View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21568_low_4 (Length: 436)

Name: NF21568_low_4
Description: NF21568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21568_low_4
NF21568_low_4
[»] chr6 (21 HSPs)
chr6 (217-435)||(26216222-26216440)
chr6 (1-142)||(26216006-26216147)
chr6 (11-85)||(9224051-9224125)
chr6 (1-109)||(26534702-26534815)
chr6 (1-131)||(32935326-32935457)
chr6 (1-109)||(21266098-21266207)
chr6 (10-131)||(20701799-20701921)
chr6 (9-114)||(12794094-12794201)
chr6 (40-97)||(34105410-34105468)
chr6 (1-78)||(21265003-21265080)
chr6 (37-80)||(3117508-3117551)
chr6 (37-107)||(16510324-16510395)
chr6 (54-110)||(3880623-3880680)
chr6 (8-84)||(33968606-33968683)
chr6 (40-84)||(34090374-34090418)
chr6 (12-79)||(13423482-13423549)
chr6 (49-84)||(7546464-7546499)
chr6 (49-103)||(20499910-20499965)
chr6 (1-85)||(15944029-15944114)
chr6 (48-84)||(12129228-12129264)
chr6 (52-84)||(34092806-34092838)
[»] chr8 (27 HSPs)
chr8 (1-124)||(32945690-32945814)
chr8 (9-131)||(30236123-30236246)
chr8 (14-85)||(15906696-15906767)
chr8 (1-126)||(17720693-17720818)
chr8 (3-99)||(10552263-10552360)
chr8 (2-114)||(35062437-35062550)
chr8 (37-107)||(15821402-15821473)
chr8 (10-85)||(17656998-17657073)
chr8 (37-84)||(24995418-24995465)
chr8 (37-84)||(31207385-31207432)
chr8 (37-131)||(9519462-9519557)
chr8 (37-107)||(36630824-36630895)
chr8 (37-84)||(32066318-32066365)
chr8 (37-84)||(34389028-34389075)
chr8 (37-84)||(37986881-37986928)
chr8 (3-78)||(41791253-41791328)
chr8 (37-84)||(41893423-41893470)
chr8 (37-75)||(16457484-16457522)
chr8 (19-80)||(10248558-10248619)
chr8 (46-85)||(40531242-40531281)
chr8 (46-84)||(33967337-33967375)
chr8 (9-85)||(12198064-12198140)
chr8 (9-85)||(12442492-12442568)
chr8 (40-84)||(12898300-12898344)
chr8 (37-73)||(20138448-20138484)
chr8 (40-85)||(23264716-23264761)
chr8 (47-80)||(36796621-36796654)
[»] chr5 (24 HSPs)
chr5 (2-131)||(31721640-31721770)
chr5 (1-84)||(8730928-8731012)
chr5 (10-131)||(13954230-13954351)
chr5 (1-107)||(39184172-39184281)
chr5 (37-107)||(7392054-7392125)
chr5 (1-85)||(22675311-22675395)
chr5 (5-85)||(23426354-23426434)
chr5 (37-85)||(34378108-34378156)
chr5 (10-131)||(33258878-33259000)
chr5 (37-85)||(7195262-7195310)
chr5 (1-85)||(27713079-27713163)
chr5 (10-107)||(8297455-8297553)
chr5 (10-80)||(21402833-21402903)
chr5 (10-105)||(14302426-14302522)
chr5 (1-107)||(24072254-24072360)
chr5 (42-97)||(12046252-12046308)
chr5 (37-85)||(25992017-25992065)
chr5 (16-107)||(39024452-39024544)
chr5 (10-85)||(26045960-26046035)
chr5 (43-84)||(698372-698413)
chr5 (30-126)||(17854083-17854180)
chr5 (37-78)||(18593260-18593301)
chr5 (37-85)||(29087491-29087539)
chr5 (52-84)||(25341709-25341741)
[»] chr1 (32 HSPs)
chr1 (9-132)||(17033548-17033673)
chr1 (2-131)||(4651743-4651872)
chr1 (42-131)||(46814495-46814585)
chr1 (1-85)||(38544724-38544809)
chr1 (10-107)||(6583212-6583310)
chr1 (10-76)||(27102210-27102276)
chr1 (43-107)||(7857640-7857705)
chr1 (1-132)||(19598598-19598730)
chr1 (37-107)||(9313312-9313383)
chr1 (37-107)||(24658916-24658987)
chr1 (37-131)||(27031863-27031958)
chr1 (37-84)||(31585783-31585830)
chr1 (37-84)||(41920463-41920510)
chr1 (12-84)||(46692817-46692889)
chr1 (37-107)||(24684501-24684572)
chr1 (1-83)||(42374175-42374258)
chr1 (43-84)||(5459172-5459213)
chr1 (40-96)||(15840938-15840995)
chr1 (12-76)||(5389419-5389483)
chr1 (40-107)||(34774858-34774925)
chr1 (37-84)||(30685927-30685974)
chr1 (1-131)||(50589194-50589325)
chr1 (10-107)||(32864557-32864655)
chr1 (40-84)||(30655571-30655615)
chr1 (37-80)||(24449953-24449996)
chr1 (14-85)||(27905422-27905493)
chr1 (25-84)||(46603403-46603462)
chr1 (10-79)||(10785455-10785524)
chr1 (46-84)||(38564912-38564950)
chr1 (9-86)||(16147564-16147641)
chr1 (41-82)||(42374049-42374090)
chr1 (40-84)||(33034672-33034716)
[»] chr7 (39 HSPs)
chr7 (2-131)||(38485519-38485648)
chr7 (1-84)||(11379113-11379197)
chr7 (37-130)||(6584873-6584967)
chr7 (9-131)||(46133272-46133396)
chr7 (1-84)||(13311850-13311933)
chr7 (1-109)||(12480871-12480981)
chr7 (1-107)||(3478339-3478446)
chr7 (1-84)||(9428092-9428175)
chr7 (10-107)||(24324793-24324892)
chr7 (10-107)||(6716732-6716830)
chr7 (10-107)||(8745140-8745238)
chr7 (12-85)||(9349759-9349832)
chr7 (10-85)||(1320804-1320880)
chr7 (37-106)||(34389950-34390020)
chr7 (37-82)||(10244195-10244240)
chr7 (10-116)||(16954631-16954739)
chr7 (1-132)||(47457009-47457141)
chr7 (10-107)||(16828931-16829030)
chr7 (37-84)||(38306272-38306319)
chr7 (43-107)||(42533281-42533346)
chr7 (37-85)||(33435119-33435167)
chr7 (46-84)||(46262151-46262189)
chr7 (37-85)||(3419679-3419727)
chr7 (37-85)||(41089771-41089819)
chr7 (1-85)||(48058641-48058725)
chr7 (37-80)||(3867131-3867174)
chr7 (37-80)||(37795004-37795047)
chr7 (37-84)||(47325908-47325955)
chr7 (49-83)||(17802851-17802885)
chr7 (46-84)||(27993568-27993606)
chr7 (46-84)||(35206725-35206763)
chr7 (58-107)||(44755613-44755663)
chr7 (43-107)||(25160802-25160867)
chr7 (9-85)||(23983205-23983281)
chr7 (37-73)||(44353587-44353623)
chr7 (37-84)||(5860311-5860358)
chr7 (50-84)||(25153231-25153265)
chr7 (43-85)||(35745856-35745898)
chr7 (36-103)||(26386197-26386265)
[»] chr2 (38 HSPs)
chr2 (1-85)||(22885120-22885204)
chr2 (1-85)||(15126397-15126481)
chr2 (1-85)||(16959992-16960076)
chr2 (1-84)||(25504895-25504979)
chr2 (1-85)||(33788619-33788703)
chr2 (2-124)||(18681035-18681158)
chr2 (10-107)||(1269470-1269568)
chr2 (1-83)||(2062901-2062983)
chr2 (2-131)||(31902402-31902532)
chr2 (1-84)||(4471934-4472017)
chr2 (10-107)||(14106520-14106618)
chr2 (37-107)||(7874278-7874349)
chr2 (11-97)||(14405195-14405282)
chr2 (1-85)||(10173564-10173649)
chr2 (1-85)||(27739985-27740069)
chr2 (37-84)||(39338888-39338935)
chr2 (6-107)||(37770633-37770735)
chr2 (43-84)||(10524108-10524149)
chr2 (37-107)||(13337261-13337332)
chr2 (46-84)||(4162052-4162090)
chr2 (1-73)||(3745356-3745429)
chr2 (37-85)||(387183-387231)
chr2 (37-84)||(23650396-23650443)
chr2 (10-77)||(34230219-34230286)
chr2 (11-73)||(7695985-7696047)
chr2 (1-74)||(16952369-16952443)
chr2 (1-74)||(17023034-17023108)
chr2 (1-74)||(17060340-17060414)
chr2 (1-74)||(17079190-17079264)
chr2 (19-131)||(29487094-29487206)
chr2 (30-85)||(5254266-5254321)
chr2 (46-85)||(9560820-9560859)
chr2 (49-84)||(23665439-23665474)
chr2 (1-74)||(27880117-27880189)
chr2 (43-84)||(36276200-36276241)
chr2 (51-107)||(41086825-41086882)
chr2 (37-107)||(17105398-17105470)
chr2 (40-84)||(34143079-34143123)
[»] chr4 (38 HSPs)
chr4 (1-131)||(35800453-35800583)
chr4 (10-131)||(53823417-53823539)
chr4 (1-132)||(38929789-38929921)
chr4 (1-107)||(46698771-46698879)
chr4 (10-131)||(25753135-25753257)
chr4 (11-107)||(2061735-2061832)
chr4 (1-124)||(12296145-12296269)
chr4 (9-107)||(16501718-16501817)
chr4 (10-81)||(39421009-39421080)
chr4 (10-106)||(22811156-22811253)
chr4 (32-107)||(31050680-31050756)
chr4 (37-131)||(4305688-4305783)
chr4 (40-107)||(19311369-19311435)
chr4 (10-104)||(49747517-49747612)
chr4 (30-84)||(21387220-21387274)
chr4 (40-84)||(39041300-39041344)
chr4 (2-84)||(6599932-6600015)
chr4 (37-84)||(38637255-38637302)
chr4 (37-126)||(19815247-19815337)
chr4 (9-83)||(24740098-24740172)
chr4 (11-85)||(28966877-28966951)
chr4 (46-84)||(40813813-40813851)
chr4 (37-85)||(8255037-8255085)
chr4 (37-85)||(8268455-8268503)
chr4 (49-85)||(53756766-53756802)
chr4 (41-84)||(36962642-36962685)
chr4 (10-84)||(41117963-41118037)
chr4 (47-107)||(2825770-2825831)
chr4 (37-78)||(30167587-30167628)
chr4 (37-82)||(30964454-30964499)
chr4 (51-84)||(37707392-37707425)
chr4 (10-110)||(48098317-48098418)
chr4 (40-84)||(2792300-2792344)
chr4 (40-80)||(26474851-26474891)
chr4 (1-107)||(19673088-19673194)
chr4 (46-84)||(10388572-10388610)
chr4 (45-82)||(12296061-12296098)
chr4 (46-78)||(17416541-17416573)
[»] scaffold0200 (1 HSPs)
scaffold0200 (10-107)||(19370-19468)
[»] chr3 (33 HSPs)
chr3 (3-131)||(30935379-30935508)
chr3 (1-102)||(1652873-1652975)
chr3 (1-84)||(5556581-5556665)
chr3 (1-132)||(47945667-47945800)
chr3 (10-107)||(14879422-14879521)
chr3 (37-107)||(19176489-19176560)
chr3 (10-80)||(37123397-37123467)
chr3 (37-84)||(17550968-17551015)
chr3 (10-107)||(14193927-14194027)
chr3 (32-85)||(14755283-14755336)
chr3 (43-107)||(34475783-34475848)
chr3 (11-80)||(39021273-39021342)
chr3 (37-85)||(43012385-43012433)
chr3 (37-107)||(9584076-9584147)
chr3 (37-86)||(33143972-33144021)
chr3 (46-85)||(20710740-20710779)
chr3 (1-131)||(25594507-25594638)
chr3 (37-107)||(45398783-45398854)
chr3 (38-84)||(30127273-30127319)
chr3 (1-77)||(823421-823498)
chr3 (44-85)||(40023602-40023643)
chr3 (37-77)||(20611801-20611841)
chr3 (40-84)||(24099353-24099397)
chr3 (10-107)||(25647671-25647771)
chr3 (45-107)||(23328381-23328444)
chr3 (1-85)||(27398968-27399053)
chr3 (37-81)||(2392529-2392573)
chr3 (37-81)||(2394276-2394320)
chr3 (41-84)||(31424247-31424290)
chr3 (40-78)||(45163872-45163910)
chr3 (47-84)||(31482895-31482932)
chr3 (40-84)||(2782095-2782139)
chr3 (40-84)||(19295891-19295935)
[»] scaffold0119 (1 HSPs)
scaffold0119 (10-107)||(42134-42232)
[»] scaffold1613 (1 HSPs)
scaffold1613 (1-85)||(1003-1088)
[»] scaffold0050 (1 HSPs)
scaffold0050 (37-107)||(36694-36765)
[»] scaffold0620 (2 HSPs)
scaffold0620 (40-84)||(3841-3885)
scaffold0620 (52-84)||(8140-8172)
[»] scaffold0063 (1 HSPs)
scaffold0063 (10-107)||(58114-58212)
[»] scaffold0068 (1 HSPs)
scaffold0068 (43-84)||(35800-35841)


Alignment Details
Target: chr6 (Bit Score: 211; Significance: 1e-115; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 217 - 435
Target Start/End: Original strand, 26216222 - 26216440
Alignment:
Q  217 agctagcgacaactagaccatatattccttaaggaccaacaaattagggaagaattttttaaagtcgtcacaaccaaagactaatcattctccaaccaaa 316  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26216222 agctagcgacaactagaccatgtattccttaaggaccaacaaattagggaagaattttttaaagtcgtcacaaccaaagattaatcattctccaaccaaa 26216321  T
Q  317 ggtttggccaattattttgacgatccatctcaattgctctcatcacaccagatagatagctctgccatgcaagctgatccctgagcaagattattatcaa 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26216322 ggtttggccaattattttgacgatccatctcaattgctctcatcacaccagatagatagctctgccatgcaagctgatccctgagcaagattattatcaa 26216421  T
Q  417 agatgagcattgctatcag 435  Q
    |||||||||||||||||||    
T  26216422 agatgagcattgctatcag 26216440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 26216006 - 26216147
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagacttagaatcaaatcagaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26216006 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagacttagaatcaaatcagaa 26216105  T
Q  101 gggcacctcttacctccggtccaccatagaattacggtggag 142  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  26216106 gggcacctcttacctccggtccatcatagaattacggtggag 26216147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 9224125 - 9224051
Alignment:
Q  11 aaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||    
T  9224125 aaaagcccaaaaccaaaactgaaccaaagaactgactcccgatctcgaatcaaaagcgatcagcccaccagactt 9224051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 26534702 - 26534815
Alignment:
Q  1 agaacacc-aaaaaagcccaaaaccaaaactgaacc---gaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaat 95  Q
    |||||||| |||||||||||||||||||  ||||||   ||||||||||||||| |||||||||||||||||||||||||||||||||| || | |||||    
T  26534702 agaacacctaaaaaagcccaaaaccaaacttgaaccaaagaagaactgactcccaatctcgaatcaaaagtgatcggcccaccagacttcaggaccaaat 26534801  T
Q  96 cagaagggcacctc 109  Q
    ||||||| ||||||    
T  26534802 cagaaggccacctc 26534815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 32935326 - 32935457
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcaga 99  Q
    ||||||| ||||||| |||||| ||||  |||  | |||||||||||||||||||||||||||||| |||||||||||||||||| || | |||||||||    
