View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21567_high_1 (Length: 530)

Name: NF21567_high_1
Description: NF21567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21567_high_1
NF21567_high_1
[»] chr3 (55 HSPs)
chr3 (249-513)||(26989270-26989544)
chr3 (121-198)||(11047268-11047345)
chr3 (119-198)||(52856976-52857055)
chr3 (121-198)||(49220114-49220191)
chr3 (128-198)||(28253737-28253807)
chr3 (122-198)||(31070949-31071025)
chr3 (16-66)||(26989053-26989103)
chr3 (121-195)||(49220372-49220446)
chr3 (1-66)||(44069811-44069876)
chr3 (1-66)||(5166481-5166544)
chr3 (148-198)||(11046927-11046977)
chr3 (1-66)||(8051267-8051332)
chr3 (1-66)||(8075085-8075150)
chr3 (1-62)||(11612352-11612413)
chr3 (121-198)||(26988805-26988882)
chr3 (1-66)||(54990755-54990820)
chr3 (7-66)||(10499067-10499126)
chr3 (121-196)||(18734158-18734233)
chr3 (1-63)||(4844472-4844534)
chr3 (1-63)||(4870168-4870230)
chr3 (8-66)||(51903836-51903894)
chr3 (1-66)||(10445097-10445162)
chr3 (1-46)||(14186700-14186745)
chr3 (1-66)||(14339663-14339728)
chr3 (9-62)||(27923005-27923058)
chr3 (1-66)||(30232383-30232448)
chr3 (121-198)||(31071204-31071281)
chr3 (7-51)||(40940876-40940920)
chr3 (3-66)||(8170727-8170790)
chr3 (1-60)||(19716250-19716309)
chr3 (3-50)||(34844425-34844472)
chr3 (1-64)||(44743815-44743878)
chr3 (7-66)||(52769941-52770000)
chr3 (121-175)||(11046991-11047045)
chr3 (8-66)||(42358017-42358075)
chr3 (1-66)||(2667915-2667980)
chr3 (1-62)||(17035039-17035100)
chr3 (1-66)||(20501749-20501813)
chr3 (122-195)||(28253446-28253519)
chr3 (1-66)||(47454575-47454640)
chr3 (1-66)||(49397499-49397564)
chr3 (6-51)||(53288814-53288859)
chr3 (9-65)||(478807-478863)
chr3 (7-51)||(2511399-2511443)
chr3 (14-66)||(7973622-7973674)
chr3 (7-51)||(8456252-8456296)
chr3 (10-66)||(12761574-12761630)
chr3 (7-51)||(18176989-18177033)
chr3 (7-51)||(26108343-26108387)
chr3 (7-51)||(30807255-30807299)
chr3 (10-66)||(33278978-33279034)
chr3 (7-51)||(35492962-35493006)
chr3 (10-66)||(36015510-36015566)
chr3 (6-66)||(40268546-40268606)
chr3 (4-60)||(47236935-47236991)
[»] chr4 (48 HSPs)
chr4 (116-199)||(36215648-36215731)
chr4 (122-196)||(8607778-8607852)
chr4 (121-198)||(17254736-17254813)
chr4 (121-198)||(24039539-24039616)
chr4 (121-196)||(1113212-1113287)
chr4 (121-199)||(24039249-24039327)
chr4 (1-66)||(7949412-7949477)
chr4 (121-198)||(55620193-55620270)
chr4 (121-198)||(55627497-55627574)
chr4 (121-199)||(1113467-1113545)
chr4 (119-183)||(29430193-29430257)
chr4 (2-62)||(51250484-51250544)
chr4 (119-198)||(48018610-48018689)
chr4 (1-63)||(2732047-2732109)
chr4 (1-66)||(8030162-8030227)
chr4 (1-66)||(9693456-9693521)
chr4 (1-66)||(37274417-37274482)
chr4 (121-198)||(43099329-43099401)
chr4 (1-62)||(46295150-46295211)
chr4 (7-66)||(28635755-28635814)
chr4 (7-66)||(49262642-49262701)
chr4 (16-66)||(12793869-12793919)
chr4 (8-66)||(18525420-18525478)
chr4 (119-195)||(29429942-29430016)
chr4 (1-66)||(38838850-38838915)
chr4 (1-66)||(49576852-49576917)
chr4 (1-62)||(51622538-51622599)
chr4 (1-66)||(51954167-51954232)
chr4 (1-65)||(32992665-32992729)
chr4 (1-37)||(38869821-38869857)
chr4 (3-66)||(34075563-34075625)
chr4 (132-195)||(55561022-55561085)
chr4 (16-62)||(3611655-3611701)
chr4 (7-65)||(47386750-47386808)
chr4 (7-53)||(51535664-51535710)
chr4 (1-66)||(4483259-4483324)
chr4 (3-56)||(12848485-12848538)
chr4 (1-66)||(17618334-17618399)
chr4 (1-66)||(23378009-23378074)
chr4 (6-51)||(25852264-25852309)
chr4 (5-66)||(26356874-26356935)
chr4 (17-66)||(29312222-29312271)
chr4 (1-66)||(30938177-30938242)
chr4 (1-66)||(37720172-37720237)
chr4 (7-51)||(2351064-2351108)
chr4 (7-51)||(27528897-27528941)
chr4 (1-37)||(37109338-37109374)
chr4 (7-59)||(55427165-55427217)
[»] chr2 (44 HSPs)
chr2 (121-198)||(12701927-12702004)
chr2 (121-199)||(12261114-12261192)
chr2 (121-198)||(12702216-12702293)
chr2 (119-198)||(21304328-21304407)
chr2 (1-62)||(12086091-12086152)
chr2 (1-66)||(30808605-30808670)
chr2 (4-66)||(37971951-37972013)
chr2 (1-66)||(37480128-37480193)
chr2 (3-66)||(42602609-42602672)
chr2 (1-66)||(38854420-38854485)
chr2 (1-62)||(42327357-42327418)
chr2 (7-66)||(21213828-21213887)
chr2 (7-66)||(25637210-25637269)
chr2 (7-66)||(33582032-33582091)
chr2 (1-66)||(1435117-1435181)
chr2 (129-198)||(2217622-2217691)
chr2 (1-62)||(21195638-21195699)
chr2 (1-62)||(26276408-26276469)
chr2 (1-66)||(29503324-29503388)
chr2 (1-62)||(33569820-33569881)
chr2 (1-66)||(41908596-41908661)
chr2 (122-198)||(2217898-2217973)
chr2 (9-65)||(31573600-31573656)
chr2 (3-37)||(8192467-8192501)
chr2 (3-41)||(42420324-42420362)
chr2 (122-195)||(3568554-3568627)
chr2 (1-66)||(7798994-7799058)
chr2 (9-66)||(8280902-8280958)
chr2 (1-66)||(11251140-11251205)
chr2 (1-66)||(12517712-12517776)
chr2 (1-66)||(23052481-23052546)
chr2 (1-66)||(34041546-34041611)
chr2 (6-51)||(36390670-36390715)
chr2 (7-51)||(10582092-10582136)
chr2 (4-64)||(14780562-14780622)
chr2 (3-47)||(16525232-16525276)
chr2 (7-51)||(17324817-17324861)
chr2 (5-61)||(19244166-19244222)
chr2 (7-51)||(25293217-25293261)
chr2 (7-51)||(27290639-27290683)
chr2 (26-62)||(32826736-32826772)
chr2 (7-59)||(39764992-39765044)
chr2 (7-51)||(43374427-43374471)
chr2 (7-51)||(44976256-44976300)
[»] chr1 (64 HSPs)
chr1 (119-198)||(10394130-10394209)
chr1 (121-198)||(39277872-39277949)
chr1 (121-199)||(28990298-28990376)
chr1 (121-198)||(19920505-19920582)
chr1 (121-198)||(47422151-47422228)
chr1 (121-198)||(28990588-28990665)
chr1 (121-199)||(36077144-36077222)
chr1 (121-195)||(39277585-39277659)
chr1 (121-194)||(27334349-27334422)
chr1 (121-198)||(47421891-47421968)
chr1 (122-198)||(49186000-49186076)
chr1 (116-198)||(45822787-45822869)
chr1 (121-199)||(45823077-45823155)
chr1 (1-59)||(51814547-51814605)
chr1 (1-66)||(6122847-6122912)
chr1 (1-66)||(12587323-12587387)
chr1 (121-197)||(10394420-10394496)
chr1 (126-197)||(30050210-30050281)
chr1 (1-66)||(6650648-6650713)
chr1 (121-198)||(36076885-36076962)
chr1 (121-198)||(52285342-52285419)
chr1 (123-195)||(30049918-30049990)
chr1 (7-66)||(1094584-1094643)
chr1 (132-175)||(7714195-7714238)
chr1 (121-172)||(15158349-15158400)
chr1 (10-65)||(18037572-18037627)
chr1 (3-50)||(48400226-48400273)
chr1 (9-66)||(7219876-7219933)
chr1 (1-66)||(16893447-16893512)
chr1 (132-197)||(16959139-16959204)
chr1 (1-66)||(19940830-19940895)
chr1 (1-66)||(29753702-29753767)
chr1 (1-66)||(30203185-30203250)
chr1 (1-66)||(31605806-31605871)
chr1 (1-66)||(31794222-31794287)
chr1 (1-66)||(45266887-45266952)
chr1 (14-62)||(42983336-42983384)
chr1 (121-173)||(52285079-52285131)
chr1 (3-66)||(6127945-6128008)
chr1 (121-160)||(10719614-10719653)
chr1 (12-62)||(3799970-3800020)
chr1 (1-67)||(10526876-10526942)
chr1 (121-175)||(16958865-16958919)
chr1 (1-62)||(17297037-17297099)
chr1 (6-51)||(168251-168296)
chr1 (1-66)||(2799915-2799980)
chr1 (1-62)||(15065018-15065079)
chr1 (1-66)||(21547438-21547503)
chr1 (9-66)||(23471043-23471100)
chr1 (1-66)||(24019076-24019141)
chr1 (1-66)||(34460867-34460932)
chr1 (1-66)||(36428765-36428830)
chr1 (1-62)||(41508884-41508945)
chr1 (1-62)||(44961818-44961879)
chr1 (6-51)||(46607860-46607905)
chr1 (1-66)||(48619167-48619232)
chr1 (1-66)||(51281404-51281469)
chr1 (7-51)||(4621339-4621383)
chr1 (1-65)||(17745216-17745279)
chr1 (7-51)||(24122074-24122118)
chr1 (7-51)||(24674444-24674488)
chr1 (1-37)||(33700760-33700796)
chr1 (3-59)||(34228928-34228984)
chr1 (7-51)||(45859145-45859189)
[»] chr8 (43 HSPs)
chr8 (121-198)||(13557429-13557506)
chr8 (121-199)||(13557139-13557217)
chr8 (119-198)||(31933559-31933638)
chr8 (1-62)||(968415-968476)
chr8 (121-194)||(12654991-12655064)
chr8 (129-198)||(18847367-18847435)
chr8 (1-66)||(29858007-29858072)
chr8 (7-66)||(8485058-8485117)
chr8 (119-198)||(31933273-31933352)
chr8 (119-198)||(36194627-36194706)
chr8 (1-63)||(6536573-6536635)
chr8 (1-66)||(11819829-11819894)
chr8 (1-62)||(27750783-27750844)
chr8 (1-66)||(28783113-28783178)
chr8 (121-198)||(36194917-36194994)
chr8 (1-66)||(44780072-44780137)
chr8 (116-196)||(12654703-12654783)
chr8 (4-66)||(3624636-3624697)
chr8 (132-198)||(18847635-18847701)
chr8 (1-66)||(36205248-36205311)
chr8 (1-66)||(2203545-2203610)
chr8 (1-66)||(13129721-13129786)
chr8 (1-66)||(18540351-18540416)
chr8 (1-62)||(33727835-33727896)
chr8 (1-62)||(43292398-43292459)
chr8 (1-56)||(23361617-23361672)
chr8 (1-56)||(35287769-35287824)
chr8 (1-66)||(3305146-3305211)
chr8 (6-51)||(3734725-3734770)
chr8 (6-51)||(6953109-6953154)
chr8 (1-66)||(11793479-11793544)
chr8 (5-66)||(16843753-16843813)
chr8 (1-66)||(16852393-16852458)
chr8 (1-66)||(18546320-18546385)
chr8 (13-66)||(35672483-35672536)
chr8 (5-65)||(3058009-3058068)
chr8 (7-51)||(4718700-4718744)
chr8 (7-51)||(14633009-14633053)
chr8 (7-51)||(15259508-15259552)
chr8 (7-51)||(32879334-32879378)
chr8 (1-37)||(33017267-33017303)
chr8 (7-51)||(34237757-34237801)
chr8 (7-51)||(39349311-39349355)
[»] chr7 (53 HSPs)
chr7 (121-198)||(6000479-6000556)
chr7 (121-199)||(43392297-43392375)
chr7 (121-198)||(4133127-4133204)
chr7 (1-66)||(21558181-21558246)
chr7 (1-66)||(30579388-30579453)
chr7 (1-66)||(41487412-41487477)
chr7 (119-198)||(25731918-25731997)
chr7 (1-62)||(279916-279977)
chr7 (1-66)||(2446361-2446426)
chr7 (4-65)||(4572256-4572317)
chr7 (1-60)||(38374563-38374622)
chr7 (5-66)||(5075935-5075995)
chr7 (1-66)||(15137606-15137671)
chr7 (1-66)||(17040970-17041035)
chr7 (1-66)||(27313692-27313757)
chr7 (126-175)||(37691718-37691767)
chr7 (1-66)||(41519223-41519287)
chr7 (1-66)||(43590960-43591025)
chr7 (1-66)||(43663053-43663118)
chr7 (128-196)||(16833457-16833525)
chr7 (15-55)||(37117123-37117163)
chr7 (2-62)||(48983695-48983755)
chr7 (1-64)||(3280446-3280508)
chr7 (7-62)||(5934180-5934235)
chr7 (121-196)||(6000737-6000812)
chr7 (3-46)||(23330846-23330889)
chr7 (3-46)||(28647020-28647063)
chr7 (3-62)||(33181172-33181231)
chr7 (3-62)||(41519072-41519131)
chr7 (1-63)||(7721422-7721484)
chr7 (121-199)||(18417506-18417584)
chr7 (13-63)||(22035463-22035513)
chr7 (4-66)||(33460380-33460442)
chr7 (6-51)||(654806-654851)
chr7 (6-51)||(2751325-2751370)
chr7 (1-66)||(2883003-2883067)
chr7 (1-62)||(5273552-5273613)
chr7 (1-66)||(5668529-5668594)
chr7 (1-66)||(7309409-7309473)
chr7 (1-66)||(9183149-9183214)
chr7 (1-66)||(11720918-11720983)
chr7 (1-62)||(19553506-19553567)
chr7 (1-66)||(29385701-29385766)
chr7 (1-62)||(45709670-45709731)
chr7 (129-197)||(4132836-4132904)
chr7 (7-51)||(7175964-7176008)
chr7 (7-51)||(7275332-7275376)
chr7 (7-51)||(22119943-22119987)
chr7 (1-37)||(26459397-26459433)
chr7 (7-51)||(29861725-29861769)
chr7 (122-197)||(32389733-32389809)
chr7 (7-51)||(40543012-40543056)
chr7 (14-66)||(45228983-45229035)
[»] scaffold0032 (1 HSPs)
scaffold0032 (7-62)||(112341-112396)
[»] scaffold0258 (1 HSPs)
scaffold0258 (1-67)||(15280-15346)
[»] chr6 (24 HSPs)
chr6 (121-195)||(1211397-1211471)
chr6 (119-184)||(1211683-1211748)
chr6 (1-62)||(6385915-6385976)
chr6 (1-66)||(8597705-8597770)
chr6 (1-66)||(20213094-20213159)
chr6 (1-66)||(22107117-22107182)
chr6 (7-66)||(18263899-18263958)
chr6 (1-66)||(1056643-1056708)
chr6 (1-62)||(14199909-14199970)
chr6 (1-62)||(24333987-24334048)
chr6 (1-66)||(31622949-31623014)
chr6 (1-62)||(33549157-33549218)
chr6 (7-66)||(30127459-30127518)
chr6 (3-37)||(6691538-6691572)
chr6 (8-66)||(14558022-14558079)
chr6 (8-62)||(32250812-32250866)
chr6 (1-66)||(10338132-10338197)
chr6 (6-51)||(15360200-15360245)
chr6 (1-66)||(23242039-23242104)
chr6 (7-51)||(654248-654292)
chr6 (7-51)||(3222737-3222781)
chr6 (2-66)||(6758380-6758444)
chr6 (7-51)||(12390476-12390520)
chr6 (1-61)||(28841467-28841527)
[»] chr5 (29 HSPs)
chr5 (1-66)||(16773860-16773925)
chr5 (9-66)||(21589349-21589406)
chr5 (121-196)||(8417561-8417636)
chr5 (7-66)||(30109267-30109325)
chr5 (129-195)||(9989959-9990024)
chr5 (1-63)||(17028225-17028287)
chr5 (1-66)||(12877746-12877811)
chr5 (121-198)||(18968509-18968586)
chr5 (4-65)||(35705042-35705103)
chr5 (1-59)||(3315268-3315326)
chr5 (129-195)||(18968800-18968866)
chr5 (1-66)||(84877-84942)
chr5 (1-66)||(29075834-29075899)
chr5 (1-66)||(29692344-29692409)
chr5 (10-66)||(10054109-10054165)
chr5 (7-51)||(18207258-18207302)
chr5 (13-62)||(4793042-4793091)
chr5 (1-66)||(6844782-6844847)
chr5 (1-66)||(8278233-8278298)
chr5 (9-66)||(22737143-22737200)
chr5 (1-62)||(29173543-29173604)
chr5 (1-62)||(31074285-31074346)
chr5 (1-62)||(35360048-35360109)
chr5 (1-66)||(43442249-43442314)
chr5 (1-37)||(14285214-14285250)
chr5 (7-51)||(27498833-27498877)
chr5 (7-51)||(34310193-34310237)
chr5 (7-51)||(37495098-37495142)
chr5 (7-51)||(38684259-38684303)
[»] scaffold0009 (2 HSPs)
scaffold0009 (119-175)||(233556-233612)
scaffold0009 (119-179)||(233720-233780)
[»] scaffold0300 (1 HSPs)
scaffold0300 (14-66)||(4406-4458)
[»] scaffold0006 (2 HSPs)
scaffold0006 (6-66)||(162967-163027)
scaffold0006 (1-66)||(18352-18416)
[»] scaffold0576 (1 HSPs)
scaffold0576 (6-51)||(5184-5229)
[»] scaffold0217 (1 HSPs)
scaffold0217 (10-51)||(7411-7452)
[»] scaffold0172 (1 HSPs)
scaffold0172 (1-62)||(15739-15800)
[»] scaffold0130 (1 HSPs)
scaffold0130 (150-199)||(25312-25361)
[»] scaffold0026 (1 HSPs)
scaffold0026 (6-51)||(97468-97513)
[»] scaffold0238 (1 HSPs)
scaffold0238 (1-37)||(2698-2734)
[»] scaffold0070 (1 HSPs)
scaffold0070 (7-51)||(40376-40420)
[»] scaffold0019 (1 HSPs)
scaffold0019 (7-51)||(161860-161904)


Alignment Details
Target: chr3 (Bit Score: 212; Significance: 1e-116; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 249 - 513
Target Start/End: Original strand, 26989270 - 26989544
Alignment:
Q  249 aagtaaagttacccctgatctcactttcatagcaaaatctc----------ttctttctcagtttcgtagctcacttccatagcaaaatctcccactcta 338  Q
    ||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||     
T  26989270 aagtaaagttacccctgatctcattttcatagcaaaatctcttctcttctcttctttctcagtttcgtagctcacttccatagcaaaatctcccactctc 26989369  T
Q  339 tctgattcatttcagaaaccaaaacgtttaacaaaaatgttgcggcacattacaaaaaccgcagcaaaaaaccactattcttaccttagaaatctcatac 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||| ||    
T  26989370 tctgattcatttcagaaaccaaaacgtttaacaaaaatgttgcggcacattacaaaaaccgcagcaaaaaaccactattctttcattagaaatatcacac 26989469  T
Q  439 caacgatctcatctctaaattattcttctaaatctccatcaaagcccactaaacccacaaaacccacttccaaaa 513  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26989470 caacgatctcatctctaaactattcttctaaatctccatcaaagcccactaaacccacaaaacccacttccaaaa 26989544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 11047268 - 11047345
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||||||||||||||||||||||  ||||||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  11047268 ctaaacggaccttttattacttatgggaccaaaccgatacttgaaatcaagttaagggaccaattgaacatttaagcc 11047345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 119 - 198
Target Start/End: Complemental strand, 52857055 - 52856976
Alignment:
Q  119 atctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||| ||||||| ||||||||||||| ||||||||    
