-10204269)
chr2 (148-263)||(45303518-45303629)
chr2 (144-249)||(18223106-18223211)
chr2 (148-265)||(19495200-19495316)
chr2 (152-260)||(35312103-35312211)
chr2 (123-221)||(18053054-18053155)
chr2 (123-265)||(25622502-25622646)
chr2 (145-265)||(2517237-2517358)
chr2 (144-265)||(6797189-6797310)
chr2 (147-233)||(6761751-6761837)
chr2 (145-210)||(14663228-14663293)
chr2 (147-200)||(45076186-45076239)
chr2 (123-234)||(8773697-8773811)
chr2 (146-206)||(33275945-33276005)
chr2 (214-265)||(38786269-38786321)
chr2 (123-198)||(11742165-11742242)
chr2 (146-201)||(41079456-41079511)
chr2 (147-206)||(44195502-44195561)
chr2 (126-205)||(2393093-2393174)
chr2 (184-237)||(7271812-7271865)
chr2 (123-195)||(37313732-37313805)
chr2 (124-223)||(20683032-20683134)
chr2 (183-243)||(29866444-29866504)
[»] chr1 (36 HSPs)
chr1 (123-269)||(4520997-4521144)
chr1 (147-266)||(33744127-33744246)
chr1 (128-265)||(36621908-36622046)
chr1 (147-264)||(26322609-26322727)
chr1 (147-265)||(36321618-36321736)
chr1 (146-265)||(8836486-8836603)
chr1 (147-250)||(48811928-48812031)
chr1 (152-253)||(7481379-7481481)
chr1 (125-260)||(17112673-17112814)
chr1 (123-236)||(40570657-40570774)
chr1 (146-251)||(26687532-26687638)
chr1 (128-265)||(46830125-46830265)
chr1 (148-265)||(50670388-50670506)
chr1 (125-263)||(17554829-17554969)
chr1 (148-251)||(2633027-2633130)
chr1 (150-265)||(14774100-14774215)
chr1 (147-265)||(4772017-4772135)
chr1 (146-244)||(9221237-9221335)
chr1 (185-265)||(15549640-15549720)
chr1 (122-221)||(34445636-34445738)
chr1 (122-261)||(37976796-37976936)
chr1 (144-250)||(47031476-47031582)
chr1 (123-207)||(7549811-7549898)
chr1 (123-210)||(34861260-34861350)
chr1 (125-265)||(37705847-37705990)
chr1 (123-221)||(3047835-3047936)
chr1 (153-251)||(28672294-28672393)
chr1 (121-199)||(34232766-34232847)
chr1 (143-206)||(44442241-44442304)
chr1 (150-239)||(12590648-12590738)
chr1 (147-224)||(4039636-4039713)
chr1 (153-197)||(6285847-6285891)
chr1 (148-203)||(64881-64936)
chr1 (123-188)||(31807850-31807918)
chr1 (147-223)||(40203113-40203189)
chr1 (185-245)||(40619719-40619779)
[»] chr4 (34 HSPs)
chr4 (148-261)||(50343833-50343946)
chr4 (144-265)||(54700837-54700956)
chr4 (151-245)||(16822277-16822371)
chr4 (123-265)||(32055333-32055478)
chr4 (143-261)||(37179682-37179800)
chr4 (144-271)||(42956958-42957086)
chr4 (124-265)||(50086401-50086544)
chr4 (123-265)||(47560594-47560738)
chr4 (147-269)||(2137181-2137303)
chr4 (144-226)||(10575981-10576062)
chr4 (145-251)||(50774954-50775060)
chr4 (163-264)||(10095634-10095735)
chr4 (121-246)||(2063442-2063569)
chr4 (147-242)||(53737810-53737905)
chr4 (147-262)||(39827144-39827260)
chr4 (148-251)||(28005250-28005353)
chr4 (147-242)||(44690279-44690374)
chr4 (122-265)||(38945011-38945159)
chr4 (124-246)||(24546720-24546844)
chr4 (128-200)||(29352444-29352517)
chr4 (147-243)||(39274956-39275052)
chr4 (147-265)||(42370307-42370424)
chr4 (121-223)||(44646560-44646665)
chr4 (148-210)||(2818355-2818417)
chr4 (148-266)||(51105918-51106036)
chr4 (147-233)||(53919863-53919949)
chr4 (181-265)||(44670822-44670907)
chr4 (150-246)||(1696200-1696296)
chr4 (152-200)||(4394908-4394956)
chr4 (183-223)||(12103875-12103915)
chr4 (146-210)||(25196130-25196194)
chr4 (144-268)||(41956420-41956544)
chr4 (152-216)||(45984086-45984149)
chr4 (123-210)||(49532299-49532388)
[»] chr5 (28 HSPs)
chr5 (148-262)||(27833286-27833400)
chr5 (123-265)||(34032083-34032228)
chr5 (123-266)||(25415856-25416002)
chr5 (132-251)||(36243381-36243499)
chr5 (152-223)||(26663635-26663706)
chr5 (152-223)||(26935230-26935301)
chr5 (145-243)||(36160312-36160410)
chr5 (146-244)||(3758194-3758294)
chr5 (124-231)||(2816147-2816257)
chr5 (147-231)||(17098213-17098297)
chr5 (122-265)||(141841-141974)
chr5 (125-265)||(779056-779198)
chr5 (152-249)||(11844244-11844340)
chr5 (147-222)||(32017454-32017529)
chr5 (158-266)||(39099875-39099988)
chr5 (147-233)||(8761922-8762008)
chr5 (121-221)||(8247033-8247136)
chr5 (148-221)||(14042459-14042532)
chr5 (125-223)||(3263717-3263818)
chr5 (149-207)||(14475051-14475109)
chr5 (147-233)||(27016666-27016752)
chr5 (145-243)||(37885612-37885709)
chr5 (123-161)||(2112513-2112553)
chr5 (145-246)||(10145352-10145453)
chr5 (152-260)||(33900215-33900323)
chr5 (174-234)||(967124-967184)
chr5 (152-200)||(22873471-22873519)
chr5 (125-210)||(24041071-24041158)
[»] chr6 (8 HSPs)
chr6 (122-263)||(30509283-30509427)
chr6 (122-260)||(3605013-3605155)
chr6 (144-265)||(12605981-12606101)
chr6 (163-265)||(13063874-13063976)
chr6 (150-238)||(10544617-10544702)
chr6 (49-101)||(24323271-24323323)
chr6 (145-200)||(34921560-34921615)
chr6 (145-237)||(30038862-30038953)
[»] chr3 (34 HSPs)
chr3 (148-265)||(48322199-48322316)
chr3 (124-261)||(38457214-38457352)
chr3 (145-261)||(40392386-40392501)
chr3 (181-251)||(40546356-40546427)
chr3 (163-261)||(46711911-46712009)
chr3 (143-260)||(46188578-46188694)
chr3 (169-265)||(52309185-52309281)
chr3 (147-265)||(30082852-30082972)
chr3 (152-261)||(31901808-31901916)
chr3 (124-245)||(25461440-25461564)
chr3 (145-261)||(31681114-31681229)
chr3 (145-261)||(31917465-31917580)
chr3 (147-239)||(37708432-37708524)
chr3 (164-266)||(24658428-24658530)
chr3 (150-248)||(50368418-50368514)
chr3 (168-242)||(5504809-5504885)
chr3 (159-265)||(47115306-47115413)
chr3 (147-231)||(8703341-8703425)
chr3 (147-231)||(9055228-9055312)
chr3 (121-223)||(49003102-49003203)
chr3 (123-195)||(45757897-45757972)
chr3 (123-188)||(29611988-29612056)
chr3 (152-254)||(44881986-44882087)
chr3 (145-223)||(53040462-53040540)
chr3 (123-223)||(30463992-30464093)
chr3 (145-265)||(39400270-39400390)
chr3 (123-199)||(46360607-46360685)
chr3 (150-233)||(53433211-53433294)
chr3 (183-237)||(55110058-55110112)
chr3 (124-167)||(8957586-8957630)
chr3 (141-197)||(11692722-11692778)
chr3 (183-223)||(18399194-18399234)
chr3 (185-245)||(38364029-38364089)
chr3 (123-191)||(46093618-46093689)
[»] chr8 (41 HSPs)
chr8 (144-251)||(22209398-22209505)
chr8 (148-265)||(36924031-36924149)
chr8 (126-264)||(2445118-2445258)
chr8 (147-267)||(27055905-27056025)
chr8 (119-261)||(7513292-7513437)
chr8 (123-265)||(32646789-32646931)
chr8 (158-261)||(40949364-40949467)
chr8 (150-265)||(5293737-5293852)
chr8 (126-223)||(7528262-7528360)
chr8 (145-269)||(24103041-24103164)
chr8 (152-246)||(23552842-23552934)
chr8 (146-260)||(12782771-12782885)
chr8 (123-260)||(20279553-20279693)
chr8 (123-260)||(21066180-21066320)
chr8 (147-261)||(8108244-8108359)
chr8 (126-257)||(37166993-37167125)
chr8 (163-247)||(39333510-39333594)
chr8 (125-243)||(42801049-42801169)
chr8 (125-216)||(37564374-37564468)
chr8 (169-265)||(39093102-39093198)
chr8 (163-245)||(7042945-7043028)
chr8 (179-250)||(40299675-40299746)
chr8 (122-271)||(39691101-39691253)
chr8 (142-259)||(43631468-43631584)
chr8 (121-225)||(36348522-36348629)
chr8 (148-210)||(42022641-42022703)
chr8 (123-191)||(11993804-11993873)
chr8 (214-251)||(34716515-34716552)
chr8 (122-186)||(40298848-40298915)
chr8 (156-240)||(1576380-1576464)
chr8 (183-223)||(5217793-5217833)
chr8 (146-266)||(39905673-39905794)
chr8 (125-206)||(9460428-9460512)
chr8 (121-210)||(35592406-35592497)
chr8 (125-224)||(42760181-42760282)
chr8 (185-250)||(67364-67424)
chr8 (150-231)||(21307619-21307700)
chr8 (152-189)||(30461322-30461359)
chr8 (148-260)||(2376726-2376838)
chr8 (123-206)||(7044383-7044467)
chr8 (183-223)||(38956915-38956955)
[»] scaffold0009 (1 HSPs)
scaffold0009 (146-266)||(189063-189183)
[»] chr7 (30 HSPs)
chr7 (144-265)||(1360528-1360649)
chr7 (145-265)||(33887846-33887965)
chr7 (150-267)||(3256618-3256736)
chr7 (144-265)||(10031914-10032035)
chr7 (164-271)||(37129798-37129906)
chr7 (163-265)||(42911071-42911173)
chr7 (147-207)||(23187247-23187307)
chr7 (181-265)||(42890256-42890340)
chr7 (129-231)||(28733784-28733889)
chr7 (1-120)||(4877353-4877472)
chr7 (145-265)||(24450497-24450616)
chr7 (164-230)||(44719424-44719490)
chr7 (152-261)||(9533516-9533625)
chr7 (184-261)||(48549915-48549991)
chr7 (195-266)||(28251964-28252035)
chr7 (148-244)||(41431104-41431201)
chr7 (125-249)||(9097704-9097830)
chr7 (150-206)||(39316073-39316129)
chr7 (124-224)||(7596180-7596283)
chr7 (160-263)||(35874645-35874748)
chr7 (166-247)||(15995902-15995984)
chr7 (123-260)||(34299741-34299881)
chr7 (158-251)||(40065790-40065886)
chr7 (144-205)||(5248087-5248148)
chr7 (125-166)||(26872877-26872918)
chr7 (122-223)||(18926295-18926398)
chr7 (125-206)||(31902801-31902884)
chr7 (127-210)||(35567088-35567172)
chr7 (144-188)||(46418360-46418404)
chr7 (123-223)||(47507578-47507681)
[»] scaffold0291 (1 HSPs)
scaffold0291 (146-268)||(11654-11776)
[»] scaffold1681 (1 HSPs)
scaffold1681 (123-200)||(646-725)
[»] scaffold0011 (1 HSPs)
scaffold0011 (144-210)||(219182-219248)
[»] scaffold0192 (1 HSPs)
scaffold0192 (126-220)||(15933-16030)