T  32935326 agaacactaaaaaagtccaaaatcaaacttgagtccaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcaggaccaaatcaga 32935425  T
Q  100 agggcacctcttacctccggtccaccatagaa 131  Q
    |||| ||| || ||| ||| |||| |||||||    
T  32935426 agggaacccctcacccccgatccatcatagaa 32935457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 21266207 - 21266098
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcaga 99  Q
    |||||||||| ||||||||||||||||  ||||||  | |||| |||||||||||||||||||||| |||||||||||||| | |||| | ||||||| |    
T  21266207 agaacaccaacaaagcccaaaaccaaacttgaaccacataactaactcccgatctcgaatcaaaagcgatcggcccaccagtctttaggaccaaatcata 21266108  T
Q  100 agggcacctc 109  Q
    ||| ||||||    
T  21266107 aggccacctc 21266098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 20701799 - 20701921
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact-tagaatcaaatcagaagggcacct 108  Q
    ||||||||||||||||||  | | || ||||||| |||||||||||||||||||||||||||||| |||||| ||  |  | |||||||||||||||||     
T  20701799 aaaaagcccaaaaccaaacttaagccaaagaactaactcccgatctcgaatcaaaagtgatcggcacaccagtctaaatgaccaaatcagaagggcaccc 20701898  T
Q  109 cttacctccggtccaccatagaa 131  Q
    || ||| ||||| ||||| ||||    
T  20701899 ctcacccccggtacaccagagaa 20701921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 12794201 - 12794094
Alignment:
Q  9 aaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaag-tgatcggcccaccagac-ttagaatcaaatcagaagggcac 106  Q
    ||||||||| ||||| |||  || ||| ||||||||||||| |||||||||||||||| |||||||||||| |||| |||||| |||| ||||||| |||    
T  12794201 aaaaaagccaaaaactaaacttggacccaagaactgactcctgatctcgaatcaaaagttgatcggcccactagactttagaaccaaaacagaaggacac 12794102  T
Q  107 ctcttacc 114  Q
    | ||||||    
T  12794101 cccttacc 12794094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 34105468 - 34105410
Alignment:
Q  40 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact-tagaatcaaatca 97  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||    
T  34105468 aactgactcccgatctcgaatcaaaagtgatcggcccaccaaactctagaaacaaatca 34105410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21265080 - 21265003
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccac 78  Q
    |||||||||| ||||||||||||||||  ||||||  | |||| ||||||||||||||||||||||  ||||||||||    
T  21265080 agaacaccaacaaagcccaaaaccaaacttgaaccagataactaactcccgatctcgaatcaaaagctatcggcccac 21265003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 3117551 - 3117508
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccacca 80  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  3117551 aagaactgactcccgatcttgaatcaaaagtgatcggcccacca 3117508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 16510324 - 16510395
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    |||||||||||| | ||||||||||||||||||||||||||| |||| |||||| ||||| || ||||||||    
T  16510324 aagaactgactctcaatctcgaatcaaaagtgatcggcccactagactttagaaccaaattagcagggcacc 16510395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 3880623 - 3880680
Alignment:
Q  54 ctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacctct 110  Q
    ||||||||||||||||||||||||||| || |||| | ||||||||||||||||||||    
T  3880623 ctcgaatcaaaagtgatcggcccaccaaactttaggaccaaatcagaagggcacctct 3880680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 33968606 - 33968683
Alignment:
Q  8 caaaaaagcccaaaaccaaaact-gaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||  |||||| ||||||| ||||| |||||||||||||||||||||||||||||| ||||  ||||| |||||    
T  33968606 caaaaaaatccaaaatcaaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatctacccactagact 33968683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 34090418 - 34090374
Alignment:
Q  40 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||||||||||||||||||| |||||| |||||||||||    
T  34090418 aactgactcccgatctcgaatcaaaattgatcgacccaccagact 34090374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 13423549 - 13423482
Alignment:
Q  12 aaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccacc 79  Q
    |||||||| |||||||  ||| || |||||| ||||| |||||||||||||||||||||||| |||||    
T  13423549 aaagcccataaccaaacttgagccaaagaaccgactctcgatctcgaatcaaaagtgatcggtccacc 13423482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 84
Target Start/End: Original strand, 7546464 - 7546499
Alignment:
Q  49 ccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||||||||||||||||||| ||||||||||    
T  7546464 ccgatctcgaatcaaaagtgatcggtccaccagact 7546499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 20499965 - 20499910
Alignment:
Q  49 ccgatctcgaatcaaaagtgatcggcccaccagact-tagaatcaaatcagaaggg 103  Q
    |||||||||||||||||| |||||| |||||| |||  ||||||||||||||||||    
T  20499965 ccgatctcgaatcaaaagcgatcggtccaccatactccagaatcaaatcagaaggg 20499910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 15944114 - 15944029
Alignment:
Q  1 agaacaccaaaaaagcccaaaac-caaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||| ||| |||||||||||||  ||| | |||||| | ||||||||||| || ||| ||||||||||||||||| ||||| ||||    
T  15944114 agaaaacctaaaaagcccaaaaaacaagattgaaccaaggaactgactccagaactctaatcaaaagtgatcggctcaccaaactt 15944029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 12129264 - 12129228
Alignment:
Q  48 cccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  12129264 cccgatctcgaatcaaaagtgatcggaccatcagact 12129228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 34092838 - 34092806
Alignment:
Q  52 atctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||||||||||||||||| |||||||||    
T  34092838 atctcgaatcaaaagtgatcggctcaccagact 34092806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 32945690 - 32945814
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcaga 99  Q
    |||||| ||||||||||||||||||||  |||| | ||||| ||||||||||||||||||||||||||||| |||||| | |||| ||||||||||||||    
T  32945690 agaacatcaaaaaagcccaaaaccaaacttgaatcaaagaattgactcccgatctcgaatcaaaagtgatcagcccactatacttcagaatcaaatcaga 32945789  T
Q  100 agggcacctcttacctccggtccac 124  Q
    || ||||||||||||||||||||||    
T  32945790 agagcacctcttacctccggtccac 32945814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 9 - 131
Target Start/End: Original strand, 30236123 - 30236246
Alignment:
Q  9 aaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcagaagggcacc 107  Q
    |||||||||||||||||||  |||||| |||||||||||||||||||||||||||||| ||||| |||||||||||| | || |||||||||||||||||    
T  30236123 aaaaaagcccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgtcccaccagacttcaaaaccaaatcagaagggcacc 30236222  T
Q  108 tcttacctccggtccaccatagaa 131  Q
     |||||| ||||||||||| ||||    
T  30236223 ccttacccccggtccaccagagaa 30236246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 15906767 - 15906696
Alignment:
Q  14 agcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    ||||||||||||||  |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15906767 agcccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaatgtgatcggcccaccagactt 15906696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 17720693 - 17720818
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcaga 99  Q
    |||||||||||| ||||||||||| ||| |||||| |||||||||||||||||| ||||||||||| |||| |||||||| || |||| | |||| ||||    
T  17720693 agaacaccaaaacagcccaaaacctaaattgaaccaaagaactgactcccgatc-cgaatcaaaagcgatcagcccaccatactttaggaccaaaccaga 17720791  T
Q  100 agggcacctcttacctccggtccacca 126  Q
      |||||| |||||| | |||||||||    
T  17720792 caggcaccccttacccctggtccacca 17720818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 10552360 - 10552263
Alignment:
Q  3 aacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcaga 99  Q
    |||||| ||||||| ||||||||||   |||||  |||||||||||||||||| |||||||||| |||||||||||||||||| |||| |||||||||    
T  10552360 aacacctaaaaagcacaaaaccaaactagaaccagagaactgactcccgatctagaatcaaaagcgatcggcccaccagacttcagaaccaaatcaga 10552263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 35062550 - 35062437
Alignment:
Q  2 gaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcagaa 100  Q
    ||||||| ||||||||||||||||||   ||||   ||||||||||| ||||||||||||||||  |||||||||||||||||| |||| |||||||||     
T  35062550 gaacacctaaaaagcccaaaaccaaactagaacaagagaactgactctcgatctcgaatcaaaatcgatcggcccaccagacttcagaaccaaatcagag 35062451  T
Q  101 gggcacctcttacc 114  Q
     |||||| ||||||    
T  35062450 aggcaccccttacc 35062437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 15821402 - 15821473
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||| ||||||||    
T  15821402 aagagctgactcccgatctcgaatcaaaagtgatcagcccaccagactttagaaccaaatcagcagggcacc 15821473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 17656998 - 17657073
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||| |||||||||||  ||| || |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  17656998 aaaaagtccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcgacccaccatactt 17657073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 24995418 - 24995465
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24995418 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 24995465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 31207385 - 31207432
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31207385 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 31207432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 37 - 131
Target Start/End: Complemental strand, 9519557 - 9519462
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact-tagaatcaaatcagaagggcacctcttacctccggtccaccatagaa 131  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||| ||| | ||||| || |||||||| || ||| ||||| ||||| ||||    
T  9519557 aagaactgactcccgatctcgaatcaaaactgatcggcccactagactatagtaccaaattagcagggcacccctcacccccggtacaccagagaa 9519462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 36630895 - 36630824
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||| || ||||||||    
T  36630895 aagaactgacacccgatctcgaattaaaagtgatcggcccaccagactttagaaccaaattagcagggcacc 36630824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 32066318 - 32066365
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||    
T  32066318 aagagctgactcccgatttcgaatcaaaagtgatcggcccaccagact 32066365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 34389028 - 34389075
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||    
T  34389028 aagaactgactcttgatctcgaatcaaaagtgatcggcccaccagact 34389075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 37986881 - 37986928
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  37986881 aagaactgactcccgatctcgaatcaaaaatgattggcccaccagact 37986928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 41791253 - 41791328
Alignment:
Q  3 aacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccac 78  Q
    ||||||||||||| ||||||| |||  |||||| ||||| |||||| ||||||||||||||||| ||||| |||||    
T  41791253 aacaccaaaaaagtccaaaactaaacttgaaccaaagaagtgactctcgatctcgaatcaaaagcgatcgacccac 41791328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 41893423 - 41893470
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||    
T  41893423 aagaactgactcccgatctcgaatcaaaagtggttggcccaccagact 41893470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 75
Target Start/End: Original strand, 16457484 - 16457522
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcc 75  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16457484 aagaactgactcccgatctcgaatcaaaagtgatcggcc 16457522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 10248558 - 10248619
Alignment:
Q  19 aaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccacca 80  Q
    |||||||||  ||| || ||||||||||||||||||| ||||||||||||||||| ||||||    
T  10248558 aaaaccaaacttgagccaaagaactgactcccgatcttgaatcaaaagtgatcggtccacca 10248619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 40531281 - 40531242
Alignment:
Q  46 ctcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  40531281 ctcccgatctcgaatcaaaagtgatcggcccatcagactt 40531242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 33967375 - 33967337
Alignment:
Q  46 ctcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  33967375 ctcctgatctcgaatcaaaagtgatcggcccaccagact 33967337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 12198064 - 12198140
Alignment:
Q  9 aaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||||| ||||||||||  ||| || |||||||||||||| || |  ||| |||||||||||| |||||||||||    
T  12198064 aaaaaagctcaaaaccaaacttgagccaaagaactgactcccaattttcaattaaaagtgatcggtccaccagactt 12198140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 12442492 - 12442568
Alignment:
Q  9 aaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||||| ||||||||||  ||| || |||||||||||||| || |  ||| |||||||||||| |||||||||||    
T  12442492 aaaaaagctcaaaaccaaacttgagccaaagaactgactcccaattttcaattaaaagtgatcggtccaccagactt 12442568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 12898300 - 12898344
Alignment:
Q  40 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||| |||||||||||||||||||||||  |||||||||    
T  12898300 aactgactccggatctcgaatcaaaagtgatcgggtcaccagact 12898344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 20138484 - 20138448
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcgg 73  Q
    |||||||||||||||||||| ||||||||||||||||    
T  20138484 aagaactgactcccgatctcaaatcaaaagtgatcgg 20138448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 23264761 - 23264716
Alignment:
Q  40 aactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||||||||||||||||||||||| |||| || ||| |||||||    
T  23264761 aactgactcccgatctcgaatcaaaattgataggtccatcagactt 23264716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 80
Target Start/End: Complemental strand, 36796654 - 36796621
Alignment:
Q  47 tcccgatctcgaatcaaaagtgatcggcccacca 80  Q
    ||||||||||||||||||||||||||||| ||||    
T  36796654 tcccgatctcgaatcaaaagtgatcggccaacca 36796621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 5e-32; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 31721770 - 31721640
Alignment:
Q  2 gaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcagaa 100  Q
    ||||||||||| | ||||||||||||| ||||||  ||||||||||||||||||||||||||||| ||||||||||  |||||| |||| || |||||||    
T  31721770 gaacaccaaaacaacccaaaaccaaaaatgaaccagagaactgactcccgatctcgaatcaaaagcgatcggcccattagacttcagaaccacatcagaa 31721671  T
Q  101 gggcacctcttacctccggtccaccatagaa 131  Q
    ||||||| |||||| ||||||||||| ||||    
T  31721670 gggcaccccttacccccggtccaccagagaa 31721640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 8731012 - 8730928
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaac-tgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||| ||| || ||||||||||    
T  8731012 agaacaccaaaaaagcccaaaaccaaaacctgaaccaaagaactgactcccgatctcgaattaaaagcgataggtccaccagact 8730928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 13954230 - 13954351
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacct 108  Q
    ||||||||||||||||||  ||| || ||| | ||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||| ||||||     
T  13954230 aaaaagcccaaaaccaaacttgagccaaagtaatgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaa-ggcaccc 13954328  T
Q  109 cttacctccggtccaccatagaa 131  Q
    || |||| |||| ||||| ||||    
T  13954329 ctcaccttcggtacaccagagaa 13954351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 39184172 - 39184281
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaac--tgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccaga-cttagaatcaaatca 97  Q
    |||||||||||||||| ||||||||||    |||||| ||||||||||| |||||||||||||||||||||||||||||||||| |  |  |||||||||    
T  39184172 agaacaccaaaaaagctcaaaaccaaatgcttgaaccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagaccacatgatcaaatca 39184271  T
Q  98 gaagggcacc 107  Q
    ||||||||||    
T  39184272 gaagggcacc 39184281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 7392054 - 7392125
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||| | |||||||||||||||||    
T  7392054 aagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaatcagaagggcacc 7392125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 22675311 - 22675395
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||||||  ||||||||||||||||  ||| || |||||||||||||||||||||||||||||  |||||| |||||||||||    
T  22675311 agaacaccattaaagcccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaatcgatcggtccaccagactt 22675395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 23426434 - 23426354
Alignment:
Q  5 caccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||| ||| ||||||||||||||| |||  |||||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  23426434 caccgaaatagcccaaaaccaaaattgattcgaagaactgactcccaatctcgaatcaaaagtgttcggtccaccagactt 23426354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 34378156 - 34378108
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34378156 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 34378108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 33258878 - 33259000
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacct 108  Q
    |||||||||||| ||||    ||||| ||||||| ||||| ||||||||||||||||||||||||||||||||| |||| | |||| ||||||| ||||     
T  33258878 aaaaagcccaaatccaacctcgaaccaaagaactaactcctgatctcgaatcaaaagtgatcggcccaccagactttagcaccaaaacagaaggacaccc 33258977  T
Q  109 cttacctccggtccaccatagaa 131  Q
    || |||| |||| ||||| ||||    
T  33258978 ctcaccttcggtacaccagagaa 33259000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 7195262 - 7195310
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7195262 aagaactgactcccgatctcgaatcaaaagtgatcggctcaccagactt 7195310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 27713163 - 27713079
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||| || |||||||||||||||||  ||| || ||||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  27713163 agaacaacataaaagcccaaaaccaaacttgagccaaagaactgattcccgatctcgaatcaaaaacgatcggcccactagactt 27713079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 8297553 - 8297455
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccacca-gacttagaatcaaatcagaagggcacc 107  Q
    |||||| |||||||||||  ||| || ||||||||||||||||||||||||||||| | ||  |||||||| |  |||||| |||||||||||||||||    
T  8297553 aaaaagtccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaaattattagcccaccatgctttagaaccaaatcagaagggcacc 8297455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 21402833 - 21402903
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccacca 80  Q
    ||||||| |||||||||| ||||  | |||||||||||||||||||||||  |||||||||||||||||||    
T  21402833 aaaaagctcaaaaccaaacctgagtcaaagaactgactcccgatctcgaactaaaagtgatcggcccacca 21402903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 105
Target Start/End: Original strand, 14302426 - 14302522
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggca 105  Q
    ||||||||||||||||||  ||  || |||||||||||||| |||||||| ||||||||||| | ||||||||| |||| | |||| ||||||||||    
T  14302426 aaaaagcccaaaaccaaacttgctccaaagaactgactcccaatctcgaaccaaaagtgatcagtccaccagactttaggaccaaaacagaagggca 14302522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 24072254 - 24072360
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcaga 99  Q
    |||||||||||||| ||| ||| |||   |||||| ||||||||||| |||||||| ||||||||| |||| ||| ||||||| |||| | |||||||||    
T  24072254 agaacaccaaaaaaaccccaaatcaact-tgaaccaaagaactgacttccgatctcaaatcaaaagcgatcagccaaccagactttaggaccaaatcaga 24072352  T
Q  100 agggcacc 107  Q
    ||||||||    
T  24072353 agggcacc 24072360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 12046308 - 12046252
Alignment:
Q  42 ctgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatca 97  Q
    |||| |||||||||||||||||||||||||||||||||| ||||  |||||||||||    
T  12046308 ctgagtcccgatctcgaatcaaaagtgatcggcccaccaaacttccgaatcaaatca 12046252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 25992065 - 25992017
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||||||||| ||||||||||||||||| ||| ||||||||||||||    
T  25992065 aagaactgactctcgatctcgaatcaaaagcgattggcccaccagactt 25992017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 39024452 - 39024544
Alignment:
Q  16 cccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcagaagggcacc 107  Q
    ||||||||||||  |||||| ||||| |||||||||||||||||||||||| ||| |  |||||| |||| || | ||| |||||||||||||    
T  39024452 cccaaaaccaaacttgaaccaaagaagtgactcccgatctcgaatcaaaagcgattgagccaccaaacttcaggaccaactcagaagggcacc 39024544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 26045960 - 26046035
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||| |||||||||||  ||| || ||  ||| |||||||||||||||||||||||||||||  ||||||||||    
T  26045960 aaaaagtccaaaaccaaacttgagccaaaacactaactcccgatctcgaatcaaaagtgatcggttcaccagactt 26046035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 698413 - 698372
Alignment:
Q  43 tgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  698413 tgactcccgatctcgaatcaaaagagatcggtccaccagact 698372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 17854083 - 17854180
Alignment:
Q  30 tgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcagaagggcacctcttacctccggtccacca 126  Q
    |||||| || || |||||||||||||||| ||||||| | ||||||||||| |||| |  | ||||| ||||||||||| || ||| |||||||||||    
T  17854083 tgaaccaaataattgactcccgatctcgagtcaaaagcggtcggcccaccatacttcaagaccaaattagaagggcacccctcacccccggtccacca 17854180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 18593301 - 18593260
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccac 78  Q
    ||||||| ||||||||||||||||||||||||||| ||||||    
T  18593301 aagaactaactcccgatctcgaatcaaaagtgatctgcccac 18593260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 29087539 - 29087491
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    ||||||||||||| |||||||||||||||| |||| | |||||||||||    
T  29087539 aagaactgactcctgatctcgaatcaaaagggatcagtccaccagactt 29087491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 25341741 - 25341709
Alignment:
Q  52 atctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||| |||||||||||||||||||||||||||    
T  25341741 atctcaaatcaaaagtgatcggcccaccagact 25341709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 17033673 - 17033548
Alignment:
Q  9 aaaaaagcccaaaaccaaaact-gaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact-tagaatcaaatcagaagggcac 106  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||    
T  17033673 aaaaaagcccaaaaccaaaacttgaaccaaagaactgactcccgatctcgattcaaaagtgatcggcccaccagactataggaccaaatcagaagggcac 17033574  T
Q  107 ctcttacctccggtccaccatagaat 132  Q
    | | |||   |||| |||||||||||    
T  17033573 cccctactctcggttcaccatagaat 17033548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 4651872 - 4651743
Alignment:
Q  2 gaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagacttagaatcaaa-tcagaa 100  Q
    ||||||||||||||||||||||||||   |||||  ||| ||||||||||||||||||||||||||||||||||| |||||||| | | |||| ||||||    
T  4651872 gaacaccaaaaaagcccaaaaccaaactagaaccagaga-ctgactcccgatctcgaatcaaaagtgatcggccccccagacttcggaacaaattcagaa 4651774  T
Q  101 gggcacctcttacctccggtccaccatagaa 131  Q
    ||||||| |||||| ||||| ||||| ||||    
T  4651773 gggcaccccttacccccggtacaccagagaa 4651743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 46814495 - 46814585
Alignment:
Q  42 ctgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacctcttacctccggtccaccatagaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||| || ||||| ||||| ||||    
T  46814495 ctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 46814585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 38544724 - 38544809