T  52857055 atctaaacggaccttttattacttatgggaccaaaccgatacttgaaattaagttaagggaccaattgagcgtttaagcc 52856976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 49220191 - 49220114
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||||||| |||||||| |||||  || ||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  49220191 ctaaacggactttttattatttatgggactaaaccgatacttaaaatcaagttaagggaccaattaagcatttaagcc 49220114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 28253737 - 28253807
Alignment:
Q  128 gaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||||||||| |||||  ||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  28253737 gaccttttattatttatgggaccaatccgatacttgaaatcaagttaagggaccaattgagcatttaagcc 28253807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 198
Target Start/End: Complemental strand, 31071025 - 31070949
Alignment:
Q  122 taaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||||| |||||||||||||||  ||||||| |||||||||||||||||||| |||||||  || ||||||||||    
T  31071025 taaacggatcttttattacttatgggaccaaactgatacttaaaatcaagttaagggaccaaaagaacatttaagcc 31070949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 26989053 - 26989103
Alignment:
Q  16 gttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  26989053 gttcgattccctccggtgccagcttaggtggactaatttagctttttcaaa 26989103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 49220372 - 49220446
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaa 195  Q
    |||||| ||| |||||||| |||||  ||||||||||||||| |||| ||||||| |||||||||||||||||||    
T  49220372 ctaaacagactttttattatttatgggaccaaaccgatacttgaaattaagttaagggaccaattgagcatttaa 49220446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 44069811 - 44069876
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||| |||||  ||||||||||| |||||||| ||| |||||||||||||||    
T  44069811 tcctcaaggtctcaggtttgattctttccggtgccaatttaggtgggctagtttagcttcttcaaa 44069876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 5166481 - 5166544
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||| |||||||||||||||  ||||||||||| |||||| | |||||||||||||||||||    
T  5166481 tcctcaagatctcaggttcgattc--tccggtgccaagttaggttggctaatttagcttcttcaaa 5166544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 11046977 - 11046927
Alignment:
Q  148 accaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    ||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  11046977 accaaaccgatacatgaaatcaagttaagggaccaattgagcatttaagcc 11046927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8051267 - 8051332
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| |||||||| |||||||||||||||||||||| |||| ||| ||  |||||||||||||||    
T  8051267 tcctcgaggtctcaagttcgattccctccggtgccaatttagttgggctcgtttagcttcttcaaa 8051332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 8075150 - 8075085
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||| |||||||||||||||||  ||| ||| || ||||| |||||||||||||||||||    
T  8075150 tcctcaaggtttcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttcaaa 8075085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11612352 - 11612413
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    |||| ||||||||||||||||| | | |||||||||| |||||| |||||||||||||||||    
T  11612352 tccttaaggtctcaggttcgatgctccccggtgccaatttaggtcgactaatttagcttctt 11612413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 26988882 - 26988805
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    ||||| |||| ||||||||||||||  || |||| ||||||| |||| ||||||| ||||||||| ||||||||||||    
T  26988882 ctaaaaggacattttattacttatgggacaaaactgatacttgaaataaagttaagggaccaattaagcatttaagcc 26988805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 54990755 - 54990820
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||||||||| |  || || ||| |||||||| |||||||||||||||||||    
T  54990755 tcctcaaggtctcaggttcgattctcctcgatggcaatttaggtgggctaatttagcttcttcaaa 54990820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 10499126 - 10499067
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||| ||||| || ||| || ||||| |||||||||||||||||||    
T  10499126 aggtctcaggttcgattctctccgatgtcaatttgggtgggctaatttagcttcttcaaa 10499067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 18734158 - 18734233
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaag 196  Q
    |||||| ||| |||||||||||| |  ||||| |||||||||||||| ||||||||||| |||  |||||||||||    
T  18734158 ctaaacagactttttattacttaagggaccaagccgatacttaaaataaagttaatggatcaaaagagcatttaag 18734233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 4844534 - 4844472
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttc 63  Q
    ||||| |||||||||| ||||||| |||||||||||| ||  |||| ||||||||||||||||    
T  4844534 tcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaatttagcttcttc 4844472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 4870230 - 4870168
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttc 63  Q
    ||||| |||||||||| ||||||| |||||||||||| ||  |||| ||||||||||||||||    
T  4870230 tcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaatttagcttcttc 4870168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 51903894 - 51903836
Alignment:
Q  8 ggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||||||||| |||||||| ||| ||  |||| |||||||||||||||||||    
T  51903894 ggtctcaggttcgattctctccggtgtcaatttgagtgggctaatttagcttcttcaaa 51903836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10445162 - 10445097
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| |||||||||||||||||| ||| ||||| || ||  |||| |||||||||||||||||||    
T  10445162 tcctcgaggtctcaggttcgattctctctggtgctaatttgagtgggctaatttagcttcttcaaa 10445097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14186700 - 14186745
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtgg 46  Q
    |||||||||||||||||||||||| |||||||| ||| ||||||||    
T  14186700 tcctcaaggtctcaggttcgattctctccggtgtcaatttaggtgg 14186745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 14339663 - 14339728
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||| |||||||||||||||| | |  ||||||| | |||||| |||||||||||||||||||    
T  14339663 tcctcaatgtctcaggttcgattctccctagtgccaattaaggtgggctaatttagcttcttcaaa 14339728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 27923058 - 27923005
Alignment:
Q  9 gtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    |||||||||||||||||| || ||| ||| || |||||||||||||||||||||    
T  27923058 gtctcaggttcgattcccacctgtgtcaatttgggtggactaatttagcttctt 27923005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30232383 - 30232448
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||| |||||||||||| |||| |||||||||||| || | ||| ||||||||||| |||||||    
T  30232383 tcctcatggtctcaggttccattctctccggtgccaatttggttgggctaatttagctacttcaaa 30232448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 31071204 - 31071281
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||| |||||||||||| |||||  | ||||||||||||| |||||||||||| |||  ||  |||||||||||||    
T  31071204 ctaaacagaccttttattatttatgggatcaaaccgatacttgaaatcaagttaagggaagaaaagagcatttaagcc 31071281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 40940876 - 40940920
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||||||||    
T  40940876 aggtctcaggttcgattccctctggtgccaatttcggtggactaa 40940920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 8170727 - 8170790
Alignment:
Q  3 ctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||||||||||||| |||| |||| ||| || ||||| ||||||||  |||||||||    
T  8170727 ctcaaggtctcaggttcgatttcctctggtgtcaatttgggtgggctaatttaaattcttcaaa 8170790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 19716250 - 19716309
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttc 60  Q
    ||||||||||||| |||||||||| | |||||| ||| || ||||| |||||||||||||    
T  19716250 tcctcaaggtctctggttcgattctccccggtgacaatttgggtgggctaatttagcttc 19716309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 34844425 - 34844472
Alignment:
Q  3 ctcaaggtctcaggttcgattccctccggtgccaacttaggtggacta 50  Q
    ||||||||||||||||||||||||||| | ||||| || |||||||||    
T  34844425 ctcaaggtctcaggttcgattccctccagagccaatttcggtggacta 34844472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 44743878 - 44743815
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttca 64  Q
    ||||| |||||||||||||||||  |||| ||||||| || |||||  ||||||||||||||||    
T  44743878 tcctcgaggtctcaggttcgattatctccagtgccaatttgggtgggttaatttagcttcttca 44743815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 52770000 - 52769941
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||| ||   ||| ||| |||||||| |||||||||||||||||||    
T  52770000 aggtctcaggttcgattctctttagtgtcaatttaggtgggctaatttagcttcttcaaa 52769941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 11047045 - 11046991
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaa 175  Q
    ||||| |||||||||||| ||||||  ||||||||||||| | ||||||||||||    
T  11047045 ctaaagggaccttttatttcttatgggaccaaaccgatacatgaaatcaagttaa 11046991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 42358017 - 42358075
Alignment:
Q  8 ggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||||||||  ||| || ||||| ||  ||||||||||||||||||||||||    
T  42358017 ggtctcaggttcgattttctctggcgccaatttgagtggactaatttagcttcttcaaa 42358075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2667915 - 2667980
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| |||||||||||||||||  |||  ||| ||| |||||||| ||| |||||||||||||||    
T  2667915 tcctcgaggtctcaggttcgattatctctagtgtcaatttaggtgggctagtttagcttcttcaaa 2667980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17035039 - 17035100
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    |||||||||||||||||||||||| |  ||||  ||| || |||||||||||||| ||||||    
T  17035039 tcctcaaggtctcaggttcgattctcctcggtatcaatttgggtggactaatttaacttctt 17035100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20501749 - 20501813
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||| ||||||||||||||||||| |||| ||||||| || |  || |||||||||||||||||||    
T  20501749 tccttaaggtctcaggttcgattctctccagtgccaa-tttgaggggctaatttagcttcttcaaa 20501813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 28253519 - 28253446
Alignment:
Q  122 taaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaa 195  Q
    |||||| || ||||||||||| ||  ||||| | ||||||| |||||| ||||| ||||||||||| |||||||    
T  28253519 taaacgaactttttattacttttgggaccaatctgatacttgaaatcatgttaagggaccaattgaacatttaa 28253446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 47454640 - 47454575
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| |||||||||||||||||| | ||  |||||| ||||||||  || |||||||||||||||    
T  47454640 tcctcgaggtctcaggttcgattctccccaatgccaatttaggtgggttagtttagcttcttcaaa 47454575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 49397564 - 49397499
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| |||||||| ||||||||  ||  | || ||| ||||||||||||||||||||||||||||    
T  49397564 tcctcgaggtctcatgttcgattatcttagatgtcaatttaggtggactaatttagcttcttcaaa 49397499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 53288859 - 53288814
Alignment:
Q  6 aaggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    ||||||||||| ||||||||||| |||||||| || ||||||||||    
T  53288859 aaggtctcaggctcgattccctctggtgccaatttcggtggactaa 53288814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 478863 - 478807
Alignment:
Q  9 gtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaa 65  Q
    |||||| |||| |||| |||||||| ||| ||| |||| ||||||||||||||||||    
T  478863 gtctcaagttcaattcactccggtgtcaatttaagtgggctaatttagcttcttcaa 478807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 2511443 - 2511399
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  2511443 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 2511399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 7973622 - 7973674
Alignment:
Q  14 aggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||| ||| | || ||| || |||||||||||||||||||||||||    
T  7973622 aggttcgattctctctgatgtcaatttgggtggactaatttagcttcttcaaa 7973674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 8456296 - 8456252
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  8456296 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 8456252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 12761574 - 12761630
Alignment:
Q  10 tctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||||||  | |||||||||| |||||||| ||| ||| |||||||||||    
T  12761574 tctcaggttcgattttccccggtgccaatttaggtgggctagttttgcttcttcaaa 12761630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 18177033 - 18176989
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||| ||||||||||||||||| |||||||| || ||||||||||    
T  18177033 aggtatcaggttcgattccctctggtgccaatttcggtggactaa 18176989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 26108343 - 26108387
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  26108343 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 26108387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 30807299 - 30807255
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  30807299 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 30807255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 33279034 - 33278978
Alignment:
Q  10 tctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||| ||||| |||||||| ||| |||| |||  ||||||||||||||||||    
T  33279034 tctcaggtttgattctctccggtgtcaatttagatgggataatttagcttcttcaaa 33278978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 35492962 - 35493006
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  35492962 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 35493006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 36015510 - 36015566
Alignment:
Q  10 tctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||| |||||| || ||||| ||| |||||||| ||||||| |||||||||||    
T  36015510 tctcaggtacgattctcttcggtgtcaatttaggtgggctaattttgcttcttcaaa 36015566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 40268546 - 40268606
Alignment:
Q  6 aaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||||||||||| | ||| |||||| || |||||  || |||||||||||||||    
T  40268546 aaggtctcaggttcgattctccccgatgccaatttcggtgggttagtttagcttcttcaaa 40268606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 47236991 - 47236935
Alignment:
Q  4 tcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttc 60  Q
    ||||||||||| ||||||||| | |||||||||| || ||||| || ||||||||||    
T  47236991 tcaaggtctcatgttcgattctccccggtgccaatttgggtgggcttatttagcttc 47236935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 1e-27; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 116 - 199
Target Start/End: Complemental strand, 36215731 - 36215648
Alignment:
Q  116 ggaatctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcca 199  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| |||| ||||||| |||||||||||||||||||||||    
T  36215731 ggaatctaaacggaccttttattacttatgggaccaaaccgatacttgaaattaagttaagggaccaattgagcatttaagcca 36215648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 8607852 - 8607778