Alignment Details
Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 16717456 - 16717722
Alignment:
Q  1 tattaggaatctttgtatcaatcaattcatcattgatcttgtaattatatttcaatttgtcataatttcttgtttaagttttaggtttgatttgagaatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16717456 tattaggaatctttgtatcaatcaattcatcattgatcttgtaattatatttcaatttgtcataatttcttgtttaagttttaggtttgatttgagaatg 16717555  T
Q  101 tgta-gtcttgtaattaagtgatgggtcttgttaacgagtgct-cggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatat 198  Q
    | || |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| ||||| ||||||||||| | ||||||    
T  16717556 tataggtcttgtaattaagtgatgggtcttgttaacgagtgctccagacactctttaagcattctaaaataagtaattattctttaaaaaaattaaatat 16717655  T
Q  199 ttcgatttccaaagtattgattacatgcattttcataaatacttactacttattgtccttaaagagt 265  Q
    || ||||||||||| |||||||| |||||||||||||||||||||||||||||  ||||||||||||    
T  16717656 tttgatttccaaagcattgattatatgcattttcataaatacttactacttatgttccttaaagagt 16717722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 123 - 265
Target Start/End: Original strand, 3882584 - 3882729
Alignment:
Q  123 gggtcttgttaacgagtgctc---ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgat 219  Q
    ||||||||||||||||||| |   || ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||| ||| ||| | ||||||    
T  3882584 gggtcttgttaacgagtgccctcggggcactctttaagcattctaaaataagcaattattctttaaaaaggtcaaatatttcggttttcaatgcattgat 3882683  T
Q  220 tacatgcattttcataaatacttactacttattgtccttaaagagt 265  Q
    ||||  ||||||||| | |||||||||||||| || ||||||||||    
T  3882684 tacacacattttcatgagtacttactacttatggttcttaaagagt 3882729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 269
Target Start/End: Complemental strand, 2826066 - 2825945
Alignment:
Q  148 actctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactac 247  Q
    |||||||||||||  ||||||||| ||||| | ||||||||||| |||||||||||||||||| | ||||||||||  |||||| |||||||||||||||    
T  2826066 actctttaagcatactaaaataagaaattattttttaaaaaagtaaaatatttcgatttccaatgcattgattacacacatttttataaatacttactac 2825967  T
Q  248 ttattgtccttaaagagtaccc 269  Q
    |||| |  ||||||||||||||    
T  2825966 ttatagctcttaaagagtaccc 2825945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 144 - 264
Target Start/End: Complemental strand, 27948127 - 27948004
Alignment:
Q  144 ggacactctttaagcattttaaaataagcaattac--tctttaaaaaagtcaaatatttcgatttccaaagtattgatta-catgcattttcataaatac 240  Q
    |||||| |||||| | |||||||||||||||||||  |||||||||||||||||| ||||||||||||| | |||||||| ||  |||||||||||||||    
T  27948127 ggacacactttaaaccttttaaaataagcaattacattctttaaaaaagtcaaatgtttcgatttccaatgcattgattaacacacattttcataaatac 27948028  T
Q  241 ttactacttattgtccttaaagag 264  Q
    |||||||||||  |||||||||||    
T  27948027 ttactacttatgatccttaaagag 27948004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 147 - 269
Target Start/End: Original strand, 8964387 - 8964509
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttacta 246  Q
    |||| |||||||||| |||| |||| ||||| ||||||||||||| ||||||||| |||||||| | ||||||||||   ||||||||||||||||| ||    
T  8964387 cactgtttaagcattctaaattaagtaattattctttaaaaaagtaaaatatttcaatttccaatgcattgattacacaaattttcataaatacttatta 8964486  T
Q  247 cttattgtccttaaagagtaccc 269  Q
    | ||| |||||||||||||||||    
T  8964487 catatggtccttaaagagtaccc 8964509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 2888901 - 2889021
Alignment:
Q  145 gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttac 244  Q
    ||||||||||||||| || |||||  | ||||| | ||||||||||| |||||||||||||||||| ||||||| ||||  | ||||||||||||| |||    
T  2888901 gacactctttaagcacttcaaaatttgtaattattttttaaaaaagttaaatatttcgatttccaatgtattgactacacactttttcataaatacatac 2889000  T
Q  245 tacttattgtccttaaagagt 265  Q
    ||||||| |||||||||||||    
T  2889001 tacttatagtccttaaagagt 2889021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 123 - 261
Target Start/End: Complemental strand, 42924554 - 42924414
Alignment:
Q  123 gggtcttgttaacgagtg-ctcgga-cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgatt 220  Q
    ||||||||| |||||||| |||||  ||||||||||||||| ||||| ||| ||||| | || |||||| ||||||||||| |||| ||| |||||||||    
T  42924554 gggtcttgtcaacgagtgtctcggtgcactctttaagcattctaaaagaagtaattatttttaaaaaaaatcaaatatttcaattttcaacgtattgatt 42924455  T
Q  221 acatgcattttcataaatacttactacttattgtccttaaa 261  Q
    ||||||||||||||||||| |||||| |||| | |||||||    
T  42924454 acatgcattttcataaatatttactatttatggaccttaaa 42924414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 248
Target Start/End: Original strand, 18227092 - 18227218
Alignment:
Q  125 gtcttgttaacgagtg-ctcgg--acactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgatta 221  Q
    |||||||||||||||| ||| |  ||||||||||| |||| ||||||||| ||||| |||| | ||||||||||||||||||||| ||| | ||||||||    
T  18227092 gtcttgttaacgagtgtctccggaacactctttaaacattataaaataagtaattattcttcataaaagtcaaatatttcgattttcaatgcattgatta 18227191  T
Q  222 catgcattttcataaatacttactact 248  Q
     || |||||||||||||||||||||||    
T  18227192 aatacattttcataaatacttactact 18227218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 265
Target Start/End: Original strand, 27133072 - 27133189
Alignment:
Q  148 actctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactac 247  Q
    ||||||||| |||  ||||||||||||||| ||||||||||||||| | | |||||||||||| | |||||||| ||||||||| | ||| |||||||||    
T  27133072 actctttaaacatactaaaataagcaattattctttaaaaaagtcatacaattcgatttccaatgcattgattatatgcatttttaaaaacacttactac 27133171  T
Q  248 ttattgtccttaaagagt 265  Q
    |||| ||| |||||||||    
T  27133172 ttatagtctttaaagagt 27133189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 165 - 269
Target Start/End: Complemental strand, 35477782 - 35477677
Alignment:
Q  165 aaataagcaattactctttaaaaaa-gtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactacttattgtccttaaaga 263  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||   | |||| ||||||||||| | ||||||||||||||||| |  ||||||||    
T  35477782 aaataagcaattattctttaaaaaaagtcaaatatttcgatttccaagacaatgatgacatgcatttttaaaaatacttactacttataggtcttaaaga 35477683  T
Q  264 gtaccc 269  Q
    ||||||    
T  35477682 gtaccc 35477677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 37617499 - 37617396
Alignment:
Q  148 actctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactac 247  Q
    |||||||||||||||||||||||  ||||| ||||||||||| | ||||||||  ||||||||   ||||||| ||| |||||||||||| |||| ||||    
T  37617499 actctttaagcattttaaaataaataattattctttaaaaaaattaaatatttttatttccaatacattgattgcatacattttcataaacacttgctac 37617400  T
Q  248 ttat 251  Q
    ||||    
T  37617399 ttat 37617396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 164 - 265
Target Start/End: Original strand, 10824649 - 10824751
Alignment:
Q  164 aaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataa-atacttactacttattgtccttaaag 262  Q
    |||||||||| ||| ||||| ||||||||||| ||||  ||||||||  ||||||||||||| |||||||||| |||||||||| |||| ||| ||||||    
T  10824649 aaaataagcagttattcttttaaaaagtcaaacattttaatttccaagatattgattacatgtattttcataatatacttactaattatggtctttaaag 10824748  T
Q  263 agt 265  Q
    |||    
T  10824749 agt 10824751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 124 - 261
Target Start/End: Complemental strand, 11001580 - 11001441
Alignment:
Q  124 ggtcttgttaacgagtg-ct--cggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgatt 220  Q
    ||||||||||||||||| ||  || |||| ||| || |||||||||||||||||||| | |||||||| ||||||| ||||||||| |||  |||| |||    
T  11001580 ggtcttgttaacgagtgtcttccgaacacacttcaaacattttaaaataagcaattattttttaaaaa-gtcaaatgtttcgattttcaatatattaatt 11001482  T
Q  221 acatgcattttcataaatacttactacttattgtccttaaa 261  Q
    ||| |  |||||||||||||||||| | ||| |||||||||    
T  11001481 acacgttttttcataaatacttactccatatagtccttaaa 11001441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 265
Target Start/End: Complemental strand, 14102373 - 14102292
Alignment:
Q  184 aaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactacttattgtccttaaagagt 265  Q
    |||||||| ||||||||||||||||||   ||||||||||  | |||||||||||| ||||||||||| |||||||||||||    
T  14102373 aaaaaagttaaatatttcgatttccaatacattgattacacactttttcataaatagttactacttatagtccttaaagagt 14102292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 265
Target Start/End: Original strand, 13811010 - 13811152
Alignment:
Q  124 ggtcttgttaacgagtgctcgga--cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgatta 221  Q
    ||||||||| |||||||| ||||  |||||||||||||    |||| ||||||||| ||||||||||||| ||||||||  |||||||| | |||||| |    
T  13811010 ggtcttgtttacgagtgcccggaggcactctttaagcaacc-aaaacaagcaattattctttaaaaaagtaaaatattttaatttccaatgcattgatca 13811108  T
Q  222 catgcattttcataaatacttactacttattgtccttaaagagt 265  Q
    || | ||||| |||||||||| ||| |||| | |||||||||||    
T  13811109 cacgtatttttataaatactttctatttatagcccttaaagagt 13811152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 6581543 - 6581661
Alignment:
Q  146 acactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttact 245  Q
    |||||||||||||||| ||||||||| ||| | | ||||||||| |||||| ||| ||||  ||| | ||||||||||  | |||||||||||| |||||    
T  6581543 acactctttaagcattataaaataagtaataatt-tttaaaaaaatcaaatgttttgattctcaatgcattgattacacactttttcataaatagttact 6581641  T
Q  246 acttattgtccttaaagagt 265  Q
    |||||| || ||||||||||    
T  6581642 acttatagttcttaaagagt 6581661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 268
Target Start/End: Original strand, 39640134 - 39640256
Alignment:
Q  145 gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttac 244  Q
    |||||||||||||||||| |||||||  ||||| | ||||||||||| ||||||||| |  | |||  |||||| |||| ||||||||| |||||| |||    
T  39640134 gacactctttaagcatttcaaaataattaattattttttaaaaaagttaaatatttcaacattcaatatattgaatacacgcattttcagaaatacctac 39640233  T
Q  245 tacttattgtccttaaagagtacc 268  Q
     |||||| || |||||||||||||    
T  39640234 cacttatagt-cttaaagagtacc 39640256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 10204152 - 10204269
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgca-ttttcata--aatactta 243  Q
    |||||||||| ||||  |||||||  ||||| |||| |||||| |||||| ||||||||| ||| | |||||||||||||| ||||||||  |||| |||    
T  10204152 cactctttaaccattacaaaataaataattattcttcaaaaaattcaaatgtttcgattttcaatgcattgattacatgcatttttcatactaatattta 10204251  T
Q  244 ctacttattgtccttaaa 261  Q
    |||||||| |||||||||    
T  10204252 ctacttatggtccttaaa 10204269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 263
Target Start/End: Original strand, 45303518 - 45303629
Alignment:
Q  148 actctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactac 247  Q
    ||||||||||||||||||||| |||||||    |||  || ||| ||||||||  ||||  ||   |||||||||||||||||||||||||||||||||     
T  45303518 actctttaagcattttaaaatgagcaatt----tttttaatagtaaaatatttttattttaaagacattgattacatgcattttcataaatacttactat 45303613  T
Q  248 ttattgtccttaaaga 263  Q
    |||| |||||||||||    
T  45303614 ttatggtccttaaaga 45303629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 249
Target Start/End: Original strand, 18223106 - 18223211
Alignment:
Q  144 ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatactta 243  Q
    ||||||| |||||||||   |||| ||||||||| ||||||||||| |  |||||||| |||||||| | |||||||| | ||||||| ||||||||||     
T  18223106 ggacactttttaagcataccaaaacaagcaattattctttaaaaaaatagaatatttcaatttccaatgcattgattatacgcatttttataaatacttg 18223205  T
Q  244 ctactt 249  Q
    ||||||    
T  18223206 ctactt 18223211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 148 - 265
Target Start/End: Original strand, 19495200 - 19495316
Alignment:
Q  148 actctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactac 247  Q
    |||||||||  |||||||| |||| ||||| | ||| |||| ||||||||||||||||||||| | ||||||||||  |||||| |||||||||||  ||    
T  19495200 actctttaaatattttaaattaagtaattattattttaaaa-gtcaaatatttcgatttccaatgcattgattacacccatttttataaatacttaacac 19495298  T
Q  248 ttattgtccttaaagagt 265  Q
    ||||   |||||||||||    
T  19495299 ttatgacccttaaagagt 19495316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 260
Target Start/End: Original strand, 35312103 - 35312211
Alignment:
Q  152 tttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactacttat 251  Q
    |||||||||| |||||||| ||| |  ||||||||||| | ||||||||  |||| ||| ||||| ||||||| |||||| ||||||| |||||| ||||    
T  35312103 tttaagcattctaaaataaacaaattttctttaaaaaaattaaatattttaatttacaatgtattcattacatacatttttataaatatttactatttat 35312202  T
Q  252 tgtccttaa 260  Q
     ||||||||    
T  35312203 ggtccttaa 35312211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 18053155 - 18053054
Alignment:
Q  123 gggtcttgttaacgagtgctc---ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgat 219  Q
    |||||||||||||||||| ||   |||||||||||||| |||| |||| ||| ||||| | | |||||||||||||||||| ||||||| | | ||||||    
T  18053155 gggtcttgttaacgagtgttcctgggacactctttaaggatttcaaaagaagaaattattttataaaaaagtcaaatattttgatttccgatgcattgat 18053056  T
Q  220 ta 221  Q
    ||    
T  18053055 ta 18053054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 265
Target Start/End: Original strand, 25622502 - 25622646
Alignment:
Q  123 gggtcttgttaacgagtgctcg-ga--cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgat 219  Q
    |||||||||||||||||||||  ||  |||||||||| |||| |||| |||| ||||| | ||||||||  ||||||||| | |||| ||| | ||| ||    
T  25622502 gggtcttgttaacgagtgctcccgatgcactctttaaacattctaaattaagtaattatt-tttaaaaatatcaaatattacaattttcaatgcattaat 25622600  T
Q  220 tacatgcattttcataaatacttactacttattgtccttaaagagt 265  Q
    |||||   |||||||||||| ||||||||||| | |||||||||||    
T  25622601 tacatattttttcataaatatttactacttatagaccttaaagagt 25622646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 2517358 - 2517237
Alignment:
Q  145 gacactctttaagcattttaaaataagcaattactctttaaa-aaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatactta 243  Q
    ||||||||||||| ||| ||||||||||||||  | |||    ||| | ||||||||| |||| ||| | |||||||||| | |||||||||||||||||    
T  2517358 gacactctttaagtattctaaaataagcaatttttttttttttaaaataaaatatttcaattttcaatgcattgattacacgtattttcataaatactta 2517259  T
Q  244 ctacttattgtccttaaagagt 265  Q
    ||| ||||  ||||||||||||    
T  2517258 ctatttatgatccttaaagagt 2517237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 265
Target Start/End: Original strand, 6797189 - 6797310
Alignment:
Q  144 ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatactta 243  Q
    ||||||||||||| |||  |||||||| ||||||   |||||||||||||||||||| | ||| ||| | | | |||||||| ||||||||||||| ||     
T  6797189 ggacactctttaaacatactaaaataatcaattatcatttaaaaaagtcaaatattttgtttttcaatgcaataattacatgtattttcataaatatttg 6797288  T
Q  244 ctacttattgtccttaaagagt 265  Q
     || ||||  ||||||||||||    
T  6797289 ttatttatgatccttaaagagt 6797310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 233
Target Start/End: Complemental strand, 6761837 - 6761751
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttca 233  Q
    |||||||||||||||  |||| ||  ||| | ||| ||||||||||||||||||| |||||||| | |||||||||||  |||||||    
T  6761837 cactctttaagcattccaaaagaataaatcattctataaaaaagtcaaatatttcaatttccaatgcattgattacataaattttca 6761751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 14663293 - 14663228
Alignment:
Q  145 gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaa 210  Q
    |||||| ||||||||||||||| |||  ||||| |||||||| |||||||||| ||| ||||||||    
T  14663293 gacactttttaagcattttaaattaaaaaattattctttaaataagtcaaatagttcaatttccaa 14663228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 45076239 - 45076186
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatattt 200  Q
    |||||||||| |||  ||||||||||||||| ||||||||||||| ||||||||    
T  45076239 cactctttaaacatactaaaataagcaattattctttaaaaaagttaaatattt 45076186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 8773811 - 8773697
Alignment:
Q  123 gggtcttgttaacgagtgctc---ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgat 219  Q
    ||||||||||||||||| |||   || ||||||||||  ||| ||||| ||| ||||| | | |||||||||||||||||| ||||||  | | ||||||    
T  8773811 gggtcttgttaacgagtactctcggggcactctttaaagattctaaaagaagaaattattttataaaaaagtcaaatattttgatttctgatgcattgat 8773712  T
Q  220 tacatgcattttcat 234  Q
    |||||  ||||||||    
T  8773711 tacatatattttcat 8773697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 33276005 - 33275945
Alignment:
Q  146 acactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgattt 206  Q
    |||||||||||||||| ||||| ||| ||||| | ||||||||||| ||||||||| ||||    
T  33276005 acactctttaagcattctaaaacaagaaattattttttaaaaaagttaaatatttcaattt 33275945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 38786269 - 38786321
Alignment:
Q  214 attgattacatgcattttcataa-atacttactacttattgtccttaaagagt 265  Q
    |||||||| |||||||||||||| |||||||||| |||| |||||||||||||    
T  38786269 attgattagatgcattttcataatatacttactaattatagtccttaaagagt 38786321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 11742242 - 11742165
Alignment:
Q  123 gggtcttgttaacgagtg--ctcgg-acactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatat 198  Q
    ||||||||||||||||||  ||||| ||||| |||||| ||||||||| ||| ||||| ||| ||||||||||||||||    
T  11742242 gggtcttgttaacgagtgtcctcgggacact-tttaaggattttaaaaaaagaaattattctataaaaaagtcaaatat 11742165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 41079456 - 41079511
Alignment:
Q  146 acactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttc 201  Q
    |||||||||||| |||| |||||||| ||||| || |||||||||| |||||||||    
T  41079456 acactctttaagaatttcaaaataagaaattattccttaaaaaagttaaatatttc 41079511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 44195502 - 44195561
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgattt 206  Q
    |||||||||||||||||||| |||| ||||| |||||| |||||| ||||| ||| ||||    
T  44195502 cactctttaagcattttaaattaagaaattattctttacaaaagttaaataattcaattt 44195561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 205
Target Start/End: Complemental strand, 2393174 - 2393093
Alignment:
Q  126 tcttgttaacgagtgctc-gga-cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatt 205  Q
    |||||||||||||||||| ||| || |||||||| ||| ||||| ||| ||||| | | |||||||||||||||||| ||||    
T  2393174 tcttgttaacgagtgctccggagcattctttaaggattctaaaagaagaaattaatttataaaaaagtcaaatattttgatt 2393093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 237
Target Start/End: Original strand, 7271812 - 7271865
Alignment:
Q  184 aaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaa 237  Q
    |||||||||||||||||  |||||||| | |||||||||||  |||||||||||    
T  7271812 aaaaaagtcaaatatttttatttccaatgcattgattacatatattttcataaa 7271865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 195
Target Start/End: Complemental strand, 37313805 - 37313732
Alignment:
Q  123 gggtcttgttaacgagtg-ctcggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaa 195  Q
    |||||||||||||||||| ||  || ||| ||||||||||||||| |||| ||||  ||||||||||| |||||    
T  37313805 gggtcttgttaacgagtgtcttcgagactttttaagcattttaaattaagtaatttttctttaaaaaaatcaaa 37313732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 223
Target Start/End: Complemental strand, 20683134 - 20683032
Alignment:
Q  124 ggtcttgttaacgagtgctc---ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgatt 220  Q
    |||||||||||||||||| |   |||||||||||||| |||  |||| ||| ||  | | | ||||||| |||||||||||||||||| | | |||||||    
T  20683134 ggtcttgttaacgagtgcccccgggacactctttaaggattccaaaagaagaaaagattttataaaaaaatcaaatatttcgatttccgatgcattgatt 20683035  T
Q  221 aca 223  Q
    |||    
T  20683034 aca 20683032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 29866504 - 29866444
Alignment:
Q  183 taaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatactta 243  Q
    ||||| |||||||||||| |||||  ||  |||||| ||||| ||||||||||||||||||    
T  29866504 taaaacagtcaaatattttgattttaaatatattgaatacatacattttcataaatactta 29866444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 4e-35; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 123 - 269
Target Start/End: Complemental strand, 4521144 - 4520997
Alignment:
Q  123 gggtcttgttaacgagtgc-tcggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgatta 221  Q
    ||||||||||||||||||| |||| ||||||||||||||  ||||| |||| |||| ||||||||||||| ||| ||||| |||||||| | ||||||||    
T  4521144 gggtcttgttaacgagtgcctcgggcactctttaagcatactaaaacaagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 4521045  T
Q  222 catgcattttcataaatacttactacttattgtccttaaagagtaccc 269  Q
    |||| ||||| |||||||||| |||| ||| |||||||||||||||||    
T  4521044 catgtatttttataaatactttctacatatagtccttaaagagtaccc 4520997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 147 - 266
Target Start/End: Complemental strand, 33744246 - 33744127
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttacta 246  Q
    ||||||||||||||||||||||||| ||||| | ||| |||||||||||||||||||||| ||| | |||||||||||   ||||||||||||||| |||    
T  33744246 cactctttaagcattttaaaataagtaattatttttttaaaaagtcaaatatttcgattttcaatgcattgattacatattttttcataaatactttcta 33744147  T
Q  247 cttattgtccttaaagagta 266  Q
    ||||| ||| ||||||||||    
T  33744146 cttatagtcgttaaagagta 33744127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 128 - 265
Target Start/End: Original strand, 36621908 - 36622046
Alignment:
Q  128 ttgttaacgagtg-ctcggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgc 226  Q
    |||||||||| || ||| |||||||||||| ||||| |||||||||||||| ||||||||||||| |||||||| ||||||||||  | |||||||||||    
T  36621908 ttgttaacgaatgtctccgacactctttaaacatttcaaaataagcaattattctttaaaaaagttaaatattttgatttccaaaacaatgattacatgc 36622007  T
Q  227 attttcataaatacttactacttattgtccttaaagagt 265  Q
    ||||| | ||||||||| ||||||| |  ||||||||||    
T  36622008 atttttaaaaatacttattacttatgggtcttaaagagt 36622046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 147 - 264
Target Start/End: Complemental strand, 26322727 - 26322609
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataa-atacttact 245  Q
    ||||||||||||  ||||||||||||||||| |||| |||||| ||||| ||||||||||||||   ||||||||||||||||||||||| |||||||||    
T  26322727 cactctttaagctatttaaaataagcaattattcttaaaaaaaatcaaacatttcgatttccaagacattgattacatgcattttcataatatacttact 26322628  T
Q  246 acttattgtccttaaagag 264  Q
    | ||||  |||||||||||    
T  26322627 aattatgatccttaaagag 26322609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 265
Target Start/End: Complemental strand, 36321736 - 36321618
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttacta 246  Q
    ||||||||||||||   |||| ||| ||||| |||||| |||||| ||| |||||||||||||| | |||||||||||| ||||| |||||||||| |||    
T  36321736 cactctttaagcataccaaaacaagtaattattctttagaaaagttaaacatttcgatttccaatgcattgattacatgtatttttataaatacttgcta 36321637  T
Q  247 cttattgtccttaaagagt 265  Q
     |||| |||||||||||||    
T  36321636 tttatagtccttaaagagt 36321618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 8836603 - 8836486
Alignment:
Q  146 acactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttact 245  Q
    |||||||||||||||||  |||||| |||||| ||||||||||||||||||||||||||||  |  | ||| | ||| |||||||| ||||||||||||     
T  8836603 acactctttaagcatttcgaaataaacaattattctttaaaaaagtcaaatatttcgattt--agtgcattaaatacttgcatttttataaatacttacc 8836506  T
Q  246 acttattgtccttaaagagt 265  Q
    |||||| || ||||||||||    
T  8836505 acttatagttcttaaagagt 8836486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 48811928 - 48812031
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttacta 246  Q
    |||||||||||| | |||||||||| ||||| ||||| ||||||| ||||||||| || ||||| | |||||||||| ||||||| |||||||||| |||    
T  48811928 cactctttaagcctgttaaaataagtaattattcttttaaaaagtaaaatatttcaatctccaatgcattgattacacgcatttttataaatacttgcta 48812027  T
Q  247 ctta 250  Q
    ||||    
T  48812028 ctta 48812031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 7481481 - 7481379
Alignment:
Q  152 tttaagcattttaaaataagcaattactctttaaaaaa-gtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactactta 250  Q
    |||||||||  ||||||||||||||| ||||||||||| || ||||| |||||||| ||| ||||||||||||  ||||||| ||| |||||||||||||    
T  7481481 tttaagcatgctaaaataagcaattattctttaaaaaaagttaaatacttcgattttcaatgtattgattacacacattttcttaagtacttactactta 7481382  T
Q  251 ttg 253  Q
    |||    
T  7481381 ttg 7481379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 125 - 260
Target Start/End: Original strand, 17112673 - 17112814
Alignment:
Q  125 gtcttgttaacgagtgc--tcg-gacactctttaagcattttaaaataagcaattact---ctttaaaaaagtcaaatatttcgatttccaaagtattga 218  Q
    |||||||||||||||||  ||| | ||||||||||||||   |||||||| ||||| |   ||| ||||||||||||||||| ||||||||| | |||||    
T  17112673 gtcttgttaacgagtgccttcgaggcactctttaagcatggcaaaataagtaattattattcttcaaaaaagtcaaatattttgatttccaatgcattga 17112772  T
Q  219 ttacatgcattttcataaatacttactacttattgtccttaa 260  Q
    ||||||  ||||||||||||| ||| |||||||||| |||||    
T  17112773 ttacatatattttcataaatagttagtacttattgttcttaa 17112814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 40570657 - 40570774
Alignment:
Q  123 gggtcttgttaacgagtgctc---ggacactctttaagc-attttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattga 218  Q
    ||||||||||||||||||| |   || |||||||||||| ||   ||||| |||||||| ||||||||||||||||| |||||||||||| |   |||||    
T  40570657 gggtcttgttaacgagtgcccccggggcactctttaagctatccaaaaattagcaattattctttaaaaaagtcaaacatttcgatttcctagacattga 40570756  T
Q  219 ttacatgcattttcataa 236  Q
    ||||||||||||||||||    
T  40570757 ttacatgcattttcataa 40570774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 26687532 - 26687638
Alignment:
Q  146 acactctttaagcattttaaaataagcaatta-ctctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttac 244  Q
    |||||||||||||||| ||||||||||||| | || || ||||||||||||||||||||||| ||| | ||| ||||||  | |||||||||||| ||||    
T  26687532 acactctttaagcattctaaaataagcaataatcttttaaaaaaagtcaaatatttcgattttcaatgcattaattacacactttttcataaatagttac 26687631  T
Q  245 tacttat 251  Q
    | |||||    
T  26687632 tccttat 26687638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 128 - 265
Target Start/End: Complemental strand, 46830265 - 46830125
Alignment:
Q  128 ttgttaacgagtgctcg---gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacat 224  Q
    ||||||||||||||||    || |||||||||||||| |||||||| |||||| | || |||||||| |||| |||  |||| ||  | ||||||||||     
T  46830265 ttgttaacgagtgctcctgagatactctttaagcattataaaataaacaattatttttaaaaaaagttaaatgttttaattttcaccgcattgattacac 46830166  T
Q  225 gcattttcataaatacttactacttattgtccttaaagagt 265  Q
    |  |||||||||||||||||||||||| ||| |||||||||    
T  46830165 gttttttcataaatacttactacttatagtctttaaagagt 46830125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 148 - 265
Target Start/End: Complemental strand, 50670506 - 50670388
Alignment:
Q  148 actctttaagcattttaaaataagcaattactctttaaaaaag-tcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttacta 246  Q
    |||| ||||||||| |||||| | |||||| |||||||||||  |||||||||| | ||||||| | ||  |||||||||||||||||||||||||||||    
T  50670506 actccttaagcattctaaaatcaacaattattctttaaaaaaaatcaaatattttgttttccaatgcatctattacatgcattttcataaatacttacta 50670407  T
Q  247 cttattgtccttaaagagt 265  Q
     ||||  ||||| ||||||    
T  50670406 tttataatccttgaagagt 50670388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 263
Target Start/End: Original strand, 17554829 - 17554969
Alignment:
Q  125 gtcttgttaacgagtgctcgga--cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattac 222  Q
    |||| ||||||||||| ||||   |||||||||| ||||| ||||||| |||||| | ||||||||||| |||| |||| |||| ||| | ||||||||     
T  17554829 gtctcgttaacgagtgttcgggagcactctttaaacatttcaaaataaacaattattttttaaaaaagttaaatgtttcaatttacaatgcattgattat 17554928  T
Q  223 atgcattttcataaatacttactacttattgtccttaaaga 263  Q
    ||   |||||||||||| ||| ||||||| |||||||||||    
T  17554929 atattttttcataaatagttattacttatggtccttaaaga 17554969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 2633027 - 2633130
Alignment:
Q  148 actctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactac 247  Q
    ||||||||| |||| ||||||||||||| | | ||||||||||| |||| |||||||||||||  ||||||||| |  | |||||||||||| ||||| |    
T  2633027 actctttaaacattctaaaataagcaataattttttaaaaaagttaaatgtttcgatttccaatatattgattatacactttttcataaatagttactgc 2633126  T
