View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21569_low_2 (Length: 623)

Name: NF21569_low_2
Description: NF21569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21569_low_2
NF21569_low_2
[»] chr8 (44 HSPs)
chr8 (4-339)||(31519771-31520104)
chr8 (4-336)||(21004337-21004661)
chr8 (4-327)||(3094628-3094953)
chr8 (1-339)||(27927820-27928156)
chr8 (20-339)||(44106186-44106503)
chr8 (1-327)||(8885344-8885668)
chr8 (20-323)||(42280786-42281090)
chr8 (37-339)||(34853309-34853608)
chr8 (1-337)||(9073448-9073782)
chr8 (1-339)||(28916727-28917055)
chr8 (4-251)||(37248505-37248750)
chr8 (4-251)||(16310546-16310791)
chr8 (70-250)||(40994805-40994983)
chr8 (154-339)||(36165716-36165902)
chr8 (154-339)||(11698195-11698380)
chr8 (154-327)||(14163948-14164121)
chr8 (154-339)||(17119758-17119943)
chr8 (154-338)||(40392631-40392815)
chr8 (177-338)||(40328015-40328176)
chr8 (179-337)||(36980689-36980847)
chr8 (162-326)||(1076659-1076822)
chr8 (156-327)||(4259528-4259697)
chr8 (154-335)||(36317887-36318072)
chr8 (161-323)||(28423523-28423684)
chr8 (161-339)||(6395186-6395364)
chr8 (1-140)||(41530613-41530754)
chr8 (20-140)||(36404231-36404350)
chr8 (39-126)||(35676628-35676715)
chr8 (5-140)||(7971072-7971208)
chr8 (159-327)||(8621528-8621697)
chr8 (51-117)||(11698385-11698451)
chr8 (202-327)||(34645520-34645645)
chr8 (153-311)||(39093602-39093760)
chr8 (159-251)||(7982478-7982570)
chr8 (182-250)||(31234486-31234554)
chr8 (154-258)||(33472166-33472270)
chr8 (154-258)||(33472373-33472477)
chr8 (182-265)||(10833468-10833551)
chr8 (196-265)||(9845323-9845392)
chr8 (163-326)||(7981618-7981781)
chr8 (158-258)||(10840717-10840817)
chr8 (154-239)||(9845488-9845573)
chr8 (202-246)||(24627717-24627761)
chr8 (196-246)||(41530812-41530862)
[»] chr1 (48 HSPs)
chr1 (4-339)||(33611289-33611622)
chr1 (4-339)||(18583423-18583756)
chr1 (1-339)||(23442682-23443018)
chr1 (4-339)||(49786216-49786548)
chr1 (4-339)||(34162600-34162934)
chr1 (4-327)||(41584556-41584882)
chr1 (4-339)||(17000326-17000659)
chr1 (20-339)||(42545931-42546248)
chr1 (1-272)||(32817557-32817826)
chr1 (52-339)||(49677478-49677763)
chr1 (33-327)||(45046741-45047033)
chr1 (33-327)||(15069732-15070025)
chr1 (20-327)||(7011172-7011478)
chr1 (33-337)||(40650556-40650858)
chr1 (20-339)||(40907813-40908130)
chr1 (40-339)||(28866509-28866806)
chr1 (20-294)||(44573021-44573292)
chr1 (44-339)||(34006246-34006541)
chr1 (33-339)||(45567769-45568059)
chr1 (156-339)||(52744722-52744905)
chr1 (39-339)||(26723367-26723660)
chr1 (4-229)||(32542353-32542563)
chr1 (4-335)||(6223634-6223950)
chr1 (153-337)||(27794925-27795108)
chr1 (68-327)||(38885239-38885481)
chr1 (4-140)||(43319271-43319408)
chr1 (156-339)||(24472706-24472889)
chr1 (155-327)||(3561226-3561398)
chr1 (49-140)||(30829541-30829632)
chr1 (155-327)||(42928980-42929152)
chr1 (49-140)||(24471389-24471481)
chr1 (196-338)||(25563294-25563436)
chr1 (154-249)||(890609-890704)
chr1 (23-96)||(52744937-52745010)
chr1 (23-140)||(38950246-38950353)
chr1 (4-96)||(27794802-27794893)
chr1 (154-265)||(9446048-9446159)
chr1 (182-258)||(9445846-9445922)
chr1 (153-264)||(26230145-26230256)
chr1 (282-335)||(890748-890801)
chr1 (49-140)||(800877-800969)
chr1 (182-258)||(43318940-43319016)
chr1 (195-258)||(800552-800615)
chr1 (232-327)||(45880000-45880095)
chr1 (4-46)||(24471474-24471516)
chr1 (4-46)||(30829625-30829667)
chr1 (153-249)||(8704487-8704583)
chr1 (156-188)||(14912968-14913000)
[»] chr7 (45 HSPs)
chr7 (4-338)||(3304638-3304971)
chr7 (4-339)||(47202441-47202767)
chr7 (23-338)||(8154865-8155178)
chr7 (4-337)||(31642988-31643318)
chr7 (4-327)||(42925531-42925853)
chr7 (1-339)||(3936052-3936388)
chr7 (22-339)||(36468416-36468730)
chr7 (20-307)||(28230379-28230663)
chr7 (4-258)||(24042148-24042400)
chr7 (14-339)||(33573922-33574236)
chr7 (20-339)||(36629168-36629483)
chr7 (33-336)||(36408347-36408648)
chr7 (1-339)||(19225477-19225814)
chr7 (20-337)||(9151777-9152074)
chr7 (20-280)||(37518233-37518491)
chr7 (158-339)||(42864981-42865162)
chr7 (51-323)||(33151200-33151467)
chr7 (51-335)||(31985400-31985685)
chr7 (154-327)||(1518802-1518975)
chr7 (56-336)||(24690215-24690494)
chr7 (395-564)||(18657990-18658162)
chr7 (179-327)||(19818500-19818648)
chr7 (20-139)||(43737087-43737207)
chr7 (156-339)||(36946171-36946353)
chr7 (214-327)||(43737237-43737350)
chr7 (206-337)||(7115151-7115282)
chr7 (153-296)||(5278358-5278501)
chr7 (160-338)||(6467020-6467198)
chr7 (247-335)||(26555040-26555128)
chr7 (4-200)||(6467643-6467839)
chr7 (1-112)||(42877149-42877260)
chr7 (154-287)||(16983673-16983806)
chr7 (161-327)||(48776100-48776268)
chr7 (154-249)||(48775705-48775798)
chr7 (232-338)||(37398771-37398877)
chr7 (156-318)||(48705899-48706061)
chr7 (164-273)||(43185887-43185996)
chr7 (160-339)||(39581840-39582019)
chr7 (43-126)||(26555131-26555214)
chr7 (33-83)||(28346123-28346173)
chr7 (154-251)||(8214257-8214354)
chr7 (196-257)||(8214462-8214523)
chr7 (266-339)||(37518142-37518215)
chr7 (578-607)||(21123081-21123110)
chr7 (285-337)||(47239570-47239622)
[»] chr3 (58 HSPs)
chr3 (4-339)||(2358501-2358835)
chr3 (4-335)||(47301966-47302294)
chr3 (6-339)||(50716201-50716533)
chr3 (6-339)||(50796314-50796646)
chr3 (67-339)||(43472848-43473118)
chr3 (4-327)||(3902697-3903018)
chr3 (49-339)||(52777223-52777511)
chr3 (38-338)||(35142055-35142353)
chr3 (1-339)||(28872947-28873286)
chr3 (1-339)||(47739812-47740147)
chr3 (20-339)||(38977627-38977944)
chr3 (45-339)||(34821222-34821514)
chr3 (4-327)||(501032-501353)
chr3 (33-338)||(3351946-3352249)
chr3 (33-307)||(51540525-51540797)
chr3 (4-243)||(3937335-3937563)
chr3 (4-327)||(51258350-51258672)
chr3 (38-339)||(39149791-39150089)
chr3 (24-327)||(46622686-46622977)
chr3 (20-339)||(49096105-49096422)
chr3 (51-338)||(30721690-30721974)
chr3 (21-269)||(33438486-33438731)
chr3 (169-327)||(47123136-47123294)
chr3 (169-327)||(47130502-47130660)
chr3 (234-339)||(3938357-3938462)
chr3 (4-126)||(48303938-48304060)
chr3 (162-335)||(5127782-5127955)
chr3 (153-325)||(40062473-40062645)
chr3 (196-339)||(35345788-35345931)
chr3 (154-339)||(51492894-51493080)
chr3 (202-327)||(46624863-46624988)
chr3 (20-102)||(34821510-34821592)
chr3 (24-140)||(45244356-45244469)
chr3 (160-326)||(29048444-29048610)
chr3 (161-327)||(47979895-47980063)
chr3 (154-339)||(54229776-54229961)
chr3 (154-327)||(14828809-14828983)
chr3 (1-86)||(47123050-47123135)
chr3 (1-86)||(47130416-47130501)
chr3 (156-327)||(47769359-47769530)
chr3 (222-339)||(4300159-4300276)
chr3 (262-327)||(33439384-33439449)
chr3 (154-249)||(45712053-45712148)
chr3 (161-283)||(27143351-27143473)
chr3 (155-247)||(26053491-26053584)
chr3 (154-273)||(29035893-29036013)
chr3 (42-93)||(42936685-42936736)
chr3 (196-258)||(8735530-8735592)
chr3 (196-258)||(9087771-9087833)
chr3 (4-73)||(42936616-42936685)
chr3 (194-258)||(33842034-33842098)
chr3 (154-225)||(29035809-29035880)
chr3 (183-246)||(45244514-45244577)
chr3 (164-273)||(46555445-46555554)
chr3 (182-246)||(8735309-8735373)
chr3 (182-246)||(9087550-9087614)
chr3 (42-78)||(33700774-33700810)
chr3 (33-73)||(33701457-33701497)
[»] chr4 (57 HSPs)
chr4 (4-339)||(32441766-32442098)
chr4 (4-338)||(6228693-6229023)
chr4 (1-338)||(49396960-49397299)
chr4 (4-338)||(34972829-34973151)
chr4 (7-335)||(6003556-6003882)
chr4 (4-338)||(55052498-55052831)
chr4 (1-339)||(25491274-25491610)
chr4 (1-326)||(48318956-48319279)
chr4 (1-327)||(19835472-19835796)
chr4 (33-339)||(40703648-40703952)
chr4 (1-336)||(17933019-17933352)
chr4 (4-335)||(38536125-38536455)
chr4 (63-339)||(41412977-41413252)
chr4 (1-327)||(2505922-2506248)
chr4 (40-339)||(25752322-25752620)
chr4 (38-339)||(46440151-46440452)
chr4 (3-326)||(7931612-7931931)
chr4 (1-215)||(23523858-23524071)
chr4 (44-339)||(8106387-8106682)
chr4 (158-337)||(53893906-53894085)
chr4 (78-327)||(31582313-31582560)
chr4 (4-312)||(3703155-3703462)
chr4 (7-205)||(29822577-29822773)
chr4 (4-126)||(25539038-25539160)
chr4 (224-339)||(54631371-54631486)
chr4 (181-339)||(52089315-52089473)
chr4 (163-327)||(27742004-27742169)
chr4 (178-327)||(41322983-41323132)
chr4 (20-191)||(54631489-54631659)
chr4 (154-327)||(7863544-7863717)
chr4 (178-323)||(25538873-25539019)
chr4 (4-126)||(38416520-38416642)
chr4 (161-327)||(14474103-14474268)
chr4 (246-335)||(29822775-29822864)
chr4 (1-99)||(53894108-53894206)
chr4 (154-295)||(27879651-27879792)
chr4 (202-339)||(47456751-47456888)
chr4 (154-296)||(37222064-37222206)
chr4 (33-96)||(50392529-50392592)
chr4 (279-339)||(38417020-38417080)
chr4 (260-327)||(49001451-49001518)
chr4 (155-285)||(42497809-42497939)
chr4 (156-250)||(49002822-49002916)
chr4 (154-258)||(25140466-25140570)
chr4 (154-246)||(25140687-25140779)
chr4 (164-251)||(47784101-47784188)
chr4 (194-278)||(47873953-47874037)
chr4 (232-335)||(55838875-55838978)
chr4 (196-246)||(25140894-25140944)
chr4 (280-332)||(4936614-4936666)
chr4 (232-328)||(55774704-55774800)
chr4 (232-295)||(1788175-1788238)
chr4 (161-227)||(38416937-38417004)
chr4 (214-273)||(39118308-39118367)
chr4 (222-335)||(20078719-20078832)
chr4 (206-307)||(46381079-46381180)
chr4 (154-246)||(32600943-32601035)
[»] chr2 (41 HSPs)
chr2 (4-307)||(36948851-36949152)
chr2 (1-338)||(39447106-39447441)
chr2 (1-339)||(32187743-32188080)
chr2 (1-327)||(33452329-33452653)
chr2 (33-338)||(41510304-41510606)
chr2 (1-307)||(44465633-44465938)
chr2 (20-339)||(15994987-15995305)
chr2 (49-339)||(41854778-41855061)
chr2 (49-339)||(42894369-42894657)
chr2 (22-305)||(17474707-17474988)
chr2 (1-296)||(45153708-45154001)
chr2 (4-339)||(5507363-5507699)
chr2 (1-327)||(25217660-25218000)
chr2 (39-339)||(41203060-41203358)
chr2 (49-327)||(36874977-36875253)
chr2 (4-327)||(34517048-34517369)
chr2 (160-336)||(19109892-19110068)
chr2 (155-324)||(16750318-16750485)
chr2 (154-317)||(8388746-8388909)
chr2 (161-327)||(35251032-35251198)
chr2 (43-145)||(4268303-4268406)
chr2 (214-337)||(30763804-30763927)
chr2 (162-339)||(42478846-42479023)
chr2 (206-339)||(38308706-38308840)
chr2 (161-335)||(45293743-45293916)
chr2 (23-140)||(9847495-9847613)
chr2 (49-126)||(33366920-33366996)
chr2 (153-323)||(26228160-26228330)
chr2 (202-328)||(37773700-37773827)
chr2 (50-243)||(38066643-38066834)
chr2 (196-258)||(17766784-17766846)
chr2 (51-125)||(38308880-38308954)
chr2 (262-335)||(13704690-13704763)
chr2 (193-247)||(9847386-9847440)
chr2 (4-119)||(25715310-25715427)
chr2 (196-258)||(34519492-34519554)
chr2 (177-335)||(34817219-34817377)
chr2 (286-327)||(27670723-27670764)
chr2 (262-327)||(38065463-38065528)
chr2 (196-258)||(9847167-9847229)
chr2 (177-273)||(33440450-33440545)
[»] chr5 (61 HSPs)
chr5 (6-327)||(15799136-15799455)
chr5 (4-339)||(4064598-4064932)
chr5 (4-327)||(6156640-6156961)
chr5 (33-339)||(20891551-20891855)
chr5 (19-339)||(12464998-12465303)
chr5 (4-339)||(33487519-33487853)
chr5 (33-327)||(38871609-38871901)
chr5 (1-327)||(39524682-39525006)
chr5 (4-253)||(26190263-26190510)
chr5 (1-339)||(38692662-38692998)
chr5 (39-327)||(32841861-32842149)
chr5 (20-339)||(15957675-15957991)
chr5 (1-327)||(28083269-28083593)
chr5 (51-339)||(31221218-31221504)
chr5 (1-338)||(40619865-40620205)
chr5 (21-327)||(37183672-37183977)
chr5 (20-339)||(38372234-38372543)
chr5 (66-338)||(29862583-29862854)
chr5 (41-338)||(24203564-24203855)
chr5 (154-339)||(7884250-7884435)
chr5 (23-240)||(25746954-25747168)
chr5 (1-339)||(31929004-31929320)
chr5 (1-327)||(27212614-27212934)
chr5 (4-140)||(26319027-26319163)
chr5 (174-339)||(14111944-14112107)
chr5 (7-140)||(37094991-37095123)
chr5 (39-339)||(26095035-26095334)
chr5 (154-339)||(12847500-12847685)
chr5 (154-327)||(13908605-13908778)
chr5 (154-339)||(23269391-23269579)
chr5 (157-327)||(27158144-27158314)
chr5 (231-327)||(26898694-26898790)
chr5 (49-139)||(14111851-14111942)
chr5 (1-140)||(34440650-34440779)
chr5 (20-140)||(36359661-36359781)
chr5 (41-144)||(8032217-8032321)
chr5 (154-337)||(40613556-40613739)
chr5 (154-323)||(41639385-41639557)
chr5 (160-265)||(21070429-21070534)
chr5 (153-265)||(8738938-8739050)
chr5 (49-140)||(38640676-38640767)
chr5 (161-327)||(6800818-6800984)
chr5 (273-339)||(26190201-26190267)
chr5 (154-248)||(27494123-27494217)
chr5 (232-338)||(33901094-33901200)
chr5 (154-258)||(16429339-16429443)
chr5 (153-269)||(26093502-26093618)
chr5 (154-337)||(26622170-26622350)
chr5 (156-258)||(8739148-8739250)
chr5 (154-238)||(1350290-1350374)
chr5 (156-327)||(41253359-41253530)
chr5 (196-258)||(28445169-28445231)
chr5 (236-317)||(7036677-7036758)
chr5 (6-96)||(34529936-34530029)
chr5 (182-249)||(34530300-34530367)
chr5 (33-96)||(43388189-43388252)
chr5 (196-258)||(8973569-8973631)
chr5 (159-296)||(11186097-11186234)
chr5 (193-265)||(16429168-16429240)
chr5 (182-242)||(28445381-28445441)
chr5 (196-246)||(38641033-38641083)
[»] chr6 (32 HSPs)
chr6 (1-339)||(17264354-17264690)
chr6 (4-339)||(23406743-23407077)
chr6 (4-339)||(2813103-2813438)
chr6 (4-339)||(5699505-5699846)
chr6 (20-337)||(4508183-4508498)
chr6 (20-326)||(14587452-14587756)
chr6 (1-217)||(32035057-32035266)
chr6 (20-327)||(3717173-3717479)
chr6 (4-335)||(5638826-5639138)
chr6 (20-325)||(1945423-1945725)
chr6 (4-318)||(24604261-24604575)
chr6 (39-336)||(9905100-9905392)
chr6 (1-145)||(7412772-7412916)
chr6 (104-327)||(2539498-2539719)
chr6 (192-339)||(21514910-21515057)
chr6 (154-337)||(29519374-29519557)
chr6 (4-145)||(33413417-33413558)
chr6 (154-327)||(13800918-13801091)
chr6 (154-323)||(7734221-7734390)
chr6 (214-315)||(32044537-32044638)
chr6 (177-337)||(34528558-34528718)
chr6 (156-339)||(29289504-29289687)
chr6 (161-336)||(6704009-6704183)
chr6 (154-338)||(14037845-14038026)
chr6 (164-335)||(236899-237069)
chr6 (200-326)||(16450355-16450481)
chr6 (296-339)||(33413365-33413408)
chr6 (202-327)||(3365808-3365933)
chr6 (222-338)||(10310311-10310427)
chr6 (196-247)||(17501003-17501054)
chr6 (67-125)||(21517572-21517630)
chr6 (280-337)||(7412971-7413028)
[»] scaffold0137 (1 HSPs)
scaffold0137 (4-335)||(9380-9709)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-339)||(141843-142177)
[»] scaffold0508 (1 HSPs)
scaffold0508 (43-339)||(3273-3568)
[»] scaffold0010 (1 HSPs)
scaffold0010 (194-339)||(140620-140765)
[»] scaffold0182 (2 HSPs)
scaffold0182 (3-139)||(23069-23205)
scaffold0182 (185-258)||(23228-23301)
[»] scaffold0006 (2 HSPs)
scaffold0006 (160-323)||(59865-60028)
scaffold0006 (179-250)||(59480-59551)
[»] scaffold0564 (1 HSPs)
scaffold0564 (159-327)||(4471-4639)


Alignment Details
Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 4 - 339
Target Start/End: Complemental strand, 31520104 - 31519771
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||     
T  31520104 tgttttcctttgttatagggtgaaaaatggagttacggctttttccggattttgtaatccagaaacttcaaaaaatagagcgcgttacatgatgtttccg 31520005  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    |||||||||||||| |||||||| |||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||||||||| |||     
T  31520004 gattacataatccggaaaccccctaaacacccttttttaaggtaaaa---tagttcggattatataatccgaactgtatcagcacaaatcctaaatataa 31519908  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| ||||||||||||||||||||||||| ||    
T  31519907 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcgtatccttttgtttttggtcattgttacttgttcttagtcaaaaatcgggtt 31519808  T
Q  303 ttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    |||||||||||||||||||||||||| ||||||||||    
T  31519807 ttcgggctacttgatcggattgctctgaaacttcccc 31519771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 4 - 336
Target Start/End: Original strand, 21004337 - 21004661
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||     
T  21004337 tgttttcctttgttatagggtgaaaaatggagttacggatttttccggattttgtaatccggaaactttaaaaaataaggcgcgttacat-atgtttccg 21004435  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||       |||||||||||||||||||||     |||||| |||||||||||||||||    
T  21004436 gattacataatccgaaaactccctaaacaccattttttaaggtaaaa---tagttcggattatataatccg-----tatcagtacaaatcctaaacatat 21004527  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 302  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||| |||||||||||||||||||| ||    
T  21004528 ttgtaacatgtatagccattttagggacaatattaatcttcataactcttatccttttgttttgggtcattgttacatgttcttagtcaaaaatcgggtt 21004627  T
Q  303 ttcgggctacttgatcggattgctctaaaacttc 336  Q
    ||| |||||||||||| ||||||||| |||||||    
T  21004628 ttccggctacttgatcagattgctctgaaacttc 21004661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 4 - 327
Target Start/End: Original strand, 3094628 - 3094953
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  3094628 tgttttcctttgttatagggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcattacatgatgtttccg 3094727  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnnt-agttcggattatataatccgaagtgtatcagcacaaatcctaaacata 201  Q
    |||||||||||||| |||||||| ||||||| ||||| |||||         ||||| |||||||||||| ||| ||||||||||||||| ||||||||     
T  3094728 gattacataatccggaaaccccctaaacaccatttttcaaggtaaaacaaacagttccgattatataatctgaactgtatcagcacaaattctaaacatg 3094827  T
Q  202 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 301  Q
    ||||||||||| |||  ||||||| ||||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||||||||||||  |    
T  3094828 tttgtaacatggataatcattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgagt 3094927  T
Q  302 tttcgggctacttgatcggattgctc 327  Q
    |||||| |||||||||||||||||||    
T  3094928 tttcggactacttgatcggattgctc 3094953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 27928156 - 27927820
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||  |||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27928156 tgatgttttcttttgttaaagggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 27928057  T
Q  101 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
    || |||||||||||| | |||||||| ||||||| ||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||    
T  27928056 ccggattacataatcaggaaaccccctaaacaccatttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaaca 27927960  T
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 299  Q
    | ||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||| |||||| ||    
T  27927959 tgtttgtaacatggatagtcattttagagacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagttaaaaattgg 27927860  T
Q  300 attttcgggctacttgatcggattgctctaaaacttcccc 339  Q
     ||||||| |||||||||| ||||||||  ||||||||||    
T  27927859 gttttcggactacttgatcagattgctccgaaacttcccc 27927820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 20 - 339
Target Start/End: Original strand, 44106186 - 44106503
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 119  Q
    |||||||||||  |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  44106186 agggtgaaaaaatgagtaacggatttttccagattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgga 44106285  T
Q  120 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 218  Q
    ||||||| ||||||||||||| |||||        |||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||| ||||     
T  44106286 aaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagt 44106382  T
Q  219 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 318  Q
    ||||  | ||||||||||||||||||||||||| |||||| | ||||| |||||| |||| |||||||||||||||||||| |||||| |||||||||||    
T  44106383 cattccatggacaatattaatcttcctaactctcatccttctgttttgagtcattgttacctgttcttagtcaaaaatcgggttttcgtgctacttgatc 44106482  T
Q  319 ggattgctctaaaacttcccc 339  Q
     ||||||||| ||||||||||    
T  44106483 tgattgctctgaaacttcccc 44106503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 8885668 - 8885344
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||  || ||||||||  |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8885668 tgatgttttcttttgttaaagagtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 8885569  T
Q  101 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
    || |||||||||||||| |||||||| |||||||| |||| |||||        |||||||||||||||||| ||| ||||||||||||||| |||||||    
T  8885568 ccggattacataatccggaaaccccctaaacacccattttcaaggtaaaac---agttcggattatataatctgaactgtatcagcacaaattctaaaca 8885472  T
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 299  Q
    | ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| | |||||||| ||| |||| |||||||||| |||||||||    
T  8885471 tgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggttattgttacctgttcttagtaaaaaatcgg 8885372  T
Q  300 attttcgggctacttgatcggattgctc 327  Q
     ||||||| |||||||||||||||||||    
T  8885371 gttttcggactacttgatcggattgctc 8885344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 20 - 323
Target Start/End: Complemental strand, 42281090 - 42280786
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacat---gatgtttcccgattacataatcc 116  Q
    |||||||||||  |||| |||||||||||||||||| |||||||| |||||||||||||||| |||||||||||   ||||||||| |||||||||||||    
T  42281090 agggtgaaaaaatgagtaacggatttttccggatttcgtaatccgaaaacttcaaaaaatagagcgcgttacatcatgatgtttccagattacataatcc 42280991  T
Q  117 gaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 215  Q
    | |||||||| ||||||||||||| |||||        |||||||||||||||||| ||| |||||||||||||||  ||||||| ||||||||||| ||    
T  42280990 ggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatgcat 42280894  T
Q  216 agccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttg 315  Q
    || ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||| ||||||||||||||||||||||||| || |||||||    
T  42280893 agtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcggatttttggactacttg 42280794  T
Q  316 atcggatt 323  Q
    ||||||||    
T  42280793 atcggatt 42280786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 37 - 339
Target Start/End: Original strand, 34853309 - 34853608
Alignment:
Q  37 tacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccct 135  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||| |||| | |||||| | |||||||||    
T  34853309 tacgggtttttccggattttgtaatccgaaaactttaaaaaatagggcgcgttacatgatgtttccggattaca-aatctggaaaccctctaaacaccct 34853407  T
Q  136 tttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatat 235  Q
    |||| |||||        ||| ||||||||||||||| || ||||||||||||||| ||||| || ||||||||||| |||| |||||||||||||||||    
T  34853408 ttttcaaggtaaaac---agtccggattatataatccaaactgtatcagcacaaattctaaaaatgtttgtaacatggatagtcattttagggacaatat 34853504  T