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaa-ccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    ||||||| |||||| | ||||||||||||| || || |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38544724 agaacactaaaaaacctcaaaaccaaaacttaaaccaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagactt 38544809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 6583212 - 6583310
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    |||||||  |||||||||||||| || ||||| ||||| ||||||||||||||||||||||||| ||||||||| |||| | |||||||||| ||||||    
T  6583212 aaaaagcaaaaaaccaaaactgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaatcagaaaggcacc 6583310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 27102276 - 27102210
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggccc 76  Q
    ||||||||||||||||||  ||| || ||||||||||||||||||||||||||||||||||||||||    
T  27102276 aaaaagcccaaaaccaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggccc 27102210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 7857705 - 7857640
Alignment:
Q  43 tgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||    
T  7857705 tgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacc 7857640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 19598730 - 19598598
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcaga 99  Q
    ||||||||| |||| ||||||| ||||  |||  | |||||||||||| ||||||||||||||||| |||||||||||||||||| || | | || ||||    
T  19598730 agaacaccataaaaacccaaaatcaaacttgagtcaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagacttcaggacccaaccaga 19598631  T
Q  100 agggcacctcttacctccggtccaccatagaat 132  Q
     ||||||| ||||||  |||||||||| |||||    
T  19598630 cgggcaccccttaccctcggtccaccagagaat 19598598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 9313312 - 9313383
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||| |||| | |||||||||||||||||    
T  9313312 aagaactgactcccgatctcgaatcaaaagtgatcagcccactagactttaggaccaaatcagaagggcacc 9313383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 24658987 - 24658916
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||| ||||||||    
T  24658987 aagagctgactcccgatctcgaatcaaaagtgattggcccaccagactttagaaccaaatcagcagggcacc 24658916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 27031863 - 27031958
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacctcttacctccggtccaccatagaa 131  Q
    |||| ||||||| ||||||||||||||||||||||||||||| |||| |||||| |||||||| |||||||| ||| || ||||| ||||| ||||    
T  27031863 aagagctgactctcgatctcgaatcaaaagtgatcggcccactagactttagaaccaaatcagcagggcacccctttcccccggtacaccagagaa 27031958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 31585783 - 31585830
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31585783 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 31585830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 41920510 - 41920463
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41920510 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 41920463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 46692817 - 46692889
Alignment:
Q  12 aaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||||| | ||  ||| || ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  46692817 aaagcccaaaaaccaacttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggcccaccagact 46692889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 24684501 - 24684572
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    ||||||||||  |||||||||||| |||||||||||||||||||||| |||||||||||| || ||||||||    
T  24684501 aagaactgacatccgatctcgaattaaaagtgatcggcccaccagactttagaatcaaattagtagggcacc 24684572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 42374258 - 42374175
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaact-gaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac 83  Q
    ||||| ||||| |||||||||||||||||| ||||| ||  |||||||||||||||| ||||||||| |||||| |||||||||    
T  42374258 agaacgccaaacaagcccaaaaccaaaacttgaaccaaaagactgactcccgatctcaaatcaaaagcgatcggtccaccagac 42374175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 5459213 - 5459172
Alignment:
Q  43 tgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  5459213 tgactcccgatctcgaatcaaaagtgatcggcccaccagact 5459172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 15840938 - 15840995
Alignment:
Q  40 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact-tagaatcaaatc 96  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||    
T  15840938 aactgactcccgatctcgaatcaaaagtgatcagcccaccagactctagaaacaaatc 15840995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 5389419 - 5389483
Alignment:
Q  12 aaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggccc 76  Q
    ||||||||||| ||||  |||  | ||||||||||||||||||||||||||||||||||||||||    
T  5389419 aaagcccaaaaacaaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggccc 5389483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 34774925 - 34774858
Alignment:
Q  40 aactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| |||| | |||||||||||||||||    
T  34774925 aactgactcccgatctcga-tcaaaagtgatcggtccaccagacgttaggaccaaatcagaagggcacc 34774858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 30685927 - 30685974
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||    
T  30685927 aagaactgactcccgatctcaaatcaaaagtgatcggcccacaagact 30685974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 50589194 - 50589325
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcaga 99  Q
    ||||||| ||| |||||||||||||||  ||  || |||||||| |||||||| |||||||||||| |||| ||||||| ||||| || | | || ||||    
T  50589194 agaacactaaataagcccaaaaccaaacttgggccaaagaactggctcccgatttcgaatcaaaagcgatcagcccaccggacttcaggacccaaccaga 50589293  T
Q  100 agggcacctcttacctccggtccaccatagaa 131  Q
     ||||||| |||||| || |||||||| ||||    
T  50589294 cgggcaccccttacccccagtccaccagagaa 50589325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 32864557 - 32864655
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    ||||||||||||||||||  |||  | |||||| |||| |||||||||||| ||||||||| |||||||||| | |||| | |||||| ||||||||||    
T  32864557 aaaaagcccaaaaccaaacttgagtcaaagaaccgacttccgatctcgaattaaaagtgattggcccaccagcctttaggaccaaatcggaagggcacc 32864655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 30655615 - 30655571
Alignment:
Q  40 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||    
T  30655615 aactgactcccgatctcgaatcaaaagcgatcggcccactagact 30655571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 24449953 - 24449996
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccacca 80  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  24449953 aagaactgacttccgatctcaaatcaaaagtgatcggcccacca 24449996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 27905493 - 27905422
Alignment:
Q  14 agcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||||||| |||  |||| | ||||||| ||| | ||||||||||||||||||||||| |||||||||||    
T  27905493 agcccaaaacaaaacatgaatcaaagaactaacttctgatctcgaatcaaaagtgatcggtccaccagactt 27905422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 46603462 - 46603403
Alignment:
Q  25 aaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||| |||||| |||||||||||| ||||||||||||||||| ||  |||||||||||||    
T  46603462 aaaattgaaccaaagaactgactctcgatctcgaatcaaaagcgaatggcccaccagact 46603403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 10785455 - 10785524
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccacc 79  Q
    ||||||||||||||||||  ||| || || |||||||||||||||||||| ||||| | | |||||||||    
T  10785455 aaaaagcccaaaaccaaacttgagccaaacaactgactcccgatctcgaagcaaaattaaccggcccacc 10785524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 38564950 - 38564912
Alignment:
Q  46 ctcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  38564950 ctcccgatctcgaatcaaaagcgatcggcccacgagact 38564912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 16147641 - 16147564
Alignment:
Q  9 aaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactta 86  Q
    ||||||| |||||| ||||  ||| || ||||||||||||||||| | ||||||||| | |||| ||||||| |||||    
T  16147641 aaaaaagtccaaaatcaaacttgacccaaagaactgactcccgatattgaatcaaaattcatcgtcccaccatactta 16147564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 42374090 - 42374049
Alignment:
Q  41 actgactcccgatctcgaatcaaaagtgatcggcccaccaga 82  Q
    ||||||||||||||||||||||||||| | ||| ||||||||    
T  42374090 actgactcccgatctcgaatcaaaagtaaccggtccaccaga 42374049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 33034672 - 33034716
Alignment:
Q  40 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||  ||||||||||||| ||||||||| |||||||||||    
T  33034672 aactgactttcgatctcgaatcagaagtgatcgacccaccagact 33034716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 38485648 - 38485519
Alignment:
Q  2 gaacaccaaaaaagcccaaaaccaaaactgaaccgaaga-actgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcaga 99  Q
    ||||||||||||||||||||||||||   |||||  ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||    
T  38485648 gaacaccaaaaaagcccaaaaccaaactagaacc--agatactgactcccgatctcgaatcaaaagtgatcggcccaccagacttcagaacaaattcaga 38485551  T
Q  100 agggcacctcttacctccggtccaccatagaa 131  Q
    |||||||| |||||| || |||||||| ||||    
T  38485550 agggcaccccttacccccagtccaccagagaa 38485519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 11379113 - 11379197
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaact-gaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||    
T  11379113 agaacaccaaaaaagcccaaaaccaaaacttgaaccaaagtactgactcccgatctcgaatcaaaagcgatcggctcaccagact 11379197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 6584967 - 6584873
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacctcttacctccggtccaccataga 130  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||  |||||||| |||||||||    
T  6584967 aagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccctcgcctccggtacaccataga 6584873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 131
Target Start/End: Original strand, 46133272 - 46133396
Alignment:
Q  9 aaaaaagcccaaaaccaaaact-gaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcagaagggcac 106  Q
    |||||||||||||| | ||||| |||||  ||||||||||||||||||| ||||||||| ||||||| |||||||||| || | ||||||||||||||||    
T  46133272 aaaaaagcccaaaaaccaaacttgaaccagagaactgactcccgatctcaaatcaaaagcgatcggctcaccagacttcagcaccaaatcagaagggcac 46133371  T
Q  107 ctcttacctccggtccaccatagaa 131  Q
      || ||||||||||||||| ||||    
T  46133372 tcctaacctccggtccaccagagaa 46133396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 13311933 - 13311850
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||| |||||| ||||||| ||| ||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13311933 agaacgccaaaacagcccaacacctaacttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 13311850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 12480981 - 12480871
Alignment:
Q  1 agaacacc-aaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcag 98  Q
    |||||||| ||||||||| |||||||||  |||||| |||||||||||||||||||||||||||||| ||||||||||||| |||| || |  |||||||    
T  12480981 agaacacctaaaaaagccaaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccaaacttcaggacaaaatcag 12480882  T
Q  99 aagggcacctc 109  Q
    |||| ||||||    
T  12480881 aaggccacctc 12480871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 3478446 - 3478339
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcaga 99  Q
    |||||||||| |||||||||||| ||   ||| || ||||||| |||||||||||||||||||||||||||||||||||| || |||| | |||| ||||    
T  3478446 agaacaccaacaaagcccaaaactaatcttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggcccaccaaactttaggaccaaaacaga 3478347  T
Q  100 agggcacc 107  Q
    ||||||||    
T  3478346 agggcacc 3478339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 9428092 - 9428175