Q  248 ttat 251  Q
    ||||    
T  2633127 ttat 2633130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 265
Target Start/End: Original strand, 14774100 - 14774215
Alignment:
Q  150 tctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactactt 249  Q
    |||||||||||| |||||||| |||||| |  || ||||| |||||||||||||||| ||| | ||||| || |  ||||||||||||||  ||||||||    
T  14774100 tctttaagcattctaaaataatcaattatttgtttaaaaaatcaaatatttcgattttcaatgcattgaatatacacattttcataaatatgtactactt 14774199  T
Q  250 attgtccttaaagagt 265  Q
    ||  ||||||||||||    
T  14774200 ataatccttaaagagt 14774215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 265
Target Start/End: Original strand, 4772017 - 4772135
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttacta 246  Q
    ||||||||||||||   |||  ||||||||| | ||| |||||||  ||||||||||||| ||| ||||| ||||||  |||||| |||||||||| |||    
T  4772017 cactctttaagcataccaaatgaagcaattatttttttaaaaagtagaatatttcgattttcaatgtattaattacacacatttttataaatacttgcta 4772116  T
Q  247 cttattgtccttaaagagt 265  Q
    ||||||| | |||||||||    
T  4772117 cttattgccattaaagagt 4772135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 244
Target Start/End: Complemental strand, 9221335 - 9221237
Alignment:
Q  146 acactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttac 244  Q
    |||||||||||  |||||||||||| |||||| |||||| |||||| |||||||||||||||||| | | | | ||||   ||||||||||||||||||    
T  9221335 acactctttaactattttaaaataaacaattattctttagaaaagttaaatatttcgatttccaatgcaattaatacacatattttcataaatacttac 9221237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 15549640 - 15549720
Alignment:
Q  185 aaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactacttattgtccttaaagagt 265  Q
    ||||||| |||||||||||||| ||| | ||||||||||  |||||| |||||||||| |||||||| ||| |||||||||    
T  15549640 aaaaagtaaaatatttcgattttcaatgcattgattacacacatttttataaatacttgctacttatagtctttaaagagt 15549720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 34445636 - 34445738
Alignment:
Q  122 tgggtcttgttaacgagtgctc--gga-cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattga 218  Q
    |||||||||||||||||||| |  ||| ||||||||||| |||  |||| ||| ||||| | | |||||||||||||||||||||||||||| | |||||    
T  34445636 tgggtcttgttaacgagtgcccccggagcactctttaaggattccaaaagaagaaattaatttataaaaaagtcaaatatttcgatttccaatgcattga 34445735  T
Q  219 tta 221  Q
    |||    
T  34445736 tta 34445738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 261
Target Start/End: Original strand, 37976796 - 37976936
Alignment:
Q  122 tgggtcttgttaacgagtgctc--ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgat 219  Q
    ||||||||| |||||||||| |  |||||||||||||||||| ||||||||  |||||  |||| |||||||||||||||| ||||| ||| || ||||     
T  37976796 tgggtcttgataacgagtgccccgggacactctttaagcattctaaaataaaaaattatacttt-aaaaagtcaaatattttgattttcaatgttttgaa 37976894  T
Q  220 tacatgcattttcataaatacttactacttattgtccttaaa 261  Q
    |||  | ||||| ||||||| | || | |||| |||||||||    
T  37976895 tacgcgtatttttataaatattaaccatttatagtccttaaa 37976936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 250
Target Start/End: Original strand, 47031476 - 47031582
Alignment:
Q  144 ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatactta 243  Q
    ||||||||||||| |||| ||||||||| ||||| | ||| ||||| | ||||||||||||||||||   ||| ||||||  | |||| | |||||||||    
T  47031476 ggacactctttaaacattctaaaataagtaattatttttttaaaaaataaaatatttcgatttccaatacattcattacacacgtttttacaaatactta 47031575  T
Q  244 ctactta 250  Q
    |||||||    
T  47031576 ctactta 47031582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 7549811 - 7549898
Alignment:
Q  123 gggtcttgttaacgagtg--ctcgg-acactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttc 207  Q
    ||||||||||||||||||  ||||| |||||||||||| |||| |||| ||| ||| | | | |||||||||||||||||||||||||    
T  7549811 gggtcttgttaacgagtgtcctcgggacactctttaagaatttcaaaagaagaaataattttataaaaaagtcaaatatttcgatttc 7549898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 210
Target Start/End: Complemental strand, 34861350 - 34861260
Alignment:
Q  123 gggtcttgttaacgagtgctc---ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaa 210  Q
    ||||||||||||||||||| |   || ||||||||||||||| |||| |||| ||||| | |||||||| |||||| ||||| ||||||||    
T  34861350 gggtcttgttaacgagtgccccgggggcactctttaagcattctaaattaagtaattattttttaaaaatgtcaaacatttcaatttccaa 34861260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 265
Target Start/End: Original strand, 37705847 - 37705990
Alignment:
Q  125 gtcttgttaacgagtgctc--gga-cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgatta 221  Q
    ||||||||||||||||| |  ||| |||||||||||||||  ||||| || ||||| | |||| |||| |||||| ||| ||||| ||| | ||| ||||    
T  37705847 gtcttgttaacgagtgcccccggagcactctttaagcattcgaaaatgagtaattattttttagaaaactcaaatgttttgattttcaatgcattaatta 37705946  T
Q  222 catgcattttcataaatacttactacttattgtccttaaagagt 265  Q
    || |  ||||||||||||||| |||||||| ||| || ||||||    
T  37705947 cacgttttttcataaatacttgctacttatagtcattgaagagt 37705990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 3047835 - 3047936
Alignment:
Q  123 gggtcttgttaacgagtgctc---ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgat 219  Q
    |||||||||||| |||||| |   || ||||||||||||||  |||| |||| ||||  |||||||||| ||||||| ||||||||||||| | ||||||    
T  3047835 gggtcttgttaaagagtgcccccggggcactctttaagcatgctaaattaagtaattgttctttaaaaatgtcaaatttttcgatttccaatgcattgat 3047934  T
Q  220 ta 221  Q
    ||    
T  3047935 ta 3047936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 251
Target Start/End: Complemental strand, 28672393 - 28672294
Alignment:
Q  153 ttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgca-ttttcataaatacttactacttat 251  Q
    ||||||||| |||||||| |||||| | |||||||||||||||||||| |||||  || | ||||||||||   | |||| ||||||||||| |||||||    
T  28672393 ttaagcattctaaaataaacaattattttttaaaaaagtcaaatattttgattttaaatgcattgattacacatattttttataaatacttattacttat 28672294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 34232847 - 34232766
Alignment:
Q  121 atgggtcttgttaacgagtgctc---ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatt 199  Q
    |||||||||||||||||||||||   |||||||||||||||||  | || | |||||||| ||||| |||||||||| ||||    
T  34232847 atgggtcttgttaacgagtgctcacgggacactctttaagcatccttaatttagcaattattcttttaaaaagtcaactatt 34232766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 44442241 - 44442304
Alignment:
Q  143 cggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgattt 206  Q
    |||||||| |||||| |||||||| || | ||||| ||||||||||||||||||||||| ||||    
T  44442241 cggacactttttaagtattttaaattaggaaattattctttaaaaaagtcaaatatttcaattt 44442304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 12590738 - 12590648
Alignment:
Q  150 tctttaagcattttaaaataagcaatta-ctctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaata 239  Q
    ||||||||||||||||| ||| |||||| || || |||||||| |||||||| ||||| ||| | ||||| |||| | |||||||||||||    
T  12590738 tctttaagcattttaaattaaacaattatctattaaaaaaagttaaatattttgattttcaatgcattgaatacacgtattttcataaata 12590648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 4039713 - 4039636
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacat 224  Q
    ||||||||||| |||  |||| ||  ||||| | | |||||||||||||||||||||||||||| | |||||||||||    
T  4039713 cactctttaaggattccaaaagaataaattattttataaaaaagtcaaatatttcgatttccaatgcattgattacat 4039636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 6285847 - 6285891
Alignment:
Q  153 ttaagcattttaaaataagcaattactctttaaaaaagtcaaata 197  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||||    
T  6285847 ttaaggattttaaaataagaaattattctttaaaaaagtcaaata 6285891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 64936 - 64881
Alignment:
Q  148 actctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcga 203  Q
    ||||||||| |||| |||||||| |||||| |||||||||| || |||||||||||    
T  64936 actctttaaacattctaaaataaacaattattctttaaaaacgttaaatatttcga 64881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 31807918 - 31807850
Alignment:
Q  123 gggtcttgttaacgagtg--ctcgga-cactctttaagcattttaaaataagcaattactctttaaaaa 188  Q
    ||||||||||||||||||  | |||| |||| |||||||||| ||||||||| ||||| ||||||||||    
T  31807918 gggtcttgttaacgagtgcccccggagcactatttaagcattctaaaataagtaattattctttaaaaa 31807850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 40203189 - 40203113
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattaca 223  Q
    ||||||||||| |||  |||| ||| ||||| |   ||||||||||||||||||| |||||||| | ||||||||||    
T  40203189 cactctttaaggattacaaaacaagaaattatttcataaaaaagtcaaatatttcaatttccaatgcattgattaca 40203113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 40619779 - 40619719
Alignment:
Q  185 aaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttact 245  Q
    |||||||||||||||| || || ||| | ||||||||||  ||||||| ||||||||||||    
T  40619779 aaaaagtcaaatattttgaatttcaatgcattgattacacacattttcttaaatacttact 40619719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 50343946 - 50343833
Alignment:
Q  148 actctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactac 247  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||  |||| ||| |||||||||| ||| |||||||||||| ||||||||    
T  50343946 actctttaagcattttaaaataagtaattattctttaaaaaagtcaaatattttaattttcaatgtattgattatatgtattttcataaattcttactac 50343847  T
Q  248 ttattgtccttaaa 261  Q
    |||  |||||||||    
T  50343846 ttacggtccttaaa 50343833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 144 - 265
Target Start/End: Complemental strand, 54700956 - 54700837
Alignment:
Q  144 ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatactta 243  Q
    |||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||| ||||||||| | | |||||||||||||||| | |||||||||    
T  54700956 ggacactctttaagcattttaaaataagtaattattctt--aaaaagtcaaatattttgatttccaaggcaatgattacatgcatttttaaaaatactta 54700859  T
Q  244 ctacttattgtccttaaagagt 265  Q
    |||||||| |  ||||||||||    
T  54700858 ctacttatgggtcttaaagagt 54700837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 16822371 - 16822277
Alignment:
Q  151 ctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttact 245  Q
    |||||| |||||||||||||||||||| | ||| ||||| ||||||||||| ||||||||  ||||| |||||||||||||||||||||||||||    
T  16822371 ctttaaacattttaaaataagcaattatttttttaaaaaatcaaatatttcaatttccaagatattgtttacatgcattttcataaatacttact 16822277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 123 - 265
Target Start/End: Complemental strand, 32055478 - 32055333
Alignment:
Q  123 gggtcttgttaacgagtgctc--ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatattt-cgatttccaaagtattgat 219  Q
    |||||||||| |||||||| |  || ||||||||||||||   |||| ||||||||| |||||| |||||||||| |||| |||||||||| | ||||||    
T  32055478 gggtcttgttgacgagtgcccccgggcactctttaagcatacaaaaacaagcaattattctttagaaaagtcaaacattttcgatttccaatgcattgat 32055379  T
Q  220 tacatgcattttcataaatacttactacttattgtccttaaagagt 265  Q
    |||||| ||||| |||||||||| ||| |||| |||||||||||||    
T  32055378 tacatgtatttttataaatacttgctatttatagtccttaaagagt 32055333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 37179682 - 37179800
Alignment:
Q  143 cggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatactt 242  Q
    ||||||||||||||||||   |||| ||| ||||| | |||| |||||||||| |||||||||||||| |||||||||| ||| ||||| ||||||||||    
T  37179682 cggacactctttaagcataccaaaacaagtaattattttttagaaaagtcaaacatttcgatttccaatgtattgattatatgtatttttataaatactt 37179781  T
Q  243 actacttattgtccttaaa 261  Q
     ||| |||| |||||||||    
T  37179782 gctatttatagtccttaaa 37179800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 42957086 - 42956958
Alignment:
Q  144 ggacactctttaagcattttaaaataagcaattactcttt-aaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatactt 242  Q
    ||||||||||||| |||| ||||||||||| ||| | ||| |||||| ||||||||||| |||||||| | ||| ||||||  |||||| ||||||||||    
T  42957086 ggacactctttaaacattctaaaataagcagttattattttaaaaaaatcaaatatttcaatttccaatgcattaattacacacatttttataaatactt 42956987  T
Q  243 actacttattgtccttaaagagtacccgg 271  Q
    ||||||| |  |||||||||||| |||||    
T  42956986 actacttgtgatccttaaagagtgcccgg 42956958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 265
Target Start/End: Complemental strand, 50086544 - 50086401
Alignment:
Q  124 ggtcttgttaacgagtgctc--ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgatta 221  Q
    |||||||||||||||||| |  ||| ||||||||| ||||  ||||||| |||||| ||||||||||| |||||||||| ||||| ||| | ||||| ||    
T  50086544 ggtcttgttaacgagtgccccgggaaactctttaaacattccaaaataaacaattattctttaaaaaaatcaaatattttgattttcaatgcattgaata 50086445  T
Q  222 catgcattttcataaatacttactacttattgtccttaaagagt 265  Q
    ||   |||||||||||| ||||| |||||| || ||||||||||    
T  50086444 cacatattttcataaatgcttaccacttatagttcttaaagagt 50086401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 123 - 265
Target Start/End: Original strand, 47560594 - 47560738
Alignment:
Q  123 gggtcttgttaacgagtgc--tcg-gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgat 219  Q
    ||||||||||||||||||   ||| |||||||||||| ||||  |||||||||||||| | ||||||||| |||||| ||| |||||  ||   ||||||    
T  47560594 gggtcttgttaacgagtgtcttcgagacactctttaatcattccaaaataagcaattatt-tttaaaaaaatcaaatgttttgatttttaatacattgat 47560692  T
Q  220 tacatgcattttcataaatacttactacttattgtccttaaagagt 265  Q
    |||| |||||||||| ||||||||||| |||| |||||||||||||    
T  47560693 tacacgcattttcattaatacttactatttatggtccttaaagagt 47560738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 147 - 269
Target Start/End: Original strand, 2137181 - 2137303
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttacta 246  Q
    |||||||||||||||||||||||||  |||| | ||||||||  |||||||||| |||||  ||  |||||||||||   ||||||||||||||||| ||    
T  2137181 cactctttaagcattttaaaataagttattattgtttaaaaatatcaaatattttgatttataatatattgattacacatattttcataaatacttatta 2137280  T
Q  247 cttattgtccttaaagagtaccc 269  Q
    |||||  | |||||| |||||||    
T  2137281 cttatgattcttaaacagtaccc 2137303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 10575981 - 10576062
Alignment:
Q  144 ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgc 226  Q
    |||||||||||||||||||||||||||| ||||| | ||| ||||| |||||||||| ||||||||| | |||||||||||||    
T  10575981 ggacactctttaagcattttaaaataagtaatta-tttttcaaaaaatcaaatattttgatttccaatgcattgattacatgc 10576062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 145 - 251
Target Start/End: Original strand, 50774954 - 50775060
Alignment:
Q  145 gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttac 244  Q
    |||||| |||||| ||| ||||||||| ||||| ||||||||||||| |||||||| ||||| |||  |||||||||||   ||||||||||||| |||     
T  50774954 gacactttttaagtattctaaaataagtaattattctttaaaaaagttaaatattttgattttcaacatattgattacacatattttcataaatatttat 50775053  T
Q  245 tacttat 251  Q
    |||||||    
T  50775054 tacttat 50775060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 264
Target Start/End: Complemental strand, 10095735 - 10095634
Alignment:
Q  163 taaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactacttattgtccttaaag 262  Q
    |||||||| ||||||   ||||||||| |||||||||||||||| ||| | | |||||||||||||||| ||||||| || ||||||||  |||||||||    
T  10095735 taaaataaacaattatcttttaaaaaaatcaaatatttcgattttcaatgcaatgattacatgcatttttataaatattttctacttatgatccttaaag 10095636  T
Q  263 ag 264  Q
    ||    
T  10095635 ag 10095634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 246
Target Start/End: Original strand, 2063442 - 2063569
Alignment:
Q  121 atgggtcttgttaacgagtgctc--ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattga 218  Q
    |||||||||||||||||||||||  |||||||||||||||||  |||| || | | ||| ||||||||||||||||| | ||| |||||||| ||||| |    
T  2063442 atgggtcttgttaacgagtgctcccggacactctttaagcatgctaaattaggaagttattctttaaaaaagtcaaacagttcaatttccaatgtattaa 2063541  T
Q  219 ttacatgcattttcataaatacttacta 246  Q
     ||||   ||||||||||| | ||||||    
T  2063542 atacacaaattttcataaaaagttacta 2063569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 242
Target Start/End: Complemental strand, 53737905 - 53737810
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatactt 242  Q
    |||||||||||| ||  |||||||| ||||| ||||||||||| |||||||||||||||||||| | ||||| ||||  | |||||| ||||||||    
T  53737905 cactctttaagcgttccaaaataagaaattattctttaaaaaattcaaatatttcgatttccaatgcattgaatacacacgttttcaaaaatactt 53737810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 39827260 - 39827144
Alignment:
Q  147 cactctttaagcattttaaaataagcaa-ttactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttact 245  Q
    |||||||||||||| | |||| |||||| ||| |||||||||| |||||| ||||| |||| |||   ||||||||| || | ||| |||||||||||||    
T  39827260 cactctttaagcatatcaaaacaagcaaattattctttaaaaatgtcaaaaatttcaattttcaattcattgattacttgtaattttataaatacttact 39827161  T
Q  246 acttattgtccttaaag 262  Q
    | |||| ||||||||||    
T  39827160 atttatagtccttaaag 39827144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 28005353 - 28005250
Alignment:
Q  148 actctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactac 247  Q
    ||||||||| |||  |||||||||||||||   |||||||||||||||||||| |||||| ||  |  | || | ||| |||||||||||||||||||||    
T  28005353 actctttaaacatactaaaataagcaattatcttttaaaaaagtcaaatattttgatttctaattttataataatatgtattttcataaatacttactac 28005254  T
Q  248 ttat 251  Q
    ||||    
T  28005253 ttat 28005250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 242
Target Start/End: Complemental strand, 44690374 - 44690279
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatactt 242  Q
    |||||||||| |||  ||||||||| |||||   ||||||||||| |||||||||||||| ||| ||| | |||||||  ||||||||||||||||    
T  44690374 cactctttaaacatactaaaataagtaattatcttttaaaaaagttaaatatttcgattttcaatgtaataattacatatattttcataaatactt 44690279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 265
Target Start/End: Complemental strand, 38945159 - 38945011
Alignment:
Q  122 tgggtcttgttaacgagtgctcg---gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaa-tatttcgatttccaaagtattg 217  Q
    |||||||||||||||||||| |    | ||||||||||||  |  ||| |||||||||| ||| | ||||||||||| | |||||||||||||   ||||    
T  38945159 tgggtcttgttaacgagtgcccccgcggcactctttaagctatccaaattaagcaattattctcttaaaaagtcaaactttttcgatttccaagacattg 38945060  T
Q  218 attacatgcattttcataa-atacttactacttattgtccttaaagagt 265  Q
    ||||| ||||||||||||| ||| |||||| |||| || ||||||||||    
T  38945059 attacttgcattttcataatatatttactaattatggttcttaaagagt 38945011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 24546844 - 24546720
Alignment:
Q  124 ggtcttgttaacgagtgctc--ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgatta 221  Q
    ||||||||||||||||||||  | ||||||||||||||| ||||| || | ||||| ||||||||||| ||||  | ||| |||||||| ||||| | ||    
T  24546844 ggtcttgttaacgagtgctctagaacactctttaagcatgttaaattaggaaattattctttaaaaaattcaagcagttcaatttccaatgtattaaata 24546745  T
Q  222 catgcattttcataaatacttacta 246  Q
    ||   ||||||||||| | ||||||    
T  24546744 cacaaattttcataaaaaattacta 24546720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 29352444 - 29352517
Alignment:
Q  128 ttgttaacgagtgctc-ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatattt 200  Q
    |||||||||| | ||| ||||||||||||| |||| ||||||||||||||| ||||| ||||| | ||||||||    
T  29352444 ttgttaacgaatactctggacactctttaatcattctaaaataagcaattattcttttaaaaaataaaatattt 29352517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 243
Target Start/End: Original strand, 39274956 - 39275052
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatactta 243  Q
    |||| ||||||||||  ||| ||| |||||| | ||| ||||| ||||||||||| |||||||| | ||||| || | ||||||| |||||||||||    
T  39274956 cactatttaagcattcaaaagtaaacaattatttttttaaaaaatcaaatatttcaatttccaatgcattgaatagacgcattttgataaatactta 39275052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 265
Target Start/End: Complemental strand, 42370424 - 42370307
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgca-ttttcataaatacttact 245  Q
    ||||||||||||||   |||| ||||||||| ||||| ||||||| ||||||||  |||| ||| | ||| |||||||||| |||| |||||||||| ||    
T  42370424 cactctttaagcataccaaaacaagcaattattcttt-aaaaagtaaaatattttaattttcaatgcattaattacatgcattttttataaatacttgct 42370326  T
Q  246 acttattgtccttaaagagt 265  Q
    | |||| | |||||||||||    
T  42370325 atttatag-ccttaaagagt 42370307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 223
Target Start/End: Complemental strand, 44646665 - 44646560
Alignment:
Q  121 atgggtcttgttaacgagtgctc---ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattg 217  Q
    ||||||||||||||||||||| |   || || |||||||| |||| |||| ||| || || | | ||| |||||||||||||||||||||| | | ||||    
T  44646665 atgggtcttgttaacgagtgcccccggggcattctttaaggatttcaaaagaagaaactattttataataaagtcaaatatttcgatttccgatgcattg 44646566  T
Q  218 attaca 223  Q
    ||||||    
T  44646565 attaca 44646560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 2818355 - 2818417
Alignment:
Q  148 actctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaa 210  Q
    ||||||||||||||||||| |||| ||||| ||||| |||| |||||| | ||| ||||||||    
T  2818355 actctttaagcattttaaattaagaaattattcttttaaaaggtcaaaaagttcaatttccaa 2818417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 266
Target Start/End: Original strand, 51105918 - 51106036
Alignment:
Q  148 actctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactac 247  Q
    |||||||||  ||| |||||||| |||||| | ||||||||||||||||||||  |||| |||   |  ||||||    ||||||||||||| ||||||     
T  51105918 actctttaaatattctaaaataaacaattattatttaaaaaagtcaaatattttaattttcaatacacggattacgcatattttcataaatagttactat 51106017  T
Q  248 ttattgtccttaaagagta 266  Q
    |||| || |||||||||||    
T  51106018 ttatggttcttaaagagta 51106036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 233
Target Start/End: Original strand, 53919863 - 53919949
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttca 233  Q
    |||||||||||||||| |||| ||  ||||| ||| ||||||||||||| ||||| |||||| | | ||||||| |||  |||||||    
T  53919863 cactctttaagcatttcaaaagaataaattattctataaaaaagtcaaaaatttcaatttccgatgcattgattgcattaattttca 53919949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 44670907 - 44670822
Alignment:
Q  181 tttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaata-cttactacttattgtccttaaagagt 265  Q
    ||||||||| | |||||||||||||||||| | | | |||||||  ||||| |||||||  || |||||||| |||||||||||||    
T  44670907 tttaaaaaaattaaatatttcgatttccaatgcaataattacatatatttttataaatattttcctacttatggtccttaaagagt 44670822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 246
Target Start/End: Complemental strand, 1696296 - 1696200
Alignment:
Q  150 tctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttacta 246  Q
    |||||||| || |||||| |||  |||| ||  |||||||| |||||||||| |||||| | | ||||||||||| |||||||| ||| | ||||||    
T  1696296 tctttaagtatattaaaagaagatattattccataaaaaagacaaatatttcaatttccgatgcattgattacatacattttcaaaaaaagttacta 1696200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 4394908 - 4394956
Alignment:
Q  152 tttaagcattttaaaataagcaattactctttaaaaaagtcaaatattt 200  Q
    ||||| ||||||||| |||| ||||| ||||||||||| ||||||||||    
T  4394908 tttaaacattttaaattaagtaattattctttaaaaaaatcaaatattt 4394956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 12103915 - 12103875
Alignment:
Q  183 taaaaaagtcaaatatttcgatttccaaagtattgattaca 223  Q
    ||||||||||||||| |||||||||||||  ||||||||||    
T  12103915 taaaaaagtcaaataattcgatttccaaaacattgattaca 12103875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 25196130 - 25196194
Alignment:
Q  146 acactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaa 210  Q
    |||||||||||| ||| ||||| ||  ||||| | | |||||||||||||||||| |||||||||    
T  25196130 acactctttaaggattctaaaagaaaaaattaatttataaaaaagtcaaatattttgatttccaa 25196194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 268
Target Start/End: Complemental strand, 41956544 - 41956420
Alignment:
Q  144 ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatactta 243  Q
    |||||||||||||||| |  |||||||| || || ||||||| ||| | ||||||||| |||| ||| | ||||||||||    |||||||||| | |||    
T  41956544 ggacactctttaagcaatccaaaataagaaagtattctttaagaaatttaaatatttcaattttcaacgcattgattacacaatttttcataaaaattta 41956445  T
Q  244 ctacttattgtccttaaagagtacc 268  Q
    ||| | |  | ||||||||||||||    
T  41956444 ctattaaaagcccttaaagagtacc 41956420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 45984149 - 45984086
Alignment:
Q  152 tttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtatt 216  Q
    ||||| |||||||||||||  ||||| ||||||||||| | |||||||| ||||||||| |||||    
T  45984149 tttaaacattttaaaataaataattattctttaaaaaa-ttaaatattttgatttccaatgtatt 45984086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 210
Target Start/End: Complemental strand, 49532388 - 49532299
Alignment:
Q  123 gggtcttgttaacgagtgctc---ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaa 210  Q
    ||||||||||||||||||| |   ||||||||| ||||||||  ||| |||| ||||| |||||| |||| ||||||| ||| ||||||||    
T  49532388 gggtcttgttaacgagtgcccccgggacactctgtaagcattccaaattaagaaattattctttataaaa-tcaaataattcaatttccaa 49532299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 8e-30; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 148 - 262
Target Start/End: Complemental strand, 27833400 - 27833286
Alignment:
Q  148 actctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactac 247  Q
    |||| ||||||||||||||  || |||||| |||||| ||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||     
T  27833400 actcattaagcattttaaatgaatcaattattctttacaaaagtcaaatatttcgatttacaatgcattgattacatgcattttcataaatacttactat 27833301  T
Q  248 ttattgtccttaaag 262  Q
    || | ||||||||||    
T  27833300 ttgtggtccttaaag 27833286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 123 - 265
Target Start/End: Complemental strand, 34032228 - 34032083
Alignment:
Q  123 gggtcttgttaacgagtgctc---ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgat 219  Q
    ||||||||||||||||||  |   || ||||||||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||| || | | ||||    
T  34032228 gggtcttgttaacgagtgtccttggggcactctttaagcattctaaaataagtaattattctttaaaaaagttaaatatttcaatttcaaaggcaatgat 34032129  T
Q  220 tacatgcattttcataaatacttactacttattgtccttaaagagt 265  Q
    |||||||||||| | ||||||||||||||||| |  ||||||||||    
T  34032128 tacatgcatttttaaaaatacttactacttatgggtcttaaagagt 34032083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 123 - 266
Target Start/End: Complemental strand, 25416002 - 25415856
Alignment:
Q  123 gggtcttgttaacgagtgct--cgga-cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgat 219  Q
    ||||||||||||||||||||  |||  |||||||||| ||||||||||| || |||||  ||||||||||||||||||||||||||||  |   ||||||    
T  25416002 gggtcttgttaacgagtgctaccggcgcactctttaaacattttaaaattagtaattatactttaaaaaagtcaaatatttcgatttctgattaattgat 25415903  T
Q  220 tacatgcattttcataaatacttactacttattgtccttaaagagta 266  Q
    || || |||||  |||||||||||||||| ||  |||||||||||||    
T  25415902 tagatacatttctataaatacttactactcatgatccttaaagagta 25415856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 251
Target Start/End: Original strand, 36243381 - 36243499
Alignment:
Q  132 taacgagtgctcg-gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattt 230  Q
    ||||||||||||| ||||||||||||| |||| |||||||  ||||| | ||||||||| |||||||||| |||||  || | |||||||||||||||||    
T  36243381 taacgagtgctcgagacactctttaagtattt-aaaataaataattattatttaaaaaa-tcaaatattttgatttttaatgcattgattacatgcattt 36243478  T
Q  231 tcataaatacttactacttat 251  Q
    ||||||| |||||||||||||    
T  36243479 tcataaacacttactacttat 36243499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 26663635 - 26663706
Alignment:
Q  152 tttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattaca 223  Q
    |||||||||| ||||||||| ||||| | |||||||||||||||||||||||||||||| ||||||||||||    
T  26663635 tttaagcattctaaaataagaaattattttttaaaaaagtcaaatatttcgatttccaatgtattgattaca 26663706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 26935230 - 26935301
Alignment:
Q  152 tttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattaca 223  Q
    |||||||||| ||||||||| ||||| | |||||||||||||||||||||||||||||| ||||||||||||    