Q  236 taatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 335  Q
    |||||||||||||||| |||||| | |||||||||||| |||| ||||||||| || ||||||  |||||||  ||||||||||||||||||  ||||||    
T  34853505 taatcttcctaactctcatccttctgttttgggtcattgttacctgttcttaggcagaaatcgagttttcggattacttgatcggattgctccgaaactt 34853604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 1 - 337
Target Start/End: Original strand, 9073448 - 9073782
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||  ||||| |||||  |||| ||||| |||| |||||||  ||||||||||||||||||||||| |   |||||||||||||||    
T  9073448 tgatgttttcttttgttaaagggttaaaaaatgagtaacggactttttcggatttgttaatccggaaacttcaaaaaataagattcgttacatgatgttt 9073547  T
Q  101 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
    || |||||||||||||  |||||||| ||||||| ||||| || ||       ||||||||||||||||| ||||| ||||| ||||||||| |||||||    
T  9073548 ccggattacataatccagaaaccccctaaacaccttttttcaaagtgaaa---tagttcggattatataacccgaactgtattagcacaaattctaaaca 9073644  T
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 299  Q
    | ||||||||||| |||| ||||||||||||||||||||||||||||| ||| |||||| | |||||||||||| |||| ||||||||||||||||||||    
T  9073645 tgtttgtaacatggatagtcattttagggacaatattaatcttcctaagtctcatccttatgttttgggtcattgttacctgttcttagtcaaaaatcgg 9073744  T
Q  300 attttcgggctacttgatcggattgctctaaaacttcc 337  Q
     |||| || ||||||||| |||||||||  ||||||||    
T  9073745 gtttttggactacttgattggattgctccgaaacttcc 9073782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 28916727 - 28917055
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||  |||||||||||  | || |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28916727 tgatgttttcttttgttaaagggtgaaaaaatgggtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttaaatgatgttt 28916826  T
Q  101 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
    |  |||||||||| ||| |||||||| ||||||||||| |||||||            | |||||||||||||||| ||||||||||||||| |||||||    
T  28916827 ctggattacataaaccggaaaccccctaaacaccctttcttaaggta-----------cagattatataatccgaactgtatcagcacaaattctaaaca 28916915  T
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagt-caaaaatcg 298  Q
    | ||||| ||||| |||| |||||||||||||||||||||||| |||||||| |||||| | |||||||||||| |||| ||||||| ||  ||||||||    
T  28916916 tgtttgttacatggatagtcattttagggacaatattaatctttctaactctcatccttctgttttgggtcattgttacatgttcttggtaaaaaaatcg 28917015  T
Q  299 gattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    | ||||| | |||||||||||||||||||  ||||||||||    
T  28917016 ggttttc-gactacttgatcggattgctccgaaacttcccc 28917055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 4 - 251
Target Start/End: Original strand, 37248505 - 37248750
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||| ||||||||||||||| |||||| |||||||||||||||||| |||||||||||     
T  37248505 tgttttcctttgttatagggtgaaaaatggagttacgggtttttctggattttgtaatccgaaaacttaaaaaaatagggcgcgttagatgatgtttccg 37248604  T
Q  104 gattacataatcc-gaaaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    ||||||||||||| |||| |||| ||||||| ||||| |||||        |||| | ||||||||||||||| ||||||||||||||| |||||||| |    
T  37248605 gattacataatccagaaaccccctaaacaccatttttcaaggtaaaac---agtttgaattatataatccgaattgtatcagcacaaattctaaacatgt 37248701  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactct 251  Q
    |||| ||||| |||| |||||||||||||||||||||||||||||||||    
T  37248702 ttgttacatggatagtcattttagggacaatattaatcttcctaactct 37248750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 4 - 251
Target Start/End: Original strand, 16310546 - 16310791
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| | ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||     
T  16310546 tgttttcctttgttatggggtgaaaaatggagttacaggtttttccggattttgtaatccggaaacttcaaaaaatagggtgcgttagatgatttttccg 16310645  T
Q  104 gattacataatcc-gaaaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    ||||||| ||||| ||||  ||| ||||||||||||| |||||        |||||  ||||||||||||||| | ||||||||||||| |||||||| |    
T  16310646 gattacacaatccagaaactccctaaacaccctttttcaaggtaaaac---agttcaaattatataatccgaactatatcagcacaaattctaaacatgt 16310742  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactct 251  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||    
T  16310743 ttgtaacatgaatagtcattttagggacaatattaatcttcctaactct 16310791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 70 - 250
Target Start/End: Original strand, 40994805 - 40994983
Alignment:
Q  70 ttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatata 168  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||| | |||||        |||||||||||||||    
T  40994805 ttcaaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccctttatcaaggtaaaac---agttcggattatata 40994901  T
Q  169 atccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 250  Q
    ||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  40994902 atccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactc 40994983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 154 - 339
Target Start/End: Complemental strand, 36165902 - 36165716
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    |||||||||||||||||||||| |||||||||||||||  ||||||| ||||||||||| ||||  ||||||| |||||||||||||||| ||||||| |    
T  36165902 agttcggattatataatccgaactgtatcagcacaaattgtaaacatgtttgtaacatggatagttattttagagacaatattaatcttcttaactctca 36165803  T
Q  254 tccttttattttgggtcattcttacttgttcttagtcaaaaatc-ggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||||| | |||||||||||| |||| |||||||||| ||||| | || |||| ||||||||||||||||||||||  ||||||||||    
T  36165802 tccttctgttttgggtcattgttacatgttcttagttaaaaaccgggttttttgggctacttgatcggattgctccgaaacttcccc 36165716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 154 - 339
Target Start/End: Complemental strand, 11698380 - 11698195
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    ||||||||||||||||| |||| |||||||||| |||| |||| ||| ||| ||||||| |||| ||||||||||| ||||||||||||||||||||| |    
T  11698380 agttcggattatataattcgaactgtatcagcagaaattctaagcatgtttttaacatggatagtcattttagggataatattaatcttcctaactctca 11698281  T
Q  254 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    |||||   |||| ||||||| |||  |||||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||    
T  11698280 tccttccgtttttggtcattgttatctgttcttagtcaaaaatcgggttttcgggctacttgatcggaatgctccgaaacttcccc 11698195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 154 - 327
Target Start/End: Complemental strand, 14164121 - 14163948
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    |||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||| ||||||||||| |    
T  14164121 agttcggattatataatctgaaatgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaattttcctaactctca 14164022  T
Q  254 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    ||||| | |||| ||||||| |||| ||||||||||||||||  |  |||||||| ||||||||||| ||||||    
T  14164021 tccttctgtttttggtcattgttacctgttcttagtcaaaaactgcgttttcggggtacttgatcggtttgctc 14163948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 154 - 339
Target Start/End: Complemental strand, 17119943 - 17119758
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||| || ||||||||||| || | ||||||| ||||||||||||||||||||||||| |    
T  17119943 agttcggattatataatctgaattgtatcagcacaaattctaaatatgtttgtaacatggattgtcattttacggacaatattaatcttcctaactctca 17119844  T
Q  254 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||||| | |||||| ||||| |||| |||||||||||||||| ||| ||||||| ||||||||| ||||| |||  ||||||||||    
T  17119843 tccttctgttttggatcattgttacctgttcttagtcaaaaaccgggttttcggactacttgattggatttctccgaaacttcccc 17119758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 154 - 338
Target Start/End: Original strand, 40392631 - 40392815
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    |||||||||||||||||| | | ||||||||||||||| |||||||| ||||||||||| |||| ||||||| |||||||||||||||||||||||||||    
T  40392631 agttcggattatataatctgtactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctta 40392730  T
Q  254 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 338  Q
    || || |  ||||||||||| ||| |||||||||||||||||||   |||||  |||||||||||||||| |||  |||||||||    
T  40392731 tctttatgatttgggtcattgttagttgttcttagtcaaaaatcaagttttcaagctacttgatcggatttctccgaaacttccc 40392815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 177 - 338
Target Start/End: Original strand, 40328015 - 40328176
Alignment:
Q  177 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctt 276  Q
    |||||||||| |||| |||||||| ||||||||||| || | ||||||| ||| ||||||||||||||||||||| ||| || | |||||||| ||| ||    
T  40328015 tgtatcagcataaatactaaacatgtttgtaacatggattgtcattttatggataatattaatcttcctaactctcatctttctgttttgggttattgtt 40328114  T
Q  277 acttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 338  Q
    || |||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||    
T  40328115 acctgttcttagtcaaaaatcgggttttcggactacttgatcggattgctccaaaacttccc 40328176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 36980689 - 36980847
Alignment:
Q  179 tatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttac 278  Q
    |||||||||||||  | ||||| ||||||||||| |||  ||||||| |||||||||| ||||| ||||||||||||||| |||||||||||||| |||     
T  36980689 tatcagcacaaattatgaacatgtttgtaacatggataatcattttaaggacaatattgatctttctaactcttatccttctattttgggtcattgttag 36980788  T
Q  279 ttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 337  Q
     | |||||||||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  36980789 ctattcttagtcaaaaatccgattttcgggctacttgatcggattgctccgaaacttcc 36980847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 162 - 326
Target Start/End: Original strand, 1076659 - 1076822
Alignment:
Q  162 ttatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttta 261  Q
    |||||||||||||| ||||| |||||||||  ||||||| ||||||||||| ||| |||||||| ||||||||||||||||| || |||| ||| ||||     
T  1076659 ttatataatccgaattgtat-agcacaaattttaaacatgtttgtaacatgaatatccattttatggacaatattaatcttcatagctctcatcattttg 1076757  T
Q  262 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgct 326  Q
    |||||  ||||| ||| |||||||| |||||||||| ||||||||||||||||||| ||||||||    
T  1076758 ttttgcatcattgttagttgttcttggtcaaaaatctgattttcgggctacttgattggattgct 1076822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 156 - 327
Target Start/End: Complemental strand, 4259697 - 4259528
Alignment:
Q  156 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 255  Q
    |||||||||||||||| ||| ||||||||||||||| |||| ||| ||||||||||  |||| ||||||| ||||||||||||||||||||||| | |||    
T  4259697 ttcggattatataatctgaactgtatcagcacaaattctaagcatgtttgtaacattgatagtcattttatggacaatattaatcttcctaactatcatc 4259598  T
Q  256 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    |  || |||| | ||||| ||| |||||||||||||||| || | ||||||||||||| |||||| ||||||    
T  4259597 c--ttcttttcgatcattgttagttgttcttagtcaaaactctggttttcgggctactagatcggcttgctc 4259528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 154 - 335
Target Start/End: Original strand, 36317887 - 36318072
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacat----atttgtaacatgtatagccattttagggacaatattaatcttcctaact 249  Q
    |||||||||||||||||| ||| ||||| |||||||||  | |||||    |||||||||||| |||  ||||||| |||||||||||||||| ||||||    
T  36317887 agttcggattatataatctgaactgtattagcacaaattgtgaacatgttaatttgtaacatggataatcattttaaggacaatattaatctttctaact 36317986  T
Q  250 cttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 335  Q
    |||||| ||  ||||||||||||| |||  |||||||||||| ||||  |||||||||||||||||||||||| | || |||||||    
T  36317987 cttatctttcaattttgggtcattgttagctgttcttagtcagaaattcgattttcgggctacttgatcggatagttccaaaactt 36318072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 161 - 323
Target Start/End: Original strand, 28423523 - 28423684
Alignment:
Q  161 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 260  Q
    ||||||||||| ||| || ||||  |||||| |||||||| ||||||||||| ||   |||||||  |||||||||||||||||||||||| |||||| |    
T  28423523 attatataatctgaactgcatcactacaaattctaaacatgtttgtaacatggatgaacattttacagacaatattaatcttcctaactctcatccttct 28423622  T
Q  261 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 323  Q
    |||||| ||||||  || ||||||||||||||||||  | |||||||||||||||||||||||    
T  28423623 attttgcgtcatt-gtagttgttcttagtcaaaaattagtttttcgggctacttgatcggatt 28423684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 161 - 339
Target Start/End: Original strand, 6395186 - 6395364
Alignment:
Q  161 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 260  Q
    |||||||||||  || ||||||||||| ||| |  ||| | |||||| |||| |||  ||||||| |||||||||||| |||||||||||| || ||| |    
T  6395186 attatataatcttaattgtatcagcaccaattccgaacttttttgtagcatggatattcattttatggacaatattaaacttcctaactctcattcttct 6395285  T
Q  261 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
     |||| ||||||| |||  ||||| |||||||||||| |||||||||||||||||||||||||| ||| |||| |||||    
T  6395286 gttttaggtcattgttagctgttcgtagtcaaaaatctgattttcgggctacttgatcggattgttctgaaacatcccc 6395364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 41530613 - 41530754
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatga-tgtt 99  Q
    |||||||||||| ||||  |||||| ||||  |||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||| | ||    
T  41530613 tgatgttttcctttgttaaagggtggaaaaatgagttacggatttttccgaattttgtaatccggaaatctcaaaaaatagggcgcgttacatgattttt 41530712  T
Q  100 tcccgattacataatccgaaaaccccc-aaacaccctttttt 140  Q
    | | |||||||||||| ||| |||||| ||| ||||||||||    
T  41530713 ttcagattacataatctgaacaccccctaaaaaccctttttt 41530754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 36404350 - 36404231
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 119  Q
    |||||||||||  |||||||||||| ||||||||||||||||||| |||  ||||||||||||||| |||||||||| ||| | ||||| ||||||||||    
T  36404350 agggtgaaaaaatgagttacggattattccggattttgtaatccgaaaatctcaaaaaatagggcgtgttacatgat-ttttcggattatataatccgaa 36404252  T
Q  120 aacccccaaacaccctttttt 140  Q
    ||| || ||||||||||||||    
T  36404251 aactcctaaacaccctttttt 36404231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 35676715 - 35676628
Alignment:
Q  39 cggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc 126  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| || ||||| ||||| |||||||||||||||| ||||||    
T  35676715 cggatttttccggattttgtaatccggaaactacaaaaaatagggcgcgctatatgatttttccggattacataatccgaacaccccc 35676628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 7971208 - 7971072
Alignment:
Q  5 gttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatg-tttccc 103  Q
    ||||||||  ||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| ||| ||||| ||||      
T  7971208 gttttccttcgttatagggtgaaaaacggagttacggatttttccggattttgtaatctggaaacttca-aaaataggacgcgctacgtgatgttttctg 7971110  T
Q  104 gattacataatccgaaaacccc-caaacaccctttttt 140  Q
    ||||||||||||| || |||||  ||||||||||||||    
T  7971109 gattacataatccaaacaccccataaacaccctttttt 7971072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 159 - 327
Target Start/End: Complemental strand, 8621697 - 8621528
Alignment:
Q  159 ggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 258  Q
    ||||||||||| ||||| |||||||||||||||  | ||  | || |||||||| |||  ||||||| ||| |||||||||||| |||||||||||   |    
T  8621697 ggattatataacccgaactgtatcagcacaaatt-tgaatttgttcgtaacatggataatcattttaaggataatattaatctttctaactcttatggat 8621599  T
Q  259 --ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
      | ||||| ||||||| ||| |||||||||||||||||||  ||||| | ||||||||||||||||||||    
T  8621598 aatcattttaggtcattgttagttgttcttagtcaaaaatccaatttttgagctacttgatcggattgctc 8621528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 11698451 - 11698385
Alignment:
Q  51 gattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccg 117  Q
    |||||||||||||||||||||||||||||| | || |||||||||||||||| ||||||||||||||    
T  11698451 gattttgtaatccggaaacttcaaaaaataagacgtgttacatgatgtttccggattacataatccg 11698385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 202 - 327
Target Start/End: Original strand, 34645520 - 34645645
Alignment:
Q  202 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 301  Q
    ||||||||||  |||| ||||||| ||| ||| ||||| || |||||||| |||||| | |||||| ||||| |||| |||||||||||||| ||| | |    
T  34645520 tttgtaacatagatagtcattttaaggataattttaatttttctaactctcatccttctgttttggatcattgttacatgttcttagtcaaacatccggt 34645619  T
Q  302 tttcgggctacttgatcggattgctc 327  Q
    |||||||||||||||||  |||||||    
T  34645620 tttcgggctacttgatcacattgctc 34645645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 39093602 - 39093760
Alignment:
Q  153 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 252  Q
    ||||||||||||||||||| ||| ||||||| || ||||  ||| ||| ||||||||||  ||| ||| ||||  ||| ||||||||||| | || |||     
T  39093602 tagttcggattatataatctgaaatgtatcaacataaattataagcatgtttgtaacatacataaccagtttaatgaccatattaatctttcaaagtctc 39093701  T
Q  253 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggcta 311  Q
    ||| || | |||| ||||||| ||| ||||||||||| ||||||  |||||||||||||    
T  39093702 atctttatgttttaggtcattgttaattgttcttagtaaaaaatatgattttcgggcta 39093760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 7982478 - 7982570
Alignment:
Q  159 ggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactct 251  Q
    ||||||||||||| ||| |||||| ||||||||  | ||||| ||||||||||  |||| ||||||| |||||||||||||||||| ||||||    
T  7982478 ggattatataatctgaactgtatcggcacaaattttgaacatgtttgtaacataaatagtcattttaaggacaatattaatcttcccaactct 7982570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 31234554 - 31234486
Alignment:
Q  182 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 250  Q
    |||||| ||| || ||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  31234554 cagcaccaattctgaacatatttgtaacatggatagtcattttaaggacaatattaatcttcctaactc 31234486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 258
Target Start/End: Original strand, 33472166 - 33472270
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    |||||| |||| ||||||| || || |  ||||| ||| || ||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||||| |    
T  33472166 agttcgaattacataatccaaactgcacaagcaccaattcttaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactctca 33472265  T
Q  254 tcctt 258  Q
    |||||    
T  33472266 tcctt 33472270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 258
Target Start/End: Original strand, 33472373 - 33472477
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    ||||| ||||| ||||||| || || |||| ||| ||| || ||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||| | |    
T  33472373 agttcagattacataatccaaactgcatcatcaccaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactatca 33472472  T
Q  254 tcctt 258  Q
    |||||    
T  33472473 tcctt 33472477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 265
Target Start/End: Complemental strand, 10833551 - 10833468
Alignment:
Q  182 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatttt 265  Q
    |||||| ||| || ||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||| | |||||||| ||||    
T  10833551 cagcaccaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactttcatccttttgtttt 10833468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 9845323 - 9845392
Alignment:
Q  196 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatttt 265  Q
    ||||| ||||||||||| |||| ||||||| |||||||||||||||||||||||||  ||||| ||||||    
T  9845323 aacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactctcgtccttatatttt 9845392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 326
Target Start/End: Original strand, 7981618 - 7981781
Alignment:
Q  163 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttat 262  Q
    |||| |||| ||| |||| || |||||||  | ||||| ||||||||||| |||   |||||| ||||||| ||||  |||||||| || |||||| | |    
T  7981618 tatagaatctgaactgtaccaacacaaattttgaacatgtttgtaacatggatatttattttaaggacaatgttaagtttcctaaccctcatccttctgt 7981717  T
Q  263 tttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgct 326  Q
    ||||||| ||| ||| ||||| ||| | ||||||   |||||| ||||||||||||||||||||    
T  7981718 tttgggttattgttagttgttattaattaaaaatgcaattttcaggctacttgatcggattgct 7981781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 258
Target Start/End: Complemental strand, 10840817 - 10840717
Alignment:
Q  158 cggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 257  Q
    ||||||||||| | |||| ||||| ||||||||| || |   | ||||||||||| ||| ||| | || ||||||||||||||||||||||||| |||||    
T  10840817 cggattatatatttcgaattgtattagcacaaattctgagtttttttgtaacatggataaccagtgtaaggacaatattaatcttcctaactctcatcct 10840718  T
Q  258 t 258  Q
    |    
T  10840717 t 10840717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 154 - 239
Target Start/End: Original strand, 9845488 - 9845573
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaat 239  Q
    ||||||||||| ||||||| || ||  ||||||| ||| |||||||| ||||||||||| |||  ||||||| || ||||||||||    
T  9845488 agttcggattacataatccaaactgcgtcagcaccaattctaaacatgtttgtaacatggatactcattttaagggcaatattaat 9845573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 202 - 246
Target Start/End: Original strand, 24627717 - 24627761
Alignment:
Q  202 tttgtaacatgtatagccattttagggacaatattaatcttccta 246  Q
    ||||||||||| |||| ||||||| ||||||||||||||||||||    
T  24627717 tttgtaacatggatagtcattttaaggacaatattaatcttccta 24627761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 41530812 - 41530862
Alignment:
Q  196 aacatatttgtaacatgtatagccattttagggacaatattaatcttccta 246  Q
    ||||| ||||||||||| |||| ||||| | ||||||||||||||||||||    
T  41530812 aacatgtttgtaacatggatagtcatttcaaggacaatattaatcttccta 41530862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 231; Significance: 1e-127; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 4 - 339
Target Start/End: Complemental strand, 33611622 - 33611289
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    |||||| || |||| ||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||     
T  33611622 tgtttttctttgttatagggtgaaaaatggagttacggattttttcggattttgtaatttggaaacttcaaaaaatagggcgcgttacatgatgtttccg 33611523  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    |||||||||||| | |||||||| |||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33611522 gattacataatctggaaaccccctaaacacccttttttaaggtaaaa---tagttcggattatataatccgaactgtatcagcacaaatcctaaacatat 33611426  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 302  Q