Alignment:
Q  122 taaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaag 196  Q
    ||||||||||||||||||||||||  | ||||||||||||| ||||||||||||  |||||||||||||||||||    
T  8607852 taaacggaccttttattacttatgggatcaaaccgatacttgaaatcaagttaagagaccaattgagcatttaag 8607778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 17254736 - 17254813
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||||||| ||||||||||||||  | |||||| |||||| |||||||||||| ||||||||||||||||||||||    
T  17254736 ctaaacggacattttattacttatgagatcaaaccaatacttgaaatcaagttaagggaccaattgagcatttaagcc 17254813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 24039539 - 24039616
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    ||||||| |||||||||||||||||  |||||||| |||||| |||||||||||| ||||||||| ||||||||||||    
T  24039539 ctaaacgaaccttttattacttatgagaccaaaccaatacttgaaatcaagttaagggaccaattaagcatttaagcc 24039616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 1113287 - 1113212
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaag 196  Q
    |||||| ||| ||||||||||||||  ||||| ||||||||| |||||||||||| ||||||||||||||||||||    
T  1113287 ctaaacagactttttattacttatgggaccaacccgatacttgaaatcaagttaagggaccaattgagcatttaag 1113212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 24039327 - 24039249
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcca 199  Q
    ||||||| || ||||||||||||||  ||||||||||||||| |||||||||||| ||| ||||||| |||||||||||    
T  24039327 ctaaacgaactttttattacttatgggaccaaaccgatacttgaaatcaagttaagggatcaattgaacatttaagcca 24039249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 7949477 - 7949412
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||||||||| ||| |||| ||| |||||||| |||||||||||||||||||    
T  7949477 tcctcaaggtctcaggttcgattctctctggtgtcaatttaggtgggctaatttagcttcttcaaa 7949412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 55620270 - 55620193
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||| ||| ||||||||||||||  ||||||||||||||| |||||||||||| |||||||  |||||||||||||    
T  55620270 ctaaacagactttttattacttatgggaccaaaccgatacttgaaatcaagttaagggaccaaaagagcatttaagcc 55620193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 55627574 - 55627497
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||| ||| ||||||||||||||  ||||||||||||||| |||||||||||| |||||||  |||||||||||||    
T  55627574 ctaaacagactttttattacttatgggaccaaaccgatacttgaaatcaagttaagggaccaaaagagcatttaagcc 55627497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 1113467 - 1113545
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcca 199  Q
    |||||| ||||||||| || |||||  |||||| | |||||| |||||||||||| |||||||||||||||||||||||    
T  1113467 ctaaacagaccttttaatatttatgggaccaaatcaatacttgaaatcaagttaagggaccaattgagcatttaagcca 1113545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 29430193 - 29430257
Alignment:
Q  119 atctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaa 183  Q
    ||||||||  |||||||||||||||||  |||||||| ||||||||||||||||||| |||||||    
T  29430193 atctaaacataccttttattacttatgggaccaaaccaatacttaaaatcaagttaagggaccaa 29430257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 51250544 - 51250484
Alignment:
Q  2 cctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    ||||||| ||||| |||||||||||||||||||||| || ||||| |||||||||||||||    
T  51250544 cctcaagatctcaagttcgattccctccggtgccaatttgggtgggctaatttagcttctt 51250484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 198
Target Start/End: Complemental strand, 48018689 - 48018610
Alignment:
Q  119 atctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||||| ||  ||||||||||| ||  |||||||||||| || ||||||||||||  |||||||||||||||||||||    
T  48018689 atctaaacagatattttattacttttgggaccaaaccgatattttaaatcaagttaagagaccaattgagcatttaagcc 48018610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 2732047 - 2732109
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttc 63  Q
    ||||||| |||||||||||||||| |||||||||||| || ||||| ||| ||||||||||||    
T  2732047 tcctcaaagtctcaggttcgattctctccggtgccaatttgggtgggctagtttagcttcttc 2732109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 8030227 - 8030162
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||| |||||||||||||  ||| ||| || ||||| |||||||||||||||||||    
T  8030227 tcctcaaggtctcaagttcgattccctctagtgtcaatttgggtgggctaatttagcttcttcaaa 8030162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9693521 - 9693456
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||||||||||||||||||||  ||| ||| || ||||| |||||||| ||||||||||    
T  9693521 tcctcaaggtctcaggttcgattccctctagtgtcaatttgggtgggctaatttaccttcttcaaa 9693456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37274482 - 37274417
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||| ||||||||||| ||| ||||| || ||| |||| |||||||||||||||||||    
T  37274482 tcctcaaggtcttaggttcgattctctctggtgctaatttaagtgggctaatttagcttcttcaaa 37274417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 43099401 - 43099329
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    ||||||||||||||||||||||||| || |||||||||| ||||||     ||||  |||||||||||||||||||||    
T  43099401 ctaaacggaccttttattacttatggaatcaaaccgatatttaaaa-----ttaagagaccaattgagcatttaagcc 43099329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 46295150 - 46295211
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    |||||||||||||||||||||||| | |||||||||| || ||||| ||| |||||||||||    
T  46295150 tcctcaaggtctcaggttcgattctccccggtgccaatttgggtgggctagtttagcttctt 46295211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 28635755 - 28635814
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||| ||||||||||| ||| |||||||| || ||||| |||||||||||||||||||    
T  28635755 aggtcttaggttcgattctctctggtgccaatttgggtgggctaatttagcttcttcaaa 28635814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 49262701 - 49262642
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||| | || ||||||| |||||||| ||||||||| |||||||||    
T  49262701 aggtctcaggttcgattctccccagtgccaatttaggtgggctaatttagtttcttcaaa 49262642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 12793919 - 12793869
Alignment:
Q  16 gttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  12793919 gttcgattctctctggtgccaatttaggtgggctaatttagcttcttcaaa 12793869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 18525420 - 18525478
Alignment:
Q  8 ggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||| ||||||||| |||||||| ||| |||| |||||||||||| ||||||||||    
T  18525420 ggtctcatgttcgattctctccggtgtcaatttagatggactaatttaacttcttcaaa 18525478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 29430016 - 29429942
Alignment:
Q  119 atctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaa 195  Q
    |||||||||||| |||| ||||||| |  |||||||||||| || |||||||||||| |||||||  ||||||||||    
T  29430016 atctaaacggactttttcttacttagg--accaaaccgatatttgaaatcaagttaagggaccaaaagagcatttaa 29429942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 38838850 - 38838915
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||| ||||||||||| ||||| || ||| || ||||| ||||||||| |||||||||    
T  38838850 tcctcaaggtcttaggttcgattctctccgatggcaatttcggtgggctaatttagtttcttcaaa 38838915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 49576917 - 49576852
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||||||||| ||||  || ||| || |||||||||| ||| ||||||||||    
T  49576917 tcctcaaggtctcaggttcgattctctccaatgtcaatttgggtggactaacttaacttcttcaaa 49576852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 51622538 - 51622599
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    ||||||||||||||||||||| || ||| |||||||| || ||||| | |||||||||||||    
T  51622538 tcctcaaggtctcaggttcgactctctctggtgccaatttgggtgggccaatttagcttctt 51622599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 51954167 - 51954232
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| |||||||||||| ||||  |||||||| ||| || ||||| |||||||||||||||||||    
T  51954167 tcctcgaggtctcaggtttgattatctccggtgtcaatttgggtgggctaatttagcttcttcaaa 51954232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 32992665 - 32992729
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaa 65  Q
    |||||||||||||| ||||||||| | |||||| ||| ||  |||||||| ||||||||||||||    
T  32992665 tcctcaaggtctcaagttcgattctccccggtgtcaatttgagtggactagtttagcttcttcaa 32992729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 38869821 - 38869857
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaa 37  Q
    |||||||||||||||||||||||||||| ||||||||    
T  38869821 tcctcaaggtctcaggttcgattccctctggtgccaa 38869857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 34075563 - 34075625
Alignment:
Q  3 ctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||| ||||| ||| | | |||| |||| |||||||||||||||||||||||    
T  34075563 ctcaaggtctcaggttagattctctctg-taccaatttagatggactaatttagcttcttcaaa 34075625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 55561085 - 55561022
Alignment:
Q  132 ttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaa 195  Q
    |||||||||||||| |||||||| |||  || |||||||||||| ||| |||| ||||||||||    
T  55561085 ttttattacttatggaaccaaactgatgtttgaaatcaagttaagggatcaatcgagcatttaa 55561022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 3611701 - 3611655
Alignment:
Q  16 gttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    ||||||||||| |||||| ||| |||||||| |||||||||||||||    
T  3611701 gttcgattccccccggtgtcaatttaggtgggctaatttagcttctt 3611655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 47386808 - 47386750
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaa 65  Q
    ||||||||||||| |||| |||  ||| ||| |||||||| ||||||||||||||||||    
T  47386808 aggtctcaggttcaattctctctagtgtcaatttaggtgggctaatttagcttcttcaa 47386750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 51535664 - 51535710
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaatt 53  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||||    
T  51535664 aggtctcaggttcgattccctctggtgccaattttggtgggctaatt 51535710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 4483324 - 4483259
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||||||||||| ||||  |||||||||   ||  |||||| |||||||||||||||||    
T  4483324 tcctcaaggtctcaggttcaattctttccggtgcctgtttgagtggacaaatttagcttcttcaaa 4483259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 12848538 - 12848485
Alignment:
Q  3 ctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttag 56  Q
    |||||| |||||| |||||||| ||||| || ||| ||||||||||||||||||    
T  12848538 ctcaagatctcagattcgattctctccgctgacaatttaggtggactaatttag 12848485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17618334 - 17618399
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| |||||||| ||||| ||||||||||  |||| |||||| | ||| |||||||||||||||    
T  17618334 tcctcgaggtctcatgttcgtttccctccggcaccaatttaggttggctagtttagcttcttcaaa 17618399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 23378009 - 23378074
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||||||||| |||  ||||||| ||  | || ||| |||||||||||||||    
T  23378009 tcctcaaggtctcaggttcgattctctctagtgccaatttgagggggctagtttagcttcttcaaa 23378074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 25852264 - 25852309
Alignment:
Q  6 aaggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    ||||||||||||||||||||||| |||||||| || ||||| ||||    
T  25852264 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 25852309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 26356874 - 26356935
Alignment:
Q  5 caaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||| ||||| ||||||||| | || ||||||| |||||||| ||| |||||||||||||||    
T  26356874 caagatctcatgttcgattctccccagtgccaatttaggtgggctagtttagcttcttcaaa 26356935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 29312271 - 29312222
Alignment:
Q  17 ttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||| ||| |||||||| |||||||| |||||||||||| ||||||    
T  29312271 ttcgattctctctggtgccaatttaggtgggctaatttagctttttcaaa 29312222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30938242 - 30938177
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| |||||||||||||||||| | ||  |||||| ||||||||  || |||||||||||||||    
T  30938242 tcctcgaggtctcaggttcgattctccccaatgccaatttaggtgggttagtttagcttcttcaaa 30938177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37720237 - 37720172
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||| |||||||||||| | | ||   ||| |||||||| |||||||||||||||||||    
T  37720237 tcctcaaggtcccaggttcgattctcccagggatcaatttaggtgggctaatttagcttcttcaaa 37720172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 2351064 - 2351108
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||| ||||||    
T  2351064 aggtctcaggttcgattccctctggtgccaatttcggtcgactaa 2351108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 27528941 - 27528897
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  27528941 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 27528897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 37109374 - 37109338
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaa 37  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  37109374 tcctcaaggtctcaggttcgattctctctggtgccaa 37109338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 55427217 - 55427165
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaatttagctt 59  Q
    |||||||||||||||||| |  ||||||||| || ||||| ||||||||||||    
T  55427217 aggtctcaggttcgattctccgcggtgccaatttgggtgggctaatttagctt 55427165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 2e-26; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 12702004 - 12701927
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||||||||||||||||||||||  ||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  12702004 ctaaacggaccttttattacttatgggaccaaaccgatacttgaaatcaagttaaaggaccaattgagcatttaagcc 12701927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 12261114 - 12261192
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcca 199  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  12261114 ctaaacggaccttttattgcttatgtgaccaaaccgatacttgaaatcaagttaagggaccaattgaacatttaagcca 12261192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 12702216 - 12702293
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||||||||||||||||||||||  ||||||||||||||| | |||||||||| |||| |||||||||||||||||    
T  12702216 ctaaacggaccttttattacttatgggaccaaaccgatacttgatatcaagttaagggactaattgagcatttaagcc 12702293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 119 - 198
Target Start/End: Complemental strand, 21304407 - 21304328
Alignment:
Q  119 atctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    ||||||||| || ||||||||||||||  |||||||||||| || |||||||||||| ||| ||||||||||||||||||    
T  21304407 atctaaacgaacattttattacttatgggaccaaaccgatatttgaaatcaagttaagggatcaattgagcatttaagcc 21304328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12086152 - 12086091
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    ||||||||||||| |||||||||||||||||||| || |||||||| |||||||||||||||    