T  26935230 tttaagcattctaaaataagaaattattttttaaaaaagtcaaatatttcgatttccaatgtattgattaca 26935301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 36160312 - 36160410
Alignment:
Q  145 gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatactta 243  Q
    ||||||||||||||||| ||||||||||||||| | |||||||||||||||| ||| ||||| |||  |||| |||||| |  ||||||||||||||||    
T  36160312 gacactctttaagcattctaaaataagcaattattttttaaaaaagtcaaatgttttgattttcaatatattaattacacgatttttcataaatactta 36160410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 244
Target Start/End: Original strand, 3758194 - 3758294
Alignment:
Q  146 acactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattga--ttacatgcattttcataaatactta 243  Q
    ||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||| ||| | |||||   |||||   ||||||||||||||||    
T  3758194 acactctttaaacattttaaaataatcaattattctttaaaaaagtcaaatatttcgattttcaatgcattgaatatacattttttttcataaatactta 3758293  T
Q  244 c 244  Q
    |    
T  3758294 c 3758294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 2816147 - 2816257
Alignment:
Q  124 ggtcttgttaacgagtgctc---ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgatt 220  Q
    |||||||||||||||||||    ||  ||||||||||||||| |||| ||||||||| ||||||||||| ||||||||||| |||| |||   | |||||    
T  2816147 ggtcttgttaacgagtgctaccggggtactctttaagcatttcaaaagaagcaattattctttaaaaaaatcaaatatttcaattttcaagacaatgatt 2816246  T
Q  221 acatgcatttt 231  Q
    |||||||||||    
T  2816247 acatgcatttt 2816257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 17098297 - 17098213
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcatttt 231  Q
    |||||||||| |||   |||||||||||||| | ||||||||||||||||||||||||||||||   | ||||||||| ||||||    
T  17098297 cactctttaaacatcacaaaataagcaattattatttaaaaaagtcaaatatttcgatttccaagacaatgattacattcatttt 17098213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 265
Target Start/End: Original strand, 141841 - 141974
Alignment:
Q  122 tgggtcttgttaacgagtgctcg-gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgatt 220  Q
    ||||| |||||||||||||| |  ||||||||||||||||   ||||||| |||||| ||||| |||||||||| |||||| ||||          ||||    
T  141841 tgggttttgttaacgagtgccccagacactctttaagcataccaaaataaacaattattcttttaaaaagtcaa-tatttcaattt----------gatt 141929  T
Q  221 acatgcattttcataaatacttactacttattgtccttaaagagt 265  Q
    | || |||||||||||||||||| ||||||| |||||||||||||    
T  141930 agatacattttcataaatacttattacttatggtccttaaagagt 141974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 265
Target Start/End: Original strand, 779056 - 779198
Alignment:
Q  125 gtcttgttaacgagtgctc---ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgatta 221  Q
    ||||||||||||||||| |   || |||||||||| ||||  ||||| || ||||| | |||||||| || |||| ||||||||||||| | ||||||||    
T  779056 gtcttgttaacgagtgccccctgggcactctttaaacattcaaaaattagtaattattttttaaaaa-gttaaatgtttcgatttccaatgcattgatta 779154  T
Q  222 catgcattttcataaatacttactacttattgtccttaaagagt 265  Q
    ||  | ||||| ||||||| ||||| |||| ||||||| |||||    
T  779155 cacactttttcgtaaatacatactatttatagtccttagagagt 779198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 249
Target Start/End: Original strand, 11844244 - 11844340
Alignment:
Q  152 tttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactactt 249  Q
    ||||||||||||||| ||| || ||| |||||||||| || ||||||||  ||||||||   |||||||| ||||||||||||||| | |||||||||    
T  11844244 tttaagcattttaaattaaacagttattctttaaaaa-gttaaatattttaatttccaatacattgattatatgcattttcataaacatttactactt 11844340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 222
Target Start/End: Complemental strand, 32017529 - 32017454
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattac 222  Q
    |||||||||| ||| | |||| ||||||||| ||||||||||||| ||||||||| |||| ||| | |||||||||    
T  32017529 cactctttaaacatatcaaaacaagcaattattctttaaaaaagtaaaatatttcaattttcaatgcattgattac 32017454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 266
Target Start/End: Original strand, 39099875 - 39099988
Alignment:
Q  158 cattttaaaataagcaattactc-tttaaaaaagt-caaatatttcgatttccaaagtattgattacatgcattttcataaatacttactacttatt--- 252  Q
    ||||||||||||| |||||| || ||||||||||| ||||||||||||||| ||| | || || ||||   ||||| |||||||||||| |||||||       
T  39099875 cattttaaaataaacaattattcctttaaaaaagttcaaatatttcgattttcaatgcatcgaatacacatatttttataaatacttaccacttattata 39099974  T
Q  253 gtccttaaagagta 266  Q
    ||||||||||||||    
T  39099975 gtccttaaagagta 39099988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 233
Target Start/End: Original strand, 8761922 - 8762008
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttca 233  Q
    ||||||||||| ||| ||||| ||| ||||| ||| ||||||||| ||||||||| |||| ||| |||||||| ||||  |||||||    
T  8761922 cactctttaaggattctaaaaaaagaaattattctataaaaaagttaaatatttcaattttcaatgtattgatgacataaattttca 8762008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 8247033 - 8247136
Alignment:
Q  121 atgggtcttgttaacgagtgctcg---gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattg 217  Q
    ||||||||||||||||||||| |    ||||||||||||| |||  |||| ||| ||| | | | |||||||||||||||||||||||||| | | ||||    
T  8247033 atgggtcttgttaacgagtgcccccgtgacactctttaaggattccaaaagaagaaataattttataaaaaagtcaaatatttcgatttccgatgcattg 8247132  T
Q  218 atta 221  Q
    ||||    
T  8247133 atta 8247136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 14042459 - 14042532
Alignment:
Q  148 actctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgatta 221  Q
    |||||||||  ||| ||||||||  ||||| | |||||||||||||||||||| ||||||||| | ||||||||    
T  14042459 actctttaaagattctaaaataataaattattatttaaaaaagtcaaatattttgatttccaatgcattgatta 14042532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 223
Target Start/End: Original strand, 3263717 - 3263818
Alignment:
Q  125 gtcttgttaacgagtgctc---ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgatta 221  Q
    ||||||||||||||||||    || ||||||||||| |||| |||| ||| ||| | | | ||||||||||||| |||||||||||| | | ||||||||    
T  3263717 gtcttgttaacgagtgcttccggggcactctttaagaatttcaaaagaagaaatcattttataaaaaagtcaaagatttcgatttccgatgcattgatta 3263816  T
Q  222 ca 223  Q
    ||    
T  3263817 ca 3263818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 14475109 - 14475051
Alignment:
Q  149 ctctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttc 207  Q
    ||||| ||||||||||||| ||| ||||| ||| |||||| |||||||||||| |||||    
T  14475109 ctcttcaagcattttaaaagaagaaattattctataaaaatgtcaaatatttcaatttc 14475051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 233
Target Start/End: Original strand, 27016666 - 27016752
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttca 233  Q
    |||||||||||||||  |||| ||| ||||| ||  ||||||||||||| ||||| |||||||| | || ||||||||  |||||||    
T  27016666 cactctttaagcattccaaaagaagaaattattccataaaaaagtcaaaaatttcaatttccaatgcatcgattacattaattttca 27016752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 37885612 - 37885709
Alignment:
Q  145 gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatactta 243  Q
    |||||| ||||| ||||||||||||| ||||||   ||||||||| | ||||||||| ||||  ||  |||| |||||| ||||||| |||||||||||    
T  37885612 gacactttttaaacattttaaaataaacaattaggttttaaaaaa-ttaaatatttcaatttttaatatattaattacacgcatttttataaatactta 37885709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 2112513 - 2112553
Alignment:
Q  123 gggtcttgttaacgagtgc--tcggacactctttaagcatt 161  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  2112513 gggtcttgttaacgagtgccctcggacactctttaagcatt 2112553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 246
Target Start/End: Complemental strand, 10145453 - 10145352
Alignment:
Q  145 gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttac 244  Q
    |||||||||||||||    |||||||  || || ||||||||||||| |||||||| |||||  || | ||| ||||||  |||||| ||||||||||||    
T  10145453 gacactctttaagcacaccaaaataaataaatattctttaaaaaagtaaaatattttgattttgaatgcattaattacacacatttttataaatacttac 10145354  T
Q  245 ta 246  Q
    ||    
T  10145353 ta 10145352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 260
Target Start/End: Original strand, 33900215 - 33900323
Alignment:
Q  152 tttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacat-gcattttcataaatacttactactta 250  Q
    ||||||||||||||||||| ||| || | ||| ||||||||||||||||| ||| |||| | ||| |||||||    |||||||||||| |||||  |||    
T  33900215 tttaagcattttaaaataaacaa-taattttttaaaaagtcaaatatttcaattcccaatgcattaattacatatttttttcataaatagttactcttta 33900313  T
Q  251 ttgtccttaa 260  Q
    | ||||||||    
T  33900314 tagtccttaa 33900323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 967124 - 967184
Alignment:
Q  174 attactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcat 234  Q
    |||| ||||||||||| ||||||| ||| |||||||| | ||||| |||||| ||||||||    
T  967124 attattctttaaaaaattcaaatagttcaatttccaatgcattgaatacatgaattttcat 967184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 22873471 - 22873519
Alignment:
Q  152 tttaagcattttaaaataagcaattactctttaaaaaagtcaaatattt 200  Q
    |||||| ||||||||||||  ||||| ||||||||||||| ||||||||    
T  22873471 tttaagtattttaaaataaagaattattctttaaaaaagttaaatattt 22873519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 24041158 - 24041071
Alignment:
Q  125 gtcttgttaacgagtgctc--ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaa 210  Q
    |||||||||||||||||||  ||  ||||||||||||| | ||| || | ||||| ||||||||||| ||||||| ||  ||||||||    
T  24041158 gtcttgttaacgagtgctccggggtactctttaagcatatcaaattatgaaattattctttaaaaaattcaaatagtttaatttccaa 24041071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 263
Target Start/End: Original strand, 30509283 - 30509427
Alignment:
Q  122 tgggtcttgttaacgagtg-ctcgg--acactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattga 218  Q
    ||||||||||||||||||| ||| |  |||||||||||||||   |||||||||||||| ||||||||||| ||||| |||||||||| ||| | |||||    
T  30509283 tgggtcttgttaacgagtgtctccggaacactctttaagcataccaaaataagcaattattctttaaaaaaatcaaacatttcgattttcaatgcattga 30509382  T
Q  219 ttacatgcattttcataaatacttactacttattgtccttaaaga 263  Q
    ||||||| ||||| |||||||||| ||| |||| |||||||||||    
T  30509383 ttacatgtatttttataaatacttgctatttatagtccttaaaga 30509427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 260
Target Start/End: Complemental strand, 3605155 - 3605013
Alignment:
Q  122 tgggtcttgttaacgagtg--ctc-ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattga 218  Q
    |||||||||||||||||||   || |||||||||||||||  || ||||||| |||||| ||| ||| |||||||||||||||||||||||||  ||| |    
T  3605155 tgggtcttgttaacgagtgtcatcgggacactctttaagctattcaaaataaacaattattctctaagaaagtcaaatatttcgatttccaaaacattaa 3605056  T
Q  219 ttacatgcattttcataa-atacttactacttattgtccttaa 260  Q
    || ||||||||||||||| ||| |||||| |||| ||||||||    
T  3605055 ttgcatgcattttcataatatatttactaattatggtccttaa 3605013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 265
Target Start/End: Complemental strand, 12606101 - 12605981
Alignment:
Q  144 ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatactta 243  Q
    ||||||||||||| |||||||||||||||| |||| ||||  |||||| |||||||| ||||| ||| | |||||||| | || ||||||||||||||||    
T  12606101 ggacactctttaaacattttaaaataagcagttac-ctttttaaaagtaaaatatttggattttcaatgcattgattatacgctttttcataaatactta 12606003  T
Q  244 ctacttattgtccttaaagagt 265  Q
    ||| ||||  |||| |||||||    
T  12606002 ctatttatgctcctaaaagagt 12605981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 265
Target Start/End: Complemental strand, 13063976 - 13063874
Alignment:
Q  163 taaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactacttattgtccttaaag 262  Q
    |||||||| |||| | | |||||||||||||||| ||  |||||||||   ||||||||||  | |||||||||||| |||||| |||| ||||||||||    
T  13063976 taaaataaacaataattttttaaaaaagtcaaatgttgtgatttccaatacattgattacacactttttcataaatagttactatttatagtccttaaag 13063877  T
Q  263 agt 265  Q
    |||    
T  13063876 agt 13063874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 10544702 - 10544617
Alignment:
Q  150 tctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaat 238  Q
    ||||||||||||||||| ||| |||||| | |||  |||||| |||||||| ||||| ||| ||||| | |||||||||||||||||||    
T  10544702 tctttaagcattttaaattaaacaattatttttt--aaaagttaaatattttgattt-caatgtattaaatacatgcattttcataaat 10544617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 24323271 - 24323323
Alignment:
Q  49 atttcaatttgtcataatttcttgtttaagttttaggtttgatttgagaatgt 101  Q
    |||||||||||| ||||| |||||| ||||| ||| |||||||||||||||||    
T  24323271 atttcaatttgtgataatctcttgtctaagtgttaagtttgatttgagaatgt 24323323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 34921560 - 34921615
Alignment:
Q  145 gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatattt 200  Q
    |||| |||||| ||||| |||||||| |||||| ||||||||||||| ||||||||    
T  34921560 gacattctttaggcattctaaaataatcaattattctttaaaaaagttaaatattt 34921615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 30038862 - 30038953
Alignment:
Q  145 gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaa 237  Q
    ||||||||||||| ||||||||||||| ||||| | | || |||||| ||||| || ||||| ||||  | |||||||||  |||||||||||    
T  30038862 gacactctttaagaattttaaaataagaaattattttatataaaagttaaatagtttgattttcaaaaca-tgattacatatattttcataaa 30038953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 265
Target Start/End: Complemental strand, 48322316 - 48322199
Alignment:
Q  148 actctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactac 247  Q
    |||||||||||||| ||||||||| ||||| | ||| |||||||||||| |||||||||||||   ||||||||||||  ||||||||||||| ||||||    
T  48322316 actctttaagcattctaaaataagtaattatttttttaaaaagtcaaatgtttcgatttccaatacattgattacatgttttttcataaatacctactac 48322217  T
Q  248 ttattgtccttaaagagt 265  Q
    |||| |||||||||||||    
T  48322216 ttatggtccttaaagagt 48322199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 124 - 261
Target Start/End: Complemental strand, 38457352 - 38457214
Alignment:
Q  124 ggtcttgttaacgagtgctc--ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgatta 221  Q
    ||||||||||||||||||||  ||||| |||||||||||| || |||||||||||| ||||||||||| | |||||||| ||||| ||| | ||||||||    
T  38457352 ggtcttgttaacgagtgctccaggacattctttaagcattctataataagcaattattctttaaaaaatt-aaatattttgattttcaatgcattgatta 38457254  T
Q  222 catgcattttcataaatacttactacttattgtccttaaa 261  Q
    |||| |||||| ||||||||||||| |||| || ||||||    
T  38457253 catgtattttcgtaaatacttactatttatggttcttaaa 38457214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 145 - 261
Target Start/End: Original strand, 40392386 - 40392501
Alignment:
Q  145 gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttac 244  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||||||| ||||||||  ||||| || | |||||||||||  ||||||||||||| ||||    
T  40392386 gacactctttaagtattttaaaa-aagtaattactctttaaaaaagttaaatatttttatttctaatgcattgattacatatattttcataaatatttac 40392484  T
Q  245 tacttattgtccttaaa 261  Q
    |||||||  ||||||||    
T  40392485 tacttatgttccttaaa 40392501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 40546356 - 40546427
Alignment:
Q  181 tttaaaaaagtcaaatatttcgatttccaaagtattgattacatgca-ttttcataaatacttactacttat 251  Q
    |||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||    
T  40546356 tttaaaaaagtcaaatatttcgatttccaatgcattgattacatgcatttttcataaatacttactacttat 40546427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 46712009 - 46711911
Alignment:
Q  163 taaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactacttattgtccttaaa 261  Q
    ||||||||| ||||| ||||||||||||||||| |||| ||||||||| | |||||||||||||||||| ||||||||||  || |||| |||||||||    
T  46712009 taaaataagtaattattctttaaaaaagtcaaacattttgatttccaatgcattgattacatgcatttttataaatacttgttatttatggtccttaaa 46711911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 143 - 260
Target Start/End: Complemental strand, 46188694 - 46188578
Alignment:
Q  143 cggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatactt 242  Q
    |||||| | ||||||||||  |||||||| ||||| | ||||| ||||||||||||| |||||| | | | ||||| |||||||||||||||||||||||    
T  46188694 cggacagtttttaagcattccaaaataagtaattattgtttaagaaagtcaaatatt-cgattttcgatgcattgactacatgcattttcataaatactt 46188596  T
Q  243 actacttattgtccttaa 260  Q
    ||||||||| ||||||||    
T  46188595 actacttatggtccttaa 46188578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 52309185 - 52309281
Alignment:
Q  169 aagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactacttattgtccttaaagagt 265  Q
    ||||||||| |||||||||| || |||||||||||||||||| | |||||||||| | ||||| |||||||||| |||||||| | |||||||||||    
T  52309185 aagcaattattctttaaaaaggtaaaatatttcgatttccaatgcattgattacacgtatttttataaatacttgctacttatagcccttaaagagt 52309281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 265
Target Start/End: Original strand, 30082852 - 30082972
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaa--aagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttac 244  Q
    ||||||||||||||| ||||||||||| ||| |||||||||  |||||||||||||| ||| | |||| | |||||||||| ||||| | ||||||||||    
T  30082852 cactctttaagcattctaaaataagcagttattctttaaaaaaaagtcaaatatttcaattcctaaagaaatgattacatggatttttaaaaatacttac 30082951  T
Q  245 tacttattgtccttaaagagt 265  Q
    || |||| |  ||||||||||    
T  30082952 tatttataggtcttaaagagt 30082972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 31901916 - 31901808
Alignment:
Q  152 tttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactacttat 251  Q
    ||||| |||| ||||||||| ||||| | |||||||| |||| |||||| |||||| ||  ||||||||||||||||||||||||||||||| || ||||    
T  31901916 tttaaacattctaaaataagtaattattgtttaaaaa-gtcatatattttgatttctaatatattgattacatgcattttcataaatacttattatttat 31901818  T
Q  252 tgtccttaaa 261  Q
     |||||||||    
T  31901817 ggtccttaaa 31901808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 124 - 245
Target Start/End: Original strand, 25461440 - 25461564
Alignment:
Q  124 ggtcttgttaacgagtgc-tcgga-cactctttaagcattttaaaataagcaattactctttaaaaaagtc-aaatatttcgatttccaaagtattgatt 220  Q
    |||||||||||||||||| ||||  |||||||||| ||||  ||||||||| |||| |||||||||||||| ||||||||| |||||||| | | |||||    
T  25461440 ggtcttgttaacgagtgcctcggggcactctttaaacattgcaaaataagccattattctttaaaaaagtcaaaatatttcaatttccaaggcaatgatt 25461539  T
Q  221 acatgcattttcataaatacttact 245  Q
    |||||||||||   |||||||||||    
T  25461540 acatgcattttttaaaatacttact 25461564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 145 - 261
Target Start/End: Original strand, 31681114 - 31681229
Alignment:
Q  145 gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttac 244  Q
    |||||||||||| |||| ||||||||| ||||| | |||||||| | || |||||| |||||| ||   ||||||||||||||||||||||||||||||     
T  31681114 gacactctttaaacattataaaataagtaattattgtttaaaaa-gccatatattttgatttctaatacattgattacatgcattttcataaatacttat 31681212  T
Q  245 tacttattgtccttaaa 261  Q
    || || |||||||||||    
T  31681213 tattttttgtccttaaa 31681229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 145 - 261
Target Start/End: Complemental strand, 31917580 - 31917465
Alignment:
Q  145 gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttac 244  Q
    |||||||||||| |||| ||||||||| ||||| | |||||||| | || |||||| |||||| ||   ||||||||||||||||||||||||||||||     
T  31917580 gacactctttaaacattataaaataagtaattattgtttaaaaa-gccatatattttgatttctaatacattgattacatgcattttcataaatacttat 31917482  T
Q  245 tacttattgtccttaaa 261  Q
    || || |||||||||||    
T  31917481 tattttttgtccttaaa 31917465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 147 - 239
Target Start/End: Original strand, 37708432 - 37708524
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaata 239  Q
    |||||||||||||| |||||||||||||||| ||||||||||||| ||| ||||| |||| ||| | | |||||||||| ||||| |||||||    
T  37708432 cactctttaagcatattaaaataagcaattagtctttaaaaaagttaaacatttcaattttcaatgcactgattacatgtatttttataaata 37708524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 266
Target Start/End: Complemental strand, 24658530 - 24658428
Alignment:
Q  164 aaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataa-atacttactacttattgtccttaaag 262  Q
    |||||||| ||||| ||||||||||||| ||||||||||||||| ||  |||| |||||||||| |||||||| ||||| |||| |||| || |||||||    
T  24658530 aaaataagaaattattctttaaaaaagttaaatatttcgatttctaagatattaattacatgca-tttcataatatactaactatttatggttcttaaag 24658432  T
Q  263 agta 266  Q
    ||||    
T  24658431 agta 24658428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 248
Target Start/End: Complemental strand, 50368514 - 50368418
Alignment:
Q  150 tctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactact 248  Q
    |||||||  ||||||||||||| ||||| |||||||||||||||||||||| |||||| |  | |||||||| ||  ||||| ||||||||||||||||    
T  50368514 tctttaaagattttaaaataagtaattattctttaaaaaagtcaaatattttgatttctattgcattgattatat--atttttataaatacttactact 50368418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 5504885 - 5504809
Alignment:
Q  168 taagcaattactctttaaaaaagtcaaatatttcgatttccaaagtatt--gattacatgcattttcataaatactt 242  Q
    |||||| ||| ||||||||||||||||||||||| ||||  || |||||  ||||||||||||||||||||||||||    
T  5504885 taagcagttattctttaaaaaagtcaaatatttcaatttttaaggtattatgattacatgcattttcataaatactt 5504809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 265
Target Start/End: Complemental strand, 47115413 - 47115306
Alignment:
Q  159 attttaaaataagcaattact-ctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactacttattgtcct 257  Q
    |||||||| |||||||||| | |||| ||||| |||||| ||| ||||| ||| | ||||||||||||  |||| ||||||||||| || |||| |||||    
T  47115413 attttaaagtaagcaattatttcttttaaaaaatcaaatgttttgattttcaatgcattgattacatgttttttgataaatacttattatttatggtcct 47115314  T
Q  258 taaagagt 265  Q
    ||||||||    
T  47115313 taaagagt 47115306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 8703425 - 8703341
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcatttt 231  Q
    ||||| ||||||||| ||||||||||||||  | ||||||||||| |||||||| |||||| || | | | ||||||||||||||    
T  8703425 cactcgttaagcattctaaaataagcaattgttatttaaaaaagttaaatattttgatttctaaggcaatcattacatgcatttt 8703341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 9055312 - 9055228
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcatttt 231  Q
    ||||| ||||||||| ||||||||||||||  | ||||||||||| |||||||| |||||| || | | | ||||||||||||||    
T  9055312 cactcgttaagcattctaaaataagcaattgttatttaaaaaagttaaatattttgatttctaaggcaatcattacatgcatttt 9055228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 223
Target Start/End: Complemental strand, 49003203 - 49003102
Alignment:
Q  121 atgggtcttgttaacgagtgctcgga-cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgat 219  Q
    ||||||||||||||||||||  |||  |||||||||||||||||| || ||  ||||| ||  ||||||||||||| ||||| |||||||| ||||| ||    
T  49003203 atgggtcttgttaacgagtgtccggggcactctttaagcattttataagaa--aattattccataaaaaagtcaaagatttcaatttccaatgtattaat 49003106  T
Q  220 taca 223  Q
    ||||    
T  49003105 taca 49003102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 195
Target Start/End: Original strand, 45757897 - 45757972
Alignment:
Q  123 gggtcttgttaacgagtg-ctc-gga-cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaa 195  Q
    |||||||||||||||||| ||| ||| |||||||||||||| ||||| |||||||||| |||||||||| ||||||    
T  45757897 gggtcttgttaacgagtgtctccggatcactctttaagcatgttaaattaagcaattattctttaaaaatgtcaaa 45757972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 29611988 - 29612056
Alignment:
Q  123 gggtcttgttaacgagtgctc---ggacactctttaagcattttaaaataagcaattactctttaaaaa 188  Q
    ||||||||||||||||||| |   ||||||||||||| |||| ||||||||| ||||| ||||||||||    
T  29611988 gggtcttgttaacgagtgcccccgggacactctttaaacattctaaaataagtaattattctttaaaaa 29612056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 254
Target Start/End: Complemental strand, 44882087 - 44881986
Alignment:
Q  152 tttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactacttat 251  Q
    |||||| |||||||||||| |||||| |||||  |||||| |||||||| ||||| | ||  ||||| |||||| ||||| | |||||||||| ||||||    
T  44882087 tttaagtattttaaaataaacaattattctttttaaaagttaaatattttgattttc-aacaattgaatacatgtatttttacaaatacttaccacttat 44881989  T
Q  252 tgt 254  Q
    |||    
T  44881988 tgt 44881986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 53040462 - 53040540
Alignment:
Q  145 gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattaca 223  Q
    ||||||||||||| ||| |||| |||| ||||| | ||||||||| ||||||| ||| |||||||| ||||||| ||||    
T  53040462 gacactctttaaggattctaaattaagaaattattatttaaaaaattcaaatacttcaatttccaatgtattgaataca 53040540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 223
Target Start/End: Complemental strand, 30464093 - 30463992
Alignment:
Q  123 gggtcttgttaacgagtgctcgga-cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgatta 221  Q
    |||||||||||||||||| ||||  ||||| |||||||||  |||| ||| ||||| ||| ||||||||||||| ||||| ||||  || | ||||||||    
T  30464093 gggtcttgttaacgagtgttcggggcactcgttaagcattccaaaagaagaaattattctataaaaaagtcaaacatttcaatttttaatgcattgatta 30463994  T
Q  222 ca 223  Q
    ||    
T  30463993 ca 30463992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 39400390 - 39400270
Alignment:
Q  145 gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttac 244  Q
    ||||||||||||| ||  ||||||||  ||||| |||||||| |||| ||| ||||  |||| ||| | ||| |||||||| ||||| ||||||||||      
T  39400390 gacactctttaagtatactaaaataattaattattctttaaacaagttaaacattttaattttcaatgcattaattacatgtatttttataaatactttt 39400291  T
Q  245 tacttattgtccttaaagagt 265  Q
    ||| ||| || ||||||||||    
T  39400290 tacatatagttcttaaagagt 39400270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 199
Target Start/End: Complemental strand, 46360685 - 46360607
Alignment:
Q  123 gggtcttgttaacgagtg--ctcggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatt 199  Q
    |||| ||| |||||||||  ||| ||||||||||||||||| |||| || | ||||||| |||||||||| ||||||||    
T  46360685 gggttttgataacgagtgttctcagacactctttaagcattataaattaggtaattactatttaaaaaagacaaatatt 46360607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 233
Target Start/End: Complemental strand, 53433294 - 53433211
Alignment:
Q  150 tctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttca 233  Q
    ||||| |||||||||||| ||| ||||| ||| ||||||||||||||||||  |||| | | | |||||||||||  |||||||    
T  53433294 tcttttagcattttaaaagaagaaattattctataaaaaagtcaaatattttaattttcgatgcattgattacataaattttca 53433211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 55110058 - 55110112
Alignment:
Q  183 taaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaa 237  Q
    ||||||| |||||||||||||||| ||| | |||||||||||  |||||||||||    
T  55110058 taaaaaaatcaaatatttcgattttcaatgcattgattacatatattttcataaa 55110112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 8957586 - 8957630
Alignment:
Q  124 ggtcttgttaacgagtgc-tcggacactctttaagcattttaaaa 167  Q
    |||||||||||||||||| |||| ||||||||||||||| |||||    
T  8957586 ggtcttgttaacgagtgcctcgggcactctttaagcattataaaa 8957630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 11692722 - 11692778
Alignment:
Q  141 ctcggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaata 197  Q
    |||||| ||||||||||||| ||||| |||  ||||| ||||||||||||| |||||    
T  11692722 ctcggatactctttaagcatattaaattaaaaaattattctttaaaaaagtgaaata 11692778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 18399234 - 18399194
Alignment:
Q  183 taaaaaagtcaaatatttcgatttccaaagtattgattaca 223  Q
    |||||||||||||||||||||||||| | | ||||||||||    
T  18399234 taaaaaagtcaaatatttcgatttccgatgcattgattaca 18399194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 38364089 - 38364029
Alignment:
Q  185 aaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttact 245  Q
    ||||| |||||||||||||||| || || |||||||||||| |||||| | | ||||||||    
T  38364089 aaaaaatcaaatatttcgattttcagagcattgattacatgtattttcgtgagtacttact 38364029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 46093689 - 46093618
Alignment:
Q  123 gggtcttgttaacgagtgct--cgga-cactctttaagcattttaaaataagcaattactctttaaaaaagt 191  Q
    ||||||||||||||||||||  |||| ||||||||||  || ||||| | |||||||| |||||||||||||    