    ||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||| |||||||||||| |||| |||||||||||||||||||| ||    
T  33611425 ttgtaacatgtatagccattttaaggacaatatttatcttcctaaatcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatcgggtt 33611326  T
Q  303 ttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    |||||||||||||||||||||||||| ||||||||||    
T  33611325 ttcgggctacttgatcggattgctctgaaacttcccc 33611289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 4 - 339
Target Start/End: Complemental strand, 18583756 - 18583423
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| |||||||||||||| ||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |     
T  18583756 tgttttcctttgttatagggtgaaaaatgaagttacggacttttccggattttgtaatctggaaacttaaaaaaatagggcgcgttacatgatgttttcg 18583657  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    |||||||||||||| |||||||| ||||||| |||||||||||       ||||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  18583656 gattacataatccggaaaccccctaaacacctttttttaaggtaaaa---tagttcggattatataatctgaactgtatcggcacaaatcctaaacatat 18583560  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 302  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||| |||||||||||||||||||| ||    
T  18583559 ttgtaacatgtatagccattttagggacaatattaatctgcctaactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatcgggtt 18583460  T
Q  303 ttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    |||||||||||||||||||||||||| ||||||||||    
T  18583459 ttcgggctacttgatcggattgctctgaaacttcccc 18583423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 23442682 - 23443018
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||||| |||| || ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  23442682 tgatgttttcctttgttataaggtgaaaaatggagttacggatttttccggattttataatctggaaacttcaaaaaatagggcgcgttacatgatgttt 23442781  T
Q  101 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
    || ||||| ||||| || |||||||| ||||| | |||||||||||       |||||||||||||||||||| || |||||||||||||||||||||||    
T  23442782 ccggattatataattcggaaaccccccaaacatctttttttaaggtaaaa---tagttcggattatataatccaaactgtatcagcacaaatcctaaaca 23442878  T
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 299  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||    
T  23442879 tatttgtaacatgtacagccattttagggacaatattaatcttcctaactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatcgg 23442978  T
Q  300 attttcgggctacttgatcggattgctctaaaacttcccc 339  Q
     ||||||| |||||||||||||||||||| ||||||||||    
T  23442979 gttttcggactacttgatcggattgctctgaaacttcccc 23443018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 4 - 339
Target Start/End: Original strand, 49786216 - 49786548
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| | || |||||||||||||||||||| |||||||||||||||||| |||||| |||||| |||||||||| |||||||||||||||||||     
T  49786216 tgttttcctttattatagggtgaaaaatggagttatggatttttccggattttgcaatccgaaaactttaaaaaataggacgcgttacatgatgtttccg 49786315  T
Q  104 gattacataatccgaaaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatt 203  Q
    |||||||||||||| ||||||||||||||||||||||||| |       |||||||||||||||||||| || |||||||||||||||||||||| ||||    
T  49786316 gattacataatccggaaacccccaaacacccttttttaagataaaa---tagttcggattatataatcctaactgtatcagcacaaatcctaaacttatt 49786412  T
Q  204 tgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattt 303  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| | |||| |||| |||||||||||||   |||    
T  49786413 tgtaacatgtatagccattttatggacaatattaatcttcctaactcttatccttttgttttgggtcaatgttacatgtttttagtcaaaaatcaagttt 49786512  T
Q  304 tcgggctacttgatcggattgctctaaaacttcccc 339  Q
    |||| |||||||||||||||||||| ||||||||||    
T  49786513 tcggcctacttgatcggattgctctgaaacttcccc 49786548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 4 - 339
Target Start/End: Complemental strand, 34162934 - 34162600
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggattttt-ccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcc 102  Q
    ||||||||| |||| ||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  34162934 tgttttcctttgttatagggtgaaaaatggagttgcgggttttttccggattttgtaatccggaaacttcaaaaaatagggcgtgttagatgatgtttcc 34162835  T
Q  103 cgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacata 201  Q
     |||||||||||||| |||||||| ||||||||||||| |||||        |||||| ||||||||||||||| ||||||||||||||| ||||||||     
T  34162834 ggattacataatccggaaaccccctaaacaccctttttcaaggtaaac----agttcgaattatataatccgaactgtatcagcacaaattctaaacatg 34162739  T
Q  202 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcgga 300  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    |||||||||||| |||| ||||||||||||||||||| |    
T  34162738 tttgtaacatggatagccattttagggacaatattaatcttcctaactcctatccttccgtttttgggtcattgttacatgttcttagtcaaaaatcgaa 34162639  T
Q  301 ttttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||||||||||||||||| || ||||||  ||||||||||    
T  34162638 ttttcgggctacttgattggtttgctccgaaacttcccc 34162600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 4 - 327
Target Start/End: Complemental strand, 41584882 - 41584556
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||| | |||| |||||||||||||| |||||||| |||||| ||||||||||||||||||| |||||||| ||||||  |||||||||||||| |     
T  41584882 tgttttcttttgttatagggtgaaaaatgaagttacgggtttttctggattttgtaatccggaaatttcaaaaactagggcatgttacatgatgttttcg 41584783  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatcc-----gaagtgtatcagcacaaatcctaaa 197  Q
    |||||||||||||| |||||||| ||||| ||||||| |||||        |||||||||||||||||||     ||| ||||||||||||||| |||||    
T  41584782 gattacataatccggaaaccccctaaacatcctttttcaaggtaaatc---agttcggattatataatccaatccgaactgtatcagcacaaattctaaa 41584686  T
Q  198 catatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatc 297  Q
    ||| ||||||||||| |||| ||||||| ||||||||||||||||||||||||| |||||| | |||||||||||| |||| ||||||||||||||||||    
T  41584685 catgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttagtcaaaaatc 41584586  T
Q  298 ggattttcgggctacttgatcggattgctc 327  Q
    || |||||||||||||||||||||||||||    
T  41584585 gggttttcgggctacttgatcggattgctc 41584556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 4 - 339
Target Start/End: Original strand, 17000326 - 17000659
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||| |||||||| ||||| ||||||||||      
T  17000326 tgttttcctttgttatagggtgaaaaatggagttacgg-tttttccggattttgtaattcggaaacatcaaataatagggcacgttagatgatgtttctg 17000424  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    |||||||||||||| |||||||| ||||||| ||||| |||||        |||| | ||||||||||| ||  ||||||||||||||| |||||||| |    
T  17000425 gattacataatccggaaaccccctaaacaccatttttcaaggtaaaac---agtttgaattatataatctgagctgtatcagcacaaattctaaacatgt 17000521  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggat 301  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||    |||||||||||| |||| ||||||||||||||||||| ||    
T  17000522 ttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttccgtttttgggtcattgttacctgttcttagtcaaaaatcgaat 17000621  T
Q  302 tttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    |||||||||||||||| |||||||||  ||||||||||    
T  17000622 tttcgggctacttgattggattgctccgaaacttcccc 17000659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 20 - 339
Target Start/End: Original strand, 42545931 - 42546248
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 119  Q
    ||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||| |||||||    
T  42545931 agggtgaaaaatgaa-taacggatttttccggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggataacatgatccgaa 42546029  T
Q  120 aacccccaaa-cacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 218  Q
    ||||||| || |||||||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| ||||     
T  42546030 aaccccctaagcaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagt 42546126  T
Q  219 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatc-ggattttcgggctacttgat 317  Q
    |||||||| || |||||||||| | |||||||| |||||| | |||||||||||| |||  |||||||||| ||||| | || |||||||||||||||||    
T  42546127 cattttagagataatattaatcattctaactctcatccttctgttttgggtcattgttatctgttcttagttaaaaaccgggtttttcgggctacttgat 42546226  T
Q  318 cggattgctctaaaacttcccc 339  Q
    ||||||||||  ||||||||||    
T  42546227 cggattgctccgaaacttcccc 42546248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 32817826 - 32817557
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||  |||||||||||  |||| |||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  32817826 tgatgttttcttttgttaaagggtgaaaaaatgagtaacgggtttttccagattttgtaatccggaaacttcaaaaaatagggcgcattacatgatgttt 32817727  T
Q  101 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
    || ||||||||||||||||||||||| ||||||||||||| |||||        |||||||||||||||||||||| |||||||||||||||||||||||    
T  32817726 ccagattacataatccgaaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaatcctaaaca 32817630  T
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcat 272  Q
    | ||||||||||| |||| ||||||||||||||||||||||||||||||||  |||||| | |||||||||||    
T  32817629 tgtttgtaacatggatagtcattttagggacaatattaatcttcctaactcccatccttctgttttgggtcat 32817557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 52 - 339
Target Start/End: Original strand, 49677478 - 49677763
Alignment:
Q  52 attttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnn 150  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||| |||||||| |||| |||||         
T  49677478 attttgtaatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccagaaaccccctaaacaccccttttcaaggtaaaac 49677577  T
Q  151 nntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 250  Q
       |||||||||||||||||||||| |||||||||| |||| |||| ||| ||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  49677578 ---agttcggattatataatccgaactgtatcagcataaattctaaccatgtttgtaacatagatagtcattttagggacaatattaatcttcctaactc 49677674  T
Q  251 ttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    | || ||| | |||||||||||| |||| |||||||||| ||||||||| ||||| | |||||||||||||||||||  ||||||||||    
T  49677675 tcattcttatgttttgggtcattgttacatgttcttagttaaaaatcgggttttcagcctacttgatcggattgctccgaaacttcccc 49677763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 33 - 327
Target Start/End: Complemental strand, 45047033 - 45046741
Alignment:
Q  33 gagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaaca 131  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||| ||||| | |||||||||||||||  ||||||||||||| |||||||| |||||    
T  45047033 gagtaacggatttttccggattttgtaatccgaaaacttcaaaaaagagggc-cattacatgatgtttccgaattacataatccggaaaccccctaaaca 45046935  T
Q  132 ccctttttt-aaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggac 230  Q
    |||  |||| || ||       ||||||||||| ||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||| ||||||    
T  45046934 cccccttttcaatgtaaaa---tagttcggattgtataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcatttcagggac 45046838  T
Q  231 aatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    ||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  45046837 aatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagttaaaaaccgggttttcgggctacttgatcggattgctc 45046741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 33 - 327
Target Start/End: Complemental strand, 15070025 - 15069732
Alignment:
Q  33 gagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc--aaac 130  Q
    |||| |||||| ||| |||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||| |||||||| ||||||||  ||||    
T  15070025 gagtaacggatattttcggattttgtaatccggaaacttcaaaaaataggacgtgttacatgatgtttccggattatataatccggaaacccccctaaac 15069926  T
Q  131 acccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggac 230  Q
    ||| ||||| ||| |        ||||| |||||||||||||||| |||||||||||||||  ||||||| ||||||||||| |||| |||||||| |||    
T  15069925 accatttttcaagataaaac---agttcagattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagac 15069829  T
Q  231 aatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    |||||||||||| |||||| | |||||| | |||||| ||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  15069828 aatattaatcttactaactttcatccttctgttttggatcattgttacttgttcttagttaaaaatcggattttcgagctacttgatcggattgctc 15069732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 20 - 327
Target Start/End: Original strand, 7011172 - 7011478
Alignment:
Q  20 agggtgaaaaatggagttacggatttttcc-ggattttgtaatccggaaacttcaaaaaata-gggcgcgttacatgatgtttcccgattacataatccg 117  Q
    ||||||||||||| ||| |||||||||| | ||||||||||||||||||||||||||||| | ||||||||||||||||||||||  || |  |||||||    
T  7011172 agggtgaaaaatg-agtaacggattttttctggattttgtaatccggaaacttcaaaaaaaaagggcgcgttacatgatgtttccgaatcatgtaatccg 7011270  T
Q  118 aaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtata 216  Q
    ||||||||| ||||| | ||||| |||||       ||||||||||||||||||||||| |||||||||| |||| |||||||| ||| ||||||| |||    
T  7011271 aaaaccccctaaacatcatttttcaaggtaaaa---tagttcggattatataatccgaactgtatcagcaaaaattctaaacatgtttctaacatggata 7011367  T
Q  217 gccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttga 316  Q
    | ||||||||||||||||||||||||| ||||||| |||||| | |||| ||||||| | || |||| ||||||||||||||| ||||||||||||||||    
T  7011368 gtcattttagggacaatattaatcttcttaactctcatccttctgttttaggtcattgtaacctgtttttagtcaaaaatcgggttttcgggctacttga 7011467  T
Q  317 tcggattgctc 327  Q
    |||||||||||    
T  7011468 tcggattgctc 7011478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 33 - 337
Target Start/End: Complemental strand, 40650858 - 40650556
Alignment:
Q  33 gagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaaca 131  Q
    |||| |||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||| |||||||  |||||    
T  40650858 gagtaacggattttttcggaatttgtaatccggaaacttcaaaaaatagggcgtgttacatgatgtttctggattacataatccggaaaccccttaaaca 40650759  T
Q  132 cccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggaca 231  Q
    || ||||| |||||        |||||||||||||| ||| ||| |||||||||||||||  ||| ||| ||||||||||| |||  |||||||||||||    
T  40650758 ccatttttcaaggtaaaac---agttcggattatatgatctgaactgtatcagcacaaattataaccatgtttgtaacatggataatcattttagggaca 40650662  T
Q  232 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaa 331  Q
    |||||||||||||||||||| |||||| |  ||||||||||| |||| |||||||||| ||||| ||  |||||||||||||||||||||||||||  ||    
T  40650661 atattaatcttcctaactctcatccttctcgtttgggtcattgttacctgttcttagttaaaaaccgagttttcgggctacttgatcggattgctccgaa 40650562  T
Q  332 acttcc 337  Q
    ||||||    
T  40650561 acttcc 40650556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 20 - 339
Target Start/End: Complemental strand, 40908130 - 40907813
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 119  Q
    |||||||||||  |||| ||||||||||  | |||||| ||||||||||||||||||||| ||||| | |||||||||||| | ||||||||||||||||    
T  40908130 agggtgaaaaaatgagtaacggattttttagaattttgcaatccggaaacttcaaaaaattgggcgtgctacatgatgttttcggattacataatccgaa 40908031  T
Q  120 aaccccc-aaacaccctttttt-aaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatag 217  Q
    ||||||| |||||||||||||| |||||        ||||||||||||||| || ||| ||||||||||||||| |||||||| ||||||||||| |||     
T  40908030 aaccccctaaacaccctttttttaaggtaaaac---agttcggattatata-tctgaactgtatcagcacaaattctaaacatgtttgtaacatggataa 40907935  T
Q  218 ccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 317  Q
     |||||||| |||||||||||||||||||||||  ||| || |  ||||||||||| |||| |||| ||||| ||||||||| ||||||| |||||||||    
T  40907934 tcattttagagacaatattaatcttcctaactcccatctttctgctttgggtcattgttacctgttgttagtaaaaaatcgggttttcggactacttgat 40907835  T
Q  318 cggattgctctaaaacttcccc 339  Q
    ||||||||||  ||||||||||    
T  40907834 cggattgctccgaaacttcccc 40907813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 40 - 339
Target Start/End: Complemental strand, 28866806 - 28866509
Alignment:
Q  40 ggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttt 138  Q
    |||||||||||||||||||||||||||| ||  ||||||||||||||| |||||||| ||||| |||||||||||| ||| |||| | ||||||||||||    
T  28866806 ggatttttccggattttgtaatccggaa-ctataaaaaatagggcgcgctacatgatttttccggattacataatctgaacacccgctaaacaccctttt 28866708  T
Q  139 ttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaa 238  Q
    | ||||         |||||||||||||||||| ||| |||||||||||||||  ||||||| ||||||||||| |||||||||||| ||||| | ||||    
T  28866707 taaagggaaaaac--agttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatggatagccattttatggacatttttaa 28866610  T
Q  239 tcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 338  Q
    ||||| ||||||| |||||| | ||||||| |||| |||| ||||||||||||||||||||  |||||| |||||||||||||||||||  |||||||||    
T  28866609 tcttcataactctcatccttctgttttgggacattgttacctgttcttagtcaaaaatcggtatttcggactacttgatcggattgctccgaaacttccc 28866510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 20 - 294
Target Start/End: Complemental strand, 44573292 - 44573021
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 119  Q
    |||||||||||  |||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |    
T  44573292 agggtgaaaaaatgagtaacagattttttcggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttttcggattacataatccgga 44573193  T
Q  120 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 218  Q
    || |||  |||| || ||||| |||||       ||||||||||||||||||| ||| ||||| |||||||||  ||||||| ||||||||||| ||||     
T  44573192 aatcccttaaactccttttttcaaggtaaaa---tagttcggattatataatctgaactgtat-agcacaaattataaacatgtttgtaacatgaatagt 44573097  T
Q  219 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaa 294  Q
    |||||||||||||||||||||||| |||||||| |||||| | |||||| ||||| ||||||||||||||||||||    
T  44573096 cattttagggacaatattaatctttctaactctcatccttctgttttggatcattgttacttgttcttagtcaaaa 44573021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 44 - 339
Target Start/End: Original strand, 34006246 - 34006541
Alignment:
Q  44 ttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaa 142  Q
    ||||||||||||| ||||||||||| |||||||||||||||| | |||||||| ||||| |||||||||||  ||| |||||  ||||||||||||| ||    
T  34006246 ttttccggattttttaatccggaaaattcaaaaaatagggcgggctacatgatttttccggattacataatttgaacaccccataaacaccctttttcaa 34006345  T
Q  143 ggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatattaatct 241  Q
    ||         ||||| ||||||||||||| || ||||| |||||||||  |||| || ||||||||||| |||| ||||||||||| ||||||||||||    
T  34006346 gggaaaaac--agttcagattatataatccaaattgtattagcacaaattttaaagatgtttgtaacatggatagtcattttagggaacaatattaatct 34006443  T
Q  242 tcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    |||||||||| |||||| ||||||| ||||||  ||| |||||||||||||||||  | |||||||||||||||||||||||||||  ||||||||||    
T  34006444 tcctaactctcatccttctattttgtgtcattgctacctgttcttagtcaaaaattaggttttcgggctacttgatcggattgctccgaaacttcccc 34006541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 33 - 339
Target Start/End: Complemental strand, 45568059 - 45567769
Alignment:
Q  33 gagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaaca 131  Q
    |||| |||| |||||||| |||||||||| ||||||||||||||||||||||||| |||||||| |||   |||||||| |||||||||||||| |||||    
T  45568059 gagtaacgggtttttccgaattttgtaattcggaaacttcaaaaaatagggcgcgctacatgatatttttggattacatgatccgaaaaccccctaaaca 45567960  T
Q  132 cccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggaca 231  Q
    |||||||| |||||                  | | |||||||| ||||||||||||||| |||||||| ||||||| ||| |||| |||||||||||||    
T  45567959 ccctttttaaaggta-----------------aaacaatccgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttagggaca 45567877  T
Q  232 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaa 331  Q
    ||||||||||| |||||||| |||| ||| |||||||||||| |||| |||||||||| ||||||||| ||||||| |||||||||||||||||||  ||    
T  45567876 atattaatctttctaactctcatccatttgttttgggtcattgttacctgttcttagtaaaaaatcgggttttcggactacttgatcggattgctccgaa 45567777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 156 - 339
Target Start/End: Complemental strand, 52744905 - 52744722
Alignment:
Q  156 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 255  Q
    ||||||||| |||||| ||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||| |||| |||||||||||||||||| |||    
T  52744905 ttcggattaaataatctgaactgtatcagcacaaatgctaaacatgtttgtaacatggatagtcattttaggaacaacattaatcttcctaactctcatc 52744806  T
Q  256 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||| | |||||||||||| |||||||||||||||||||||| || ||||||| |||||||||||||||||||  ||||||||||    
T  52744805 cttctgttttgggtcattgttacttgttcttagtcaaaaattgggttttcggactacttgatcggattgctccgaaacttcccc 52744722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 39 - 339
Target Start/End: Complemental strand, 26723660 - 26723367
Alignment:
Q  39 cggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttt 137  Q
    |||||||||  |||||||||||||||||||||||||||||||||||| | |||||||| |||||      ||||||||||| |||||| |||||||||||    
T  26723660 cggatttttttggattttgtaatccggaaacttcaaaaaatagggcg-gctacatgatttttccg-----cataatccgaacaccccctaaacacccttt 26723567  T
Q  138 tttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatatt 236  Q
    |||||||          ||||||||||||||||||||| | |||||||||||||   |||||| ||||||||||| |||| ||||||||||| |||||||    
T  26723566 tttaagggaaaaacg--gttcggattatataatccgaactatatcagcacaaatttaaaacatgtttgtaacatg-atagtcattttagggaacaatatt 26723470  T
Q  237 aatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 336  Q
    ||||||||| ||||| ||| || ||||||| |||||| |||  |||||||||| ||||||||| |||| || |||||||||||||||||||  |||||||    
T  26723469 aatcttccttactctgatcattctattttgagtcattgttatctgttcttagtaaaaaatcgggtttttggactacttgatcggattgctccgaaacttc 26723370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 32542353 - 32542563
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||||||||||||||||||||||||||||||||          ||||||||||| ||||||||||||||| |||||||||||||||| |     
T  32542353 tgttttcctttgttgtagggtgaaaaatggagttacggatttt----------gtaatccggaatcttcaaaaaatagggtgcgttacatgatgtttacg 32542442  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    |||||||||||||  |||||||| |||||||||||   |||||       ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32542443 gattacataatccagaaaccccctaaacacccttt---aaggtaaaa---tagttcggattatataatccgaactgtatcagcacaaatcctaaacatat 32542536  T
Q  203 ttgtaacatgtatagccattttaggga 229  Q
    ||||||||||||||| |||| ||||||    