T  12086152 tcctcaaggtctcgggttcgattccctccggtgctaatttaggtgggctaatttagcttctt 12086091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30808670 - 30808605
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||||||| |||||||| || |||| |||||||||||||||||||||||||| ||||||    
T  30808670 tcctcaaggtctcagtttcgattctcttcggtaccaacttaggtggactaatttagctttttcaaa 30808605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 37971951 - 37972013
Alignment:
Q  4 tcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||| |||||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||    
T  37971951 tcaaagtctcaggttcgattctctccggtgccaatttaggtgggctaatttagcttctacaaa 37972013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 37480128 - 37480193
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||||||||| | ||||| |||| || ||||| |||||||||||||||||||    
T  37480128 tcctcaaggtctcaggttcgattctccccggtcccaatttgggtgggctaatttagcttcttcaaa 37480193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 42602609 - 42602672
Alignment:
Q  3 ctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||| ||||| ||||| |||||||||||| || ||||| |||||||||||||||||||    
T  42602609 ctcaaggtcttaggtttgattctctccggtgccaatttgggtgggctaatttagcttcttcaaa 42602672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 38854485 - 38854420
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||||||||  | |||| | ||| |||||||| |||||||||||||||||||    
T  38854485 tcctcaaggtctcaggttcgattatcaccggggtcaatttaggtgggctaatttagcttcttcaaa 38854420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 42327418 - 42327357
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    |||||||||||||||||||||||| || ||||||||| || ||||| |||||||||| ||||    
T  42327418 tcctcaaggtctcaggttcgattctcttcggtgccaatttgggtgggctaatttagcatctt 42327357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 21213828 - 21213887
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||| | |||||||||| |||||||| ||| ||| |||||||||||    
T  21213828 aggtctcaggttcgattctccccggtgccaatttaggtgggctagttttgcttcttcaaa 21213887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 25637210 - 25637269
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||| ||| ||||| |||||| |||||||| |||||||| ||||||||||    
T  25637210 aggtctcaggttcggttctctccgatgccaatttaggtgggctaatttaacttcttcaaa 25637269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 33582032 - 33582091
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||| |||   || ||| ||||||||||||||||||||||||||||    
T  33582032 aggtctcaggttcgattctctctaatgtcaatttaggtggactaatttagcttcttcaaa 33582091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 1435117 - 1435181
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||||||| |||||||| ||| |||| ||| || ||||| |||||||||||||||||||    
T  1435117 tcctcaaggtctcag-ttcgattctctctggtgtcaatttgggtgggctaatttagcttcttcaaa 1435181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 2217691 - 2217622
Alignment:
Q  129 accttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    ||||||||||||||||| |||||||||||||  | |||||||||||| ||| ||   |||||||||||||    
T  2217691 accttttattacttatggaaccaaaccgatatctgaaatcaagttaagggatcagaagagcatttaagcc 2217622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21195699 - 21195638
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    ||||||||||||||||||||||||||||  ||| ||| || | ||| |||||||||||||||    
T  21195699 tcctcaaggtctcaggttcgattccctctagtgtcaatttggatgggctaatttagcttctt 21195638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 26276408 - 26276469
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    |||||||||||||||||||| ||| |  ||||| ||| ||||||||||| ||||||||||||    
T  26276408 tcctcaaggtctcaggttcgtttctcgtcggtgtcaatttaggtggactgatttagcttctt 26276469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29503324 - 29503388
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||||||||| | |||||| ||| ||| |||| | |||||||||||||||||    
T  29503324 tcctcaaggtctcaggttcgattctc-ccggtgtcaatttaagtgggcaaatttagcttcttcaaa 29503388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33569881 - 33569820
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    ||||| |||||||||||||||||| ||| ||||| || ||| |||||||||||| |||||||    
T  33569881 tcctcgaggtctcaggttcgattctctctggtgctaatttaagtggactaattttgcttctt 33569820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41908661 - 41908596
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||| ||||||||  | |||||||||| || ||||| ||| |||||||||||||||    
T  41908661 tcctcaaggtctcaagttcgattatccccggtgccaatttgggtgggctagtttagcttcttcaaa 41908596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 2217898 - 2217973
Alignment:
Q  122 taaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    ||||||||| ||||||||||||||  ||||||||  ||||| |||||||||||| |||||||  ||||||| |||||    
T  2217898 taaacggacattttattacttatgggaccaaaccattacttgaaatcaagttaa-ggaccaaaagagcattaaagcc 2217973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 31573656 - 31573600
Alignment:
Q  9 gtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaa 65  Q
    |||||||||||||||| || || || ||| ||||||||||||||||| |||||||||    
T  31573656 gtctcaggttcgattctcttcgatgtcaatttaggtggactaatttaacttcttcaa 31573600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 8192501 - 8192467
Alignment:
Q  3 ctcaaggtctcaggttcgattccctccggtgccaa 37  Q
    |||||||||||||||||||||||||| ||||||||    
T  8192501 ctcaaggtctcaggttcgattccctctggtgccaa 8192467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 42420324 - 42420362
Alignment:
Q  3 ctcaaggtctcaggttcgattccctccggtgccaactta 41  Q
    |||||||||||| ||||||||||||||| ||||||||||    
T  42420324 ctcaaggtctcatgttcgattccctccgatgccaactta 42420362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 3568554 - 3568627
Alignment:
Q  122 taaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaa 195  Q
    |||| ||||||||||||| |||||  | ||||||||||||| |||||||| | | ||||||||| | |||||||    
T  3568554 taaatggaccttttattatttatgggatcaaaccgatacttgaaatcaagatgaaggaccaatttaacatttaa 3568627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 7799058 - 7798994
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| || |||||| |||||||| |||| ||||||| ||| |||| |||||||||||||||||||    
T  7799058 tcctcgagatctcagattcgattctctccagtgccaatttaagtgg-ctaatttagcttcttcaaa 7798994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 8280958 - 8280902
Alignment:
Q  9 gtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| |||||||||| |||||| | ||| ||| ||||||||||||||||||||||||    
T  8280958 gtctccggttcgattctctccgg-gtcaatttaagtggactaatttagcttcttcaaa 8280902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 11251140 - 11251205
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||| ||||| ||| |||| ||| |||||||  |||||||| ||| ||||||    
T  11251140 tcctcaaggtctcaggtttgattctctctggtgtcaatttaggtgtgctaatttaacttattcaaa 11251205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 12517776 - 12517712
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||| ||| ||||| | | |||||||| || ||||| |||||||||||||||||||    
T  12517776 tcctcaaggtctcatgtttgattctccctggtgccaa-ttgggtgggctaatttagcttcttcaaa 12517712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23052546 - 23052481
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||||||||| | |  ||||||  || ||||| ||||||||| |||||||||    
T  23052546 tcctcaaggtctcaggttcgattctccctagtgccagtttgggtgggctaatttagtttcttcaaa 23052481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 34041611 - 34041546
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||| ||||||||| |||||||| ||  | ||  || |||||||||||||||    
T  34041611 tcctcaaggtctcaggtttgattccctctggtgccaatttgagggggttagtttagcttcttcaaa 34041546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 36390715 - 36390670
Alignment:
Q  6 aaggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||| |||| |||||||| || ||||||||||    
T  36390715 aaggtctcaggttcgatttcctctggtgccaatttcggtggactaa 36390670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 10582136 - 10582092
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  10582136 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 10582092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 14780562 - 14780622
Alignment:
Q  4 tcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttca 64  Q
    ||||||||||||||||||| | | ||| |||||| ||  |||| |||||||||||||||||    
T  14780562 tcaaggtctcaggttcgatcctccccgatgccaatttgagtgggctaatttagcttcttca 14780622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 16525232 - 16525276
Alignment:
Q  3 ctcaaggtctcaggttcgattccctccggtgccaacttaggtgga 47  Q
    |||||||||||||||||||||| | |||||||||| || ||||||    
T  16525232 ctcaaggtctcaggttcgattctccccggtgccaatttcggtgga 16525276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 17324817 - 17324861
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  17324817 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 17324861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 19244166 - 19244222
Alignment:
Q  5 caaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttct 61  Q
    |||||||||||||||||||| ||| |||||||| ||  |||| ||||||||| ||||    
T  19244166 caaggtctcaggttcgattctctctggtgccaatttgagtgggctaatttagtttct 19244222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 25293217 - 25293261
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  25293217 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 25293261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 27290639 - 27290683
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    ||||||||||||||||||||| ||||||||| || ||||| ||||    
T  27290639 aggtctcaggttcgattcccttcggtgccaatttcggtgggctaa 27290683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 32826736 - 32826772
Alignment:
Q  26 ctccggtgccaacttaggtggactaatttagcttctt 62  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  32826736 ctccggtgccaacttaggtgggctagtttagcttctt 32826772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 39764992 - 39765044
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaatttagctt 59  Q
    ||||||||||||||||||||||  ||| ||| |||| ||| ||||||||||||    
T  39764992 aggtctcaggttcgattccctctagtgtcaatttagctgggctaatttagctt 39765044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 43374471 - 43374427
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  43374471 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 43374427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 44976300 - 44976256
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  44976300 aggtctcaggttcgattccctctggtgccaattttggtgggctaa 44976256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 119 - 198
Target Start/End: Complemental strand, 10394209 - 10394130
Alignment:
Q  119 atctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    ||||||||| |||||||||||||||||  ||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  10394209 atctaaacgaaccttttattacttatgggaccaaaccgatacttgaaatcaagttaagggaccaattgagcatttaagcc 10394130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 39277872 - 39277949
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||||||| ||||||||||||||  ||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  39277872 ctaaacggactttttattacttatgggaccaaaccgatacttgaaatcaagttaagggaccaattgagcatttaagcc 39277949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 28990376 - 28990298
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcca 199  Q
    |||| ||||||||||||||||||||  ||||||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  28990376 ctaagcggaccttttattacttatgggaccaaaccgatacttgaaatcaagttaagggaccaattaagcatttaagcca 28990298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 19920582 - 19920505
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    ||||||||| |||||||||||||||  ||||||||||||||| |||||||||||| ||| ||||||||||||||||||    
T  19920582 ctaaacggatcttttattacttatgggaccaaaccgatacttgaaatcaagttaagggatcaattgagcatttaagcc 19920505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 47422151 - 47422228
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||| ||||| ||||||||||||  ||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  47422151 ctaaacagacctcttattacttatgggaccaaaccgatacttgaaatcaagttaagggaccaattgagcatttaagcc 47422228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 28990588 - 28990665
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||||||||||||||||||||||  |||||||| |||||| |||||||||||| |||||||||||  |||||||||    
T  28990588 ctaaacggaccttttattacttatgggaccaaaccaatacttgaaatcaagttaagggaccaattgaatatttaagcc 28990665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 36077144 - 36077222
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcca 199  Q
    |||||| ||||||||||||||||||  | ||||||||||||| |||||||||||| | || ||||||||||||||||||    
T  36077144 ctaaacagaccttttattacttatgggagcaaaccgatacttgaaatcaagttaaggaactaattgagcatttaagcca 36077222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 39277659 - 39277585
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaa 195  Q
    |||||||||| ||||||||||||||  ||||||| ||||||| |||| ||||||| |||||||||||||||||||    
T  39277659 ctaaacggactttttattacttatgggaccaaactgatacttgaaattaagttaagggaccaattgagcatttaa 39277585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 27334422 - 27334349
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcattta 194  Q
    ||||||||| |||||||||||||||  |||||| |||||||| |||||||||||| |||| |||||||||||||    
T  27334422 ctaaacggatcttttattacttatgagaccaaatcgatacttgaaatcaagttaagggactaattgagcattta 27334349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 47421968 - 47421891
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||| ||| ||||||||||||||  |||||||||||| || |||||||||||| ||||||||||||||| ||||||    
T  47421968 ctaaacagacattttattacttatgggaccaaaccgatatttgaaatcaagttaagggaccaattgagcatgtaagcc 47421891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 198
Target Start/End: Complemental strand, 49186076 - 49186000
Alignment:
Q  122 taaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||||||||||||||||||||   ||||||| ||||||| |||||||||||| | || |||||||||||||||||    
T  49186076 taaacggaccttttattacttataagaccaaactgatacttgaaatcaagttaaggaactaattgagcatttaagcc 49186000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 45822869 - 45822787
Alignment:
Q  116 ggaatctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||| |||||||||| ||||||||||||||  ||||||  ||||||| |||| ||||||| |||||||||||||| |||||||    
T  45822869 ggaacctaaacggactttttattacttatgggaccaaattgatacttgaaattaagttaagggaccaattgagcacttaagcc 45822787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 45823077 - 45823155
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcca 199  Q
    |||||||||| ||||||||||||||  |||||||| ||| || |||||||||||| ||| ||||||| |||||||||||    
T  45823077 ctaaacggactttttattacttatgggaccaaaccaatatttgaaatcaagttaagggatcaattgaacatttaagcca 45823155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 51814547 - 51814605
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagctt 59  Q