T  46093689 gggtcttgttaacgagtgctttcggaacactctttaatgatattaaatttagcaattattctttaaaaaagt 46093618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 5e-28; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 144 - 251
Target Start/End: Original strand, 22209398 - 22209505
Alignment:
Q  144 ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatactta 243  Q
    |||||||||||||||||||||||| ||||||||| || |||||||||| |||||||| |||||||||   |||||||||||  |||||||||||||||||    
T  22209398 ggacactctttaagcattttaaaagaagcaattattccttaaaaaagttaaatattttgatttccaagacattgattacatatattttcataaatactta 22209497  T
Q  244 ctacttat 251  Q
    ||| ||||    
T  22209498 ctatttat 22209505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 148 - 265
Target Start/End: Original strand, 36924031 - 36924149
Alignment:
Q  148 actctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataa-atacttacta 246  Q
    |||||||||||  |  |||| ||| ||||| |||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||| || |||||||    
T  36924031 actctttaagctatcaaaaacaagaaattattctttaaaaaagtcaaatatttcgatttccaaaacattaattacatgcattttcataatattcttacta 36924130  T
Q  247 cttattgtccttaaagagt 265  Q
    ||||| || ||||||||||    
T  36924131 cttatggttcttaaagagt 36924149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 126 - 264
Target Start/End: Complemental strand, 2445258 - 2445118
Alignment:
Q  126 tcttgttaacgagtgc--tcggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattaca 223  Q
    |||||||||||||||   ||||||||| ||||| |||||||||||||||||||| | |||  |||||| |||||||||||||| ||| | | |  |||||    
T  2445258 tcttgttaacgagtgtcttcggacactttttaatcattttaaaataagcaattattttttttaaaagttaaatatttcgattttcaaggcaatcgttaca 2445159  T
Q  224 tgcattttcataaatacttactacttattgtccttaaagag 264  Q
    || ||||| |||||||||||||||||||  |||||||||||    
T  2445158 tgtatttttataaatacttactacttataatccttaaagag 2445118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 27055905 - 27056025
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttacta 246  Q
    ||||||||||||||||||||||||| ||||| |    || ||||| |||| ||||||||||||| ||||||||||||    |||||||||||| ||||||    
T  27055905 cactctttaagcattttaaaataagaaattatttcaaaagaaagttaaatgtttcgatttccaatgtattgattacacattttttcataaataattacta 27056004  T
Q  247 cttattgtccttaaagagtac 267  Q
    ||||| |||||||||||||||    
T  27056005 cttatagtccttaaagagtac 27056025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 119 - 261
Target Start/End: Complemental strand, 7513437 - 7513292
Alignment:
Q  119 tgatgggtcttgttaacgagtgctc---ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtat 215  Q
    ||||| |||||||||||||||| ||   || |||||||||||||| | |||| ||||||||| |||||| |||| | ||| |||||||||| ||| | ||    
T  7513437 tgatgtgtcttgttaacgagtgttcccggggcactctttaagcatatcaaaacaagcaattattctttagaaaaattaaacatttcgattttcaatgcat 7513338  T
Q  216 tgattacatgcattttcataaatacttactacttattgtccttaaa 261  Q
    |||||||||| ||||| |||||||||| ||| |||| |||||||||    
T  7513337 tgattacatgtatttttataaatacttgctatttatagtccttaaa 7513292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 123 - 265
Target Start/End: Original strand, 32646789 - 32646931
Alignment:
Q  123 gggtcttgttaacgagtgctc-ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgatta 221  Q
    ||||||||||||||| ||||| ||||| | ||||| ||||||||||||| |||||| ||||| ||||||||||||||||  ||||  || | ||||||||    
T  32646789 gggtcttgttaacgaatgctccggacattttttaaacattttaaaataaacaattattcttttaaaaagtcaaatattttaatttttaatgcattgatta 32646888  T
Q  222 catgcattttcataaatacttactacttattgtccttaaagagt 265  Q
    |||  | |||||||||||||||||||||||  || |||||||||    
T  32646889 catata-tttcataaatacttactacttatgatcattaaagagt 32646931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 261
Target Start/End: Original strand, 40949364 - 40949467
Alignment:
Q  158 cattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactacttattgtcct 257  Q
    |||||||||||||  ||||| |||| | ||||||| |||||||||||||||||  |||| |||||||||||||| ||||||||||||||||||  |||||    
T  40949364 cattttaaaataaataattattcttcataaaagtctaatatttcgatttccaatatattaattacatgcatttttataaatacttactacttaaggtcct 40949463  T
Q  258 taaa 261  Q
    ||||    
T  40949464 taaa 40949467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 150 - 265
Target Start/End: Complemental strand, 5293852 - 5293737
Alignment:
Q  150 tctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactactt 249  Q
    |||||||||||||||||||||| ||||  |||||| |||||| |||||||| |||||  || | | | |||||||||||||||||||||||||  | |||    
T  5293852 tctttaagcattttaaaataagtaattgttctttataaaagttaaatattttgatttttaatgcaataattacatgcattttcataaatacttcttgctt 5293753  T
Q  250 attgtccttaaagagt 265  Q
    || |||||||||||||    
T  5293752 atggtccttaaagagt 5293737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 7528360 - 7528262
Alignment:
Q  126 tcttgttaacgagtgctcg-gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattaca 223  Q
    |||||||||||||||  || |||||| |||||||||||||||||||| ||||| ||||||  ||||||||||||||||||||||||   ||||||||||    
T  7528360 tcttgttaacgagtgtccgtgacactttttaagcattttaaaataagtaattattctttacgaaagtcaaatatttcgatttccaatacattgattaca 7528262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 145 - 269
Target Start/End: Complemental strand, 24103164 - 24103041
Alignment:
Q  145 gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttac 244  Q
    ||||||||||||||||| ||||||||| ||||| | ||| |||| ||||||| ||||||||||| | | | ||||||| |   |||||| ||||||||||    
T  24103164 gacactctttaagcattctaaaataagaaattatttttttaaaaggtcaaatgtttcgatttccgatgcaatgattacgt-atttttcacaaatacttac 24103066  T
Q  245 tacttattgtccttaaagagtaccc 269  Q
    ||||||| ||||||||||| |||||    
T  24103065 tacttatagtccttaaagaataccc 24103041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 246
Target Start/End: Complemental strand, 23552934 - 23552842
Alignment:
Q  152 tttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttacta 246  Q
    |||||||||||||||||||||||||| | ||||||||  |||| |||||| |||| |||  ||||||||||||| |||||| |||||||||||||    
T  23552934 tttaagcattttaaaataagcaattattttttaaaaa--tcaagtatttcaattttcaagatattgattacatgaattttcgtaaatacttacta 23552842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 146 - 260
Target Start/End: Original strand, 12782771 - 12782885
Alignment:
Q  146 acactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttact 245  Q
    |||||||||||||||  ||||||| ||||||| |||||||||||||  ||||||||||||||||| | | | |  |||  |||||||||||||| ||||     
T  12782771 acactctttaagcatactaaaatatgcaattattctttaaaaaagttgaatatttcgatttccaatgcaattaacacacacattttcataaatatttacc 12782870  T
Q  246 acttattgtccttaa 260  Q
    |||||| ||||||||    
T  12782871 acttatagtccttaa 12782885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 123 - 260
Target Start/End: Complemental strand, 20279693 - 20279553
Alignment:
Q  123 gggtcttgttaacgagtgctc---ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgat 219  Q
    ||||||||||||| ||||| |   || ||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| |||| |||   ||| |     
T  20279693 gggtcttgttaacaagtgcccccggggcactctttaagcattctaaaataagcaattattctttcaaaaagtcaaatatttcaattttcaatacattaaa 20279594  T
Q  220 tacatgcattttcataaatacttactacttattgtccttaa 260  Q
    |||| |||||||  |||||| |||| |||||| ||| ||||    
T  20279593 tacacgcatttttttaaatatttaccacttatggtctttaa 20279553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 123 - 260
Target Start/End: Complemental strand, 21066320 - 21066180
Alignment:
Q  123 gggtcttgttaacgagtgctc---ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgat 219  Q
    ||||||||||||| ||||| |   || ||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| |||| |||   ||| |     
T  21066320 gggtcttgttaacaagtgcccccggggcactctttaagcattctaaaataagcaattattctttcaaaaagtcaaatatttcaattttcaatacattaaa 21066221  T
Q  220 tacatgcattttcataaatacttactacttattgtccttaa 260  Q
    |||| |||||||  |||||| |||| |||||| ||| ||||    
T  21066220 tacacgcatttttttaaatatttaccacttatggtctttaa 21066180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 8108359 - 8108244
Alignment:
Q  147 cactctttaagcattttaaaataagcaa-ttactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttact 245  Q
    ||||||||||||||| |||||||| ||| ||| || |||||||||| |||||||| |||||   |  |||||||||||  ||||||||||||||||| ||    
T  8108359 cactctttaagcattctaaaataaacaagttattcattaaaaaagttaaatattttgattttggatatattgattacacacattttcataaatactttct 8108260  T
Q  246 acttattgtccttaaa 261  Q
    ||||||  ||||||||    
T  8108259 acttataatccttaaa 8108244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 37166993 - 37167125
Alignment:
Q  126 tcttgttaacgagtgct--cggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattaca 223  Q
    ||||||||||||||| |  || ||||||||||| ||||| ||||||| |||||| |||| |||||| | ||||| |||||||||||| | ||||| ||||    
T  37166993 tcttgttaacgagtgtttccgaacactctttaaacatttcaaaataaacaattattcttcaaaaaatt-aaatagttcgatttccaatgcattgaataca 37167091  T
Q  224 tgcattttcataaatacttactacttattgtcct 257  Q
     |||||||||| |||| |||| | |||| |||||    
T  37167092 cgcattttcatgaatagttaccatttatggtcct 37167125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 39333594 - 39333510
Alignment:
Q  163 taaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataa-atacttactac 247  Q
    ||||||||||||||| |||| |||||||||||| |||||||||| |||   |||||||||||||||||||| || |||||||||||    
T  39333594 taaaataagcaattattcttcaaaaaagtcaaacatttcgattt-caagacattgattacatgcattttcaaaatatacttactac 39333510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 42801049 - 42801169
Alignment:
Q  125 gtcttgttaacgagtgctcgg--acactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattac 222  Q
    ||||||||||||||||| | |  ||||| |||||| ||| ||||||||| ||||| |||||| ||||| |||||||||| |||| ||| | ||| |||||    
T  42801049 gtcttgttaacgagtgccccgtgacactttttaagtattctaaaataagtaattattctttacaaaaggcaaatatttcaattttcaatgcattaattac 42801148  T
Q  223 atgcattttcataaatactta 243  Q
    |  ||||||||||| ||||||    
T  42801149 acacattttcataagtactta 42801169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 216
Target Start/End: Complemental strand, 37564468 - 37564374
Alignment:
Q  125 gtcttgttaacgagtgc---tcggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtatt 216  Q
    |||||||||||||||||   | ||||||||||||| |||  |||| |||| ||||| ||||||||||||||||||| ||| |||||||| |||||    
T  37564468 gtcttgttaacgagtgcctctgggacactctttaaacatgctaaattaagaaattattctttaaaaaagtcaaatagttcaatttccaatgtatt 37564374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 39093102 - 39093198
Alignment:
Q  169 aagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactacttattgtccttaaagagt 265  Q
    ||||||||| |||||||||||||  |||||||||| |||||| | |||||||||| ||||||| |||||||  | ||||||||   |||||||||||    
T  39093102 aagcaattattctttaaaaaagtataatatttcgagttccaatgcattgattacacgcatttttataaatatgtgctacttatatcccttaaagagt 39093198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 245
Target Start/End: Original strand, 7042945 - 7043028
Alignment:
Q  163 taaaataagcaattactcttt-aaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttact 245  Q
    |||||||||||||||  |||| |||||||||||||||||||||||||||   ||||| ||||||| || ||||||||| |||||    
T  7042945 taaaataagcaattatccttttaaaaaagtcaaatatttcgatttccaagacattgaatacatgctttatcataaatatttact 7043028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 250
Target Start/End: Original strand, 40299675 - 40299746
Alignment:
Q  179 tctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactactta 250  Q
    |||||||||| ||||||| ||||||||||||| | |||||||| |  |||||| ||||||||||||||||||    
T  40299675 tctttaaaaaggtcaaatgtttcgatttccaatgcattgattatacacattttaataaatacttactactta 40299746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 271
Target Start/End: Complemental strand, 39691253 - 39691101
Alignment:
Q  122 tgggtcttgttaacgagtgc--tcg-gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattga 218  Q
    ||||| ||||||||||||||  ||| |||||||||||||||||  | | |||  ||||| ||||||||||||||||||| ||| |||| ||| | |||||    
T  39691253 tgggttttgttaacgagtgccctcgagacactctttaagcattccacattaaaaaattattctttaaaaaagtcaaatagttcaattttcaatgcattga 39691154  T
Q  219 ttacatgcattttcataaatacttactacttattgtccttaaagagtacccgg 271  Q
     ||||   ||||||||||| | |||||| |||   |||||||||| |||||||    
T  39691153 atacacaaattttcataaaaaattactatttaagatccttaaagaatacccgg 39691101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 43631584 - 43631468
Alignment:
Q  142 tcggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatact 241  Q
    ||||||||||||||| |||| |||||||| |||||| |  | |||||| ||||||||||  ||||| || | ||||||||||   ||||| ||||||||     
T  43631584 tcggacactctttaaacattctaaaataa-caattatttataaaaaaaatcaaatattttaatttctaatgcattgattacacatatttttataaataca 43631486  T
Q  242 tactacttattgtcctta 259  Q
    |||||||||| |||||||    
T  43631485 tactacttatggtcctta 43631468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 36348629 - 36348522
Alignment:
Q  121 atgggtcttgttaacgagtg-ctc--ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattg 217  Q
    ||||||||||||||||| || |||  || |||| ||||||||   ||||||||||||||| ||||||||||||| ||| |||| ||||| ||| | ||||    
T  36348629 atgggtcttgttaacgaatgtctccggggcactttttaagcacactaaaataagcaattattctttaaaaaagttaaacattttgattttcaatgcattg 36348530  T
Q  218 attacatg 225  Q
    ||||||||    
T  36348529 attacatg 36348522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 42022703 - 42022641
Alignment:
Q  148 actctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaa 210  Q
    ||||||||||||||||||| |||  ||||| | ||||||||||||||||| ||| ||||||||    
T  42022703 actctttaagcattttaaattaaaaaattattttttaaaaaagtcaaatagttcaatttccaa 42022641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 11993804 - 11993873
Alignment:
Q  123 gggtcttgttaacgagtgctc-ggacactctttaagcattttaaaataagcaattactctttaaaaaagt 191  Q
    |||||||||||| |||||| | |||||||||||||||||   |||| ||||||||| |||||||||||||    
T  11993804 gggtcttgttaatgagtgccccggacactctttaagcatacaaaaacaagcaattattctttaaaaaagt 11993873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 34716552 - 34716515
Alignment:
Q  214 attgattacatgcattttcataaatacttactacttat 251  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  34716552 attgattacatgcattttcataaatacttactatttat 34716515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 40298848 - 40298915
Alignment:
Q  122 tgggtcttgttaacgagtg---ctcggacactctttaagcattttaaaataagcaattactctttaaa 186  Q
    |||||||||||||||||||   ||  ||||||||||||||||| ||||||||||||||| || |||||    
T  40298848 tgggtcttgttaacgagtgtccctatgacactctttaagcattataaaataagcaattattcattaaa 40298915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 240
Target Start/End: Complemental strand, 1576464 - 1576380
Alignment:
Q  156 agcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatac 240  Q
    |||||| |||||||| |||||| ||| |||||||   |||||||||||||| ||| | ||||| |||| | ||||||||||||||    
T  1576464 agcattctaaaataaacaattattctgtaaaaaaaataaatatttcgattttcaatgcattgaatacacgtattttcataaatac 1576380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 5217833 - 5217793
Alignment:
Q  183 taaaaaagtcaaatatttcgatttccaaagtattgattaca 223  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  5217833 taaaaaagtcaaatatttcgatttccgatgtattgattaca 5217793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 266
Target Start/End: Complemental strand, 39905794 - 39905673
Alignment:
Q  146 acactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatactt--a 243  Q
    |||||||||||   || ||||||||| ||||  | |||| |||||||||||||||  |||| |||| ||||||||||||  ||||||| ||||| ||  |    
T  39905794 acactctttaaatgttctaaaataagtaattgttttttagaaaagtcaaatattt-aattttcaaaatattgattacataaattttcaaaaatatttaca 39905696  T
Q  244 ctacttattgtccttaaagagta 266  Q
    ||||||||  |||||||||||||    
T  39905695 ctacttatgctccttaaagagta 39905673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 206
Target Start/End: Original strand, 9460428 - 9460512
Alignment:
Q  125 gtcttgttaacgagtgctc---ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgattt 206  Q
    ||||||||||||||||| |   || ||||| ||||||||   |||| ||||||||| |||||| |||||||||| ||||||||||    
T  9460428 gtcttgttaacgagtgccccgagggcactcgttaagcataccaaaacaagcaattattctttagaaaagtcaaacatttcgattt 9460512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 210
Target Start/End: Original strand, 35592406 - 35592497
Alignment:
Q  121 atgggtcttgttaacgagtgctc---ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaa 210  Q
    ||||||| ||||||||||||| |   |||||||||||| | |||| |||||||| ||||| |   ||||||||||||||||||| ||||||||    
T  35592406 atgggtcctgttaacgagtgcacccgggacactctttagg-atttaaaaataagaaattatttcgtaaaaaagtcaaatatttcaatttccaa 35592497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 224
Target Start/End: Complemental strand, 42760282 - 42760181
Alignment:
Q  125 gtcttgttaacgagtgctc--ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattac 222  Q
    ||||||||||||||| | |  ||||||||||||||||||  ||||  || ||||| ||  ||||||| |||||| |||| |||||||| | |||||||||    
T  42760282 gtcttgttaacgagttcccctggacactctttaagcattccaaaaggagaaattattccataaaaaaatcaaatgtttcaatttccaatgcattgattac 42760183  T
Q  223 at 224  Q
    ||    
T  42760182 at 42760181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 67364 - 67424
Alignment:
Q  185 aaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactactta 250  Q
    ||||| |||||||||||||||||||     ||||||||||| ||||| ||||||| ||||||||||    
T  67364 aaaaaatcaaatatttcgatttcca-----ttgattacatgtattttaataaatatttactactta 67424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 21307619 - 21307700
Alignment:
Q  150 tctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcatttt 231  Q
    ||||||| |||| |||||||| |||||  |||| |||||| | |||||||| |||||| |||  |||||||||||| |||||    
T  21307619 tctttaaacattctaaaataaacaatttttcttaaaaaaattaaaatatttagatttcaaaatcattgattacatgtatttt 21307700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 30461322 - 30461359
Alignment:
Q  152 tttaagcattttaaaataagcaattactctttaaaaaa 189  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  30461322 tttaagcattttaaaataagtaattattctttaaaaaa 30461359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 260
Target Start/End: Complemental strand, 2376838 - 2376726
Alignment:
Q  148 actctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactac 247  Q
    ||||||||||||||||||| |||  ||||| ||||||||||  |||||  |||| ||||| || ||||| |||| ||  | ||||||||| | ||||||     
T  2376838 actctttaagcattttaaattaaataattattctttaaaaatatcaaagttttcaatttctaacgtattaattatataaactttcataaaaagttactat 2376739  T
Q  248 ttattgtccttaa 260  Q
    |||  ||||||||    
T  2376738 ttaaggtccttaa 2376726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 206
Target Start/End: Complemental strand, 7044467 - 7044383
Alignment:
Q  123 gggtcttgttaacgagtgctc-ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgattt 206  Q
    |||| |||||||||||||| | || ||||||||||| ||| ||||| ||| ||||| | | | ||||||||||| ||||||||||    
T  7044467 gggttttgttaacgagtgccctgggcactctttaaggattctaaaagaagaaattaatttattaaaaagtcaaacatttcgattt 7044383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 38956915 - 38956955
Alignment:
Q  183 taaaaaagtcaaatatttcgatttccaaagtattgattaca 223  Q
    |||||||||||||||||||||||||| | | ||||||||||    
T  38956915 taaaaaagtcaaatatttcgatttccgatgcattgattaca 38956955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 146 - 266
Target Start/End: Original strand, 189063 - 189183
Alignment:
Q  146 acactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttact 245  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||| ||   ||| ||||||   ||||||||||||||||| |    
T  189063 acactctttaagcattttaaaataagcaattattctttaaaaaagttaaatatttctatttctaatacattaattacacatattttcataaatacttatt 189162  T
Q  246 acttattgtccttaaagagta 266  Q
    | |||| ||| ||||||||||    
T  189163 atttatggtcattaaagagta 189183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 265
Target Start/End: Original strand, 1360528 - 1360649
Alignment:
Q  144 ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatactta 243  Q
    ||||||||||||||||||  ||||| || ||||| | ||||||||||| |||| ||||||||||||| | ||||||||||  | |||| |||||||| ||    
T  1360528 ggacactctttaagcattccaaaattagtaattattttttaaaaaagttaaatgtttcgatttccaatgcattgattacacacttttttataaatacata 1360627  T
Q  244 ctacttattgtccttaaagagt 265  Q
    |||||||| |||||||||||||    
T  1360628 ctacttatagtccttaaagagt 1360649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 33887965 - 33887846
Alignment:
Q  145 gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttac 244  Q
    |||||||||||||||||  |||||||  ||||| ||||||||||||||||||||||| |||| ||| | |||||||||||  ||||||||||||||||||    
T  33887965 gacactctttaagcattccaaaataaataattattctttaaaaaagtcaaatatttcaattttcaatgcattgattacat-tattttcataaatacttac 33887867  T
Q  245 tacttattgtccttaaagagt 265  Q
    | |||||  || |||||||||    
T  33887866 ttcttatgatctttaaagagt 33887846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 267
Target Start/End: Complemental strand, 3256736 - 3256618
Alignment:
Q  150 tctttaagcattttaaaataagcaattactctttaa-aaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactact 248  Q
    ||||||||||||| |||||||||||||| ||||||| ||||||||||| ||||||||||||| | | ||| ||||   |||||||||||||||||  |||    
T  3256736 tctttaagcatttcaaaataagcaattattctttaaaaaaagtcaaatgtttcgatttccaatgcactgaatacacatattttcataaatacttatcact 3256637  T
Q  249 tattgtccttaaagagtac 267  Q
    ||| |||||||||| ||||    
T  3256636 tatggtccttaaagggtac 3256618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 144 - 265
Target Start/End: Complemental strand, 10032035 - 10031914
Alignment:
Q  144 ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatactta 243  Q
    ||||||||||||||||||  ||||| || ||||| | ||| ||||||| |||| ||||||||||||| | ||||||||||  | ||||||||||||| ||    
T  10032035 ggacactctttaagcattccaaaattagtaattatttttttaaaaagttaaatgtttcgatttccaatgcattgattacacactttttcataaatacata 10031936  T
Q  244 ctacttattgtccttaaagagt 265  Q
    ||| |||| |||||||||||||    
T  10031935 ctatttatagtccttaaagagt 10031914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 164 - 271
Target Start/End: Complemental strand, 37129906 - 37129798
Alignment:
Q  164 aaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataa-atacttactacttattgtccttaaag 262  Q
    |||||||| ||||| ||||||||||||| ||||||||| |||| |||   ||| ||||||| ||||||||||| ||||||||||||||| || |||||||    
T  37129906 aaaataagaaattattctttaaaaaagttaaatatttcaatttacaagacattaattacatacattttcataatatacttactacttatggttcttaaag 37129807  T
Q  263 agtacccgg 271  Q
    ||| |||||    
T  37129806 agtgcccgg 37129798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 163 - 265
Target Start/End: Original strand, 42911071 - 42911173
Alignment:
Q  163 taaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactacttattgtccttaaag 262  Q
    ||||||||||||||| |||||||||||||| || ||||| |||| ||| | |  ||||||||| ||||| |||||||||| |||| ||| ||||||||||    
T  42911071 taaaataagcaattattctttaaaaaagtcgaacatttcaattttcaatgcaccgattacatgtatttttataaatactttctacatatagtccttaaag 42911170  T
Q  263 agt 265  Q
    |||    
T  42911171 agt 42911173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 23187307 - 23187247
Alignment:
Q  147 cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttc 207  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| |||||    
T  23187307 cactctttaagcattttaaaataagcaattactctttaataaaattaaatatttcaatttc 23187247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 42890340 - 42890256
Alignment:
Q  181 tttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactacttattgtccttaaagagt 265  Q
    ||||||||||||||| ||||||||||||||   |||||||||||| ||||| | |||||||| |||||||| ||| |||||||||    
T  42890340 tttaaaaaagtcaaacatttcgatttccaatacattgattacatgtatttttaaaaatacttgctacttatagtcattaaagagt 42890256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 28733889 - 28733784
Alignment:
Q  129 tgttaacgagtg--ctcggacactctttaagcattttaaaataagcaattactctttaa-aaaagtcaaatatttcgatttccaaagtattgattacatg 225  Q
    ||||||||||||  |||| ||||||||||||||||||||||||| |||||| ||||||| |||||| |||||||| || |||||    | ||||||||||    
T  28733889 tgttaacgagtgtcctcgaacactctttaagcattttaaaataaacaattattctttaaaaaaagttaaatattttgaattccatgacaatgattacatg 28733790  T
Q  226 catttt 231  Q
    ||||||    
T  28733789 catttt 28733784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 4877353 - 4877472
Alignment:
Q  1 tattaggaatctttgtatcaatcaattcatcattgatcttgtaattatatttcaatttgtcataatttcttgtttaagttttaggtttgatttgagaatg 100  Q
    ||||||||||  ||||||||||| |||||||||| |  ||||| ||| |||||||||||| |||||||  |||||||   ||| ||||||||||||||||    
T  4877353 tattaggaatacttgtatcaatccattcatcatttaa-ttgtagttagatttcaatttgtaataattttctgtttaaagattatgtttgatttgagaatg 4877451  T
Q  101 tgta-gtcttgtaattaagtg 120  Q
    |  | ||||||||||||||||    
T  4877452 tcaaggtcttgtaattaagtg 4877472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 24450616 - 24450497
Alignment:
Q  145 gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttac 244  Q
    ||||||||||||||||| ||||||||  ||| | | |||  |||||| |||||||||||||||||| | ||||| |||| ||||||||||||||| ||||    
T  24450616 gacactctttaagcattctaaaataat-aataattatttttaaaagtaaaatatttcgatttccaatgcattgaatacacgcattttcataaatatttac 24450518  T
Q  245 tacttattgtccttaaagagt 265  Q
     |   || |||||||||||||    
T  24450517 cataaatggtccttaaagagt 24450497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 44719490 - 44719424
Alignment:
Q  164 aaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattt 230  Q
    ||||| |||||||| | ||||||||||||||| ||||||||||| |||  |||||||||||||||||    
T  44719490 aaaattagcaattattttttaaaaaagtcaaacatttcgatttctaaaacattgattacatgcattt 44719424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 9533625 - 9533516
Alignment:
Q  152 tttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactacttat 251  Q
    ||||||||| | |||| ||||||||| | ||| ||||| | |||||||| ||||| ||| | |||||||||| ||||||| ||||||||||| || ||||    
T  9533625 tttaagcatatcaaaacaagcaattatttttttaaaaaataaaatattttgattttcaatgcattgattacacgcatttttataaatacttattatttat 9533526  T
Q  252 tgtccttaaa 261  Q
     ||| |||||    
T  9533525 agtctttaaa 9533516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 261
Target Start/End: Original strand, 48549915 - 48549991
Alignment:
Q  184 aaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactacttattgtccttaaa 261  Q
    |||||||||||||||||  |||||||| ||||||||||||| |||| | |||||||||||| | |||| |||||||||    
T  48549915 aaaaaagtcaaatattttaatttccaaggtattgattacatacattct-ataaatacttaccatttatggtccttaaa 48549991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 266
Target Start/End: Complemental strand, 28252035 - 28251964
Alignment:
Q  195 atatttcgatttccaaagtattgattacatgcattttcataaatacttactacttattgtccttaaagagta 266  Q
    |||||||||||| ||| | |||||||| || ||||||||||||||||||||| |||| | ||||||| ||||    
T  28252035 atatttcgattttcaatgcattgattatatacattttcataaatacttactaattatggcccttaaaaagta 28251964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 244
Target Start/End: Complemental strand, 41431201 - 41431104
Alignment:
Q  148 actctttaagcattttaaaataagcaattactcttt-aaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttac 244  Q
    ||||||||||||||||||| |||| ||||| | ||| |||||| | ||||||||| ||||| || |||||||||||    ||||||||||| ||||||    
T  41431201 actctttaagcattttaaattaagaaattatttttttaaaaaaattaaatatttcaatttctaatgtattgattactcatattttcataaaaacttac 41431104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 249
Target Start/End: Complemental strand, 9097830 - 9097704
Alignment:
Q  125 gtcttgttaacgagtgc--tcgga-cactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgatta 221  Q
    |||||||||||||||||  ||||  ||||||||||||||  ||| |||| |||||| | || |||||| ||||||||||| |||||||| | | | | ||    
T  9097830 gtcttgttaacgagtgccttcgggtcactctttaagcatactaatataaacaattatt-ttaaaaaaaatcaaatatttcaatttccaatgcaattaata 9097732  T
Q  222 catgcattttcataaatacttactactt 249  Q
    ||  ||||||||||||||||||| ||||    
T  9097731 cacacattttcataaatacttaccactt 9097704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 39316073 - 39316129
Alignment:
Q  150 tctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgattt 206  Q
    |||||||||||| ||||||||| ||||| ||||||   |||||||||||||||||||    
T  39316073 tctttaagcattctaaaataagtaattattctttattgaagtcaaatatttcgattt 39316129  T