T  32542537 ttgtaacatgtatagtcattctaggga 32542563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 4 - 335
Target Start/End: Complemental strand, 6223950 - 6223634
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa-tagggcgcgttacatgatgtttcc 102  Q
    ||||||||| |||| ||||||||||||  ||||||||||||||| || |||||  |||||| ||||||||||||| ||| |||| ||||||||| |||      
T  6223950 tgttttcctttgttatagggtgaaaaaatgagttacggattttttcgaatttttcaatccgaaaacttcaaaaaaatagagcgcattacatgattttttt 6223851  T
Q  103 cgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacata 201  Q
     |||||||||||||||| |||||  ||||| ||||||| |||||        ||||||||||||||||||| |          |||||||  |||| ||     
T  6223850 ggattacataatccgaacaccccataaacatcctttttcaaggtaaaaac--agttcggattatataatccaa----------cacaaattttaaatatg 6223763  T
Q  202 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 301  Q
    ||||||||||| |||| |||||||||||||||| |     |||||||| | || ||| | |||| ||||||| |||| |||||||||||||||||||| |    
T  6223762 tttgtaacatggatagtcattttagggacaataat-----tcctaactatcattcttctgttttaggtcattgttacatgttcttagtcaaaaatcgggt 6223668  T
Q  302 tttcgggctacttgatcggattgctctaaaactt 335  Q
    ||||||||||||||||||||||||||| ||||||    
T  6223667 tttcgggctacttgatcggattgctctgaaactt 6223634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 153 - 337
Target Start/End: Original strand, 27794925 - 27795108
Alignment:
Q  153 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 252  Q
    ||||||| ||||||||||| ||| ||||||||| |||||  ||||||| ||| ||||||  |||| ||||||| ||||||||||||||||||||||| |     
T  27794925 tagttcgaattatataatctgaactgtatcagcgcaaattttaaacatgtttataacatagatagtcattttatggacaatattaatcttcctaactatc 27795024  T
Q  253 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 337  Q
    || ||| | |||||||||||| |||| |||||||||||||| ||||| |||| ||||||||||||||||||||||  ||||||||    
T  27795025 at-cttctgttttgggtcattgttacctgttcttagtcaaacatcgggtttttgggctacttgatcggattgctccgaaacttcc 27795108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 68 - 327
Target Start/End: Original strand, 38885239 - 38885481
Alignment:
Q  68 acttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattata 166  Q
    |||| |||||| |||||| |||||||||||||||  |||||||||||||| |||||||  ||||||||||||| |||||        | |||||||||||    
T  38885239 acttaaaaaaagagggcgtgttacatgatgtttca-gattacataatccggaaaccccttaaacaccctttttcaaggtaaaac---atttcggattata 38885334  T
Q  167 taatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttg 266  Q
    ||||||||| ||||||||||||||| |||||||| | |              ||||||| ||||||||||||| ||||||||||| |||||| | |||||    
T  38885335 taatccgaactgtatcagcacaaattctaaacatgtgt--------------cattttaaggacaatattaattttcctaactctcatccttctgttttg 38885420  T
Q  267 ggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    ||||||| ||||||||||||||| |||||| || |||||||||||||||||||||||||||    
T  38885421 ggtcattgttacttgttcttagttaaaaattgggttttcgggctacttgatcggattgctc 38885481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 43319408 - 43319271
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| ||||  |||||||||||  ||||||||||||||||||||||||||||||||||||  | |||||||| ||||||||||||||| ||| |     
T  43319408 tgttttcctttgttaaagggtgaaaaaatgagttacggatttttccggattttgtaatccggaaatctaaaaaaatatggcgcgttacatgattttttcg 43319309  T
Q  104 gattacataatccgaaaaccccc-aaacaccctttttt 140  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  43319308 gattacataatccgaaaaccccctaaacactctttttt 43319271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 156 - 339
Target Start/End: Complemental strand, 24472889 - 24472706
Alignment:
Q  156 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 255  Q
    |||||||||||||||||||| | ||| |||||||||  ||||||| ||||||||||| |||| ||||||| ||| |||||||| |||||||||| | ||     
T  24472889 ttcggattatataatccgaactatattagcacaaattttaaacatgtttgtaacatggatagtcattttaaggaaaatattaagcttcctaactatcatt 24472790  T
Q  256 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||| | |||| ||||||| |||  ||||||||||||||||||| ||||  |||| ||||||| |||||||||  ||||||||||    
T  24472789 cttctgtttttggtcattgttagctgttcttagtcaaaaatcgaatttgtgggcaacttgattggattgctccgaaacttcccc 24472706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 155 - 327
Target Start/End: Complemental strand, 3561398 - 3561226
Alignment:
Q  155 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttat 254  Q
    ||||| ||||||||||||||| |||||||||||||||  | ||||| ||||||||||  ||||  |||||| ||||| |||||||||| |||||||| ||    
T  3561398 gttcgaattatataatccgaactgtatcagcacaaattatgaacatgtttgtaacatagatagtaattttaaggacagtattaatctttctaactctcat 3561299  T
Q  255 ccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    | || | |||| ||||||| ||| ||||||||||||||||||| ||| || ||| ||||||||| ||||||||    
T  3561298 cattctgttttaggtcattgttagttgttcttagtcaaaaatccgatctttgggttacttgatcagattgctc 3561226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 49 - 140
Target Start/End: Complemental strand, 30829632 - 30829541
Alignment:
Q  49 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttt 140  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  30829632 cggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgttttcggattacataatccgaaaaccccctaaacaccctttttt 30829541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 155 - 327
Target Start/End: Original strand, 42928980 - 42929152
Alignment:
Q  155 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttat 254  Q
    ||||||||||||||||||| | |||||||| ||||||| | | ||| ||| |||||||||| ||||||||| |||| |||||||| ||| ||||||| ||    
T  42928980 gttcggattatataatccggactgtatcagtacaaatcatgagcatgtttataacatgtattgccattttaaggaccatattaattttcttaactctcat 42929079  T
Q  255 ccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
     ||| | |||| | ||||| ||| ||||||| ||||||||||| | |||||| ||||||||||| ||||||||    
T  42929080 tcttatgttttagatcattgttagttgttctcagtcaaaaatctggttttcgagctacttgatcagattgctc 42929152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 49 - 140
Target Start/End: Complemental strand, 24471481 - 24471389
Alignment:
Q  49 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc--aaacaccctttttt 140  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||    
T  24471481 cggattttgtaatccagaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatccgaaaacccccctaaacaccctttttt 24471389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 196 - 338
Target Start/End: Complemental strand, 25563436 - 25563294
Alignment:
Q  196 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaa 295  Q
    ||||| ||||||| ||| |||| ||||||| |||||||||||| |||| |||| || |||||||| |||| ||||||| ||| ||||| |||||||||||    
T  25563436 aacatgtttgtaatatggatagtcattttaaggacaatattaagcttcataaccctcatccttttgttttaggtcattgttagttgttattagtcaaaaa 25563337  T
Q  296 tcggattttcgggctacttgatcggattgctctaaaacttccc 338  Q
    || ||| |||| ||||||||||||||||||||  |||||||||    
T  25563336 tccgatattcgagctacttgatcggattgctccgaaacttccc 25563294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 154 - 249
Target Start/End: Original strand, 890609 - 890704
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 249  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||   | ||||||||||| ||| ||| |||| ||||||||||||||||| |||||    
T  890609 agttcggattatattatccgaaatgtatcagcacaaattctaagtctgtttgtaacatggataaccagtttaaggacaatattaatcttcataact 890704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 52745010 - 52744937
Alignment:
Q  23 gtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgat 96  Q
    ||||||||  |||| ||||||||||||| ||||||||||| | |||||||||||||||||||||| ||||||||    
T  52745010 gtgaaaaaatgagtaacggatttttccgaattttgtaatctgaaaacttcaaaaaatagggcgcgctacatgat 52744937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 140
Target Start/End: Original strand, 38950246 - 38950353
Alignment:
Q  23 gtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaac 122  Q
    |||||||||| |||||||||||||||| |||||||||||||          ||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  38950246 gtgaaaaatg-agttacggatttttccagattttgtaatcc----------aaaaatagggcgcgttacatgattttttcagattacataatccgaaaac 38950334  T
Q  123 -ccccaaacaccctttttt 140  Q
     ||| |||||| |||||||    
T  38950335 tccctaaacactctttttt 38950353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 27794802 - 27794893
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgat 96  Q
    ||||||||| |||| ||||||||||||  |||||| |||||||| | |||||||||||||| |||  || ||||||||||||| |||||||||    
T  27794802 tgttttcctttgttatagggtgaaaaaatgagttatggattttttcagattttgtaatccgaaaatctc-aaaaatagggcgctttacatgat 27794893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 265
Target Start/End: Complemental strand, 9446159 - 9446048
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    |||||||||||  |||||||||  ||| |||||| ||| || ||||| ||| ||||||| |||| ||||||| ||||||||||||||||| || || | |    
T  9446159 agttcggattacgtaatccgaacagtaccagcaccaattctgaacatgtttataacatggatagtcattttaaggacaatattaatcttcttagctttca 9446060  T
Q  254 tccttttatttt 265  Q
    ||||| ||||||    
T  9446059 tccttgtatttt 9446048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 9445922 - 9445846
Alignment:
Q  182 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 258  Q
    |||||| ||| |||||||| |||||| |||| |||| ||||||| ||| ||| ||||||||||||||||| ||||||    
T  9445922 cagcaccaattctaaacatctttgtagcatggatagtcattttaaggagaatgttaatcttcctaactctcatcctt 9445846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 153 - 264
Target Start/End: Original strand, 26230145 - 26230256
Alignment:
Q  153 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 252  Q
    |||| |||||||||||| ||||| ||||||| ||||| | |||| | |  |||||||||| ||||||| |||| |||  |||||||||||| || ||||     
T  26230145 tagtgcggattatataacccgaactgtatcaacacaagttctaatcttgcttgtaacatggatagccaatttaaggatcatattaatcttcatagctctc 26230244  T
Q  253 atccttttattt 264  Q
    |||||| |||||    
T  26230245 atccttctattt 26230256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 282 - 335
Target Start/End: Original strand, 890748 - 890801
Alignment:
Q  282 ttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 335  Q
    |||||||||||||||| | |||||||| ||||||||| |||||||| |||||||    
T  890748 ttcttagtcaaaaatctggttttcgggttacttgatcagattgctccaaaactt 890801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 140
Target Start/End: Complemental strand, 800969 - 800877
Alignment:
Q  49 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttt 140  Q
    |||||||||||||||| |||  |||||||||||||||| |||  |||| ||| | ||||| | |||||||| |||||| ||||||| ||||||    
T  800969 cggattttgtaatccgaaaatctcaaaaaatagggcgctttatttgattttttcggattatagaatccgaacaccccctaaacaccatttttt 800877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 43319016 - 43318940
Alignment:
Q  182 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 258  Q
    |||||| ||| || ||||| ||||||||||  |||| ||||||| | ||||||||||||||||||||| | ||||||    
T  43319016 cagcaccaattctgaacatgtttgtaacattgatagtcattttaagaacaatattaatcttcctaactttcatcctt 43318940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 800615 - 800552
Alignment:
Q  195 aaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 258  Q
    |||||| |||||| |||| |||| ||||||  ||||||||||||| ||||||||||| ||||||    
T  800615 aaacatgtttgtagcatggatagtcatttttaggacaatattaattttcctaactctcatcctt 800552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 327
Target Start/End: Complemental strand, 45880095 - 45880000
Alignment:
Q  232 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    |||||||||||||||||| | |||||| | |||| ||||||| ||| || || |||||||||||||   |||| ||| |||||||||  |||||||    
T  45880095 atattaatcttcctaactttcatccttctgttttaggtcattgttagttttttttagtcaaaaatctagtttttgggatacttgatcaaattgctc 45880000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 24471516 - 24471474
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttt 46  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||    
T  24471516 tgttttcctttgttatagggtgcaaaatggagttacggatttt 24471474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 30829667 - 30829625
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttt 46  Q
    ||||||||| |||| |||||||||||||| |||||||||||||    
T  30829667 tgttttcctttgttatagggtgaaaaatgaagttacggatttt 30829625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 153 - 249
Target Start/End: Complemental strand, 8704583 - 8704487
Alignment:
Q  153 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 249  Q
    |||||| |||||||||||||||| ||||||| ||| | | || |||||  || || |||| |||| ||||||| |||   |||||||||||||||||    
T  8704583 tagttcagattatataatccgaactgtatcaccaccagttctgaacatgattatatcatggatagtcattttaaggatcttattaatcttcctaact 8704487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 14913000 - 14912968
Alignment:
Q  156 ttcggattatataatccgaagtgtatcagcaca 188  Q
    ||||||||||| |||||||||||||||||||||    
T  14913000 ttcggattatacaatccgaagtgtatcagcaca 14912968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 223; Significance: 1e-122; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 4 - 338
Target Start/End: Complemental strand, 3304971 - 3304638
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa-tagggcgcgttacatgatgtttcc 102  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| | |||||||||| |||||    
T  3304971 tgttttcctttgttatagggtgaaaaatggagttacggatttttccggattttgtaatccagaaacttcaaaaaaatagggtgtgttacatgatatttcc 3304872  T
Q  103 cgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacata 201  Q
     ||||||||||||| ||||||||| |||||||||||| ||||||       ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3304871 ggattacataatccaaaaaccccccaaacacccttttctaaggtaaaa---tagttcggattatataatccgaactgtatcagcacaaatcctaaacata 3304775  T
Q  202 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 301  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||| |||||||||||||||||||| |    
T  3304774 tttgtaacatgtataaccattttagggacaatattaatcttcctaactcttatcattttgttttgggtcattgttacctgttcttagtcaaaaatcgggt 3304675  T
Q  302 tttcgggctacttgatcggattgctctaaaacttccc 338  Q
    | ||||||||||||||||||||||||| |||||||||    
T  3304674 tctcgggctacttgatcggattgctctgaaacttccc 3304638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 4 - 339
Target Start/End: Original strand, 47202441 - 47202767
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||| | |||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  47202441 tgttttcttttgttatagggtgaaaaatggagttacggatttttccagattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccg 47202540  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    |||||||||||||| |||||||| |||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  47202541 gattacataatccggaaaccccctaaacacccttttttaaggtaaaa---tagttcggattatataatccgaactgtatcagcacaaatcctaaacatat 47202637  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 302  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||       | ||||||||||||||||||| ||    
T  47202638 ttgtaacatgtatagccgttttagggacaatattaatcttcctaactcttatccttttgttttgggtca-------tcgttcttagtcaaaaatcgggtt 47202730  T
Q  303 ttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  47202731 ttcgggctacttgattggattgctcttaaacttcccc 47202767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 23 - 338
Target Start/End: Original strand, 8154865 - 8155178
Alignment:
Q  23 gtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaac 122  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8154865 gtgaaaaatgaagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgaaaac 8154964  T
Q  123 cccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccat 221  Q
    |||| |||||||||||||||||||       |||||||||||||||||||  || | |||||||||||||||||||||||||||||||||||||||||||    
T  8154965 cccctaaacacccttttttaaggtaaaa---tagttcggattatataatctaaactctatcagcacaaatcctaaacatatttgtaacatgtatagccat 8155061  T
Q  222 tttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcgga 321  Q
    |||||||||||||| |||||||||| ||||||||||||| |||| ||||||| |||| |||||||||||||||||||| ||||||| ||||||||||| |    
T  8155062 tttagggacaatatcaatcttcctagctcttatccttttgtttttggtcattattacctgttcttagtcaaaaatcgggttttcggactacttgatcgaa 8155161  T
Q  322 ttgctctaaaacttccc 338  Q
    ||| ||| |||||||||    
T  8155162 ttgttctgaaacttccc 8155178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 4 - 337
Target Start/End: Original strand, 31642988 - 31643318
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||| | |||| |||||||||||||||||||||||||||||| |||| |||||||  |||||||||||||||||||| | ||||||||||||||||     
T  31642988 tgttttcgtttgttatagggtgaaaaatggagttacggatttttctggatcttgtaatttggaaacttcaaaaaatagggtgtgttacatgatgtttccg 31643087  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    |||||||||||||| |||||||| |||||||||||||||||||       ||||||||||||||||||| ||| || ||||||| |||||||||||||||    
T  31643088 gattacataatccggaaaccccccaaacacccttttttaaggtaaaa---tagttcggattatataatctgaactggatcagcataaatcctaaacatat 31643184  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 302  Q
    || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||  |    
T  31643185 ttttaacatgtatagctattttagggacaatattaatcttcctaactcttatccttttgttttgggtcattgttacatgttcttagtcaaaaatcgg-gt 31643283  T
Q  303 ttcgggctacttgatcggattgctctaaaacttcc 337  Q
    ||||| |||||||||||||||||||| ||||||||    
T  31643284 ttcggactacttgatcggattgctctgaaacttcc 31643318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 4 - 327
Target Start/End: Complemental strand, 42925853 - 42925531
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |     
T  42925853 tgttttcctttgttatagggtgaaaaatggagttacgggtttttcctgattttgtaatccggaaacttcaaaaaatagggcgcattacatgatgttttcg 42925754  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    |||||||||||||| |||||||| ||||||| ||||| |||||        ||||||||||||||||| |||| ||||||||||||||| |||||||| |    
T  42925753 gattacataatccggaaaccccctaaacaccttttttcaaggtaaaac---agttcggattatataatacgaactgtatcagcacaaattctaaacatgt 42925657  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggat 301  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||    |||||| ||||| |||||||||||||||||||||| || |    
T  42925656 ttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttccgtttttggatcattgttacttgttcttagtcaaaaattgggt 42925557  T
Q  302 tttcgggctacttgatcggattgctc 327  Q
    ||||||||||||||||||||||||||    
T  42925556 tttcgggctacttgatcggattgctc 42925531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 3936052 - 3936388
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||  || ||||||||  |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3936052 tgatgttttcttttgttaaagagtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 3936151  T
Q  101 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
    || ||||||||||||| ||||||||| ||||||||||||| |||||        ||| || ||||||||||||||| ||||| |||||||||  ||||||    
T  3936152 ccggattacataatccaaaaaccccctaaacaccctttttcaaggtaaaac---agtccgaattatataatccgaaatgtattagcacaaattgtaaaca 3936248  T
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 299  Q
    | ||||||||||| |||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||| | ||||||||||||||||||    
T  3936249 tgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcatccttctattttgggtcattgttacctattcttagtcaaaaatcgg 3936348  T
Q  300 attttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    |||||||| || ||||||||||||||||  ||||||||||    
T  3936349 attttcggactgcttgatcggattgctccgaaacttcccc 3936388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 22 - 339
Target Start/End: Complemental strand, 36468730 - 36468416
Alignment:
Q  22 ggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaa 121  Q
    |||||||||  |||| ||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||  |||||||||||||| |||    
T  36468730 ggtgaaaaaatgagtaacggatttttccggattttgtaatatggaaacttcaaaaaatagggcgtgttacatgatgtttca-gattacataatccggaaa 36468632  T
Q  122 ccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagcca 220  Q
    ||||| ||||||||||||| |||||        |||| | ||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||    
T  36468631 ccccctaaacaccctttttcaaggtaaaac---agtttgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtca 36468535  T
Q  221 ttttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcgg 320  Q
    ||||||| ||||||||||||||| ||||||| |||||| | |||||||||||| |||| |||||||||| ||||||||| ||||||||||||||||||||    
T  36468534 ttttaggaacaatattaatcttcataactctcatccttctgttttgggtcattgttacatgttcttagtaaaaaatcgggttttcgggctacttgatcgg 36468435  T
Q  321 attgctctaaaacttcccc 339  Q
    |||||||  ||||||||||    
T  36468434 attgctccgaaacttcccc 36468416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 20 - 307
Target Start/End: Complemental strand, 28230663 - 28230379
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 119  Q
    ||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |    
T  28230663 agggtaaaaaatg-agtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacttgatgtttccggattacataatccgga 28230565  T
Q  120 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 218  Q
    ||||||| ||||||||||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| ||||     
T  28230564 aaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagt 28230468  T
Q  219 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgg 307  Q
    ||||||| ||||||||||||||||||||||||| |||||| | |||||||||||| || | ||||||||||||||| |||| |||||||    
T  28230467 cattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgttgcatgttcttagtcaaaattcgggttttcgg 28230379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 4 - 258
Target Start/End: Complemental strand, 24042400 - 24042148
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| || | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  24042400 tgttttcctttgatatagggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaataaggcgcgttacatgatgtttccg 24042301  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    |||||||||||||| |||||||| ||||||| ||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||| |    
T  24042300 gattacataatccggaaaccccctaaacaccatttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacatgt 24042204  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 258  Q
    |||||||||  |||| ||||||||||||||||| ||||||||||||||| ||||||    
T  24042203 ttgtaacattgatagtcattttagggacaatatcaatcttcctaactctcatcctt 24042148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 14 - 339