    |||||||||||||||||||||||| |||||||||||| || ||||| ||||||||||||    
T  51814547 tcctcaaggtctcaggttcgattctctccggtgccaatttgggtgggctaatttagctt 51814605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 6122847 - 6122912
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||||||||||||||||||||  ||| ||| || ||||| |||||||||||||||||||    
T  6122847 tcctcaaggtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttcaaa 6122912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12587323 - 12587387
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| |||||||||||||||||| |||||||| ||| |||||||| |||||||||||||||||||    
T  12587323 tcctcgaggtctcaggttcgattctctccggtg-caatttaggtgggctaatttagcttcttcaaa 12587387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 10394420 - 10394496
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagc 197  Q
    |||||||||||||||| || |||||  |||||| | |||||| |||||||||||| | |||||||||||||||||||    
T  10394420 ctaaacggaccttttaatatttatgggaccaaaacaatacttgaaatcaagttaaggaaccaattgagcatttaagc 10394496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 197
Target Start/End: Original strand, 30050210 - 30050281
Alignment:
Q  126 cggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagc 197  Q
    ||||| ||||||||||| ||  ||||||||||||||| ||||||||||||||||||||  || |||||||||    
T  30050210 cggactttttattacttgtgcgaccaaaccgatacttgaaatcaagttaatggaccaaaagaacatttaagc 30050281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 6650648 - 6650713
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||| |||||||||||||||| ||| |||| ||| ||||||||| || |||||||||||||||    
T  6650648 tcctcaatgtctcaggttcgattctctctggtgtcaatttaggtggattagtttagcttcttcaaa 6650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 36076962 - 36076885
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    ||||||| |||||||||||||||||  | ||| ||||||||| |||||||||||| ||| ||||| | ||||||||||    
T  36076962 ctaaacgaaccttttattacttatgggatcaagccgatacttgaaatcaagttaagggaacaattaaacatttaagcc 36076885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 52285342 - 52285419
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||| |||||||||||||||||   ||||||  |||||||||||||||||||| |||||||  || ||||||||||    
T  52285342 ctaaacagaccttttattacttataggaccaaattgatacttaaaatcaagttaagggaccaaaagaacatttaagcc 52285419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 195
Target Start/End: Complemental strand, 30049990 - 30049918
Alignment:
Q  123 aaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaa 195  Q
    |||||||| ||||||||| ||||  ||||||||||||||| |||| ||||||| |||||||  ||||||||||    
T  30049990 aaacggactttttattacatatgagaccaaaccgatacttgaaataaagttaagggaccaaaagagcatttaa 30049918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 1094584 - 1094643
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||  |||||||| |||||||||||| |||||||| |||||||| ||||||||||    
T  1094584 aggtctcaaattcgattctctccggtgccaatttaggtgggctaatttaacttcttcaaa 1094643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 175
Target Start/End: Complemental strand, 7714238 - 7714195
Alignment:
Q  132 ttttattacttatgtaaccaaaccgatacttaaaatcaagttaa 175  Q
    ||||||||||||||  ||||||||||||||||||||||||||||    
T  7714238 ttttattacttatgggaccaaaccgatacttaaaatcaagttaa 7714195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 15158400 - 15158349
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagt 172  Q
    ||||||| |||||||||||||||||  ||||||||||||||| |||||||||    
T  15158400 ctaaacgaaccttttattacttatgggaccaaaccgatacttgaaatcaagt 15158349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 18037627 - 18037572
Alignment:
Q  10 tctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaa 65  Q
    ||||| ||||||||| |||||||||| | |||||||| ||||||||||||||||||    
T  18037627 tctcaagttcgattctctccggtgccgatttaggtgggctaatttagcttcttcaa 18037572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 48400226 - 48400273
Alignment:
Q  3 ctcaaggtctcaggttcgattccctccggtgccaacttaggtggacta 50  Q
    ||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  48400226 ctcaaggtctcaggtgcgattctctccggtgccaatttaggtggacta 48400273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 7219933 - 7219876
Alignment:
Q  9 gtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||| ||  | | |||| ||||||||||||||||||||||||||||    
T  7219933 gtctcaggttcgattctctttgataccaatttaggtggactaatttagcttcttcaaa 7219876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16893447 - 16893512
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| |||||||||||||||||  |||||||| ||| ||  |||| |||||||||||||||||||    
T  16893447 tcctcgaggtctcaggttcgattttctccggtgtcaatttgagtgggctaatttagcttcttcaaa 16893512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 16959139 - 16959204
Alignment:
Q  132 ttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagc 197  Q
    ||||||||||||||  ||||||||||||||| ||||||||| || ||| |||  ||||||||||||    
T  16959139 ttttattacttatgggaccaaaccgatacttgaaatcaagtcaaaggatcaaaagagcatttaagc 16959204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19940895 - 19940830
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||| ||||||||||||| ||||| |||||||||||| ||| |||| ||  |||||||||||||||    
T  19940895 tccttaaggtctcaggtttgattctctccggtgccaatttatgtgggctggtttagcttcttcaaa 19940830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29753702 - 29753767
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||||||||| ||| |||||||| ||| | ||  || |||||||||||||||    
T  29753702 tcctcaaggtctcaggttcgattctctctggtgccaatttaagagggttagtttagcttcttcaaa 29753767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30203250 - 30203185
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||||||||||| |||| ||||| |||||| || ||  | |||||||||||||||||||    
T  30203250 tcctcaaggtctcaggttcaattctctccgatgccaattttggctggctaatttagcttcttcaaa 30203185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 31605871 - 31605806
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||| ||||||||| | |||||||||| || ||||| ||| |||||| ||||||||    
T  31605871 tcctcaaggtctcaagttcgattctccccggtgccaatttgggtgggctagtttagcctcttcaaa 31605806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 31794287 - 31794222
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||||   ||||||||||||| |||| ||| || ||||| |||||||||||||||||||    
T  31794287 tcctcaaggtctagagttcgattccctctggtgtcaatttgggtgggctaatttagcttcttcaaa 31794222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 45266887 - 45266952
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||||||||| | |||||||||| || | ||| ||| |||||||| ||||||    
T  45266887 tcctcaaggtctcaggttcgattctccccggtgccaatttggatgggctagtttagcttattcaaa 45266952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 42983384 - 42983336
Alignment:
Q  14 aggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    ||||||||||| ||| |||||||| ||| ||||||||||||||||||||    
T  42983384 aggttcgattctctcaggtgccaatttaagtggactaatttagcttctt 42983336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 121 - 173
Target Start/End: Complemental strand, 52285131 - 52285079
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagtt 173  Q
    |||||||||| ||||||||||||||  |||||||| ||||||||||| |||||    
T  52285131 ctaaacggactttttattacttatgagaccaaaccaatacttaaaattaagtt 52285079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 6128008 - 6127945
Alignment:
Q  3 ctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||| ||||||||| | |||||||||| || ||||| ||| ||| |||||||||||    
T  6128008 ctcaaggtctcaagttcgattctccccggtgccaattttggtgggctagtttggcttcttcaaa 6127945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 160
Target Start/End: Original strand, 10719614 - 10719653
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatac 160  Q
    ||||||||||||||||||||||||| ||||||| ||||||    
T  10719614 ctaaacggaccttttattacttatggaaccaaagcgatac 10719653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 3799970 - 3800020
Alignment:
Q  12 tcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    ||||||||||||| |||  ||||||| |||||||| |||||||||||||||    
T  3799970 tcaggttcgattctctctagtgccaatttaggtgggctaatttagcttctt 3800020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 10526876 - 10526942
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaag 67  Q
    ||||||||||||||| |||||||| ||| || | ||| || |||||  |||||||||||||||||||    
T  10526876 tcctcaaggtctcagattcgattctctctggagtcaatttgggtgggttaatttagcttcttcaaag 10526942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 16958919 - 16958865
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaa 175  Q
    ||||| ||||||||||||| |||||  |||||||||| |||| ||||||||||||    
T  16958919 ctaaatggaccttttattatttatgggaccaaaccgacacttgaaatcaagttaa 16958865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17297037 - 17297099
Alignment:
Q  1 tcctcaaggtctcaggttcgattc-cctccggtgccaacttaggtggactaatttagcttctt 62  Q
    |||||||||||||| ||| ||||| || |||||||||| || ||||| |||||||||||||||    
T  17297037 tcctcaaggtctcatgtttgattctcccccggtgccaatttgggtgggctaatttagcttctt 17297099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 168251 - 168296
Alignment:
Q  6 aaggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    ||||||||||||||||||||||| |||||||| || ||||| ||||    
T  168251 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 168296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2799915 - 2799980
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||||||||| ||| |||||||| ||  | ||  || |||||||||||||||    
T  2799915 tcctcaaggtctcaggttcgattctctctggtgccaatttgagggggttagtttagcttcttcaaa 2799980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15065018 - 15065079
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    ||||||||||||||||||| |||  | |||||| ||| || ||||| |||||||||||||||    
T  15065018 tcctcaaggtctcaggttcaattttccccggtgtcaatttgggtgggctaatttagcttctt 15065079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21547503 - 21547438
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| |||| ||||||||||||| ||| | |||||| |||||||| ||| |||| ||||||||||    
T  21547503 tcctcgaggtttcaggttcgattctctctgatgccaatttaggtgggctagtttaacttcttcaaa 21547438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 23471100 - 23471043
Alignment:
Q  9 gtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||| |||||||| ||| ||  || | |||||||||||||||||||    
T  23471100 gtctcaggttcgattctctccggtgtcaatttgagttggctaatttagcttcttcaaa 23471043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 24019076 - 24019141
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||| ||||||||||| |  |||| |||| || ||||| ||| |||||||||||||||    
T  24019076 tcctcaaggtcttaggttcgattctcctcggtaccaatttcggtgggctagtttagcttcttcaaa 24019141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 34460932 - 34460867
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||| |||||||||| ||| |||  ||| ||| |||| |||||||||||||||||| |||||||||    
T  34460932 tcctgaaggtctcagattcaattatctctggttccaatttaggtggactaatttagtttcttcaaa 34460867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 36428765 - 36428830
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||| ||| ||||| | |||||||||| || ||||| ||| ||| |||||||||||    
T  36428765 tcctcaaggtctcatgtttgattctccccggtgccaatttgggtgggctagttttgcttcttcaaa 36428830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41508884 - 41508945
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    ||||||||||||||| ||  ||||| ||||||| ||||||  |||| |||||||||||||||    
T  41508884 tcctcaaggtctcagatttaattccatccggtgtcaacttgagtgggctaatttagcttctt 41508945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 44961818 - 44961879
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    |||||| ||||||||||||||||| |||  ||| ||| || ||||| |||||||||||||||    
T  44961818 tcctcagggtctcaggttcgattctctctagtgtcaatttgggtgggctaatttagcttctt 44961879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 46607860 - 46607905
Alignment:
Q  6 aaggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    ||||||||||||||||||||||| |||||||| || ||||| ||||    
T  46607860 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 46607905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 48619232 - 48619167
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||| |||||||||| |||  |||||||| ||| ||  ||||||||||||| ||||||||||    
T  48619232 tcctcaagatctcaggttctattatctccggtgtcaatttgagtggactaatttaacttcttcaaa 48619167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 51281404 - 51281469
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||| ||||| |||||| ||||| || |||   ||| |||||||||||||||    
T  51281404 tcctcaaggtctcaggtttgattctctccggcgccaatttgggtaagctagtttagcttcttcaaa 51281469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 4621383 - 4621339
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  4621383 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 4621339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 17745279 - 17745216
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaa 65  Q
    ||||| |||||||| ||||||||| ||| |||| ||| ||||||||  |||||||||||||||||    
T  17745279 tcctcgaggtctcatgttcgattctctctggtgtcaatttaggtggt-taatttagcttcttcaa 17745216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 24122074 - 24122118
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  24122074 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 24122118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 24674444 - 24674488
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  24674444 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 24674488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 33700796 - 33700760
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaa 37  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  33700796 tcctcaaggtctcaggttcgattctctctggtgccaa 33700760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 34228928 - 34228984
Alignment:
Q  3 ctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagctt 59  Q
    |||||||||||||||| ||||| |||||||||||| || ||||| ||| ||| ||||    
T  34228928 ctcaaggtctcaggttggattctctccggtgccaattttggtgggctagtttggctt 34228984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 45859189 - 45859145
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  45859189 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 45859145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 9e-22; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 13557429 - 13557506
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||||||||||||||||||||||  ||||||||||||||| |||||||||||| |||||| |||| ||||||||||    
T  13557429 ctaaacggaccttttattacttatgggaccaaaccgatacttgaaatcaagttaagggaccagttgaacatttaagcc 13557506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 13557217 - 13557139
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcca 199  Q
    ||||||| |||||||||||||||||  ||||||||||||||| |||||||||||| ||||| ||||| |||||||||||    