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Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 224
Target Start/End: Complemental strand, 7596283 - 7596180
Alignment:
Q  124 ggtcttgttaacgagtg-ctc-ggacactctttaagcattttaaaataagcaatta-ctctttaaaaaagtcaaatatttcgatttccaaagtattgatt 220  Q
    ||||||||||| ||||| ||| || ||||||||||||||||||||| ||| |||||  || | |||| ||||||| ||||| |||||||| | |||||||    
T  7596283 ggtcttgttaatgagtgtctccgggcactctttaagcattttaaaagaagaaattatttcataaaaagagtcaaaaatttcaatttccaatgcattgatt 7596184  T
Q  221 acat 224  Q
    ||||    
T  7596183 acat 7596180  T

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Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 263
Target Start/End: Original strand, 35874645 - 35874748
Alignment:
Q  160 ttttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactacttattgtcctta 259  Q
    ||||||||||| |||||| | |||||| |||| ||||||||| ||||| ||  |||| | |||||  |||||| ||||||||||||| || | || ||||    
T  35874645 ttttaaaataaacaattaatttttaaataagttaaatatttcaatttctaatatattaaatacatatattttcgtaaatacttactatttgtggttctta 35874744  T
Q  260 aaga 263  Q
    ||||    
T  35874745 aaga 35874748  T