Target Start/End: Complemental strand, 33574236 - 33573922
Alignment:
Q  14 tgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataa 113  Q
    |||| ||| |||||||||| ||||| ||||||||  |||||||||||||||||||||| ||||||||||| |||||||||||||||| | ||||||||||    
T  33574236 tgttatagagtgaaaaatgaagttatggatttttttggattttgtaatccggaaactttaaaaaatagggtgcgttacatgatgttttcggattacataa 33574137  T
Q  114 tccgaaaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgt 213  Q
    ||||||||||||         |||||||||||       ||||||| ||||||||||| ||| ||||| |||||||||| ||||||||||||||||||||    
T  33574136 tccgaaaacccca--------ttttttaaggtaaaa---tagttcgaattatataatctgaactgtatgagcacaaatcataaacatatttgtaacatgt 33574048  T
Q  214 atagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctact 313  Q
    ||| | ||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| |||| |||| ||| |||||||| || ||||||  |||||    
T  33574047 ataactattttagggacaatattaatctttctaactcttatccttttgttttgagtcattgttacatgtttttaatcaaaaattgggttttcgaactact 33573948  T
Q  314 tgatcggattgctctaaaacttcccc 339  Q
    ||||||||||||||| ||||||||||    
T  33573947 tgatcggattgctctgaaacttcccc 33573922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 20 - 339
Target Start/End: Original strand, 36629168 - 36629483
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 119  Q
    |||||||||||  |||| ||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||| |||||||||||| | |    
T  36629168 agggtgaaaaaatgagtaacggatttttccggattttgtaatctggtaacttaaaaaaatagggcgcgttacatgatgtttccggattacataatctgga 36629267  T
Q  120 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 218  Q
    ||||| | ||||||| |||||||||||        |||||||||||||||||||||| ||||||||| |||||  ||||||| ||||| ||||||   |     
T  36629268 aaccctctaaacaccattttttaaggtaaaac---agttcggattatataatccgaactgtatcagcgcaaattttaaacatgtttgttacatgtc--gt 36629362  T
Q  219 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 318  Q
    ||||||||||| ||||||||||||||||||||| |||||| | |||||| ||| | |||| || ||||||||||||||||| ||||||||||||||||||    
T  36629363 cattttagggagaatattaatcttcctaactctcatccttctgttttggctcactgttacctggtcttagtcaaaaatcgggttttcgggctacttgatc 36629462  T
Q  319 ggattgctctaaaacttcccc 339  Q
    |||||||||  ||||||||||    
T  36629463 ggattgctccgaaacttcccc 36629483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 33 - 336
Target Start/End: Original strand, 36408347 - 36408648
Alignment:
Q  33 gagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaaca 131  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||| |||||||||||||| ||||| |  |||||    
T  36408347 gagtaacggatttttccggattttgtaatccagaaacttcaaaaaataaggcgcgatacatgatgtttccggattacataatccggaaacctcataaaca 36408446  T
Q  132 cccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggaca 231  Q
    || | ||| |||||        |||||| ||||||||||||||| ||||||||||||||| |||||||| ||||||||||| ||||  ||||||||||||    
T  36408447 ccatctttcaaggtaaaac---agttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtaattttagggaca 36408543  T
Q  232 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaa 331  Q
    |||||||||||| |||||||  | ||| | |||||||||||| |||| |||||||||||||||||  | ||||||| |||||||||||||||||||  ||    
T  36408544 atattaatcttcttaactctctttcttctgttttgggtcattgttacgtgttcttagtcaaaaatttggttttcggactacttgatcggattgctccgaa 36408643  T
Q  332 acttc 336  Q
    |||||    
T  36408644 acttc 36408648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 19225814 - 19225477
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggattttt-ccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtt 99  Q
    |||||||||| | ||||  |||||||||||  |||| |||||||||| ||||||||||||||||  |||||||||||||||||| |||||||||||||||    
T  19225814 tgatgttttcttttgttaaagggtgaaaaaatgagtaacggattttttccggattttgtaatccaaaaacttcaaaaaatagggtgcgttacatgatgtt 19225715  T
Q  100 tcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaac 198  Q
    ||| |||||||||||||| ||| |||| ||||||| ||||| ||| |        | |||||||||||||||| |||  |||||||||||||| ||||||    
T  19225714 tccggattacataatccggaaatcccctaaacaccatttttcaagataaaac---aattcggattatataatctgaacggtatcagcacaaattctaaac 19225618  T
Q  199 atatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcg 298  Q
    || ||||||||||| |||  ||||||| |||  |||| ||||||||||||||| |||||| | |||||||||||| ||||   ||||||||||||||||     
T  19225617 atgtttgtaacatggatattcattttatggatgatataaatcttcctaactctcatccttctgttttgggtcattgttacccattcttagtcaaaaatca 19225518  T
Q  299 gattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    | ||||||| ||| |||||||||||||||  ||||||||||    
T  19225517 ggttttcggactatttgatcggattgctccgaaacttcccc 19225477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 20 - 337
Target Start/End: Original strand, 9151777 - 9152074
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 119  Q
    |||||||||||  |||| || | ||||||||||||||||||||||||||||||||||||||||||||                  ||||||||||||| |    
T  9151777 agggtgaaaaaatgagtaacaggtttttccggattttgtaatccggaaacttcaaaaaatagggcgc------------------attacataatccgga 9151858  T
Q  120 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 218  Q
    ||||||| ||||| ||||||| |||||        ||| | |||||||||||||||| ||||||||||||||| |||||||| ||||||||||| ||||     
T  9151859 aaccccctaaacatcctttttcaaggtaaaac---agtccagattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagt 9151955  T
Q  219 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 318  Q
    ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||| ||||||||| |||| || ||||||||||    
T  9151956 cattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttagtaaaaaatcgggtttttggactacttgatc 9152055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 20 - 280
Target Start/End: Complemental strand, 37518491 - 37518233
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 119  Q
    |||||||||||   ||| ||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||| |||||| |||||||||||||| |    
T  37518491 agggtgaaaaaataagtaacggatttttccggattttataatccagaaacttcaaaaaatagggcgtgttacatgaagtttccggattacataatccgga 37518392  T
Q  120 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 218  Q
    ||||||| ||||||| ||||| |||||        |||||||||||||||||||||| |||||||||| |||| |||||||| |||||||||   ||||     
T  37518391 aaccccctaaacaccatttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcataaattctaaacatgtttgtaacagagatagt 37518295  T
Q  219 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttactt 280  Q
    ||||||||| ||| ||||||||||||||||||| |||||| | |||| ||||||| ||||||    
T  37518294 cattttaggaacactattaatcttcctaactctcatccttctgttttaggtcattgttactt 37518233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 158 - 339
Target Start/End: Complemental strand, 42865162 - 42864981
Alignment:
Q  158 cggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 257  Q
    |||||||||||||||||| ||||||||||||||| ||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||    
T  42865162 cggattatataatccgaactgtatcagcacaaattctaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcct 42865063  T
Q  258 tttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    | | |||||||||||| | || ||||||| |||||||||| | ||||||| |||||||||||||||||||| |||| |||||    
T  42865062 tctgttttgggtcattgtcacctgttcttggtcaaaaatcaggttttcggactacttgatcggattgctctgaaacatcccc 42864981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 51 - 323
Target Start/End: Original strand, 33151200 - 33151467
Alignment:
Q  51 gattttgtaatccggaaacttcaaaaaa-tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccc-ttttttaaggtnn 147  Q
    ||||||||||| ||||||||| |||||| |||||||| ||| ||||||| | | |||||||||||||| ||| |||| |||||| | |||||||||||      
T  33151200 gattttgtaattcggaaacttaaaaaaaatagggcgcattatatgatgtcttcggattacataatccggaaatcccctaaacactcattttttaaggtaa 33151299  T
Q  148 nnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 247  Q
          ||||||||||||||||| |||| ||||||||||||||| |||||||| ||||||||||| ||||     |||||||||||||||||||||||||    
T  33151300 aac---agttcggattatataattcgaactgtatcagcacaaattctaaacatgtttgtaacatgaatag-----ttagggacaatattaatcttcctaa 33151391  T
Q  248 ctcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 323  Q
    |||| |||||| |||||||||||||| |||  ||||||||||||||||| || ||||| | |||||||||||||||    
T  33151392 ctctcatccttctattttgggtcattgttatctgttcttagtcaaaaattgggttttctgactacttgatcggatt 33151467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 51 - 335
Target Start/End: Complemental strand, 31985685 - 31985400
Alignment:
Q  51 gattttgtaatccggaaacttcaaaaaa--tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnn 147  Q
    |||||||||||||| |||| ||||||||  |||||||||||||||||| ||| | ||||||||||| |||| |||||  ||||||| ||||| ||||       
T  31985685 gattttgtaatccgaaaacctcaaaaaaaatagggcgcgttacatgattttttcggattacataattcgaacaccccttaaacaccatttttcaaggggg 31985586  T
Q  148 nnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 247  Q
          ||||||||||||||||| |||| ||||||| |||||||  ||||||||||| ||||||| |||| ||||||| |||||||||||||||| ||||    
T  31985585 aaac--agttcggattatataattcgaactgtatcaacacaaattttaaacatatttttaacatgaatagtcattttatggacaatattaatctttctaa 31985488  T
Q  248 ctcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 335  Q
    |||| ||| || | |||||||||||| |||   ||||||||||||||||| | |||| ||||||||||||| ||||| || |||||||    
T  31985487 ctctcatcattctgttttgggtcattgttaaccgttcttagtcaaaaatctggtttttgggctacttgatcagattgttccaaaactt 31985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 154 - 327
Target Start/End: Original strand, 1518802 - 1518975
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    |||||||||||||||||||||| |||||||||||||||  ||||||| ||||||||||  |||  ||||||| ||||||||||||||||| ||||||| |    
T  1518802 agttcggattatataatccgaactgtatcagcacaaattataaacatgtttgtaacatcgataatcattttatggacaatattaatcttcttaactctca 1518901  T
Q  254 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    ||||| |||||||||| ||| |||  |||||||||| |||||| || ||||||| |||||||||||||||||||    
T  1518902 tccttctattttgggttattgttagctgttcttagtaaaaaatagggttttcggactacttgatcggattgctc 1518975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 56 - 336
Target Start/End: Complemental strand, 24690494 - 24690215
Alignment:
Q  56 tgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccc-caaacacccttttttaaggtnnnnnnnta 154  Q
    ||||||||||||||||||||||||||||| |  ||  |||| ||| | ||||| | |||||||| ||||| |||||||||||||| ||||         |    
T  24690494 tgtaatccggaaacttcaaaaaatagggctcactatttgattttttcagattatacaatccgaacacccctcaaacaccctttttcaagggaaaaac--a 24690397  T
Q  155 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttat 254  Q
    | | ||||||||||||| ||| |||||||||| ||||  ||| ||| ||||||||||| || | ||||||| ||||||||||||||| ||||||||| ||    
T  24690396 gat-ggattatataatctgaactgtatcagcataaattttaagcatgtttgtaacatggatcgtcattttatggacaatattaatctacctaactctcat 24690298  T
Q  255 ccttttattttgggtcattcttacttgttcttagtcaaaaatcgga-ttttcgggctacttgatcggattgctctaaaacttc 336  Q
    |||||| |||||||||||| ||||  |||||||||||| ||||||| |||||||||||||||||||||||||||  |||||||    
T  24690297 ccttttgttttgggtcattgttacccgttcttagtcaataatcggatttttcgggctacttgatcggattgctccgaaacttc 24690215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 395 - 564
Target Start/End: Complemental strand, 18658162 - 18657990
Alignment:
Q  395 gagaagcttcaaagcaacgaaaaa--tattgagtgatgaatgatgc-gaattagattgctccgtctcttgattttgagagaacatacgagaatttattaa 491  Q
    ||||||||||||||||| |||| |  | |||||||||||||||||  || ||||||| || |||||||||||||||||||||| |||||  ||| |||||    
T  18658162 gagaagcttcaaagcaatgaaagagtttttgagtgatgaatgatgttgagttagattacttcgtctcttgattttgagagaacgtacgatgattgattaa 18658063  T
Q  492 ccttcattatttatctttgcaaataatcttatatttgatcaataaacttgggtgaaagttgatttagaattga 564  Q
    ||| |||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||    
T  18658062 cctacattctttatctttgcaaataatcttatatctgatcaataaacttaggtgaaagttgatgtagaattga 18657990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 179 - 327
Target Start/End: Original strand, 19818500 - 19818648
Alignment:
Q  179 tatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttac 278  Q
    ||||||||||||||||||||||  |||||||||| ||||  |||||||||||||||||||||||||||||||| |||||| | |||||||||||| ||||    
T  19818500 tatcagcacaaatcctaaacatgcttgtaacatggatagttattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttac 19818599  T
Q  279 ttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
     ||||||| ||| |||||||| |||| || |||||||||||||||||||    
T  19818600 ctgttcttggtcgaaaatcgggtttttggactacttgatcggattgctc 19818648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 43737087 - 43737207
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 119  Q
    |||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |    
T  43737087 agggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttttcggattacataatccgga 43737186  T
Q  120 aaccccc-aaacacccttttt 139  Q
    ||||||| |||||||||||||    
T  43737187 aaccccctaaacacccttttt 43737207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 156 - 339
Target Start/End: Complemental strand, 36946353 - 36946171
Alignment:
Q  156 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 255  Q
    |||||||||||||| ||||| ||||||||||||||| || || || ||||||||||| |||  ||||||| | |||||||||| |||||||||||| |||    
T  36946353 ttcggattatataacccgaactgtatcagcacaaattctgaatatgtttgtaacatgaataatcattttaag-acaatattaagcttcctaactctcatc 36946255  T
Q  256 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||||| |||||||||||| ||| ||||| |||||||||| || | |||||||| |||||||||| ||||||   ||||||||||    
T  36946254 cttttgttttgggtcattgttagttgttattagtcaaaattctggttttcgggatacttgatcgaattgcttcgaaacttcccc 36946171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 214 - 327
Target Start/End: Original strand, 43737237 - 43737350
Alignment:
Q  214 atagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctact 313  Q
    |||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||| ||||| ||| |||||||||||||    
T  43737237 atagtcattttagggacaatattaatcttcctaactctgatccttatgttttgggtcattgttacatgttcttagttaaaaaccgggttttcgggctact 43737336  T
Q  314 tgatcggattgctc 327  Q
    ||||||||||||||    
T  43737337 tgatcggattgctc 43737350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 206 - 337
Target Start/End: Complemental strand, 7115282 - 7115151
Alignment:
Q  206 taacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttc 305  Q
    ||||||| ||| ||| |||| ||||||||||||||||  ||||||| |||||| |||||| ||||||| ||| ||||||||||||||||||||  |||||    
T  7115282 taacatggataaccaatttatggacaatattaatcttgataactctcatccttctatttttggtcattgttagttgttcttagtcaaaaatcgtgttttc 7115183  T
Q  306 gggctacttgatcggattgctctaaaacttcc 337  Q
    |||||||||||||| |||||||| ||||||||    
T  7115182 gggctacttgatcgtattgctctgaaacttcc 7115151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 153 - 296
Target Start/End: Original strand, 5278358 - 5278501
Alignment:
Q  153 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 252  Q
    ||||||||||||||||||| ||| ||||| |||| ||||  | ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||||||    
T  5278358 tagttcggattatataatctgaactgtattagcataaattttgaacatgtttgtaacatggatagtcattttaaggataatattaatcttcctaactctt 5278457  T
Q  253 atccttttattttgggtcattcttacttgttcttagtcaaaaat 296  Q
    |||||| | |||||||||||| |||   ||||||||||| ||||    
T  5278458 atccttctgttttgggtcattgttagccgttcttagtcacaaat 5278501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 160 - 338
Target Start/End: Complemental strand, 6467198 - 6467020
Alignment:
Q  160 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 259  Q
    |||||||||||||||| | ||||| ||||| | |||||||| ||||||| ||| ||||  |||||| || |||||||||| |||||||||||  |||||     
T  6467198 gattatataatccgaactatatcaacacaagttctaaacatgtttgtaatatggatagttattttaagggcaatattaattttcctaactctcttccttc 6467099  T
Q  260 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 338  Q
    |||||| ||||||| |||  |||||||||| ||||||  | | ||| |||||||||||||||||| ||| ||| |||||    
T  6467098 tattttaggtcattgttagctgttcttagttaaaaatttggtattccggctacttgatcggattgttctgaaatttccc 6467020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 26555128 - 26555040
Alignment:
Q  247 actcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 335  Q
    ||||| |||||| |||||||||||||| |||| |||||||||| ||||| ||| |||||||||||||||||||||||||||| ||||||    
T  26555128 actctcatccttctattttgggtcattgttacatgttcttagtaaaaaaacgggttttcgggctacttgatcggattgctctgaaactt 26555040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 6467643 - 6467839
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaa--tccggaaacttcaaaaaatagggcgcgttacatgatgtttc 101  Q
    ||||||||| ||||  | ||||||||||| ||||||||||||||||| ||| |||||  ||| ||||  ||||||||||||| | |||||||||| | |     
T  6467643 tgttttcctttgttaaatggtgaaaaatg-agttacggatttttccgaattatgtaaaatccagaaatctcaaaaaatagggtgtgttacatgatttgtt 6467741  T
Q  102 ccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacat 200  Q
    | |||||||||||||||| |||||| ||||||||||||| ||||         |||||||||||||||||||||| |||||||||| ||||  |||||||    
T  6467742 cggattacataatccgaacaccccctaaacaccctttttcaagg--gaaaaacagttcggattatataatccgaactgtatcagcataaattttaaacat 6467839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 42877260 - 42877149
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||  |||||||||||  |||| |||  |||||||||||||||||||| ||||| |  ||||||||||||||||||||| ||||||    
T  42877260 tgatgttttcttttgttaaagggtgaaaaaatgagtaacgtgtttttccggattttgtaatcgggaaaataaaaaaaatagggcgcgttacataatgttt 42877161  T
Q  101 cccgattacata 112  Q
    || |||||||||    
T  42877160 ccggattacata 42877149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 154 - 287
Target Start/End: Complemental strand, 16983806 - 16983673
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    |||||||||||||||||| ||| |||||||||||||||  |     | ||||||||||| ||| ||| ||||  |||||||||||||||||||||||| |    
T  16983806 agttcggattatataatctgaattgtatcagcacaaattttgggtctgtttgtaacatggataaccagtttacagacaatattaatcttcctaactctca 16983707  T
Q  254 tccttttattttgggtcattcttacttgttctta 287  Q
    ||||| |||||| ||||||| |||  ||||||||    
T  16983706 tccttctatttttggtcattattagctgttctta 16983673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 161 - 327
Target Start/End: Complemental strand, 48776268 - 48776100
Alignment:
Q  161 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-- 258  Q
    |||||||||||| || | ||| |||||||||  | ||||| ||| ||||||| ||||  |||||| ||| ||||||||||||||||||||| || | |      
T  48776268 attatataatccaaattatattagcacaaattttgaacatgtttataacatggatagtgattttaaggataatattaatcttcctaactctcatgcatag 48776169  T
Q  259 ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    | ||||| |||||||  || ||||||||||||||||||  |||||||| ||||||| ||| ||||||||    
T  48776168 tcattttaggtcattgctagttgttcttagtcaaaaatttgattttcgagctacttaatcagattgctc 48776100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 249
Target Start/End: Original strand, 48775705 - 48775798
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 249  Q
    |||| ||||||||||||||||| |||||  ||||||||  |||||||  |||||||||| |||| || |||| |||||||||||||||||||||||    
T  48775705 agttaggattatataatccgaactgtat--gcacaaattttaaacatgcttgtaacatgaatagtcagtttaaggacaatattaatcttcctaact 48775798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 37398877 - 37398771
Alignment:
Q  232 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaa 331  Q
    |||||||||||||||||||| ||| || | |||| ||||||| ||| ||||||||||| ||||||  | ||||  |||||||||||| ||||||||  ||    
T  37398877 atattaatcttcctaactctcatcattctgttttaggtcattgttagttgttcttagtaaaaaattcggtttttaggctacttgatcagattgctccgaa 37398778  T
Q  332 acttccc 338  Q
    |||||||    
T  37398777 acttccc 37398771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 156 - 318
Target Start/End: Complemental strand, 48706061 - 48705899
Alignment:
Q  156 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 255  Q
    ||||| |||||||||| ||| |||||||||||| || |||| | ||||| ||||| | ||| | | |||| | || |||||||||||||||||||  |||    
T  48706061 ttcggtttatataatctgaactgtatcagcacagattctaagcctatttttaacacggataactagtttaagtaccatattaatcttcctaactcggatc 48705962  T
Q  256 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 318  Q
     || | |||| ||||||| ||  ||||||| ||| ||||||   |||||||||||||||||||    
T  48705961 tttatgttttaggtcattgtttattgttctcagtaaaaaattcaattttcgggctacttgatc 48705899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 273
Target Start/End: Original strand, 43185887 - 43185996
Alignment:
Q  164 atataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatt 263  Q
    ||||||||| || |||||||||||||||  ||||||| ||| ||||||| |||  ||||||  ||||||||||||  ||||||||||| || ||| ||||    
T  43185887 atataatccaaactgtatcagcacaaattttaaacatgtttataacatggataatcattttttggacaatattaacattcctaactctcatacttatatt 43185986  T
Q  264 ttgggtcatt 273  Q
    || |||||||    
T  43185987 ttaggtcatt 43185996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 339
Target Start/End: Original strand, 39581840 - 39582019
Alignment:
Q  160 gattatataatccgaagtgtatcagcaca--aatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 257  Q
    |||||||||||||||| ||||||||||||  |||  |||   | ||||||||||| ||| ||| ||||  |||  ||||||||||| ||||||| || ||    
T  39581840 gattatataatccgaactgtatcagcacacaaattataagtttgtttgtaacatgaataaccaatttaaagac--tattaatcttcataactctcattct 39581937  T
Q  258 tttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    | | |||| ||||||| ||| || ||||| |||||||||| | |||| |||||||||||||  ||||||  |||| ||||||    
T  39581938 tctgttttaggtcattgttagttattcttcgtcaaaaatccggtttttgggctacttgatcatattgcttaaaaaattcccc 39582019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 43 - 126
Target Start/End: Complemental strand, 26555214 - 26555131
Alignment:
Q  43 tttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc 126  Q
    ||||| |||||||||||||||| | |   ||||||||||||||||||||||||| |||   |||||| ||||||||| ||||||    
T  26555214 ttttttcggattttgtaatccgaatatcacaaaaaatagggcgcgttacatgatttttttggattacctaatccgaacaccccc 26555131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 28346123 - 28346173
Alignment:
Q  33 gagttacggatttttccggattttgtaatccggaaacttcaaaaaataggg 83  Q
    ||||||||||| |||||| |||||||||||| ||||||||||||| |||||    
T  28346123 gagttacggatgtttccgaattttgtaatccagaaacttcaaaaagtaggg 28346173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 154 - 251
Target Start/End: Complemental strand, 8214354 - 8214257