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||||| ||||||| ||||||   ||||||||||||||||| | |||||||||||||||||||||||| |||||||||    
T  9428092 agaacaccaaaacagcccaagaccaaactagaaccgaagaactgacttctgatctcgaatcaaaagtgatcggctcaccagact 9428175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 24324793 - 24324892
Alignment:
Q  10 aaaaagcccaaaaccaaaact-gaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    ||||||||||||||||||||| || || ||||| ||||||||||||||||||||||| |||||||||||||| || |||  | |||||||||||||||||    
T  24324793 aaaaagcccaaaaccaaaacttgagccaaagaattgactcccgatctcgaatcaaaattgatcggcccaccaaactttaagaccaaatcagaagggcacc 24324892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 6716732 - 6716830
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    ||||| ||||| ||||||  ||| || ||||||||||||||||||||||||||||||||||||||| ||||||| |||  || ||||||||||||||||    
T  6716732 aaaaaacccaagaccaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcggccaaccagactttatgattaaatcagaagggcacc 6716830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 8745238 - 8745140
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccag-acttagaatcaaatcagaagggcacc 107  Q
    ||||||||||||||||||  ||| || | ||||||| ||||||||||||||||||||||||||||||||||| | |||| | |||||||||||| ||||    
T  8745238 aaaaagcccaaaaccaaacttgatccaacgaactgaatcccgatctcgaatcaaaagtgatcggcccaccagaatttaggaccaaatcagaaggccacc 8745140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 9349832 - 9349759
Alignment:
Q  12 aaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    ||||||||||| ||||  ||||||  |||| |||||||||||||||||||||||||||||||||||||||||||    
T  9349832 aaagcccaaaatcaaacttgaacctgagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactt 9349759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 1320880 - 1320804
Alignment:
Q  10 aaaaagcccaaaaccaaaact-gaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    ||||||||||||||||||||| || || ||||||||||| ||||| | |||||||||||||||||||||||||||||    
T  1320880 aaaaagcccaaaaccaaaacttgagccaaagaactgacttccgattttgaatcaaaagtgatcggcccaccagactt 1320804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 34390020 - 34389950
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcac 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||| || |||||||| |||||||    
T  34390020 aagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttaaaaccaaatcagcagggcac 34389950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 10244240 - 10244195
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccaga 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  10244240 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccaga 10244195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 16954739 - 16954631
Alignment:
Q  10 aaaaagcccaaaaccaaaact-gaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    ||||||||||||||||||||| ||  | |||||||||||  |||||||||| ||||||||||||| | ||||||| |||| | |||||||||||||||||    
T  16954739 aaaaagcccaaaaccaaaacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcggtcaaccagactttaggaccaaatcagaagggcacc 16954640  T
Q  108 tcttacctc 116  Q
     || |||||    
T  16954639 cctcacctc 16954631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 47457009 - 47457141
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcaga 99  Q
    ||||||||| ||||||||| ||| |||  ||| || |||||||||||||| ||||| ||||||||| |||||| ||| ||||||| || | | |||||||    
T  47457009 agaacaccataaaagcccataactaaacttgagccaaagaactgactcccaatctcaaatcaaaagcgatcggtccatcagacttcaggacctaatcaga 47457108  T
Q  100 agggcacctcttacctccggtccaccatagaat 132  Q
     ||||||| |||||| ||| ||||||| |||||    
T  47457109 cgggcaccccttacccccgatccaccagagaat 47457141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 16828931 - 16829030
Alignment:
Q  10 aaaaagcccaaaaccaaaact-gaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    ||||||||||||||||||||| ||  | |||||||||||  |||||||||| ||||||||||| ||| ||||||| |||| | |||||||||||||||||    
T  16828931 aaaaagcccaaaaccaaaacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcagccaaccagactttaggaccaaatcagaagggcacc 16829030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 38306319 - 38306272
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  38306319 aagaactgactcccaatctcgaatcaaaagtgatcggcccaccagact 38306272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 42533281 - 42533346
Alignment:
Q  43 tgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| | |||||||| ||||||||    
T  42533281 tgactcccgatctcgaatcaaaagtgatcagcccaccagactttaggaccaaatcaggagggcacc 42533346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 33435167 - 33435119
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||    
T  33435167 aagaactgactcccgatctcgaatcaaaagtgatcgtctcaccagactt 33435119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 46262151 - 46262189
Alignment:
Q  46 ctcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||||||||||||||||||||||||||||||||    
T  46262151 ctcccgatctcgaatcaaaagtgatcggcccaccagact 46262189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 3419679 - 3419727
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||| |||||||||||||||||||||||||||||| |||||||| ||||    
T  3419679 aagagctgactcccgatctcgaatcaaaagtgatcagcccaccacactt 3419727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 41089771 - 41089819
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  41089771 aagagctgactcccaatctcgaatcaaaagtgatcggtccaccagactt 41089819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 48058641 - 48058725
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||| || ||||| |||||||||||  ||| || || |||||||| |||||||| ||||||||| ||||| ||||||||||||    
T  48058641 agaacaacataaaaggccaaaaccaaacttgagccaaaaaactgacttccgatctcaaatcaaaagcgatcgacccaccagactt 48058725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 3867174 - 3867131
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccacca 80  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||    
T  3867174 aagaactgactcccggtctcgaatcaaaagtgatcagcccacca 3867131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 37795047 - 37795004
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccacca 80  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||    
T  37795047 aagaactgactcccgatctcgaatcaaaactgaacggcccacca 37795004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 47325908 - 47325955
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  47325908 aagagctgactcccgatctcaaatcaaaagcgatcggcccaccagact 47325955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 17802851 - 17802885
Alignment:
Q  49 ccgatctcgaatcaaaagtgatcggcccaccagac 83  Q
    |||||||||||||||||||||||||||||||||||    
T  17802851 ccgatctcgaatcaaaagtgatcggcccaccagac 17802885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 27993568 - 27993606
Alignment:
Q  46 ctcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  27993568 ctcccgatctcgaatcaaaagtgatcggtccaccagact 27993606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 35206725 - 35206763
Alignment:
Q  46 ctcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  35206725 ctcccgatctcggatcaaaagtgatcggcccaccagact 35206763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 44755663 - 44755613
Alignment:
Q  58 aatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    |||||||||||||||||||||||||| |||| | |||||||||||||||||    
T  44755663 aatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 44755613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 25160867 - 25160802
Alignment:
Q  43 tgactcccgatctcgaatcaaaagtgatcggcccaccagact-tagaatcaaatcagaagggcacc 107  Q
    ||||| ||||||||||||||||||| ||||| |||||||||| ||||| ||||| || ||||||||    
T  25160867 tgacttccgatctcgaatcaaaagtaatcggtccaccagactatagaaccaaattagcagggcacc 25160802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 23983281 - 23983205
Alignment:
Q  9 aaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||| ||||||||||||  ||| |  | ||| |||||||||||||||||||||||  ||||| ||||||||||||    
T  23983281 aaaaaaacccaaaaccaaacttgagctaaggaattgactcccgatctcgaatcaaaaacgatcgacccaccagactt 23983205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 44353587 - 44353623
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcgg 73  Q
    |||||||||||||||||||| ||||||||||||||||    
T  44353587 aagaactgactcccgatctcaaatcaaaagtgatcgg 44353623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 5860311 - 5860358
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||| |||||||||||||||||||||||| ||| |||||||| ||||    
T  5860311 aagaattgactcccgatctcgaatcaaaagcgataggcccaccggact 5860358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 84
Target Start/End: Complemental strand, 25153265 - 25153231
Alignment:
Q  50 cgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||||||||||||||||| ||||||||||    
T  25153265 cgatctcgaatcaaaagtgatcggtccaccagact 25153231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 35745856 - 35745898
Alignment:
Q  43 tgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||    
T  35745856 tgacttccgatctcgaatcaaaagtgatcagcccatcagactt 35745898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 26386197 - 26386265
Alignment:
Q  36 gaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact-tagaatcaaatcagaaggg 103  Q
    |||||||  |||||||||||||||||||||| |||||| |||||  |||  | ||||||||||||||||    
T  26386197 gaagaacgaactcccgatctcgaatcaaaagcgatcggaccaccgaactccaaaatcaaatcagaaggg 26386265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 22885120 - 22885204
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||||||||| | ||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22885120 agaacaccaaaacaacccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 22885204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 15126397 - 15126481
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    ||||||||| |||||||||||||||||  ||| || |||||| |||||||||||||||||||||| |||||||||||||||||||    
T  15126397 agaacaccataaaagcccaaaaccaaacatgagccaaagaaccgactcccgatctcgaatcaaaaatgatcggcccaccagactt 15126481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 16960076 - 16959992
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    ||||||||||| |||||||||||||||  ||| || |||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  16960076 agaacaccaaataagcccaaaaccaaacttgagccaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagactt 16959992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 25504895 - 25504979
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaac-tgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||| ||| || ||||||||||    
T  25504895 agaacaccaaaaaagcccaaaaccaaaacctgaaccaaagaactgactcccgatctcgaattaaaagcgataggtccaccagact 25504979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 33788619 - 33788703
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||||||||| | |||||| ||||| ||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  33788619 agaacaccaaaacaacccaaagccaaacctgaaccaaagaactgactcccaatctcgaatcaaaagcgatcggcccaccagactt 33788703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 18681158 - 18681035
Alignment:
Q  2 gaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcagaa 100  Q
    |||||||| |||||||||||||||||  ||||||  ||||||||||||||||||||||||||| |  |||||||||||| |||| | || ||||||||||    
T  18681158 gaacaccacaaaagcccaaaaccaaacttgaaccagagaactgactcccgatctcgaatcaaatgcaatcggcccaccatacttcataaccaaatcagaa 18681059  T
Q  101 gggcacctcttacctccggtccac 124  Q
    |||||   |||||| |||||||||    
T  18681058 gggcagtccttacccccggtccac 18681035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 1269568 - 1269470
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    ||||| ||||||||||||  ||| || ||||||||||| ||||||||||||||||||||||||||||||||||| |||| |  ||||||||||||||||    
T  1269568 aaaaatcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacc 1269470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 2062983 - 2062901