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Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 247
Target Start/End: Original strand, 15995902 - 15995984
Alignment:
Q  166 aataagcaattactctttaaaaaa-gtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactac 247  Q
    ||||||||| || ||||||||||| || |||||||||||||| ||| | ||||||||||   |||||||||| ||||| ||||    
T  15995902 aataagcaactattctttaaaaaaagttaaatatttcgattttcaatgcattgattacacatattttcataattacttgctac 15995984  T

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Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 260
Target Start/End: Complemental strand, 34299881 - 34299741
Alignment:
Q  123 gggtcttgttaacgagtgctc---ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgat 219  Q
    ||||||||||||||||||| |   || |||| |||||||||  || | |||||||||| |||||||||| ||||||  |||| |||| ||||| | ||||    
T  34299881 gggtcttgttaacgagtgcccccggggcactttttaagcatgctagattaagcaattattctttaaaaatgtcaaagttttcaatttacaaagcactgat 34299782  T
Q  220 tacatgcattttcataaatacttactacttattgtccttaa 260  Q
    ||||   | ||||||||| | |||||| |||  ||||||||    
T  34299781 tacacaaactttcataaaaagttactatttaaggtccttaa 34299741  T

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Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 40065886 - 40065790
Alignment:
Q  158 cattttaaaataagcaattact---ctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttactacttat 251  Q
    ||||||||||||||||| || |   |||||||||||| |||||||| ||||| |||   || || |||||| ||||| |||||||||||| ||||||    
T  40065886 cattttaaaataagcaagtagtattctttaaaaaagttaaatattttgattttcaatacatcgaatacatgtatttttataaatacttaccacttat 40065790  T