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactct 251  Q
    |||||||||||  |||| | || || |||| ||| ||| || ||||| |||| |||||| |||| |||| || |||||||||||||||||||||||||    
T  8214354 agttcggattacgtaattcaaactgcatcaacaccaattctgaacatgtttgcaacatggatagtcattctaaggacaatattaatcttcctaactct 8214257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 196 - 257
Target Start/End: Complemental strand, 8214523 - 8214462
Alignment:
Q  196 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 257  Q
    ||||| ||||||||||  || | ||||||| ||||||||||||||||||||||||| |||||    
T  8214523 aacatgtttgtaacatcgattgtcattttaaggacaatattaatcttcctaactctcatcct 8214462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 266 - 339
Target Start/End: Complemental strand, 37518215 - 37518142
Alignment:
Q  266 gggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    |||||||| |||| |||||||||| |||||| || |||| || ||| |||||||||||||||  ||||||||||    
T  37518215 gggtcattgttacctgttcttagttaaaaattgggtttttggactatttgatcggattgctccgaaacttcccc 37518142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 578 - 607
Target Start/End: Complemental strand, 21123110 - 21123081
Alignment:
Q  578 taagttcccttttctctttatctttgtgtt 607  Q
    ||||||||||||||||||||||||||||||    
T  21123110 taagttcccttttctctttatctttgtgtt 21123081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 285 - 337
Target Start/End: Complemental strand, 47239622 - 47239570
Alignment:
Q  285 ttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 337  Q
    ||||||||||||| |||||||||  ||||||||| ||||||||  ||||||||    
T  47239622 ttagtcaaaaatctgattttcggagtacttgatcagattgctccgaaacttcc 47239570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 220; Significance: 1e-121; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 4 - 339
Target Start/End: Complemental strand, 2358835 - 2358501
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa-tagggcgcgttacatgatgtttcc 102  Q
    ||||||||| |||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  2358835 tgttttcctttgttatagggtgaaaaatggagttacggattttcctggattttgtaatccggaaacttcaaaaaaatagggcgtgttacatgatgtttcc 2358736  T
Q  103 cgattacataatccgaaaaccc-ccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacata 201  Q
     | |||||||||||| |||||| |||||||||||||||||||||       ||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  2358735 ggcttacataatccggaaaccctccaaacacccttttttaaggtaaaa---tagttcggattatataatccgaactgtatcagcataaatcctaaacata 2358639  T
Q  202 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || | | |||||||||||||||||| |    
T  2358638 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttgttttgggtcattgttgcatattcttagtcaaaaatcgggt 2358539  T
Q  302 tttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||| |||||||||||||| |||||||| ||||||||||    
T  2358538 ttttgggctacttgatcgaattgctctgaaacttcccc 2358501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 4 - 335
Target Start/End: Original strand, 47301966 - 47302294
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||     
T  47301966 tgttttcctttgttatagggtgaaaaatggagttatggatttttccggattttgtaatccggaaacttaaaaaaataaggcgcgttacatgatgtttccg 47302065  T
Q  104 gattacataatccgaaaaccccc-aaacaccctttttt-aaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacata 201  Q
    |||||||||||||||||||| || |||||||||||||| |||||       ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  47302066 gattacataatccgaaaacctcctaaacaccctttttttaaggtaaaa---tagttcggattatataatccgaactgtatcagcacaaatcctaaacata 47302162  T
Q  202 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 301  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||| |||||||||||| |||| |||||||||||||||||||  |    
T  47302163 tttgtaacatgtatagccatttta-ggacaatattaatatt-ctaactcttatccttttgttttgggtcattgttacatgttcttagtcaaaaatcgagt 47302260  T
Q  302 tttcgggctacttgatcggattgctctaaaactt 335  Q
    ||||||||||||||||||||||| ||| ||||||    
T  47302261 tttcgggctacttgatcggattgttctgaaactt 47302294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 6 - 339
Target Start/End: Original strand, 50716201 - 50716533
Alignment:
Q  6 ttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccga 105  Q
    ||||||| |||| ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||    
T  50716201 ttttcctttgttatagggtgaaaaatggagttacgggttttttcggattttgtaatccgaaaacttcaaaaaatagggcgtgttacatgatgtttccaga 50716300  T
Q  106 ttacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatattt 204  Q
    |||||||||||| |||||||| ||||||||||||| |||||        | |||||||||||||||| ||| ||||||||||||||| |||||||| |||    
T  50716301 ttacataatccggaaaccccctaaacaccctttttcaaggtaaaac---aattcggattatataatctgaactgtatcagcacaaattctaaacatgttt 50716397  T
Q  205 gtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattt 303  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||| ||| ||    |||||||||||| ||||||||||||||||||||||||| |||    
T  50716398 gtaacatgaatagtcattttagggacaatattaatcttcctaactctcatcattccgtttttgggtcattgttacttgttcttagtcaaaaatcgggttt 50716497  T
Q  304 tcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||||||||||||||||||||||||  ||||||||||    
T  50716498 tcgggctacttgatcggattgctccgaaacttcccc 50716533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 6 - 339
Target Start/End: Complemental strand, 50796646 - 50796314
Alignment:
Q  6 ttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccga 105  Q
    ||||||| |||| ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||    
T  50796646 ttttcctttgttatagggtgaaaaatggagttacgggttttttcggattttgtaatccgaaaacttcaaaaaatagggcgtgttacatgatgtttccaga 50796547  T
Q  106 ttacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatattt 204  Q
    |||||||||||| |||||||| ||||||||||||| |||||        | |||||||||||||||| ||| ||||||||||||||| |||||||| |||    
T  50796546 ttacataatccggaaaccccctaaacaccctttttcaaggtaaaac---aattcggattatataatctgaactgtatcagcacaaattctaaacatgttt 50796450  T
Q  205 gtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattt 303  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||| ||| ||    |||||||||||| ||||||||||||||||||||||||| |||    
T  50796449 gtaacatgaatagtcattttagggacaatattaatcttcctaactctcatcattccgtttttgggtcattgttacttgttcttagtcaaaaatcgggttt 50796350  T
Q  304 tcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||||||||||||||||||||||||  ||||||||||    
T  50796349 tcgggctacttgatcggattgctccgaaacttcccc 50796314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 67 - 339
Target Start/End: Complemental strand, 43473118 - 43472848
Alignment:
Q  67 aacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattat 165  Q
    |||||||||||||| || || ||||||||||||||| |||||||||||||| |||||||| ||||||| |||||||||||       ||||||| |||||    
T  43473118 aacttcaaaaaatatggtgcattacatgatgtttccggattacataatccggaaaccccctaaacaccattttttaaggtaaaa---tagttcgaattat 43473022  T
Q  166 ataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatttt 265  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  43473021 ataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggacaatattaatcttcctaactcttatccttttgtttt 43472922  T
Q  266 gggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    |||||||| |||  |||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  43472921 gggtcattgttatctgttcttagtcaaaaatcgggttttcgggctacttgatcggattactctgaaacttcccc 43472848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 4 - 327
Target Start/End: Complemental strand, 3903018 - 3902697
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| ||||||||||| ||||||||| | |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||       
T  3903018 tgttttcctttgttatagggtgaaaagtggagttactggtttttccggattttgtaatccgaaaacttcaaaaaatagagcgcgttacatgatgtttttg 3902919  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    |||||||||||||| |||||||| ||||||||||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||| |    
T  3902918 gattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacatgt 3902822  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 302  Q
    |||||||||| ||   ||||||| ||||||||||||||||| ||||||| |||||| |  ||||||||||| |||| |||||||||||||||||||| ||    
T  3902821 ttgtaacatggatgatcattttatggacaatattaatcttcataactctcatccttctgctttgggtcattgttacatgttcttagtcaaaaatcgggtt 3902722  T
Q  303 ttcgggctacttgatcggattgctc 327  Q
    ||| |  ||||||||||||||||||    
T  3902721 ttcagattacttgatcggattgctc 3902697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 49 - 339
Target Start/End: Original strand, 52777223 - 52777511
Alignment:
Q  49 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttt-aaggtn 146  Q
    ||||||||||||||||||||||||||||| ||| || | ||||||||||||||| |||||||||||  | |||||||| |||||||||||||| |||||     
T  52777223 cggattttgtaatccggaaacttcaaaaa-tagagcactttacatgatgtttccggattacataataaggaaaccccctaaacacccttttttcaaggta 52777321  T
Q  147 nnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttccta 246  Q
           |||||||||||||||||  ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  52777322 aaac---agttcggattatataatttgaactgtatcagcacaaattctaaacatgtttgtaacatgtatagccattttagggacaatattaatcttctta 52777418  T
Q  247 actcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    |||||||||||||| ||||||||||||  ||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  52777419 actcttatccttttgttttgggtcattgctacatgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 52777511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 38 - 338
Target Start/End: Original strand, 35142055 - 35142353
Alignment:
Q  38 acggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctt 136  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||| ||    
T  35142055 acggatttttccgggttttgtaatccggaaacttcaaaaattagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccatt 35142154  T
Q  137 ttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatatt 236  Q
    |||||||||        |||||||||||||||||  ||| ||||||||||||||| |||||||| ||||||||||| |||| |||||||  |||||||||    
T  35142155 ttttaaggtaaaac---agttcggattatataatatgaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaaagacaatatt 35142251  T
Q  237 aatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 336  Q
    ||||||||||||||| |||||| |  ||||||||||| |||  ||||||||||||||||  || |||||||||||||||||||||||||||  |||||||    
T  35142252 aatcttcctaactctcatccttctgctttgggtcattgttatctgttcttagtcaaaaactgggttttcgggctacttgatcggattgctccgaaacttc 35142351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 28872947 - 28873286
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    ||||||||| || |||| |||||||||||||| |||||||  |||||| ||||||| ||||||| ||| ||||||||||||| |||||||||| ||||||    
T  28872947 tgatgtttttctttgttatagggtgaaaaatgaagttacgagtttttctggattttataatccgaaaatttcaaaaaataggacgcgttacattatgttt 28873046  T
Q  101 cccgattacataatccgaaaaccccc-aaacaccc--ttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaa 197  Q
    || ||||||||||||| | ||||||| ||||||||  |||||||||||        |||||||||||||||||| ||| ||||||||||||||| |||||    
T  28873047 ccggattacataatccaacaaccccctaaacacccttttttttaaggtaaaac---agttcggattatataatctgaactgtatcagcacaaattctaaa 28873143  T
Q  198 catatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaat 296  Q
    ||| ||||||||||  |||| ||||||||||||||||||||||||| ||||||| || |||    |||||||||| | ||||||||||||||||||||||    
T  28873144 catgtttgtaacatagatagtcattttagggacaatattaatcttcttaactctcattcttccgcttttgggtcactgttacttgttcttagtcaaaaat 28873243  T
Q  297 cggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||| |||||||||||||||||||||||||||  ||||||||||    
T  28873244 cgggttttcgggctacttgatcggattgctccgaaacttcccc 28873286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 47740147 - 47739812
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||  |||||||||||  |||  || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47740147 tgatgttttcttttgttaaagggtgaaaaaatgagcaacagatttttccagattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 47740048  T
Q  101 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
    || |||||||||||||| |||||||| ||||||||||||| |||||       | |||  |||||||||||| ||| ||||||||||||||| |||||||    
T  47740047 ccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa---ttgttttgattatataatctgaactgtatcagcacaaattctaaaca 47739951  T
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 299  Q
    | ||||||||||  |||| ||||| ||||||||||||||||||| ||||||| |||||| | |||| ||||||| |||| || | ||||| |||||| ||    
T  47739950 tgtttgtaacatagatagtcatttaagggacaatattaatcttcataactctcatccttctgtttt-ggtcattattacctggttttagttaaaaattgg 47739852  T
Q  300 attttcgggctacttgatcggattgctctaaaacttcccc 339  Q
     ||||||||||||||||||||||||||| |||||||||||    
T  47739851 gttttcgggctacttgatcggattgctccaaaacttcccc 47739812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 20 - 339
Target Start/End: Complemental strand, 38977944 - 38977627
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 119  Q
    |||||||||||   ||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||||||    
T  38977944 agggtgaaaaaataagtaacggatttttctagattttgtaatccggaaacttcaaaaaatagggcgcgttacatggtgttttgggattacataatccgaa 38977845  T
Q  120 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 218  Q
    ||||||| ||||||| ||||| |||||        |||||  ||||||||||||||| |||||||||||||||  ||||||| ||||||||||| ||||     
T  38977844 aaccccctaaacaccttttttcaaggtaaaac---agttcaaattatataatccgaactgtatcagcacaaattataaacatgtttgtaacatggatagt 38977748  T
Q  219 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 318  Q
    ||||||| ||||||||||||||||||||||||| |||||| | |||||||||||| |||| ||| |||||| ||||| ||  |||||| |||||||||||    
T  38977747 cattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgtccttagttaaaaaccgagttttcgagctacttgatc 38977648  T
Q  319 ggattgctctaaaacttcccc 339  Q
    ||||||||| |||||||||||    
T  38977647 ggattgctccaaaacttcccc 38977627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 45 - 339
Target Start/End: Complemental strand, 34821514 - 34821222
Alignment:
Q  45 tttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaag 143  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||| |||||||| ||||||| ||||| |||    
T  34821514 tttccgaattttgtaatccggaaacttcaaaaaatagagcgcgttacatgatgttttcggattacataatccggaaaccccctaaacaccatttttcaag 34821415  T
Q  144 gtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttc 243  Q
    ||       ||||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||  |||| ||||||| |||||||||||||||||    
T  34821414 gtaaaa---tagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcattttatggacaatattaatcttc 34821318  T
Q  244 ctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    |||| | | |||||| | |||||||||||| |||| |||||||||| ||||| ||| ||||| |||||||||||||||| ||||| ||||||||||    
T  34821317 ctaaatttcatccttctgttttgggtcattgttacctgttcttagttaaaaagcgggttttcaggctacttgatcggatcgctctgaaacttcccc 34821222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 4 - 327
Target Start/End: Complemental strand, 501353 - 501032
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| ||||| |||||||||||||| |  |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||     
T  501353 tgttttcctttgttatagggcgaaaaatggagttatgagtttttccggattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatgtttccg 501254  T
Q  104 gattacataatccg-aaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacata 201  Q
    |||| ||||||||| ||||||||| ||||||| ||||| |||||        |||||| ||||||||||||||| ||||| ||||||||| ||||||||     
T  501253 gattgcataatccggaaaaccccctaaacaccttttttcaaggtaaaac---agttcg-attatataatccgaactgtataagcacaaattctaaacatg 501158  T
Q  202 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 301  Q
    ||||||| ||| |||| ||||||| |||||||||||||||||||| |||| |||||| | |||||||||||| |||| |||| ||| |||||||||   |    
T  501157 tttgtaaaatggatagtcattttatggacaatattaatcttcctagctctcatccttctgttttgggtcattgttacatgtttttattcaaaaatcatgt 501058  T
Q  302 tttcgggctacttgatcggattgctc 327  Q
    ||||||||||||||||||||||||||    
T  501057 tttcgggctacttgatcggattgctc 501032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 33 - 338
Target Start/End: Complemental strand, 3352249 - 3351946
Alignment:
Q  33 gagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaaca 131  Q
    |||| ||| ||||||||  ||||||||||| |||||||| ||||||||||| |||||||||||||||||| ||||||||||| || |||||||| |||||    
T  3352249 gagtaacgaatttttccaaattttgtaatcaggaaacttaaaaaaatagggtgcgttacatgatgtttccggattacataattcggaaaccccctaaaca 3352150  T
Q  132 cccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggaca 231  Q
    |||||| | |||||        |||||| ||||||||||| ||| ||||||||||||||| |||||||| ||||||||||| |||| |||||||||||||    
T  3352149 ccctttatcaaggtaaaac---agttcgaattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggaca 3352053  T
Q  232 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaa 331  Q
    |||||||||||||||||||| || ||| | |||||||||||| ||||  ||||||||| |||||| || ||||| |||||||||||||||||||||  ||    
T  3352052 atattaatcttcctaactctcattcttctgttttgggtcattgttaccggttcttagtaaaaaatagggttttcaggctacttgatcggattgctccgaa 3351953  T
Q  332 acttccc 338  Q
    |||||||    
T  3351952 acttccc 3351946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 33 - 307
Target Start/End: Complemental strand, 51540797 - 51540525
Alignment:
Q  33 gagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaaca 131  Q
    |||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  |||||    
T  51540797 gagtaacggatttttctggattttggaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccgaattacataatccggaaaccccttaaaca 51540698  T
Q  132 cccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggaca 231  Q
    || ||||| |||||        |||||||||||||||||| |||  |||||||||||||| |||||||| |||||||| || |||| |||||||||||||    
T  51540697 ccgtttttcaaggtaaaac---agttcggattatataatctgaatagtatcagcacaaattctaaacatgtttgtaacttggatagtcattttagggaca 51540601  T
Q  232 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgg 307  Q
    |||||||||||||||||||| |||||| |  ||||||||||| ||||  ||||||||||||||||||| |||||||    
T  51540600 atattaatcttcctaactctcatccttctcctttgggtcattgttacacgttcttagtcaaaaatcgggttttcgg 51540525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 3937335 - 3937563
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| |||| |||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||      
T  3937335 tgttttcctttgttataggatgaaaaatggagttacgagtttttccgaattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttctg 3937434  T
Q  104 gattacataatccgaaaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatt 203  Q
    ||||||||||| |||        |||||||||||||||||||       ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3937435 gattacataattcga--------aaacacccttttttaaggt---aaaatagttcggattatataatccgaactgtatcagcacaaatcctaaacatatt 3937523  T
Q  204 tgtaacatgtatagccattttagggacaatattaatcttc 243  Q
    ||||||||||||| |||||||| |||||||||||||||||    
T  3937524 tgtaacatgtataaccattttatggacaatattaatcttc 3937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 4 - 327
Target Start/End: Original strand, 51258350 - 51258672
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| ||||  ||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||| || ||| |     
T  51258350 tgttttcctttgttaaagggtgaaaaatg-agttacggatttttccggattttgtaatccataaatttcaaaaaatagggcgcgttacataattttttcg 51258448  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    |||||||||||||||| |||||| ||||||| ||||| ||||         | || | ||||||||||||||| |||||||||||||||  ||||||| |    
T  51258449 gattacataatccgaacaccccctaaacaccatttttcaagggaaaaac--aatttgaattatataatccgaactgtatcagcacaaattttaaacatgt 51258546  T
Q  203 ttgtaacatgtatagccattttaggga-caatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 301  Q
    || ||||||| |||| ||||||||||| |||||||||||||| ||||||| |||||||| ||||| |||||| |||| |||||||||||||||||||  |    
T  51258547 ttataacatggatagtcattttagggaacaatattaatcttcataactctcatccttttgttttgagtcattgttacatgttcttagtcaaaaatcgagt 51258646  T
Q  302 tttcgggctacttgatcggattgctc 327  Q
    |||||| | |||||||||||||||||    
T  51258647 tttcggacaacttgatcggattgctc 51258672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 38 - 339
Target Start/End: Original strand, 39149791 - 39150089
Alignment:
Q  38 acggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctt 136  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||  ||||||| |||||||||||||| |||||||| ||||||| ||    
T  39149791 acggatttttccggattttgtaatccagaaact-caaaaaatagggcgcgttacatagtgtttccggattacataatccggaaaccccctaaacaccatt 39149889  T
Q  137 ttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatatt 236  Q
    ||| |||||        ||||||| |||||||||||||| | |||||||||||||  ||||||| ||||||||||   ||| |||||||| |||||||||    
T  39149890 tttcaaggtaaaac---agttcgggttatataatccgaactctatcagcacaaattttaaacatgtttgtaacattggtagtcattttagagacaatatt 39149986  T
Q  237 aatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 336  Q
    ||| ||||||||||| |||||| | |||||||||| | |||| |||||||||| ||||| ||| ||||||||||||||| ||| |||||||  |||||||    
T  39149987 aattttcctaactctcatccttctgttttgggtcactgttacatgttcttagttaaaaaccgggttttcgggctacttggtcgaattgctccgaaacttc 39150086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 24 - 327
Target Start/End: Complemental strand, 46622977 - 46622686
Alignment:
Q  24 tgaaaaatggagttacggatttttccggattttgtaat-ccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaac 122  Q
    |||||||  |||| ||||||||||||||||||| |||  ||||||||||||||||||||| | ||||||||||||||||| |||||||||||| | ||||    
T  46622977 tgaaaaaatgagtaacggatttttccggattttataaaaccggaaacttcaaaaaataggacacgttacatgatgtttccggattacataatctggaaac 46622878  T
Q  123 cccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccat 221  Q
    |||| ||||||| ||||| || ||        |||||||||||||||||||||| ||||||||||||||| ||||||||           | |||| |||    
T  46622877 cccctaaacaccatttttcaaagtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacat-----------ggatagtcat 46622792  T
Q  222 tttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcgga 321  Q
    |||||||||||||||||||||||| ||||| || ||| | |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  46622791 tttagggacaatattaatcttccttactctcattcttctgttttgggtcattgttacttgttcttagtcaaaaatcggattttcggactacttgatcgga 46622692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 20 - 339
Target Start/End: Complemental strand, 49096422 - 49096105
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 119  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||  |||||||||| |||  |||||||||| ||| |  |||||||||||| ||    