T  13557217 ctaaacgaaccttttattacttatgggaccaaaccgatacttgaaatcaagttaagggaccgattgaacatttaagcca 13557139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 31933559 - 31933638
Alignment:
Q  119 atctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    ||||||| |||| ||||||||||||||  ||||||||||||||| |||||||||||| |||||||  |||||||||||||    
T  31933559 atctaaatggactttttattacttatgggaccaaaccgatacttgaaatcaagttaagggaccaaaagagcatttaagcc 31933638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 968415 - 968476
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    ||||| |||||||||||||||||| ||||| |||||| |||||||| |||||||||||||||    
T  968415 tcctcgaggtctcaggttcgattctctccgatgccaatttaggtgggctaatttagcttctt 968476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 12654991 - 12655064
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcattta 194  Q
    ||||||||| |||||||||||||||  ||||||||||||||| |||||||||||| ||| |||  |||||||||    
T  12654991 ctaaacggaacttttattacttatgggaccaaaccgatacttgaaatcaagttaagggatcaaaagagcattta 12655064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 18847435 - 18847367
Alignment:
Q  129 accttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||||||||||||||  ||||| | ||||||| |||||||||||| ||||||||||||||||||||||    
T  18847435 accttttattacttatgagaccaatc-gatacttgaaatcaagttaagggaccaattgagcatttaagcc 18847367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29858072 - 29858007
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| ||||||||||||||||||||  ||||||||| |||||||| |||||||||||| ||||||    
T  29858072 tcctcgaggtctcaggttcgattcccctcggtgccaatttaggtgggctaatttagctttttcaaa 29858007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 8485058 - 8485117
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||  |||||||| |||||||||||| |||||||| |||||||||||||||||||    
T  8485058 aggtctcattttcgattctctccggtgccaatttaggtgggctaatttagcttcttcaaa 8485117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 198
Target Start/End: Complemental strand, 31933352 - 31933273
Alignment:
Q  119 atctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||||  ||||||||||||||||||  |||||||| |||||||||||||| |||| |||||||  || ||||||||||    
T  31933352 atctaaatagaccttttattacttatgggaccaaaccaatacttaaaatcaaattaagggaccaaaagaacatttaagcc 31933273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 198
Target Start/End: Complemental strand, 36194706 - 36194627
Alignment:
Q  119 atctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||||| ||| ||||||||||||||  |||||| |||||||| |||||||||||| |||| ||  |||||||||||||    
T  36194706 atctaaacagactttttattacttatgggaccaaaacgatacttgaaatcaagttaagggactaaaagagcatttaagcc 36194627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 6536573 - 6536635
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttc 63  Q
    ||||||||||||||||||| |||| ||| |||||||| ||||||||  |||||||||||||||    
T  6536573 tcctcaaggtctcaggttcaattctctctggtgccaatttaggtgggttaatttagcttcttc 6536635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 11819829 - 11819894
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||||||||| |||  ||| ||| || ||||| |||||||||||||||||||    
T  11819829 tcctcaaggtctcaggttcgattcactctagtgtcaatttgggtgggctaatttagcttcttcaaa 11819894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27750783 - 27750844
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    ||||||||||||||||||||||||||||  ||| ||| || | |||||||||||||||||||    
T  27750783 tcctcaaggtctcaggttcgattccctctagtgtcaatttggatggactaatttagcttctt 27750844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 28783113 - 28783178
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||| ||||||||| |  ||||||||| || ||||| |||||||||||||||||||    
T  28783113 tcctcaaggtctcatgttcgattctcctcggtgccaatttgggtgggctaatttagcttcttcaaa 28783178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 36194917 - 36194994
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||||||  ||| |||| |||||  |||||||||||||||||||||||||||| |||| ||  |||||||||||||    
T  36194917 ctaaacggatttttgattatttatgggaccaaaccgatacttaaaatcaagttaagggactaaaagagcatttaagcc 36194994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 44780137 - 44780072
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||| |||||||||  ||| ||| || ||||| |||||||||||||||||||    
T  44780137 tcctcaaggtctcaggtttgattccctctagtgtcaatttgggtgggctaatttagcttcttcaaa 44780072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 12654783 - 12654703
Alignment:
Q  116 ggaatctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaag 196  Q
    |||| ||||| ||||||||||||| |||||  |||||||||| |||| |||| ||||||| |||||||  |||||||||||    
T  12654783 ggaaactaaatggaccttttattatttatgggaccaaaccgacacttgaaataaagttaagggaccaaaagagcatttaag 12654703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 3624636 - 3624697
Alignment:
Q  4 tcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||||||||||||| |||||| | ||| |||||||| |||||||||||| ||||||    
T  3624636 tcaaggtctcaggttcgattctctccgg-gtcaatttaggtgggctaatttagctttttcaaa 3624697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 18847635 - 18847701
Alignment:
Q  132 ttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    ||||||||||||||  || |||| ||||||| |||||||||||| |||| |||| ||||||||||||    
T  18847635 ttttattacttatgggacaaaactgatacttgaaatcaagttaagggactaattaagcatttaagcc 18847701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 36205248 - 36205311
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||| ||||||||| | |||||  ||| |||| |||||||||||||||||||||||    
T  36205248 tcctcaaggtctcatgttcgattctccccggt--caatttagatggactaatttagcttcttcaaa 36205311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2203545 - 2203610
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||| || |||| | |||||||||| || ||||| |||||||||||| ||||||    
T  2203545 tcctcaaggtctcagggtcaattctccccggtgccaatttgggtgggctaatttagcttattcaaa 2203610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13129721 - 13129786
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||| ||||||||||||| ||| |||||||| || | |||| ||||||||||| ||||||    
T  13129721 tcctcaaggtttcaggttcgattctctctggtgccaatttggatggattaatttagcttattcaaa 13129786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18540351 - 18540416
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||||||||| ||| |||||||| ||  | ||  ||||||||||||||||||    
T  18540351 tcctcaaggtctcaggttcgattctctctggtgccaatttgagagggttaatttagcttcttcaaa 18540416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33727896 - 33727835
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    ||||||||||||||||||||||||||||  ||| ||| || | ||| |||||||||||||||    
T  33727896 tcctcaaggtctcaggttcgattccctctagtgtcaatttggatgggctaatttagcttctt 33727835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43292459 - 43292398
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    |||||||| |||||||||| |||| |||||||| ||| |||| || ||||||||||||||||    
T  43292459 tcctcaagatctcaggttcaattctctccggtgtcaatttagatgaactaatttagcttctt 43292398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23361672 - 23361617
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttag 56  Q
    ||||||||||||||||||| |||| ||| |||| ||| |||||||| |||||||||    
T  23361672 tcctcaaggtctcaggttcaattctctctggtgtcaatttaggtgggctaatttag 23361617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 35287769 - 35287824
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttag 56  Q
    |||||||||| ||| ||||||||| |||||||||||| || ||||||||| |||||    
T  35287769 tcctcaaggtatcatgttcgattctctccggtgccaatttgggtggactagtttag 35287824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 3305211 - 3305146
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||||||  |||||||  ||| |||||||| |||||||| |||||||| ||||| ||||    
T  3305211 tcctcaaggtctcaaattcgattatctctggtgccaatttaggtgggctaatttatcttctgcaaa 3305146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 3734770 - 3734725
Alignment:
Q  6 aaggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    ||||||||||||||||||||||| |||||||| || ||||| ||||    
T  3734770 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 3734725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 6953154 - 6953109
Alignment:
Q  6 aaggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    ||||||||||||||||||||||| |||||||| || ||||| ||||    
T  6953154 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 6953109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 11793544 - 11793479
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||| ||||| |||||   |||||||||| || ||||| ||| |||||||||||||||    
T  11793544 tcctcaaggtcttaggtttgattcttcccggtgccaatttgggtgggctagtttagcttcttcaaa 11793479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 16843813 - 16843753
Alignment:
Q  5 caaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||| ||||||||||||||| |||||||| ||| |||| ||| || ||||||||||||||||    
T  16843813 caagatctcaggttcgattctctccggtgtcaatttagatgggct-atttagcttcttcaaa 16843753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16852393 - 16852458
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| |||||||||||||||||| |    ||||||| |||||||| ||| |||||||||||||||    
T  16852393 tcctcgaggtctcaggttcgattctccttagtgccaatttaggtgggctattttagcttcttcaaa 16852458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18546385 - 18546320
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| |||||||||||||||||| | |||| | ||| |||||||   ||||||||||||||||||    
T  18546385 tcctcgaggtctcaggttcgattctcaccggcgtcaatttaggtgagataatttagcttcttcaaa 18546320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 35672536 - 35672483
Alignment:
Q  13 caggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||| ||||| |||||||| ||| || | |||||||||||||||||||||||    
T  35672536 caggtttgattctctccggtgtcaatttggatggactaatttagcttcttcaaa 35672483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 3058068 - 3058009
Alignment:
Q  5 caaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaa 65  Q
    |||||||||||||||||||| || ||| | ||| |||||||| || |||||||||||||||    
T  3058068 caaggtctcaggttcgattctcttcggcgtcaatttaggtgggct-atttagcttcttcaa 3058009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 4718700 - 4718744
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  4718700 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 4718744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 14633009 - 14633053
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  14633009 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 14633053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 15259552 - 15259508
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  15259552 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 15259508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 32879334 - 32879378
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  32879334 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 32879378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 33017267 - 33017303
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaa 37  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  33017267 tcctcaaggtctcaggttcgattctctctggtgccaa 33017303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 34237801 - 34237757
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  34237801 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 34237757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 39349311 - 39349355
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  39349311 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 39349355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 9e-22; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 6000556 - 6000479
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    ||||| |||| ||||||||||||||  ||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  6000556 ctaaatggactttttattacttatgggaccaaaccgatacttgaaatcaagttaagggaccaattgagcatttaagcc 6000479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 43392375 - 43392297
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcca 199  Q
    |||||||||||||||| || |||||  |||||||| |||||| |||||||||||| |||||||||||||||||||||||    
T  43392375 ctaaacggaccttttaatatttatgggaccaaaccaatacttgaaatcaagttaagggaccaattgagcatttaagcca 43392297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 4133127 - 4133204
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||||||| ||||||||||||||  | |||||| |||||| |||||||||||| ||||||||||||||||||||||    
T  4133127 ctaaacggacattttattacttatgagatcaaaccaatacttgaaatcaagttaagggaccaattgagcatttaagcc 4133204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21558181 - 21558246
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||||||||| ||| |||||||| ||||||||  ||||||||||||||||||    
T  21558181 tcctcaaggtctcaggttcgattctctctggtgccaatttaggtgggttaatttagcttcttcaaa 21558246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30579388 - 30579453
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||||||||  ||| |||||||| |||||||| |||||||||||||||||||    
T  30579388 tcctcaaggtctcaggttcgattttctctggtgccaatttaggtgggctaatttagcttcttcaaa 30579453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 41487412 - 41487477
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||||||||||||||||   |||||||||| |||||||| |||||||||||||||||||    
T  41487412 tcctcaaggtctcaggttcgattcttcccggtgccaatttaggtgggctaatttagcttcttcaaa 41487477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 119 - 198
Target Start/End: Complemental strand, 25731997 - 25731918
Alignment:
Q  119 atctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    |||||| | ||||||||||||||||||  || |||||||||||| |||||||||||| |||||||  |||||||||||||    
T  25731997 atctaagcagaccttttattacttatgggactaaaccgatacttgaaatcaagttaagggaccaaaagagcatttaagcc 25731918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 279977 - 279916
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    |||| |||||||||||||| |||| |||||||||||| || ||||| |||||||||||||||    
T  279977 tccttaaggtctcaggttcaattctctccggtgccaatttgggtgggctaatttagcttctt 279916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2446361 - 2446426
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| || ||||| ||||||||| |||||||||| | |||||||| |||||||||||||||||||    
T  2446361 tcctcgagatctcaagttcgattctctccggtgccgatttaggtgggctaatttagcttcttcaaa 2446426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 4572317 - 4572256
Alignment:
Q  4 tcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaa 65  Q
    ||||||||||||||||||||| |||||||| ||| || ||||| |||||||| |||||||||    
T  4572317 tcaaggtctcaggttcgattctctccggtgtcaatttgggtgggctaatttatcttcttcaa 4572256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 38374622 - 38374563
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttc 60  Q
    |||||||||||| ||||||||||| | |||||||||| |||||||| ||| |||||||||    
T  38374622 tcctcaaggtcttaggttcgattctccccggtgccaatttaggtgggctagtttagcttc 38374563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 5075995 - 5075935
Alignment:
Q  5 caaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||| ||||||||| |||| ||||||| ||||||||||| ||||| ||||||||||    
T  5075995 caaggtctcaagttcgattcactccagtgccaatttaggtggact-atttaacttcttcaaa 5075935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 15137606 - 15137671
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||| ||||| ||| |||| ||| || ||||| ||||||||| |||||||||    
T  15137606 tcctcaaggtctcaggttagattctctctggtgtcaatttgggtgggctaatttagtttcttcaaa 15137671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 17041035 - 17040970
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||||||||| |||  ||||||| || |||||   |||||||||||||||||    
T  17041035 tcctcaaggtctcaggttcgattctctcaagtgccaatttgggtgggtcaatttagcttcttcaaa 17040970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 27313757 - 27313692
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||| |||| |||||||| ||| | |||||| |||||||  |||||||||||||||||||    
T  27313757 tcctcaaggtttcagattcgattctctctgatgccaatttaggtgagctaatttagcttcttcaaa 27313692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 37691767 - 37691718
Alignment:
Q  126 cggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaa 175  Q
    ||||| |||||||||||||| || ||||||||||||| ||||||||||||    
T  37691767 cggactttttattacttatggaatcaaaccgatacttgaaatcaagttaa 37691718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41519287 - 41519223
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||||| ||| ||| | || ||| |||||||| |||||||||||||||||||    
T  41519287 tcctcaaggtctcaggttcgcttctctctg-tgtcaatttaggtgggctaatttagcttcttcaaa 41519223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 43590960 - 43591025
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||| |||||||||||||||| | |  ||||||| | |||||| |||||||||||||||||||    
T  43590960 tcctcaatgtctcaggttcgattctccctagtgccaattaaggtgggctaatttagcttcttcaaa 43591025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43663118 - 43663053
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| || |||||||||||| || |||||||  ||| || |||||||||||||||||||||||||    
T  43663118 tcctcgagatctcaggttcgaatctctccggtatcaatttgggtggactaatttagcttcttcaaa 43663053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 16833525 - 16833457
Alignment:
Q  128 gaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaag 196  Q
    |||||||||||||||||   |||||||| |||||| |||||||||||| ||| ||||| | ||||||||    
T  16833525 gaccttttattacttataggaccaaaccaatacttgaaatcaagttaagggatcaattaaacatttaag 16833457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 37117163 - 37117123
Alignment:
Q  15 ggttcgattccctccggtgccaacttaggtggactaattta 55  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  37117163 ggttcgattctctccggtgccaatttaggtggactaattta 37117123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 48983755 - 48983695
Alignment:
Q  2 cctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    |||||||||||||||||||||||||||  ||| ||| || ||||| |||||||| ||||||    
T  48983755 cctcaaggtctcaggttcgattccctctagtgtcaatttgggtgggctaatttaacttctt 48983695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3280508 - 3280446
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttca 64  Q
    ||||||||||||||  |||||||  | |||||||||| |||| |||||||||||||||||||||    
T  3280508 tcctcaaggtctcaa-ttcgattatccccggtgccaatttagatggactaatttagcttcttca 3280446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 5934180 - 5934235
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    |||| ||| ||||||||||||| |||| ||| |||||||||||||||||| |||||    
T  5934180 aggtttcatgttcgattccctctggtgtcaatttaggtggactaatttagtttctt 5934235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 6000737 - 6000812
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaag 196  Q
    |||||||||| |||||||||||||   ||||||| ||||||| |||| || |||| |||  |||||||||||||||    
T  6000737 ctaaacggactttttattacttataggaccaaactgatacttgaaattaaattaagggattaattgagcatttaag 6000812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 23330889 - 23330846
Alignment:
Q  3 ctcaaggtctcaggttcgattccctccggtgccaacttaggtgg 46  Q
    ||||||||||||||||||| ||||||||||||||| || |||||    
T  23330889 ctcaaggtctcaggttcgactccctccggtgccaatttcggtgg 23330846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 28647020 - 28647063
Alignment:
Q  3 ctcaaggtctcaggttcgattccctccggtgccaacttaggtgg 46  Q
    |||||||||||||||||||||||||| |||||||| || |||||    
T  28647020 ctcaaggtctcaggttcgattccctctggtgccaatttcggtgg 28647063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 33181231 - 33181172
Alignment:
Q  3 ctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    |||||| |||||||||||||||||||  ||| ||| || ||||| |||||||||||||||    
T  33181231 ctcaagatctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttctt 33181172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 41519131 - 41519072
Alignment:
Q  3 ctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    ||||||||||||| |||||||  |||||||| ||| || ||||| |||||||||||||||    
T  41519131 ctcaaggtctcagattcgattatctccggtgtcaatttgggtgggctaatttagcttctt 41519072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 7721422 - 7721484
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttc 63  Q
    |||||||||||||| ||||||||| ||| |||| ||| || | |||| |||||||||||||||    
T  7721422 tcctcaaggtctcatgttcgattctctctggtgtcaatttggatggaataatttagcttcttc 7721484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 18417506 - 18417584
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcca 199  Q
    ||||| ||||||||||||| ||||   | ||||||||||||| |||| ||||||| |||||||   |||||||||||||    
T  18417506 ctaaatggaccttttattatttataggatcaaaccgatacttgaaataaagttaagggaccaaaaaagcatttaagcca 18417584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 22035463 - 22035513
Alignment:
Q  13 caggttcgattccctccggtgccaacttaggtggactaatttagcttcttc 63  Q
    |||||||||||| |||| ||| ||| ||| |||||||||||||||||||||    
T  22035463 caggttcgattctctcctgtgtcaatttaagtggactaatttagcttcttc 22035513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 33460442 - 33460380
Alignment:
Q  4 tcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||| |||||||| | |||||| ||| ||| |||| ||| |||||||||||||||    
T  33460442 tcaaggtctcagattcgattctccccggtgtcaatttatgtgggctagtttagcttcttcaaa 33460380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 654851 - 654806
Alignment:
Q  6 aaggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    ||||||||||||||||||||||| |||||||| || ||||| ||||    
T  654851 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 654806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 2751325 - 2751370
Alignment:
Q  6 aaggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    ||||||||||||||||||||||| |||||||| || ||||| ||||    
T  2751325 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 2751370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2883003 - 2883067
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||||||||||| |||| ||| |||| ||| |||||||| || | ||||||||||||||    
T  2883003 tcctcaaggtctcaggttcaattctctctggtggcaatttaggtgggct-acttagcttcttcaaa 2883067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5273613 - 5273552
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    |||||||||||| ||||| ||||  |||||||||||| || ||||| ||| |||||||||||    
T  5273613 tcctcaaggtcttaggtttgattgtctccggtgccaatttgggtgggctagtttagcttctt 5273552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 5668594 - 5668529
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| |||||||||| ||||||| |||||| |  || ||| |||| |||||||||||||||||||    
T  5668594 tcctcgaggtctcaggatcgattctctccggagttaatttatgtgggctaatttagcttcttcaaa 5668529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 7309409 - 7309473
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| |||||||| ||||||||| ||||| || ||| ||| |||| |||||||||||||||||||    
T  7309409 tcctcgaggtctcaagttcgattctctccg-tgtcaatttaagtgggctaatttagcttcttcaaa 7309473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9183214 - 9183149
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||| |||||||||||||||  ||| |||| ||| || ||||| ||||||||| |||||||||    
T  9183214 tcctcaaagtctcaggttcgattatctctggtgtcaatttgggtgggctaatttagtttcttcaaa 9183149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 11720983 - 11720918
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||| ||||| |||| |||||||| | || ||||||| || ||||| |||||||||||||||||||    
T  11720983 tccttaaggtatcagattcgattctccccagtgccaatttgggtgggctaatttagcttcttcaaa 11720918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19553506 - 19553567
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    |||||||||||| |||||| |||| | ||||| |||| |||||||| ||| |||||||||||    
T  19553506 tcctcaaggtcttaggttcaattctccccggttccaatttaggtgggctactttagcttctt 19553567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29385766 - 29385701
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||| ||||| ||  |||||||| || ||||| ||| ||| |||||||||||    
T  29385766 tcctcaaggtctcaggtttgattctctttggtgccaatttgggtgggctacttttgcttcttcaaa 29385701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 45709731 - 45709670
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    ||||| |||||||||||||||||  ||||| | |||| |||||||| |||| ||||||||||    
T  45709731 tcctcgaggtctcaggttcgattatctccgataccaatttaggtgggctaacttagcttctt 45709670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 4132904 - 4132836
Alignment:
Q  129 accttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagc 197  Q
    |||||||||||||||||  || |  | |||| ||||||||||||||| ||||||||| | |||||||||    
T  4132904 accttttattacttatgagactagcctgataattaaaatcaagttaagggaccaattcaacatttaagc 4132836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 7176008 - 7175964
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  7176008 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 7175964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 7275332 - 7275376
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  7275332 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 7275376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 22119943 - 22119987
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  22119943 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 22119987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 26459433 - 26459397
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaa 37  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  26459433 tcctcaaggtctcaggttcgattctctctggtgccaa 26459397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 29861725 - 29861769
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  29861725 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 29861769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 32389733 - 32389809
Alignment:
Q  122 taaacggaccttttattacttatgtaaccaaaccgatacttaaaatc-aagttaatggaccaattgagcatttaagc 197  Q
    ||||| ||| |||||||||||||   ||||||| ||||||| ||||| |||| || ||||||||||| |||||||||    
T  32389733 taaacagacattttattacttattggaccaaactgatacttgaaatcaaagtcaaaggaccaattgaacatttaagc 32389809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 40543056 - 40543012
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  40543056 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 40543012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 45229035 - 45228983
Alignment:
Q  14 aggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||| |||| ||| ||| ||| |||| |||||||||||||||||||    
T  45229035 aggttcgattctctccagtgtcaatttaagtgggctaatttagcttcttcaaa 45228983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 112341 - 112396
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    |||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  112341 aggtctgaggttcgattctctccggtgccaatttaggtggactaatttagcttctt 112396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 15346 - 15280
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaag 67  Q
    ||||| |||||||||||||||||| ||| | |||||| |||||||| ||||||||||||||||||||    
T  15346 tcctcgaggtctcaggttcgattctctcggatgccaatttaggtgggctaatttagcttcttcaaag 15280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 1211471 - 1211397
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaa 195  Q
    |||||||||||||||||||| ||||  | ||||| ||||||| |||||||||||| ||| |||||||||||||||    
T  1211471 ctaaacggaccttttattacatatgggatcaaactgatacttcaaatcaagttaagggatcaattgagcatttaa 1211397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 1211683 - 1211748
Alignment:
Q  119 atctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaat 184  Q
    |||||||| || |||||||||||||||  ||||||| ||||||| |||||||||||| ||||||||    
T  1211683 atctaaacagatcttttattacttatgagaccaaacagatacttgaaatcaagttaagggaccaat 1211748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6385915 - 6385976
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    |||| ||||||||||||||||||| ||||||||| || || ||||| |||||||||||||||    
T  6385915 tccttaaggtctcaggttcgattctctccggtgctaatttgggtgggctaatttagcttctt 6385976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 8597770 - 8597705
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||| |||| |||| |||| ||||||| || ||||| |||||||||||||||||||    
T  8597770 tcctcaaggtctcaagttcaattctctccagtgccaatttgggtgggctaatttagcttcttcaaa 8597705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20213094 - 20213159
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||| ||||||||||||||||||||  ||| ||| || ||||| |||||||||||||||||||    
T  20213094 tcctcaatgtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttcaaa 20213159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22107117 - 22107182
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||| ||||||||||||||||||||  ||| ||| || ||||| |||||||||||||||||||    
T  22107117 tcctcaatgtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttcaaa 22107182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 18263899 - 18263958
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| |||||||||||| | || ||||||| |||||||| |||||||||||||||||||    
T  18263899 aggtcccaggttcgattctccccagtgccaatttaggtgggctaatttagcttcttcaaa 18263958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1056708 - 1056643
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||| | | ||||||||| ||| |||||||| ||||||||  ||||||||||||||||||    
T  1056708 tcctcaaggttttaagttcgattctctctggtgccaagttaggtgggttaatttagcttcttcaaa 1056643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14199970 - 14199909
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    ||||||||||||||| ||||||||| ||  ||| ||| || |||||||||||||||||||||    
T  14199970 tcctcaaggtctcagattcgattccttctagtgtcaatttgggtggactaatttagcttctt 14199909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24334048 - 24333987
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    ||||||||||||||||||| |||| | |||||||||| || ||||| ||| |||||||||||    
T  24334048 tcctcaaggtctcaggttcaattctcaccggtgccaatttgggtgggctagtttagcttctt 24333987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 31623014 - 31622949