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Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 5248087 - 5248148
Alignment:
Q  144 ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatt 205  Q
    ||||| |||||||| |||| |||| ||| ||||| | | |||||||||||||||||||||||    
T  5248087 ggacattctttaaggatttcaaaagaagaaattattttataaaaaagtcaaatatttcgatt 5248148  T

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Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 166
Target Start/End: Complemental strand, 26872918 - 26872877
Alignment:
Q  125 gtcttgttaacgagtgctcggacactctttaagcattttaaa 166  Q
    ||||||||||||||||||| |||||| |||||||||| ||||    
T  26872918 gtcttgttaacgagtgctccgacactttttaagcattctaaa 26872877  T

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Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 18926295 - 18926398
Alignment:
Q  122 tgggtcttgttaacgagtg--ctcggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgat 219  Q
    ||||| |||||||||||||  || || ||||||||||||||||||||  | | ||||| |||||||||| || ||||| ||| |||| ||| | |||||     
T  18926295 tgggttttgttaacgagtgtcctagggcactctttaagcattttaaatcatgaaattattctttaaaaaggtgaaatagttcaattttcaatgcattgaa 18926394  T
Q  220 taca 223  Q
    ||||    
T  18926395 taca 18926398  T

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Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 206
Target Start/End: Complemental strand, 31902884 - 31902801
Alignment:
Q  125 gtcttgttaacgagtgctc--ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgattt 206  Q
    ||||||||||||||||  |  || |||| |||||||| || |||||||| ||||| || |||| ||||||||||||||| ||||    
T  31902884 gtcttgttaacgagtgtcccggggcactttttaagcaattcaaaataagaaattattccttaagaaagtcaaatatttcaattt 31902801  T

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Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 210
Target Start/End: Original strand, 35567088 - 35567172
Alignment:
Q  127 cttgttaacgagtgctc-ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaa 210  Q
    ||||||||||| ||||| || |||||||| ||||||| ||| ||   ||||| | ||||||||||||||||||||  ||||||||    
T  35567088 cttgttaacgaatgctccgggcactcttttagcatttcaaattagaaaattattttttaaaaaagtcaaatattttaatttccaa 35567172  T

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Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 46418404 - 46418360
Alignment:
Q  144 ggacactctttaagcattttaaaataagcaattactctttaaaaa 188  Q
    ||||||||||||| ||||||||| ||| |||||| ||||||||||    
T  46418404 ggacactctttaaacattttaaattaaacaattattctttaaaaa 46418360  T

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Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 223
Target Start/End: Original strand, 47507578 - 47507681
Alignment:
Q  123 gggtcttgttaacgagtg-ctc--ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgat 219  Q
    |||||||||||||||||| |||  || ||||||||||| ||| ||||| ||| ||| | | | ||||||| ||||| ||||| |||||| | ||||||||    
T  47507578 gggtcttgttaacgagtgtctccggggcactctttaaggattctaaaagaagaaataattttataaaaaaatcaaagatttcaatttccgatgtattgat 47507677  T
Q  220 taca 223  Q
    ||||    
T  47507678 taca 47507681  T

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Target: scaffold0291 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 268
Target Start/End: Complemental strand, 11776 - 11654
Alignment:
Q  146 acactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgattacatgcattttcataaatacttact 245  Q
    ||||||||||||||||| |||||||||||||| | |||| ||||||||||| |||||||||| || |  |||||||||    |||||||||||| |||||    
T  11776 acactctttaagcatttcaaaataagcaattaatttttagaaaagtcaaatgtttcgatttcaaatgctttgattacacattttttcataaatagttact 11677  T
Q  246 acttattgtccttaaagagtacc 268  Q
    ||||||  ||||| |||||||||    
T  11676 acttataatccttcaagagtacc 11654  T

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Target: scaffold1681 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1681
Description:

Target: scaffold1681; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 646 - 725
Alignment:
Q  123 gggtcttgttaacgagtgctcg--gacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatattt 200  Q
    |||| ||||||||||||||||   ||||||||||||||||| ||||||||| ||||| | |||||||| || ||||||||    
T  646 gggttttgttaacgagtgctcccagacactctttaagcattctaaaataagtaattagtgtttaaaaaggttaaatattt 725  T

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Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 219182 - 219248
Alignment:
Q  144 ggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaa 210  Q
    ||||| ||||||||||||||||| || | ||||| |||||| |||||||||||| ||| ||||||||    
T  219182 ggacattctttaagcattttaaattaggaaattattctttacaaaagtcaaatagttcaatttccaa 219248  T

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Target: scaffold0192 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 16030 - 15933
Alignment:
Q  126 tcttgttaacgagtg---ctcggacactctttaagcattttaaaataagcaattactctttaaaaaagtcaaatatttcgatttccaaagtattgatt 220  Q
    |||||||||||||||   || | ||||||||||| ||||||||||| |  ||||| |||| ||||| || |||||||||||||| ||||  |||||||    
T  16030 tcttgttaacgagtgtttctagtacactctttaaacattttaaaattaataattattcttgaaaaatgttaaatatttcgattttcaaaacattgatt 15933  T

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