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac 83  Q
    |||||||||||||||||||||||||||  ||| || |||| |||||||||||||||||||||||||  |||||||||||||||    
T  2062983 agaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcaatcggcccaccagac 2062901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 31902402 - 31902532
Alignment:
Q  2 gaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcagaa 100  Q
    ||||| |||| |||| ||||||||||  ||||||  ||||||||||||||||||||||| ||||| ||| |||||||||||||| || ||||||| ||||    
T  31902402 gaacatcaaataagctcaaaaccaaacttgaaccagagaactgactcccgatctcgaattaaaagcgattggcccaccagacttcagcatcaaataagaa 31902501  T
Q  101 gggcacctcttacctccggtccaccatagaa 131  Q
    || |||| || ||| ||||||||||| ||||    
T  31902502 ggacacccctaacccccggtccaccagagaa 31902532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 4472017 - 4471934
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||| ||||||||||| ||||  |||| | |||||||||||||||||||||||||||| | |||||||||||||||||    
T  4472017 agaacaccaataaagcccaaaaacaaacttgaatcaaagaactgactcccgatctcgaatcaaaggcgatcggcccaccagact 4471934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 14106520 - 14106618
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    ||||| || |||||||||||||| |  |||| |||||||||||||| ||||||||||||||||||||||||||| |||| | |||||||| ||||||||    
T  14106520 aaaaacccaaaaaccaaaactgatctaaagagctgactcccgatcttgaatcaaaagtgatcggcccaccagactttaggaccaaatcagcagggcacc 14106618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 7874349 - 7874278
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||| ||||||||    
T  7874349 aagagctgactcccgatctcgaatcaaaagtgatcgacccaccagactttagaaccaaatcagcagggcacc 7874278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 14405282 - 14405195
Alignment:
Q  11 aaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatca 97  Q
    |||||||||||| | ||  ||| || |||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  14405282 aaaagcccaaaaaccaacttgagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatca 14405195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 10173564 - 10173649
Alignment:
Q  1 agaacaccaa-aaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||||||| |||||||||||||||||  ||| || || |||| ||| |||||||||||||||||||||||||||||| ||||||    
T  10173564 agaacaccaacaaaagcccaaaaccaaacttgagccaaataacttacttccgatctcgaatcaaaagtgatcggcccactagactt 10173649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 27740069 - 27739985
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||||||||| | ||||| ||||||  |||||||||  |||||||| |||||| |||||||||| ||||||||||||||||||    
T  27740069 agaacaccaaaacaacccaagaccaaacttgaaccgaaacactgactctcgatcttgaatcaaaagcgatcggcccaccagactt 27739985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 39338888 - 39338935
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  39338888 aagaactgactcccgatctcgaatcaaaagcgatcggcccaccagact 39338935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 37770633 - 37770735
Alignment:
Q  6 accaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccaga-cttagaatcaaatcagaagggc 104  Q
    |||| |||||||||||||||||| ||| |  ||||| ||||||| ||||  |||||||||||||||||||||||| | ||||| | ||||||||| ||||    
T  37770633 accataaaagcccaaaaccaaaattgatctaaagaattgactcctgatccagaatcaaaagtgatcggcccaccaaaccttaggaccaaatcagatgggc 37770732  T
Q  105 acc 107  Q
    |||    
T  37770733 acc 37770735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 10524149 - 10524108
Alignment:
Q  43 tgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  10524149 tgactcccgatctcgaatcaaaagtgatcggcccaccagact 10524108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 13337332 - 13337261
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    ||||||||||| ||||| ||||||||||||||||||||||| ||||| |||   ||||||||||||||||||    
T  13337332 aagaactgacttccgatttcgaatcaaaagtgatcggcccatcagactttaaggtcaaatcagaagggcacc 13337261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 4162052 - 4162090
Alignment:
Q  46 ctcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4162052 ctcccgatctcgaatcaaaagtgatcggcccaccagact 4162090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3745429 - 3745356
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaa-ccgaagaactgactcccgatctcgaatcaaaagtgatcgg 73  Q
    |||||| ||||||||||||||| ||||||| || || ||||||||||| |||||||||||| ||||| ||||||    
T  3745429 agaacaacaaaaaagcccaaaaacaaaacttaaaccaaagaactgacttccgatctcgaattaaaagcgatcgg 3745356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 387231 - 387183
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    ||||| |||||||||||||| |||||||||||||| |||||||||||||    
T  387231 aagaattgactcccgatctcaaatcaaaagtgatcagcccaccagactt 387183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 23650443 - 23650396
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||| |||||||||||||||||||||||| |||| ||||||||||||    
T  23650443 aagaaatgactcccgatctcgaatcaaaagcgatcagcccaccagact 23650396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 34230286 - 34230219
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggccca 77  Q
    ||||||||||||| ||||  ||| || ||||||||||||| |||||||||| |||| |||||||||||    
T  34230286 aaaaagcccaaaatcaaacttgatccaaagaactgactcctgatctcgaataaaaaatgatcggccca 34230219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 7696047 - 7695985
Alignment:
Q  11 aaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcgg 73  Q
    |||||||||||||| ||  ||| || ||||||||||||||| | |||||||||||||||||||    
T  7696047 aaaagcccaaaacctaacttgagccaaagaactgactcccggtatcgaatcaaaagtgatcgg 7695985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16952369 - 16952443
Alignment:
Q  1 agaacaccaaaaaa-gcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggc 74  Q
    |||||||||||||| | |||||||||||  ||| || |||||||| ||||||||||||||||||||  |||||||    
T  16952369 agaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaaaagatcggc 16952443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17023034 - 17023108
Alignment:
Q  1 agaacaccaaaaaa-gcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggc 74  Q
    |||||||||||||| | |||||||||||  ||| || |||||||| ||||||||||||||||||||  |||||||    
T  17023034 agaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaaaagatcggc 17023108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17060340 - 17060414
Alignment:
Q  1 agaacaccaaaaaa-gcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggc 74  Q
    |||||||||||||| | |||||||||||  ||| || |||||||| ||||||||||||||||||||  |||||||    
T  17060340 agaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaaaagatcggc 17060414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 17079264 - 17079190
Alignment:
Q  1 agaacaccaaaaaa-gcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggc 74  Q
    |||||||||||||| | |||||||||||  ||| || |||||||| ||||||||||||||||||||  |||||||    
T  17079264 agaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaaaagatcggc 17079190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 29487206 - 29487094
Alignment:
Q  19 aaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcagaagggcacctcttacctcc 117  Q
    |||||||||  ||||||||||||||||||  | ||||||||||||||| ||| || ||||||||||| |  |||||| |||| ||||||| || ||| ||    
T  29487206 aaaaccaaacatgaaccgaagaactgactatcaatctcgaatcaaaagcgattgg-ccaccagacttcaagatcaaaccagacgggcacccctaaccccc 29487108  T
Q  118 ggtccaccatagaa 131  Q
     |||||||| ||||    
T  29487107 agtccaccagagaa 29487094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 5254321 - 5254266
Alignment:
Q  30 tgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||| |||| | ||||||||||||| ||| ||||||||||||||||| ||||||    
T  5254321 tgaaccaaagagcagactcccgatctcaaattaaaagtgatcggcccactagactt 5254266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 9560820 - 9560859
Alignment:
Q  46 ctcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||||||||||||||||||||||||| |||||| ||||    
T  9560820 ctcccgatctcgaatcaaaagtgatcggtccaccaaactt 9560859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 84
Target Start/End: Original strand, 23665439 - 23665474
Alignment:
Q  49 ccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||||||||||||||||||||||| |||||    
T  23665439 ccgatctcgaatcaaaagtgatcggcccactagact 23665474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 27880117 - 27880189
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggc 74  Q
    |||||| ||||| |||||||| |||||  |||||| || |||||||| |||||||||||||||||  |||||||    
T  27880117 agaacaacaaaacagcccaaa-ccaaacttgaaccaaataactgacttccgatctcgaatcaaaatcgatcggc 27880189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 36276200 - 36276241
Alignment:
Q  43 tgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||||||||||||||||| || | ||||||||||||    
T  36276200 tgactcccgatctcgaatcaaaagcgaacagcccaccagact 36276241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 41086825 - 41086882
Alignment:
Q  51 gatctcgaatcaaaagtgatcggcccaccagact-tagaatcaaatcagaagggcacc 107  Q
    |||||||||||||||||||| | ||||||||||| ||  | |||||||||||||||||    
T  41086825 gatctcgaatcaaaagtgattgacccaccagactatatgaccaaatcagaagggcacc 41086882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 17105470 - 17105398
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaa-gtgatcggcccaccagactt-agaatcaaatcagaagggcacc 107  Q
    |||| |||| || |||||||||||||||| |||||||||||| ||||||| || | |||||||| ||||||||    
T  17105470 aagatctgattctcgatctcgaatcaaaaagtgatcggcccatcagacttcagtaccaaatcagtagggcacc 17105398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 34143079 - 34143123
Alignment:
Q  40 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||| ||||||| ||| |||||||||||||| |||||||||    
T  34143079 aactgacttccgatctagaagcaaaagtgatcggctcaccagact 34143123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 8e-28; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 35800583 - 35800453
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcaga 99  Q
    |||||||||||||||||||||||||||   ||| | ||||||||||| |||||||||||||||||| ||||||  |||||||||| |||| |||||||||    
T  35800583 agaacaccaaaaaagcccaaaaccaaactggaatcaaagaactgacttccgatctcgaatcaaaagcgatcggttcaccagacttcagaaccaaatcaga 35800484  T
Q  100 agggcacctcttacctccggtccaccatagaa 131  Q
    |||||||| |||||| ||| ||||||| ||||    
T  35800483 agggcaccacttacc-ccgatccaccagagaa 35800453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 53823417 - 53823539
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacct 108  Q
    ||||| ||||||||||||  ||| || |||||||||||||||||||||||||||||||||| || ||||||||| |||  | |||||||||||||||||     
T  53823417 aaaaaacccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgattggtccaccagactttatgaccaaatcagaagggcaccc 53823516  T
Q  109 cttacctccggtccaccatagaa 131  Q
    || ||||||||| ||||| ||||    
T  53823517 ctcacctccggtacaccagagaa 53823539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 38929921 - 38929789
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcaga 99  Q
    ||||||||| |||||||||||| ||||  ||| || ||||||||||||  ||||||||||||||||||||||||||| ||||||| || | | || ||||    
T  38929921 agaacaccataaaagcccaaaatcaaacttgagccaaagaactgactcttgatctcgaatcaaaagtgatcggcccagcagacttcaggacccaaccaga 38929822  T
Q  100 agggcacctcttacctccggtccaccatagaat 132  Q
     ||||||| |||||| ||||||||||| |||||    
T  38929821 cgggcaccccttacccccggtccaccagagaat 38929789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 46698771 - 46698879
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaact-gaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact-tagaatcaaatcag 98  Q
    |||||||| ||| ||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||  ||||||||||||||||  || | ||||||||    