T  49096422 agggtgaaaaata-agttacggatttttccggattttgtaatccggaaatctcaaaaaatatggcatgttacatgattttttcgaattacataatccaaa 49096324  T
Q  120 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 218  Q
     |||||| ||||| ||||||| ||||         |||| | ||||||||||| ||| |||||||||||||||  ||||||| ||||||||||  ||||     
T  49096323 caccccctaaacagcctttttcaaggaaaaac---agtttgaattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatagatagt 49096227  T
Q  219 cattttaggga-caatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 317  Q
    ||||||||||| |||||| ||||||||||||||| |||||| | ||||| |||||| |||| ||||||| |||||||||||  |||||||||||||||||    
T  49096226 cattttagggaacaatataaatcttcctaactctcatccttctgttttgagtcattgttacctgttcttcgtcaaaaatcgagttttcgggctacttgat 49096127  T
Q  318 cggattgctctaaaacttcccc 339  Q
    |||||||||| |||||||||||    
T  49096126 cggattgctccaaaacttcccc 49096105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 51 - 338
Target Start/End: Complemental strand, 30721974 - 30721690
Alignment:
Q  51 gattttgtaatccggaaacttcaaaaaatagggcgcg---ttacatgatgtttcccgattacataatccgaaaaccccc--aaacacccttttttaaggt 145  Q
    |||||||||||||| |||||||||||||||||||||    ||||||||| ||| | |||||||||||||||| || |||  ||||||| ||||| ||||     
T  30721974 gattttgtaatccgaaaacttcaaaaaatagggcgcaatattacatgattttttcggattacataatccgaacactcccctaaacaccatttttcaagg- 30721876  T
Q  146 nnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcct 245  Q
           |||||| |||||||||||||||| ||||||||||||||| |||||||| ||||||||   | |   |||||||||||||||||||||||||||    
T  30721875 -gaaaaatagttcagattatataatccgaactgtatcagcacaaattctaaacatgtttgtaac---tct---cattttagggacaatattaatcttcct 30721783  T
Q  246 aactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 338  Q
    ||||||||||||| | ||||||||||||  |||  ||| |||||||||||| || |||||| ||||||||||||||||||||  |||||||||    
T  30721782 aactcttatccttctgttttgggtcattgatacccgttattagtcaaaaattgggttttcgagctacttgatcggattgctccgaaacttccc 30721690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 21 - 269
Target Start/End: Original strand, 33438486 - 33438731
Alignment:
Q  21 gggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaa 120  Q
    ||||||||||   ||| ||||||||||| | ||||||||||||  |||||||||||||||||||||||||||||||||| || |||||||||||  | ||    
T  33438486 gggtgaaaaaataagtaacggatttttctgaattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatgtt-ccggattacataatgtggaa 33438584  T
Q  121 acccccaaa-cacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagcc 219  Q
    |||| |||| |||| ||||| |||||        |||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||| ||| |||| |    
T  33438585 accctcaaaacaccatttttcaaggtaaaac---agttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtc 33438681  T
Q  220 attttagggacaatattaatcttcctaactcttatccttttattttgggt 269  Q
    |||||||||||||||||||||||||||||||| |||||| | ||||||||    
T  33438682 attttagggacaatattaatcttcctaactctcatccttctgttttgggt 33438731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 169 - 327
Target Start/End: Original strand, 47123136 - 47123294
Alignment:
Q  169 atccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttggg 268  Q
    ||||||| ||||||||||||||| |||||||| ||||||||||| |||  ||||||||||||||||||||||||||||||||| |||||| | |||||||    
T  47123136 atccgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcatccttctgttttggg 47123235  T
Q  269 tcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
     |||| |||| |||||||||| ||||| || ||||||||||||||||||||||||||||    
T  47123236 ccattgttacctgttcttagttaaaaaccgaattttcgggctacttgatcggattgctc 47123294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 169 - 327
Target Start/End: Original strand, 47130502 - 47130660
Alignment:
Q  169 atccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttggg 268  Q
    ||||||| ||||||||||||||| |||||||| ||||||||||| | |  ||||||||||||||||||||||||||||||||| |||||| | |||||||    
T  47130502 atccgaactgtatcagcacaaattctaaacatgtttgtaacatggacaatcattttagggacaatattaatcttcctaactctcatccttctgttttggg 47130601  T
Q  269 tcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
     |||| |||| |||||||||| ||||| || ||||||||||||||||||||||||||||    
T  47130602 ccattgttacctgttcttagttaaaaaccgaattttcgggctacttgatcggattgctc 47130660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 234 - 339
Target Start/End: Original strand, 3938357 - 3938462
Alignment:
Q  234 attaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaac 333  Q
    ||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||| | |||||||| ||||||||||||||||||| ||||    
T  3938357 attaatcttcctaactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatctggttttcgggttacttgatcggattgctctgaaac 3938456  T
Q  334 ttcccc 339  Q
    ||||||    
T  3938457 ttcccc 3938462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 4 - 126
Target Start/End: Original strand, 48303938 - 48304060
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| ||||  |||||||||||  ||||||||||||||||||||||||||||||||||||  ||||||||||||| | |||||||||| ||| |     
T  48303938 tgttttcctttgttaaagggtgaaaaaatgagttacggatttttccggattttgtaatccggaaatctcaaaaaatagggtgtgttacatgattttttca 48304037  T
Q  104 gattacataatccgaaaaccccc 126  Q
    |||||||||||||||||||||||    
T  48304038 gattacataatccgaaaaccccc 48304060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 162 - 335
Target Start/End: Complemental strand, 5127955 - 5127782
Alignment:
Q  162 ttatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttta 261  Q
    |||||||||| ||| |||||||||| ||||  ||||||| ||||||||||| ||| |||||||| ||||||||||||||||| || |||| |||| |||     
T  5127955 ttatataatctgaattgtatcagcataaattttaaacatgtttgtaacatggatatccattttatggacaatattaatcttcatagctctcatccatttg 5127856  T
Q  262 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 335  Q
    ||||| |||||| ||| |||||||| |||||||||| | ||||||| ||||||||| | |||||| | ||||||    
T  5127855 ttttgcgtcattgttagttgttcttggtcaaaaatctggttttcggactacttgattgaattgctttgaaactt 5127782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 153 - 325
Target Start/End: Original strand, 40062473 - 40062645
Alignment:
Q  153 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 252  Q
    ||||||||||||||||||||||| | |||||||||||||  | |   | ||||||||||| ||| | | ||||  ||| ||||||||||||||||||||     
T  40062473 tagttcggattatataatccgaactatatcagcacaaattttgagtttgtttgtaacatggataactagtttaaagaccatattaatcttcctaactctg 40062572  T
Q  253 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgc 325  Q
     ||||||| |||| ||||||| ||| ||||||||||||||||||| | |||||||||||||||||| ||||||    
T  40062573 gtccttttgttttaggtcattattagttgttcttagtcaaaaatctggttttcgggctacttgatcagattgc 40062645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 35345931 - 35345788
Alignment:
Q  196 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaa 295  Q
    ||||| ||||||||||| |||| ||||||| ||||||||||||| || |||||||| |||||||| ||||  |||||| ||| |||||||||||||||||    
T  35345931 aacatgtttgtaacatggatagtcattttatggacaatattaatatttctaactctcatccttttgtttttcgtcattgttagttgttcttagtcaaaaa 35345832  T
Q  296 tcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    | || |||||||| || |||||||||||||||  ||||||||||    
T  35345831 ttgggttttcgggttaattgatcggattgctccgaaacttcccc 35345788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 154 - 339
Target Start/End: Original strand, 51492894 - 51493080
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    |||||||||| ||||||||||| ||||  ||||||||| |||| ||| ||||||| ||| ||||  |||||| ||||||||||||||||||||||||| |    
T  51492894 agttcggattttataatccgaactgtactagcacaaattctaatcatgtttgtaatatgaatagttattttatggacaatattaatcttcctaactctca 51492993  T
Q  254 tccttttattttgggtcattcttacttgttcttagt-caaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||||| | |||| ||||||| |||  ||||||||||  |||||| || |||| || |||||||||| ||||||||  ||||||||||    
T  51492994 tccttatgtttttggtcattgttagctgttcttagtaaaaaaattgggtttttggcctacttgatcagattgctccgaaacttcccc 51493080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 202 - 327
Target Start/End: Original strand, 46624863 - 46624988
Alignment:
Q  202 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 301  Q
    |||||||||||||||| ||||||| ||| ||||||||||||||||||||| |||||| | |||||||||||| ||| ||||| |||||||||||||  ||    
T  46624863 tttgtaacatgtatagtcattttatggaaaatattaatcttcctaactctcatccttctgttttgggtcattattagttgttattagtcaaaaatctaat 46624962  T
Q  302 tttcgggctacttgatcggattgctc 327  Q
    ||| || ||||||||||| |||||||    
T  46624963 ttttggactacttgatcgaattgctc 46624988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 34821592 - 34821510
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcc 102  Q
    |||||||||||  |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34821592 agggtgaaaaaatgagtaacggaattttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacctgatgtttcc 34821510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 45244356 - 45244469
Alignment:
Q  24 tgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacc 123  Q
    |||||||  |||||| |||||||||||||||||||||| || |||  |||||||||||||||||||||||||| ||| | |||||||||||| |||||      
T  45244356 tgaaaaaatgagttatggatttttccggattttgtaattcgaaaatctcaaaaaatagggcgcgttacatgattttttcggattacataatctgaaaa-- 45244453  T
Q  124 cccaaacaccctttttt 140  Q
     ||||||||||||||||    
T  45244454 -ccaaacaccctttttt 45244469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 160 - 326
Target Start/End: Original strand, 29048444 - 29048610
Alignment:
Q  160 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 259  Q
    |||||||||||| ||| | ||||| ||||||| || || || ||||||||||| | ||  |||||| ||| ||||||||||||| ||||||||||||||     
T  29048444 gattatataatcggaactatatcaacacaaattctgaatatgtttgtaacatg-acagttattttaaggataatattaatcttcataactcttatcctta 29048542  T
Q  260 tattttgggtcattcttacttgttcttagt-caaaaatcggattttcgggctacttgatcggattgct 326  Q
    | |||| ||||||| |||  ||||||||||  ||||||| | ||||| ||||||||||||||||||||    
T  29048543 tgttttaggtcattgttaactgttcttagtataaaaatctggttttcaggctacttgatcggattgct 29048610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 161 - 327
Target Start/End: Complemental strand, 47980063 - 47979895
Alignment:
Q  161 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-- 258  Q
    ||||||||||||||| |||||||||||||||  | ||||||||| ||||||  |||| ||||||| |||||||||||||||| |||||||| ||   |      
T  47980063 attatataatccgaactgtatcagcacaaattttgaacatatttataacatagatagtcattttaaggacaatattaatctttctaactctcatggatag 47979964  T
Q  259 ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    | ||||| ||||||| ||| ||||| ||| |||||||    |||| |||||||||||||| ||||||||    
T  47979963 tcattttaggtcattgttagttgttattaatcaaaaaatcaatttccgggctacttgatcagattgctc 47979895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 154 - 339
Target Start/End: Complemental strand, 54229961 - 54229776
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    ||||||||||||||||| | || ||||||| ||||||| || |   | ||||||||||| ||| ||| |||| |||| |||||||||||||| ||||  |    
T  54229961 agttcggattatataattcaaactgtatcaacacaaattctgagtctgtttgtaacatgaatatccagtttaaggaccatattaatcttccttactcgca 54229862  T
Q  254 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    || || | || | ||||||| ||| ||||| ||||||||||||  | |||||  ||||||||||| ||||||||| ||||||||||    
T  54229861 tcattatgttctaggtcattgttagttgttattagtcaaaaattcggttttcttgctacttgatcagattgctctgaaacttcccc 54229776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 154 - 327
Target Start/End: Complemental strand, 14828983 - 14828809
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    |||| ||||||||||||||||| | ||| | | ||||| ||||| || ||| ||||||| |||   |||||| ||| ||||||||||||| |||| || |    
T  14828983 agtttggattatataatccgaaatatattaacgcaaattctaaatatgtttataacatggataataattttaaggataatattaatcttcataaccctca 14828884  T
Q  254 tccttttattttgggtcattcttacttgttcttagtca-aaaatcggattttcgggctacttgatcggattgctc 327  Q
    ||| | | ||||||||| || ||| ||||||||||||| |||||| |||||||||  |||||||| |||||||||    
T  14828883 tccatctgttttgggtccttgttagttgttcttagtcaaaaaatctgattttcggattacttgattggattgctc 14828809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 47123050 - 47123135
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgc 86  Q
    |||||||||| | ||||  |||||||||||  |||| |||| |||||||| |||||||||||||||||||||||||||||||||||    
T  47123050 tgatgttttcttttgttaaagggtgaaaaaatgagtaacgggtttttccgaattttgtaatccggaaacttcaaaaaatagggcgc 47123135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 47130416 - 47130501
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgc 86  Q
    |||||||||| | ||||  |||||||||||  |||| |||| |||||||| |||||||||||||||||||||||||||||||||||    
T  47130416 tgatgttttcttttgttaaagggtgaaaaaatgagtaacgggtttttccgaattttgtaatccggaaacttcaaaaaatagggcgc 47130501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 156 - 327
Target Start/End: Original strand, 47769359 - 47769530
Alignment:
Q  156 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 255  Q
    ||||||||||| |||| ||| ||||||||| ||||| || ||||| ||||||||||| |||| ||||||| | |  |||||||||||  ||||| | |||    
T  47769359 ttcggattatagaatctgaattgtatcagcgcaaattctgaacatgtttgtaacatggatagtcattttaagaatcatattaatctttttaactatcatc 47769458  T
Q  256 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
     || |||||| ||||||| ||| ||||||  |||| ||||   ||| |||||| || |||||||||||||||    
T  47769459 attctattttaggtcattgttagttgttcccagtcgaaaaaatgatattcgggttatttgatcggattgctc 47769530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 222 - 339
Target Start/End: Complemental strand, 4300276 - 4300159
Alignment:
Q  222 tttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcgga 321  Q
    |||| ||||||||||||||||||||||| | |||||||| | || ||||||| |||  |||||||||| |||||||   |||| |||||  |||||  ||    
T  4300276 tttaaggacaatattaatcttcctaactatcatccttttgtattaggtcattgttagatgttcttagtaaaaaatccagtttttgggcttattgattaga 4300177  T
Q  322 ttgctctaaaacttcccc 339  Q
    ||||||||||||||||||    
T  4300176 ttgctctaaaacttcccc 4300159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 262 - 327
Target Start/End: Original strand, 33439384 - 33439449
Alignment:
Q  262 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    |||||||||||| |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||    
T  33439384 ttttgggtcattgttactttttcttagttaaaaatcagattttcggactacttgatcggattgctc 33439449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 249
Target Start/End: Complemental strand, 45712148 - 45712053
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 249  Q
    |||||||||||||||||| ||| |||||||||||||||  | | ||| ||||||||||| |||  |||||||  ||| ||||||||||||||||||    
T  45712148 agttcggattatataatctgaactgtatcagcacaaattatgatcatgtttgtaacatggataatcattttaaagaccatattaatcttcctaact 45712053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 161 - 283
Target Start/End: Complemental strand, 27143473 - 27143351
Alignment:
Q  161 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 260  Q
    ||||||||||| ||  ||||||||||||||| || ||||| ||||||||||| ||||  |||||| ||| ||||||||  ||||||||  | |||||| |    
T  27143473 attatataatctgatctgtatcagcacaaattctgaacatgtttgtaacatggatagttattttaaggataatattaagattcctaaccatcatccttct 27143374  T
Q  261 attttgggtcattcttacttgtt 283  Q
    ||||||| ||||| ||| |||||    
T  27143373 attttggatcattgttagttgtt 27143351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 247
Target Start/End: Complemental strand, 26053584 - 26053491
Alignment:
Q  155 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggg-acaatattaatcttcctaa 247  Q
    |||| ||||||||||||| || ||||||| ||||||| |||||||| ||| |||| || |||| |||||||||| |||||| ||||||||||||    
T  26053584 gttctgattatataatccaaactgtatcaacacaaattctaaacatgtttataacttggatagtcattttagggaacaatactaatcttcctaa 26053491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 154 - 273
Target Start/End: Original strand, 29035893 - 29036013
Alignment:
Q  154 agttcggattatataatccgaagtgt-atcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 252  Q
    |||||| ||||||||||| ||| ||| |||| ||||||| |||| ||| ||||||||||| |||  ||||||| |||| |||||| |||||||||||||     
T  29035893 agttcgaattatataatctgaactgttatcaacacaaattctaagcatgtttgtaacatggataatcattttaaggaccatattactcttcctaactctc 29035992  T
Q  253 atccttttattttgggtcatt 273  Q
    ||| || | |||| |||||||    
T  29035993 atcattatgttttaggtcatt 29036013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 42936685 - 42936736
Alignment:
Q  42 atttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacat 93  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  42936685 atttttccggattttgtaatccgaaaacttcaaaaaatagggtgcgctacat 42936736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 8735530 - 8735592
Alignment:
Q  196 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 258  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||||||||||||||| | ||||||    
T  8735530 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactttcatcctt 8735592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 9087771 - 9087833
Alignment:
Q  196 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 258  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||||||||||||||| | ||||||    
T  9087771 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactttcatcctt 9087833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 42936616 - 42936685
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttca 73  Q
    ||||||||| ||||  ||||||||||| |||||||||||||||||| |||| |  ||||| |||||||||    
T  42936616 tgttttcctttgttaaagggtgaaaaaaggagttacggatttttccagattataaaatccagaaacttca 42936685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 33842098 - 33842034
Alignment:
Q  194 taaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 258  Q
    ||||||| ||||||| ||| |||| ||||||| ||||||||||||| ||| ||||||| ||||||    
T  33842098 taaacatgtttgtaatatggatagtcattttaaggacaatattaatgttcgtaactctcatcctt 33842034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 29035809 - 29035880
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccatttta 225  Q
    ||||||||||||||||| |||| ||||| |  |||||| || ||||| ||||||||||| |||| |||||||    
T  29035809 agttcggattatataattcgaattgtatgaatacaaattctgaacatgtttgtaacatggatagtcatttta 29035880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 45244514 - 45244577
Alignment:
Q  183 agcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttccta 246  Q
    ||||| ||| || ||||| |||||||||||  ||| ||||||| ||||||||||||||||||||    
T  45244514 agcaccaattctgaacatgtttgtaacatggttagtcattttaaggacaatattaatcttccta 45244577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 273
Target Start/End: Original strand, 46555445 - 46555554
Alignment:
Q  164 atataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatt 263  Q
    |||||||| ||| ||||| |||||||||  | |  || ||| ||||||  ||| |||||||| |||| |||||||||||| ||||||| |||||| | ||    
T  46555445 atataatctgaattgtataagcacaaattttgagtatgtttataacatagataaccattttaaggaccatattaatcttcataactctcatccttctgtt 46555544  T
Q  264 ttgggtcatt 273  Q
    || |||||||    
T  46555545 ttaggtcatt 46555554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 8735309 - 8735373
Alignment:
Q  182 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttccta 246  Q
    |||||| ||| || ||||| ||| ||||||| |||| ||||||| ||||||||||||| ||||||    
T  8735309 cagcaccaattctgaacatgtttataacatggatagtcattttaaggacaatattaatattccta 8735373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 9087550 - 9087614
Alignment:
Q  182 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttccta 246  Q
    |||||| ||| || ||||| ||| ||||||| |||| ||||||| ||||||||||||| ||||||    
T  9087550 cagcaccaattctgaacatgtttataacatggatagtcattttaaggacaatattaatattccta 9087614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 33700774 - 33700810
Alignment:
Q  42 atttttccggattttgtaatccggaaacttcaaaaaa 78  Q
    |||||||| |||||||||||||| |||||||||||||    
T  33700774 atttttccagattttgtaatccgaaaacttcaaaaaa 33700810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 33701497 - 33701457
Alignment:
Q  33 gagttacggatttttccggattttgtaatccggaaacttca 73  Q
    |||||||| |||||||||||||  |||||||||||||||||    
T  33701497 gagttacgaatttttccggattacgtaatccggaaacttca 33701457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 4 - 339
Target Start/End: Original strand, 32441766 - 32442098
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  32441766 tgttttcctttgttatagggtgaaaaatggagttaaggatttttctggattttgtaatccggaaacttcaaaaaatagcgcgcgttacatgatgtttccg 32441865  T
Q  104 gattacataatccgaaaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatt 203  Q
    |||||||||||||| ||||||| ||||||  |||||||||||       |||||||||||||||||||| || |||| ||||||| ||| ||||||||||    
T  32441866 gattacataatccggaaacccctaaacacatttttttaaggtaaaa---tagttcggattatataatccaaactgtaccagcacatatcgtaaacatatt 32441962  T
Q  204 tgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattt 303  Q
    ||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||  |||    
T  32441963 tgtaacatgtataaccattttaaagacaatattaatcttcctaactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatcgagttt 32442062  T
Q  304 tcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||||||||||||||||||||||||| ||||||||||    
T  32442063 tcgggctacttgatcggattgctctgaaacttcccc 32442098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 4 - 338
Target Start/End: Complemental strand, 6229023 - 6228693
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  6229023 tgttttcctttgttatagggtgaaaaatggagctacggatttttccggattttgtaacccggaaacttcaaaaaatagggcgcgttacatgatgtttccg 6228924  T
Q  104 gattacataatccgaaaacccccaaacaccc--ttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacata 201  Q
    |||||   ||| || ||||||| ||||||||  |||||||||||       ||||||||||||||||||||||| ||||||| | ||||||||||| |||    
T  6228923 gatta---aattcggaaacccctaaacacccctttttttaaggtaaaa---tagttcggattatataatccgaactgtatcaactcaaatcctaaagata 6228830  T
Q  202 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 301  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||| || |    
T  6228829 ttagtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaattgggt 6228730  T
Q  302 tttcgggctacttgatcggattgctctaaaacttccc 338  Q
    |||||||||| ||||||||||||||||||||||||||    
T  6228729 tttcgggctatttgatcggattgctctaaaacttccc 6228693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 49396960 - 49397299
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||    