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| |||||||||||| || || |||||||| ||| || ||||| |||||||||||||||||||    
T  31623014 tcctcgaggtctcaggtttgaatcactccggtgtcaatttgggtgggctaatttagcttcttcaaa 31622949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33549157 - 33549218
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    ||||| |||||||||||||||||| ||| | |||||| |||||||  |||||||||||||||    
T  33549157 tcctcgaggtctcaggttcgattctctcggatgccaatttaggtgagctaatttagcttctt 33549218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 30127459 - 30127518
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||||||||||  ||||||||||| |||||| |  |||||||||||| |||||    
T  30127459 aggtctcaggttcgattctttccggtgccaatttaggtaggttaatttagcttcctcaaa 30127518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 6691572 - 6691538
Alignment:
Q  3 ctcaaggtctcaggttcgattccctccggtgccaa 37  Q
    |||||||||||||||||||||| ||||||||||||    
T  6691572 ctcaaggtctcaggttcgattctctccggtgccaa 6691538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 14558022 - 14558079
Alignment:
Q  8 ggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||||||||| | |||||| ||| || ||||| |||||||||||||||||||    
T  14558022 ggtctcaggttcgattctc-ccggtgtcaatttgggtggtctaatttagcttcttcaaa 14558079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 32250866 - 32250812
Alignment:
Q  8 ggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    ||||||||||||||||| |||||||| ||| ||| ||||  ||||||||||||||    
T  32250866 ggtctcaggttcgattctctccggtgacaatttaagtgggttaatttagcttctt 32250812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10338197 - 10338132
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||||||||||| || ||| ||||||   ||  |||||||||||| ||||||    
T  10338197 tcctcaaggtctcaggttcgattccccccagtgtcaacttgattgagctaatttagcttattcaaa 10338132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 15360245 - 15360200
Alignment:
Q  6 aaggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    ||||||||||||||||||||||| |||||||| || ||||| ||||    
T  15360245 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 15360200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 23242039 - 23242104
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||| ||||| || ||| | |||||||||| || ||||| ||| |||||||||||||||    
T  23242039 tcctcaaggtcacaggtccggttctccccggtgccaatttgggtgggctagtttagcttcttcaaa 23242104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 654292 - 654248
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  654292 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 654248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 3222781 - 3222737
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  3222781 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 3222737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 6758444 - 6758380
Alignment:
Q  2 cctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||| |||||||| | ||||||| ||| |||| ||| |||||||| | |||||||||||||||||    
T  6758444 cctcgaggtctcaagatcgattctctctggtgtcaatttaggtgggcaaatttagcttcttcaaa 6758380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 12390476 - 12390520
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  12390476 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 12390520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28841467 - 28841527
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttct 61  Q
    |||||||||||||| ||||||||| |||||||| ||| |||| | | ||||||||| ||||    
T  28841467 tcctcaaggtctcaagttcgattctctccggtgtcaatttagattggctaatttagtttct 28841527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16773860 - 16773925
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| |||||||||||||||||| ||| | |||||| |||||||| |||||||||||||||||||    
T  16773860 tcctcgaggtctcaggttcgattctctctgatgccaatttaggtgggctaatttagcttcttcaaa 16773925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 21589349 - 21589406
Alignment:
Q  9 gtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  21589349 gtctcaggttcgattccctctggtgccaatttaggtgggctagtttagcttcttcaaa 21589406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 8417636 - 8417561
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaag 196  Q
    ||||||||| |||||||||||| ||  | ||||||||||||| |||||||||||| |||||||  |||||||||||    
T  8417636 ctaaacggaacttttattacttgtgagatcaaaccgatacttgaaatcaagttaagggaccaaaagagcatttaag 8417561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 30109325 - 30109267
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||||| ||||||| || |||||||| |||||||||||||||||||    
T  30109325 aggtctcaggttcgattccc-ccggtgctaatttaggtgggctaatttagcttcttcaaa 30109267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 9990024 - 9989959
Alignment:
Q  129 accttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaa 195  Q
    ||||||||||| ||||| | |||||||||| |||||||||||||||| ||||||||||| |||||||    
T  9990024 accttttattaattatgga-ccaaaccgattcttaaaatcaagttaagggaccaattgaacatttaa 9989959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 17028287 - 17028225
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttc 63  Q
    |||||||||||||||||| |||||||||  ||| ||| |||||||| ||||||||||||||||    
T  17028287 tcctcaaggtctcaggtttgattccctctagtgtcaatttaggtgggctaatttagcttcttc 17028225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12877746 - 12877811
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||| |||||||||||||||| ||| ||| | || |||||||| |||||||||||||||||||    
T  12877746 tcctcaatgtctcaggttcgattctctctggtactaatttaggtgggctaatttagcttcttcaaa 12877811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 18968586 - 18968509
Alignment:
Q  121 ctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcc 198  Q
    ||||||||| ||||||||  ||||| ||||||||| |||||| |||||||||||| |||  |||| ||||||||||||    
T  18968586 ctaaacggatcttttattgattatgaaaccaaaccaatacttgaaatcaagttaagggattaatttagcatttaagcc 18968509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 35705042 - 35705103
Alignment:
Q  4 tcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaa 65  Q
    ||||||||||||||||||||| | |||||| ||| || ||||| ||||||||||||||||||    
T  35705042 tcaaggtctcaggttcgattctccccggtgtcaatttgggtgggctaatttagcttcttcaa 35705103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 3315268 - 3315326
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagctt 59  Q
    |||||||||||||||||||||||| | | |||||||| ||||| ||| |||||||||||    
T  3315268 tcctcaaggtctcaggttcgattctcccaggtgccaatttaggcggattaatttagctt 3315326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 18968800 - 18968866
Alignment:
Q  129 accttttattacttatgtaaccaaaccgatacttaaaatcaagttaatggaccaattgagcatttaa 195  Q
    ||||||||||| |||||  | ||||||||||||| |||||||||||| | | |||||||||||||||    
T  18968800 accttttattatttatgggatcaaaccgatacttgaaatcaagttaaggaatcaattgagcatttaa 18968866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 84877 - 84942
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||| ||||||||| | |||||||||   | ||||| |||||||||||||||||||    
T  84877 tcctcaaggtctcaagttcgattctccccggtgccattatgggtgggctaatttagcttcttcaaa 84942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29075834 - 29075899
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| || ||||| ||||||||| ||| |||||||| |||| ||| |||||||||||||||||||    
T  29075834 tcctcgagatctcatgttcgattctctctggtgccaatttagatgggctaatttagcttcttcaaa 29075899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29692409 - 29692344
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||| ||||||||||  |||| ||||| |||||| || ||||||||||||||| |||||||||    
T  29692409 tcctcaaagtctcaggtttaattctctccgatgccaatttgggtggactaatttagtttcttcaaa 29692344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 10054109 - 10054165
Alignment:
Q  10 tctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||||||||||| ||||| |  |||||| ||||| |||||||||||||||||||    
T  10054109 tctcaggttcgattctctccgatatcaacttgggtgggctaatttagcttcttcaaa 10054165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 18207258 - 18207302
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    ||||||||||||||||||||||||||||||| || ||||| ||||    
T  18207258 aggtctcaggttcgattccctccggtgccaatttcggtgggctaa 18207302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 4793091 - 4793042
Alignment:
Q  13 caggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    |||||||||||| | || ||||||| |||||||| |||||||||||||||    
T  4793091 caggttcgattctccccagtgccaatttaggtgggctaatttagcttctt 4793042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 6844782 - 6844847
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| |||||| ||||||||||  |||  ||||||| ||||||||| || |||||||||||||||    
T  6844782 tcctcgaggtctaaggttcgattatctctcgtgccaatttaggtggattagtttagcttcttcaaa 6844847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 8278298 - 8278233
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||| || ||||| ||| ||||  |||||||||| | |||||||| |||||||||||||||||||    
T  8278298 tcctcgagatctcaagtttgattatctccggtgccgatttaggtgggctaatttagcttcttcaaa 8278233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 22737143 - 22737200
Alignment:
Q  9 gtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||||| | |  ||| ||||||||  ||||||||||||||||||    
T  22737143 gtctcaggttcgattccctctgatatcaatttaggtgggttaatttagcttcttcaaa 22737200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29173543 - 29173604
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    ||||| |||| ||||||||||||  ||| |||| ||| |||||||| |||||||||||||||    
T  29173543 tcctcgaggtttcaggttcgattatctctggtgtcaatttaggtgggctaatttagcttctt 29173604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31074285 - 31074346
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    |||||||| ||||||||||||||| ||| |||||||| ||| | ||| || |||||||||||    
T  31074285 tcctcaagatctcaggttcgattctctctggtgccaatttaagaggattagtttagcttctt 31074346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 35360109 - 35360048
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    ||||| |||||||||||||||||| | |||||||||| |||||||  | | |||||||||||    
T  35360109 tcctcgaggtctcaggttcgattctcaccggtgccaatttaggtgagcgagtttagcttctt 35360048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 43442249 - 43442314
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||||||||||| ||| | || ||| || | ||| ||||||||| |||||||||    
T  43442249 tcctcaaggtctcaggttcgattctctctgttgtcaatttggatgggctaatttagtttcttcaaa 43442314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 14285214 - 14285250
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaa 37  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  14285214 tcctcaaggtctcaggttcgattctctctggtgccaa 14285250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 27498877 - 27498833
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  27498877 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 27498833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 34310193 - 34310237
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  34310193 aggtctcaggttcgattccctctggtgccaattttggtgggctaa 34310237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 37495098 - 37495142
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  37495098 aggtctcaggttcgattccctctggtgccaattttggtgggctaa 37495142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 38684259 - 38684303
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  38684259 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 38684303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 233612 - 233556
Alignment:
Q  119 atctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaa 175  Q
    ||||||||||| ||||||||||||||  ||| |||||||||||| ||||||||||||    
T  233612 atctaaacggatcttttattacttatagaactaaaccgatacttgaaatcaagttaa 233556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 233720 - 233780
Alignment:
Q  119 atctaaacggaccttttattacttatgtaaccaaaccgatacttaaaatcaagttaatgga 179  Q
    ||||||||||| ||||||||||||||| |||||||||||   || ||||||||||||||||    
T  233720 atctaaacggatcttttattacttatggaaccaaaccgaagattgaaatcaagttaatgga 233780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 4406 - 4458
Alignment:
Q  14 aggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||||||||  ||| ||| || |||||||||||||||||||||||||    
T  4406 aggttcgattccctctagtgtcaatttgggtggactaatttagcttcttcaaa 4458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 163027 - 162967
Alignment:
Q  6 aaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    ||||||| ||||||||||| |||||||| ||| |||| |||||||| ||| ||||||||||    
T  163027 aaggtctgaggttcgattctctccggtgtcaatttagatggactaacttaacttcttcaaa 162967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18352 - 18416
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttcttcaaa 66  Q
    |||||||||| ||||||| ||||| ||| |||||||| ||  |||| |||||||||||||||||||    
T  18352 tcctcaaggtttcaggtttgattctctctggtgccaatttgagtgg-ctaatttagcttcttcaaa 18416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 5229 - 5184
Alignment:
Q  6 aaggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    ||||||||||||||||||||||| |||||||| || ||||| ||||    
T  5229 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 5184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 7452 - 7411
Alignment:
Q  10 tctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||||||||| || ||||| ||||    
T  7452 tctcaggttcgattccctccggtgccaatttcggtgggctaa 7411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 15800 - 15739
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaacttaggtggactaatttagcttctt 62  Q
    |||||||||||||| ||| ||||| |  ||||||||| || ||||| |||||||||||||||    
T  15800 tcctcaaggtctcaagtttgattctccgcggtgccaatttgggtgggctaatttagcttctt 15739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 25361 - 25312
Alignment:
Q  150 caaaccgatacttaaaatcaagttaatggaccaattgagcatttaagcca 199  Q
    |||||||| |||| |||||||||||| ||||| ||||| |||||||||||    
T  25361 caaaccgaaacttgaaatcaagttaagggaccgattgaacatttaagcca 25312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 97513 - 97468
Alignment:
Q  6 aaggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    ||||||||||||||||||||||| |||||||| || ||||| ||||    
T  97513 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 97468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2734 - 2698
Alignment:
Q  1 tcctcaaggtctcaggttcgattccctccggtgccaa 37  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  2734 tcctcaaggtctcaggttcgattctctctggtgccaa 2698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 40376 - 40420
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  40376 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 40420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 161860 - 161904
Alignment:
Q  7 aggtctcaggttcgattccctccggtgccaacttaggtggactaa 51  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||    
T  161860 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 161904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University