T  46698771 agaacacctaaacagcccaaaaacaaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcaatcggcccaccagactacaggaccaaatcag 46698870  T
Q  99 aagggcacc 107  Q
    |||||||||    
T  46698871 aagggcacc 46698879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 25753257 - 25753135
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacct 108  Q
    ||||||||||||| ||||  ||| || |||||||||||||||||||||||||||||||||||| |||||||||| |||| | ||||| ||| ||||||      
T  25753257 aaaaagcccaaaatcaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcgccccaccagactttaggaccaaataagacgggcactc 25753158  T
Q  109 cttacctccggtccaccatagaa 131  Q
    || ||||||||| ||||| ||||    
T  25753157 ctcacctccggtacaccagagaa 25753135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 2061735 - 2061832
Alignment:
Q  11 aaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    |||||||||||| ||||||||| || |||||||||||| | |||||||||||||||||||| ||||||||||| |||| |||||||||  ||||||||    
T  2061735 aaaagcccaaaatcaaaactgatccaaagaactgactctcaatctcgaatcaaaagtgatcagcccaccagactttaggatcaaatcaagagggcacc 2061832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 12296269 - 12296145
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcaga 99  Q
    |||||||||||||||||||||| ||||  |||||| |||||||||||   |||||||||||||||| | ||||| |||||||||| || | |||| ||||    
T  12296269 agaacaccaaaaaagcccaaaatcaaacttgaaccaaagaactgacttttgatctcgaatcaaaagcgctcggcacaccagacttcaggaccaaaccaga 12296170  T
Q  100 agggcacctcttacctccggtccac 124  Q
     ||||||| |||||| |||||||||    
T  12296169 ggggcaccccttacccccggtccac 12296145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 16501817 - 16501718
Alignment:
Q  9 aaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcagaagggcacc 107  Q
    |||||||||||||||||||   ||||| |||| ||||||||||||||||||||||||| ||||||||||||| |||| || |||||||| ||||| ||||    
T  16501817 aaaaaagcccaaaaccaaactagaaccaaagagctgactcccgatctcgaatcaaaagcgatcggcccaccaaacttcaggatcaaatcggaaggccacc 16501718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 39421009 - 39421080
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccag 81  Q
    ||||||||||||||||||||||| |  | ||| |||||||||||||||||||||||||||||||||||||||    
T  39421009 aaaaagcccaaaaccaaaactgatctaaggaattgactcccgatctcgaatcaaaagtgatcggcccaccag 39421080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 22811156 - 22811253
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcac 106  Q
    |||||||| |||||||||  ||| || |||||||||||||||||||||||| |||| ||||||||||||||||| |||  | ||||||||||||||||    
T  22811156 aaaaagcctaaaaccaaacttgagccaaagaactgactcccgatctcgaataaaaaatgatcggcccaccagactttaagaccaaatcagaagggcac 22811253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 31050680 - 31050756
Alignment:
Q  32 aaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    |||| |||| || ||| ||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||    
T  31050680 aaccaaagacctaacttccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagtagggcacc 31050756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 37 - 131
Target Start/End: Complemental strand, 4305783 - 4305688
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact-tagaatcaaatcagaagggcacctcttacctccggtccaccatagaa 131  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||| ||| | ||||| || |||||||| ||| || ||||| ||||| ||||    
T  4305783 aagaactaactcccgatctcgaatcaaaagtgatcgccccaccagactatagtaccaaattagcagggcaccgcttgcccccggtacaccagagaa 4305688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 107
Target Start/End: Original strand, 19311369 - 19311435
Alignment:
Q  40 aactgactcccgatctcgaatcaaaagtgatcggcccaccagacttagaatcaaatcagaagggcacc 107  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||| || |||||||||||| ||||    
T  19311369 aactgactcccg-tctcgaatcaaaagtgatcgacccaccagacttaaaaccaaatcagaaggacacc 19311435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 49747612 - 49747517
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggc 104  Q
    ||||||| ||||||||||  ||| |  |||||||||||| ||||||| ||||||||||||||||| |||||||| |||||| ||||||| ||||||    
T  49747612 aaaaagctcaaaaccaaacttgatcaaaagaactgactctcgatctcaaatcaaaagtgatcggctcaccagactttagaaccaaatcaaaagggc 49747517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 21387220 - 21387274
Alignment:
Q  30 tgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  21387220 tgaatcgaagaactgacttccgatctcgaatcaaaagtgatcggtccaccagact 21387274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 39041300 - 39041344
Alignment:
Q  40 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  39041300 aactgactcctgatctcgaatcaaaagtgatcggcccaccagact 39041344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 6599932 - 6600015
Alignment:
Q  2 gaacaccaaaaa-agcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||| ||| |||||||||| |||  |||| | |||||| ||||||||||||| ||||||||| |||||||||||||||||    
T  6599932 gaacaccataaatagcccaaaacaaaacttgaatcaaagaaccgactcccgatctctaatcaaaagcgatcggcccaccagact 6600015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 38637255 - 38637302
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||    
T  38637255 aagaattgactcccgatctcgaatcaaaagtgatcggcccgccagact 38637302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 19815247 - 19815337
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacctcttacctccggtccacca 126  Q
    ||||||||||||| |||||||||| |||||| ||||| ||||||||| |||| | |||| |||||||||||| || ||| |||||| ||||    
T  19815247 aagaactgactcctgatctcgaataaaaagtaatcggtccaccagactttaggaccaaaacagaagggcacccctcacccccggtcaacca 19815337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 24740098 - 24740172
Alignment:
Q  9 aaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac 83  Q
    |||| ||||||||||||||  |||||| || |||||||||||||||| |||| | ||| ||||||||||||||||    
T  24740098 aaaagagcccaaaaccaaatttgaaccaaataactgactcccgatcttgaattataagcgatcggcccaccagac 24740172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 28966951 - 28966877
Alignment:
Q  11 aaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||||||||||||||  ||| || |||||||||||||| ||||||||||||||  ||||| || |||||||||    
T  28966951 aaaagcccaaaaccaaacttgagccaaagaactgactcccaatctcgaatcaaaaacgatcgccctaccagactt 28966877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 40813813 - 40813851
Alignment:
Q  46 ctcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40813813 ctcccgatctcgaatcaaaagtgatcggcccaccagact 40813851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 8255085 - 8255037
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    ||||||||||| | ||||||| |||||||||||||||||||||||||||    
T  8255085 aagaactgacttctgatctcggatcaaaagtgatcggcccaccagactt 8255037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 8268503 - 8268455
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    ||||||||||| | ||||||| |||||||||||||||||||||||||||    
T  8268503 aagaactgacttctgatctcggatcaaaagtgatcggcccaccagactt 8268455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 53756802 - 53756766
Alignment:
Q  49 ccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||||||||||||||||||||||||||||||||||    
T  53756802 ccgatctcgaatcaaaagtgatcggcccaccagactt 53756766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 36962642 - 36962685
Alignment:
Q  41 actgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||    
T  36962642 actgactcctgatctcgaatcaaaagtaatcggcccaccagact 36962685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 41117963 - 41118037
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||||||||| ||  ||| || ||||||| ||| |||||||||||||||||||||||  ||| |||||||    
T  41117963 aaaaagcccaaaacctaatttgagccaaagaacttacttccgatctcgaatcaaaagtgatcttccctccagact 41118037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 2825831 - 2825770
Alignment:
Q  47 tcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    ||||||||||||||||||| ||||||||||||| ||| |||||| |||||||| || |||||    
T  2825831 tcccgatctcgaatcaaaaatgatcggcccaccggactttagaaccaaatcagcagagcacc 2825770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 30167587 - 30167628
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccac 78  Q
    |||||| ||||||||||||||||||||||||||||| |||||    
T  30167587 aagaaccgactcccgatctcgaatcaaaagtgatcgacccac 30167628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 30964499 - 30964454
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccaga 82  Q
    |||||| ||||||||||| |||||||||||||||||||||| ||||    
T  30964499 aagaacggactcccgatcacgaatcaaaagtgatcggcccatcaga 30964454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 37707392 - 37707425
Alignment:
Q  51 gatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||||||||||||||||||||||||||||    
T  37707392 gatctcgaatcaaaagtgatcggcccaccagact 37707425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 48098418 - 48098317
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacct 108  Q
    ||||||||||||||||||  | | || |  |||||||||||||||||||| |||||||||| |||||| | | | |||  | ||||||||||||||||||    
T  48098418 aaaaagcccaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgggctttatgaccaaatcagaagggcacct 48098319  T
Q  109 ct 110  Q
    ||    
T  48098318 ct 48098317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 2792300 - 2792344
Alignment:
Q  40 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||| ||||||||||||||||||||||||||| || |||||    
T  2792300 aactgacttccgatctcgaatcaaaagtgatcggcctactagact 2792344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 26474891 - 26474851
Alignment:
Q  40 aactgactcccgatctcgaatcaaaagtgatcggcccacca 80  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  26474891 aactaactctcgatctcgaatcaaaagtgatcggcccacca 26474851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 19673194 - 19673088
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcaga 99  Q
    |||||||||| ||| |||||||| |||  ||| || ||||||||||||| |||||||||| ||||| ||  || ||||||||| |||| | |||| ||||    
T  19673194 agaacaccaacaaaacccaaaactaaacttgagccaaagaactgactcctgatctcgaat-aaaagggaatggtccaccagactttaggaccaaaacaga 19673096  T
Q  100 agggcacc 107  Q
    ||||||||    
T  19673095 agggcacc 19673088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 10388610 - 10388572
Alignment:
Q  46 ctcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  10388610 ctcccgacctcgaatcaaaagtgatcggcccacaagact 10388572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 12296098 - 12296061
Alignment:
Q  45 actcccgatctcgaatcaaaagtgatcggcccaccaga 82  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  12296098 actcccgatctcgaagcaaaagtaatcggcccaccaga 12296061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 17416541 - 17416573
Alignment:
Q  46 ctcccgatctcgaatcaaaagtgatcggcccac 78  Q
    |||| ||||||||||||||||||||||||||||    
T  17416541 ctcctgatctcgaatcaaaagtgatcggcccac 17416573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 19468 - 19370
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    ||||||||||||||||||  ||| || ||||||||||| ||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||    
T  19468 aaaaagcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 19370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 30935379 - 30935508
Alignment:
Q  3 aacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcagaag 101  Q
    |||||||||||||| ||||||||||  |||||| || |||| ||||||||||| |||||||||| |||| |||||||| |||| | || |||||||||||    
T  30935379 aacaccaaaaaagctcaaaaccaaacttgaaccaaataactaactcccgatcttgaatcaaaagcgatcagcccaccaaacttcaaaaccaaatcagaag 30935478  T
Q  102 ggcacctcttacctccggtccaccatagaa 131  Q
    |||||| |||||| ||||||||||| ||||    
T  30935479 ggcaccccttacccccggtccaccagagaa 30935508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 1652873 - 1652975
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcaga 99  Q
    |||||||||||||||||||||||||||  |||||| ||||||| ||||| |||||||||||||||||||||||||||| ||| || || | |||||||||    
T  1652873 agaacaccaaaaaagcccaaaaccaaacttgaaccaaagaactaactcctgatctcgaatcaaaagtgatcggcccacaagagttcaggaccaaatcaga 1652972  T
Q  100 agg 102  Q
    |||    
T  1652973 agg 1652975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 5556665 - 5556581
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaact-gaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||  |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||| |||||||||||    
T  5556665 agaacacctgaaaagcccaaaaccaaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgccccaccagact 5556581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 47945800 - 47945667
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcaga 99  Q
    ||||||||| |||||||||||| ||||  ||| || || |||||||||||||||||||||||||||||||||||||||| ||| |||| | | || ||||    
T  47945800 agaacaccataaaagcccaaaatcaaacttgagccaaataactgactcccgatctcgaatcaaaagtgatcggcccaccggactttaggacccaaccaga 47945701  T
Q  100 agggcacctcttacctcc-ggtccaccatagaat 132  Q
     ||||||| |||||| || ||||||||| |||||    
T  47945700 cgggcaccccttaccccctggtccaccagagaat 47945667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 14879521 - 14879422
Alignment:
Q  10 aaaaagcccaaaaccaaaact-gaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    |||||| |||||||||||||| || || | |||| |||||||||||||||||||||||||||||||||||||||| |||| | | |||||||||||||||    
T  14879521 aaaaagtccaaaaccaaaacttgatccaacgaacagactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacccaatcagaagggcacc 14879422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 19176560 - 19176489
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| || ||||||||    
T  19176560 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaattagcagggcacc 19176489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 37123467 - 37123397
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccacca 80  Q
    ||||||||||||||||||  ||| || |||||||||||||| |||||||||||||||||||||||||||||    
T  37123467 aaaaagcccaaaaccaaatttgatccaaagaactgactcccaatctcgaatcaaaagtgatcggcccacca 37123397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 17551015 - 17550968
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17551015 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 17550968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 14194027 - 14193927
Alignment:
Q  10 aaaaagcccaaaaccaaaac--tgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcac 106  Q
    |||||||||||||||||||   ||| || |||||| ||||||| |||||||||||||||||||||| || |||||| |||| | ||||||||||||||||    
T  14194027 aaaaagcccaaaaccaaaaacttgagccaaagaaccgactcccaatctcgaatcaaaagtgatcggtccgccagactttaggaccaaatcagaagggcac 14193928  T
Q  107 c 107  Q
    |    
T  14193927 c 14193927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 14755283 - 14755336
Alignment:
Q  32 aaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14755283 aaccaaagaactgactcccgatcttgaatcaaaagtgatcggcccaccagactt 14755336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 34475783 - 34475848
Alignment:
Q  43 tgactcccgatctcgaatcaaaagtgatcggcccaccagact-tagaatcaaatcagaagggcacc 107  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || ||||||||    
T  34475783 tgactcccgatctcgaatcaaaagtgatcggcccaccagactatagaaacaaattagcagggcacc 34475848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 39021273 - 39021342
Alignment:
Q  11 aaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccacca 80  Q
    ||||||||||||||| |  ||| || |||||||||||||||| |||||||||||||||||||||||||||    
T  39021273 aaaagcccaaaaccagacttgatccaaagaactgactcccgacctcgaatcaaaagtgatcggcccacca 39021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 43012433 - 43012385
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43012433 aagaactgactcccgatctcgaatcaaaagtgatcgggccaccagactt 43012385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 9584076 - 9584147
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| |||| ||||||| || ||||||||    
T  9584076 aagaactgactcccgatctcgaatcaaaagtgatcgatccaccagactttagtatcaaattagcagggcacc 9584147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 33143972 - 33144021
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactta 86  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  33143972 aagaactgactcccgatctcgaatcaaaagtgatcgatccaccagactta 33144021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 20710740 - 20710779
Alignment:
Q  46 ctcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20710740 ctcccgatctcgaatcaaaagtgatcggcccaccagactt 20710779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 25594507 - 25594638
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt-agaatcaaatcaga 99  Q
    ||||||||||||||||||||| ||||   |||||| ||||| | ||| ||||||| |||||||||| ||||  |||||||||||| || | ||||  |||    
T  25594507 agaacaccaaaaaagcccaaagccaatcttgaaccaaagaattaacttccgatctagaatcaaaagcgatctacccaccagacttgaggaccaaaataga 25594606  T
Q  100 agggcacctcttacctccggtccaccatagaa 131  Q
    |||||||| | |||| ||||||| ||| ||||    
T  25594607 agggcaccccatacccccggtccgccagagaa 25594638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 45398854 - 45398783
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagacttagaat-caaatcagaagggcacc 107  Q
    |||| ||||||| |||||||||||||||||||||||| |||||||||||  ||| |||||||| ||||||||    
T  45398854 aagagctgactctcgatctcgaatcaaaagtgatcggtccaccagactttaaatccaaatcagcagggcacc 45398783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 30127319 - 30127273
Alignment:
Q  38 agaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||    
T  30127319 agaactgactcccgatctcgaatcaaaagcgatcggctcaccagact 30127273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 823421 - 823498
Alignment:
Q  1 agaacaccaaaa-aagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggccca 77  Q
    |||||||||||| ||||||||||| |||  ||||   || ||||||||| ||||||||||||||||||||||||||||    
T  823421 agaacaccaaaataagcccaaaacaaaacttgaatgaaacaactgactctcgatctcgaatcaaaagtgatcggccca 823498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 40023602 - 40023643
Alignment:
Q  44 gactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  40023602 gactcccgatctcgaatcaaaagtgatcggtccaccagactt 40023643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 20611841 - 20611801
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggccca 77  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  20611841 aagaactgactcccgatctcgaatcaaaaatgatcggccca 20611801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 24099353 - 24099397
Alignment:
Q  40 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||    
T  24099353 aactgattcccgatatcgaatcaaaagtgatcggcccaccagact 24099397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 25647771 - 25647671
Alignment:
Q  10 aaaaagcccaaaaccaaaa-ctgaa-ccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcac 106  Q
    |||||||| |||||||||| || || || ||||||  |||||||||||||||||||||||||| |||||  ||||| |||| | ||||||||||||||||    
T  25647771 aaaaagcctaaaaccaaaaacttaagccaaagaaccaactcccgatctcgaatcaaaagtgataggcccgtcagactttaggaccaaatcagaagggcac 25647672  T
Q  107 c 107  Q
    |    
T  25647671 c 25647671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 23328381 - 23328444
Alignment:
Q  45 actcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    ||||||||||||||||||||||||||||| |||||| || |||||| |||||||  ||||||||    
T  23328381 actcccgatctcgaatcaaaagtgatcggtccaccaaactttagaaccaaatcaacagggcacc 23328444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 27399053 - 27398968
Alignment:
Q  1 agaacaccaaaaaa-gcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    |||||||||||||| |||||||||||||  |||||| || |||||||||| || |||||||| |||| ||| |  |||||||||||    
T  27399053 agaacaccaaaaaaagcccaaaaccaaacttgaaccaaataactgactcctgacctcgaatctaaagcgattgtgccaccagactt 27398968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 2392529 - 2392573
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccag 81  Q
    ||||||||||| || |||||||||||||||||||||| |||||||    
T  2392529 aagaactgacttccaatctcgaatcaaaagtgatcggtccaccag 2392573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 2394276 - 2394320
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccag 81  Q
    ||||||||||| || |||||||||||||||||||||| |||||||    
T  2394276 aagaactgacttccaatctcgaatcaaaagtgatcggtccaccag 2394320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 31424290 - 31424247
Alignment:
Q  41 actgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||||||||||||||||||| || ||||| ||||||||    
T  31424290 actgactcccgatctcgaatcaaaagcgaccggcctaccagact 31424247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 78
Target Start/End: Complemental strand, 45163910 - 45163872
Alignment:
Q  40 aactgactcccgatctcgaatcaaaagtgatcggcccac 78  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  45163910 aactgacttctgatctcgaatcaaaagtgatcggcccac 45163872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 31482932 - 31482895
Alignment:
Q  47 tcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  31482932 tcccgatctcgaatcaaaagtgatccgcccgccagact 31482895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 2782095 - 2782139
Alignment:
Q  40 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||| ||||||||||  ||||||||||||||| |||||||||||    
T  2782095 aactggctcccgatctaaaatcaaaagtgatcgtcccaccagact 2782139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 19295891 - 19295935
Alignment:
Q  40 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||| ||| ||||| |||||||||||||||| |||||||||||||    
T  19295891 aactaacttccgatatcgaatcaaaagtgataggcccaccagact 19295935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 42134 - 42232
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    ||||| ||||||||||||  ||| || ||||||||||| ||||||||||||||||||||||||||||||||||| |||| |  ||||||||||||||||    
T  42134 aaaaatcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacc 42232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 1003 - 1088
Alignment:
Q  1 agaacaccaaaaaagcccaaaaccaaaactgaa-ccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 85  Q
    ||||||| |||||| | ||||||||||||| || || |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1003 agaacactaaaaaacctcaaaaccaaaacttaaaccaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagactt 1088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 36765 - 36694
Alignment:
Q  37 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||| |||| | |||||||||||||||||    
T  36765 aagaactgactcccgatctcgaatcaaaagtgatcagcccgccagactttaggaccaaatcagaagggcacc 36694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0620 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 3885 - 3841
Alignment:
Q  40 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  3885 aactgactcccgatctcgaatcaaaattgatcggcccaccagact 3841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0620; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 8172 - 8140
Alignment:
Q  52 atctcgaatcaaaagtgatcggcccaccagact 84  Q
    ||||||||||||||||||||||| |||||||||    
T  8172 atctcgaatcaaaagtgatcggctcaccagact 8140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 58212 - 58114
Alignment:
Q  10 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 107  Q
    |||||||| |||||||||  ||| || || || ||||| ||||||| |||||||||||||||||||||||| || |||| | |||||| ||||||||||    
T  58212 aaaaagcctaaaaccaaacttgatccaaacaattgacttccgatcttgaatcaaaagtgatcggcccaccaaactttaggaccaaatctgaagggcacc 58114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 35800 - 35841
Alignment:
Q  43 tgactcccgatctcgaatcaaaagtgatcggcccaccagact 84  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  35800 tgactcccgatctcgaatcaaaagtgatcggcccactagact 35841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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