T  49396960 tgatgttttcctttattatagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaataggatgcgttacaagatgttt 49397059  T
Q  101 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
       |||||||||||||||||| |||  ||||| | |||||||| ||       ||||||||||||||||| ||||| |||||||||| ||||||||||||    
T  49397060 ttggattacataatccgaaaatcccttaaacatcattttttaatgtaaaa---tagttcggattatataaaccgaactgtatcagcaaaaatcctaaaca 49397156  T
Q  200 tatttgtaacatgtatagccat----tttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaa 295  Q
    ||||||||||||||||| ||||    ||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||| ||||||||||||||||    
T  49397157 tatttgtaacatgtataaccatccattttagggacaatattaatcttcctaactcttatccttttgttttgagtcattgttacatgttcttagtcaaaaa 49397256  T
Q  296 tcggattttcgggctacttgatcggattgctctaaaacttccc 338  Q
    |||| |||||| ||||||||||||||||||||| |||||||||    
T  49397257 tcgggttttcgagctacttgatcggattgctctgaaacttccc 49397299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 4 - 338
Target Start/End: Original strand, 34972829 - 34973151
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| ||||||||||||||||||||||||||||          |||||| |||||||| |||||||||||||||||||||||||||| |     
T  34972829 tgttttcctttgttatagggtgaaaaatggagttacggatttt----------gtaatctggaaacttaaaaaaatagggcgcgttacatgatgttttcg 34972918  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    || |||||||||||||||||||| ||||||| |||||||||||       ||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  34972919 gactacataatccgaaaaccccctaaacaccattttttaaggtaaaa---tagttcggattatataatccgaactgtatcagcataaatcctaaacatat 34973015  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||  |||||||||||||||||||| ||    
T  34973016 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttgttttaggtcattgttatctgttcttagtcaaaaatcgggtt 34973115  T
Q  303 ttcgggctacttgatcggattgctctaaaacttccc 338  Q
    ||| | |||||||||||||||||||| |||||||||    
T  34973116 ttcagactacttgatcggattgctctgaaacttccc 34973151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 7 - 335
Target Start/End: Complemental strand, 6003882 - 6003556
Alignment:
Q  7 tttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaat--agggcgcgttacatgatgtttcccg 104  Q
    |||||| |||| ||||||||||||||||||||||||||||| || ||||| |||||||||||||| ||||||   || | |||||||||||||||||| |    
T  6003882 tttcctttgttatagggtgaaaaatggagttacggattttttcgaattttataatccggaaacttaaaaaaaataagagtgcgttacatgatgtttccgg 6003783  T
Q  105 attacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatt 203  Q
    ||||||||||||| |||||||| |||||||  ||||||||||       ||||||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  6003782 attacataatccggaaaccccctaaacacc--tttttaaggtaaaa---tagttcggattatataatccgaactgtatcggcacaaatcataaacatatt 6003688  T
Q  204 tgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattt 303  Q
    | ||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| | |||    
T  6003687 tttaatatgtatagtcattttagggataatattaatcttcctaactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcaggttt 6003588  T
Q  304 tcgggctacttgatcggattgctctaaaactt 335  Q
    |||||||||||||| |||||||||| ||||||    
T  6003587 tcgggctacttgattggattgctctgaaactt 6003556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 4 - 338
Target Start/End: Complemental strand, 55052831 - 55052498
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||     
T  55052831 tgttttcctttgttatagggtgaaaaatggagttacgggtttttccggattatgtaatccggaaacttcaaaaaatagggcgtgttagatgatgtttccg 55052732  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    ||||| |||||||| |||||||| ||||||||||||| |||||        |||||| ||||||||||||||| | ||||||||||||| |||||||| |    
T  55052731 gattatataatccggaaaccccctaaacaccctttttcaaggtaaaac---agttcgaattatataatccgaactttatcagcacaaattctaaacatgt 55052635  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttta-ttttgggtcattcttacttgttcttagtcaaaaatcggat 301  Q
    |||||||||| |||| ||||||||||||||| ||||||||||||||| | ||||||  | |||| ||||||| |||| ||||||||||||||||||| ||    
T  55052634 ttgtaacatggatagtcattttagggacaatgttaatcttcctaactatcatccttccattttttggtcattgttacctgttcttagtcaaaaatcgaat 55052535  T
Q  302 tttcgggctacttgatcggattgctctaaaacttccc 338  Q
    |||||||||||||||| |||||||||  |||||||||    
T  55052534 tttcgggctacttgattggattgctccgaaacttccc 55052498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 25491610 - 25491274
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||  |||||||||||  |||| |||  ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25491610 tgatgttttcttttgttaaagggtgaaaaaatgagtaacgagttttttcggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgttt 25491511  T
Q  101 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
    || |||||||||||||| |||||||| ||||||| ||||| |||||        | |||||||||||||||| ||| ||||||||||||||| |||||||    
T  25491510 ccggattacataatccggaaaccccctaaacaccttttttcaaggtaaaac---aattcggattatataatctgaactgtatcagcacaaattctaaaca 25491414  T
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 299  Q
    | ||||||||||| |||| ||||||| ||||||||||||||||||||||||| |||||| | |||||||||||| |||| ||||||||||||||||||||    
T  25491413 tgtttgtaacatgaatagtcattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgg 25491314  T
Q  300 attttcgggctacttgatcggattgctctaaaacttcccc 339  Q
     |||| || ||||||||||||||||||| |||| ||||||    
T  25491313 gtttttggactacttgatcggattgctccaaaatttcccc 25491274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 48319279 - 48318956
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||  |||||||||||  |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48319279 tgatgttttcttttgttaaagggtgaaaaaatgagtgacggatttttccggattt-gtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 48319181  T
Q  101 cccgattacataatccgaaaaccccc-aaacaccctttttt-aaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaac 198  Q
    |  ||||||||||||||||||||||| ||||||| |||||| |||||        || ||||||||||||||||||| ||||||||||||||| ||||||    
T  48319180 ctggattacataatccgaaaaccccctaaacacctttttttcaaggtaaaac---agctcggattatataatccgaactgtatcagcacaaattctaaac 48319084  T
Q  199 atatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcg 298  Q
    || ||||||||||  |||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||  | |||||||| ||||||||    
T  48319083 atgtttgtaacattgatagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttatctattcttagtaaaaaatcg 48318984  T
Q  299 gattttcgggctacttgatcggattgct 326  Q
    ||||||||| ||||||||||||||||||    
T  48318983 gattttcggactacttgatcggattgct 48318956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 19835472 - 19835796
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||  |||||||||||  |||| |||| |||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||    
T  19835472 tgatgttttcttttgttaaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaactttgaaaaatagggtgcgttacatgatgttt 19835571  T
Q  101 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
    || |||||||||||||| |||||||| ||||||||||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||    
T  19835572 ccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaaca 19835668  T
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 299  Q
    | ||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||| || | ||||| |||||| |||| |||| |||||||||| ||||    
T  19835669 tgtttgtaacatggatagtcattttaggaacaatattaatcttcctaactctcatctttctgttttgcgtcattgttacctgtttttagtcaaaagtcgg 19835768  T
Q  300 attttcgggctacttgatcggattgctc 327  Q
     ||||||| |||||||||||||||||||    
T  19835769 gttttcggactacttgatcggattgctc 19835796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 33 - 339
Target Start/End: Original strand, 40703648 - 40703952
Alignment:
Q  33 gagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaaca 131  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||| |||||||||| | |||||||||| |||||    
T  40703648 gagtaacggatttttccggattttgtaatccggaaatttcaaaaaatagggtgcattacatgatgtttccggattacataacctgaaaaccccctaaaca 40703747  T
Q  132 cccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggaca 231  Q
    |||||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| |||||||||||||    
T  40703748 ccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggaca 40703844  T
Q  232 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaa 331  Q
    |||||||||||||||||||| |||||| | |||||||||||| |||  | |||||||||||||||||| |||| || ||||||||||||||||||   ||    
T  40703845 atattaatcttcctaactctcatccttctgttttgggtcattgttatcttttcttagtcaaaaatcgggtttttggactacttgatcggattgctaagaa 40703944  T
Q  332 acttcccc 339  Q
    ||||||||    
T  40703945 acttcccc 40703952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 17933352 - 17933019
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||  |||||| ||||  || | |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17933352 tgatgttttcttttgttaaagggtgcaaaaatgaataacggatttttccagattttgtaatccagaaacttcaaaaaatagggcgcgttacatgatgttt 17933253  T
Q  101 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
    || |||||||||||| | |||||||  |||||||||||||||||||        ||||||||||||||||||||||  |||||||||||||| |||||||    
T  17933252 ccggattacataatctggaaaccccttaaacacccttttttaaggtaaaac---agttcggattatataatccgaacagtatcagcacaaattctaaaca 17933156  T
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 299  Q
    | ||||||||||| |||  ||||||||||||| ||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||| ||||||| |    
T  17933155 tgtttgtaacatggataatcattttagggacattattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagtaaaaaatcag 17933056  T
Q  300 attttcgggctacttgatcggattgctctaaaacttc 336  Q
    |||||| | | |||||||||||||||||  |||||||    
T  17933055 attttcagaccacttgatcggattgctccgaaacttc 17933019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 4 - 335
Target Start/End: Original strand, 38536125 - 38536455
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| |||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||     
T  38536125 tgttttcctttgttatagggtgaaaaatgaagttacgggtttttccggattttgtaattcggaaacttcaaaaaatagggcgtgttacatgatgtttcca 38536224  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    |||||||||||||| |||||||| ||||||| ||||| |||||        ||||||||||||||||||  || |||||| |||||||| |||||||| |    
T  38536225 gattacataatccggaaaccccctaaacaccttttttcaaggtaaaac---agttcggattatataatctaaattgtatctgcacaaattctaaacatgt 38536321  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggat 301  Q
    |||||||||| |||| ||||||| ||||||||||||||||||||||||| ||  || |  |||| ||||||| |||| ||||||||||||||||||   |    
T  38536322 ttgtaacatgaatagtcattttatggacaatattaatcttcctaactctcattattctgtttttaggtcattgttacatgttcttagtcaaaaatcaagt 38536421  T
Q  302 tttcgggctacttgatcggattgctctaaaactt 335  Q
    |||| |||||||||||||||||| || |||||||    
T  38536422 tttcaggctacttgatcggattgttccaaaactt 38536455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 63 - 339
Target Start/End: Complemental strand, 41413252 - 41412977
Alignment:
Q  63 cggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcgga 161  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||||| |||||||| |||||| ||||||||||||       |||||||||    
T  41413252 cggaaacttcaaaaaatagga-gcgttacatgatgtttccggattacataatccggaaaccccctaaacactcttttttaaggtaaaa---tagttcgga 41413157  T
Q  162 ttatata--atccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 259  Q
    |||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||    
T  41413156 ttatatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagtcattttaggaacaatattaatcttcctaactcttatcattt 41413057  T
Q  260 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    | |||| ||||||| |||| |||||||| ||||||||| | |||||||||||||||||| ||||| ||| ||||||||||    
T  41413056 tgttttaggtcattgttacatgttcttaatcaaaaatctggttttcgggctacttgatcagattgttctgaaacttcccc 41412977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 2506248 - 2505922
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatg-gagttacggatttttccggattttgtaatccggaaacttcaaaaaata-gggcgcgttacatgatgt 98  Q
    |||||||||| | ||||  |||||||||||   |||| ||||||||||||  ||||||| || | ||||| |||||||||| ||||||||||||||||||    
T  2506248 tgatgttttcttttgttaaagggtgaaaaaaatgagtaacggatttttccaaattttgtgattcagaaacatcaaaaaataagggcgcgttacatgatgt 2506149  T
Q  99 ttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaa 197  Q
    |||| |||||||||||||| |||||||| ||||||||||||| |||||        |||| ||||||||||||||||| |||||||||||||||  ||||    
T  2506148 ttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agtttggattatataatccgaactgtatcagcacaaattttaaa 2506052  T
Q  198 catatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatc 297  Q
    ||| ||||||||||| |||| ||||||||||||||||||||||||||||| ||| |||||| | |||||||||||| |||| ||||||||||||| ||||    
T  2506051 catgtttgtaacatggatagtcattttagggacaatattaatcttcctaattctcatccttctgttttgggtcattgttacatgttcttagtcaataatc 2505952  T
Q  298 ggattttcgggctacttgatcggattgctc 327  Q
    || |||||||||||||||||||||||||||    
T  2505951 gggttttcgggctacttgatcggattgctc 2505922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 40 - 339
Target Start/End: Complemental strand, 25752620 - 25752322
Alignment:
Q  40 ggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttt 138  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  ||||||||||||    
T  25752620 ggatttttccggattttgtaatccggaaatttcaaaaaatagggcgcattacatgatgtttccagattacataatccgaaaaccccataaacaccctttt 25752521  T
Q  139 ttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaa 238  Q
    | |||||        |||||||||||||| ||||||| ||||| ||||||||| |||||||| ||||||||||| |||| ||||||| ||||||||| ||    
T  25752520 tcaaggtaaaac---agttcggattatatgatccgaaatgtattagcacaaattctaaacatgtttgtaacatggatagtcattttaaggacaatatcaa 25752424  T
Q  239 tcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 337  Q
    |||||||| |||| ||| || |  |||||||| ||| |||| |||||||||||||||||||| |||||||||||||||||| ||||||||  ||||||||    
T  25752423 tcttcctagctctcatctttatgtttttgggtgattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcagattgctccgaaacttcc 25752324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 38 - 339
Target Start/End: Complemental strand, 46440452 - 46440151
Alignment:
Q  38 acggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctt 136  Q
    |||| |||||||| ||||| |||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| |||||||| ||||||||||    
T  46440452 acgggtttttccgaattttataatccggaaacttaaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctt 46440353  T
Q  137 ttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatatt 236  Q
    ||| |||||        |||||||||||||||||||||| | ||||||||||||| ||||||||  |||||||||| |||  |||||||||||||||| |    
T  46440352 tttcaaggtaaaac---agttcggattatataatccgaactatatcagcacaaattctaaacatggttgtaacatggatattcattttagggacaatact 46440256  T
Q  237 aatcttcctaactcttatccttttattttgggtcattcttac--ttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaact 334  Q
    ||||||| ||||||| |||||| | |||| | ||||| ||||   |||||||| ||||||||||||||||||| |||||||||||||||||||  |||||    
T  46440255 aatcttcataactctcatccttctcttttagatcattgttacctgtgttcttaatcaaaaatcggattttcggactacttgatcggattgctccgaaact 46440156  T
Q  335 tcccc 339  Q
    |||||    
T  46440155 tcccc 46440151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 3 - 326
Target Start/End: Original strand, 7931612 - 7931931
Alignment:
Q  3 atgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcc 102  Q
    |||||||| | ||||  |||||||||||  |||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  7931612 atgttttcttttgttaaagggtgaaaaaatgagtaacgggtttttccggattttgcaatccggaaacttcaaaaaatagggcgcgttacattatgtttcc 7931711  T
Q  103 cgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacata 201  Q
     |||||||||||||| |||||||| |||||||||| |  || ||        |||||||||||||||||| ||| | ||| ||||||||| ||||||||     
T  7931712 ggattacataatccggaaaccccctaaacacccttctc-aatgtaaaac---agttcggattatataatctgaactatattagcacaaattctaaacatg 7931807  T
Q  202 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 301  Q
    ||||||||||| ||||  |||||||||||||||||||||||||||||||| |||| | | |||||||||||| |||| |||| || |||||||||||  |    
T  7931808 tttgtaacatggatagttattttagggacaatattaatcttcctaactctcatcc-tctgttttgggtcattgttacatgtttttggtcaaaaatcgagt 7931906  T
Q  302 tttcgggctacttgatcggattgct 326  Q
    |||||| ||||||| ||||||||||    
T  7931907 tttcggactacttggtcggattgct 7931931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 23523858 - 23524071
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||||| ||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23523858 tgatgttttcctttgttagagggtgaaaaatggagttacggattttttcggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgttt 23523957  T
Q  101 cccgattacataatcc-gaaaacccccaaacaccc-ttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaac 198  Q
    || ||||||||||||| |||| |||| |||||||| |||||||||||       || |||||||||||||||||  | ||||||||||||||||||||||    
T  23523958 ccggattacataatccagaaaccccctaaacaccctttttttaaggt---aaaataattcggattatataatccacactgtatcagcacaaatcctaaac 23524054  T
Q  199 atatttgtaacatgtat 215  Q
    |||||||||||||||||    
T  23524055 atatttgtaacatgtat 23524071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 44 - 339
Target Start/End: Original strand, 8106387 - 8106682
Alignment:
Q  44 ttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaa 142  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||  ||||||||||||||| |||||| ||||||| |||||  |    
T  8106387 ttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgctacatgatttttccgtattacataatccgaacaccccctaaacaccatttttcta 8106486  T
Q  143 ggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatattaatct 241  Q
    ||        |||||| |||||||||||||||| |||||||||||||||  ||||||| ||||||||||| |||| |||||||| || |||| |||||||    
T  8106487 gg--gaaaaatagttcagattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagaacaatgttaatct 8106584  T
Q  242 tcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    | |||||||| |||||| | ||||| |||||| |||| |||||||| ||||||||| | |||| ||||||||||||| |||| |||  ||||||||||    
T  8106585 ttctaactctcatccttctgttttgagtcattgttacctgttcttattcaaaaatcaggtttttgggctacttgatcagattactccgaaacttcccc 8106682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 158 - 337
Target Start/End: Complemental strand, 53894085 - 53893906
Alignment:
Q  158 cggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 257  Q
    |||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| |||||||||||||||||||||||| |||||||| |||||    
T  53894085 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatctttctaactctcatcct 53893986  T
Q  258 tttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 337  Q
    | | |||||||||||| |||| |||||||||||||||||||| ||||| | |||||||||||||||||||| ||||||||    
T  53893985 tctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaacttcc 53893906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 78 - 327
Target Start/End: Complemental strand, 31582560 - 31582313
Alignment:
Q  78 atagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaag 176  Q
    ||||||||| ||||||||||||| | |||||||||||||| |||||||| ||||||||||||| |||||        |||||||||||||||||| |||     
T  31582560 atagggcgcattacatgatgttttctgattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatctgaat 31582464  T
Q  177 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctt 276  Q
    ||||||||||||||| |||||||| ||||||||||| |||| ||||||| | ||||| ||||| ||||||||||| |||||| | |||||||||||| ||    
T  31582463 tgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatgaacaatgttaattttcctaactctcatccttctgttttgggtcattgtt 31582364  T
Q  277 acttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    || ||||||||||||||||||   ||||||||||| |||||||||||||||    
T  31582363 acatgttcttagtcaaaaatctagttttcgggctaattgatcggattgctc 31582313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 4 - 312
Target Start/End: Complemental strand, 3703462 - 3703155
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| ||||||||||||  ||||||||||||||| |||||||||||||||| ||||||||||||||||| || |||||||||| ||| |     
T  3703462 tgttttcctttgttatagggtgaaaaaatgagttacggattttttcggattttgtaatccgaaaacttcaaaaaataggacgtgttacatgattttttcg 3703363  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    ||||||||||| |||| |||||| ||||||| ||||| ||||         ||||  | ||||||||| | || ||||||||||||||| |||||||| |    
T  3703362 gattacataattcgaacaccccctaaacaccatttttcaagg--gaaaaacagttatggttatataattcaaactgtatcagcacaaattctaaacattt 3703265  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 302  Q
    |||||||||  |||| ||||||||| | ||||||||||||| ||||||| |||||| | |||| ||||| | |||| |  | ||||||||||||||||||    
T  3703264 ttgtaacatagatagtcattttaggaagaatattaatcttcataactctcatccttctgttttaggtcaatgttacctacttttagtcaaaaatcggatt 3703165  T
Q  303 ttcgggctac 312  Q
    ||||||||||    
T  3703164 ttcgggctac 3703155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 29822577 - 29822773
Alignment:
Q  7 tttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgat 106  Q
    |||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| | |||    
T  29822577 tttcctttgttatagggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatacagcgcgttacatgatgttttcggat 29822676  T
Q  107 tacataatccgaaaacccc-caaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttg 205  Q
    ||||||||||| |||||||  ||||||||| ||| |||||        | |||||||||||||||||||| ||||||||||||||| |||||||| ||||    
T  29822677 tacataatccggaaaccccataaacaccctctttcaaggtaaaac---aattcggattatataatccgaactgtatcagcacaaattctaaacatgtttg 29822773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 4 - 126
Target Start/End: Complemental strand, 25539160 - 25539038
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||      
T  25539160 tgttttcctttgttatatggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcatgttacatgatgtttctg 25539061  T
Q  104 gattacataatccgaaaaccccc 126  Q
    |||||||||||||| ||||||||    
T  25539060 gattacataatccggaaaccccc 25539038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 224 - 339
Target Start/End: Complemental strand, 54631486 - 54631371
Alignment:
Q  224 tagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 323  Q
    |||||||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||||||||||||| ||||||| |||||||||||||||    
T  54631486 tagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcggactacttgatcggatt 54631387  T
Q  324 gctctaaaacttcccc 339  Q
    |||| |||||||||||    
T  54631386 gctccaaaacttcccc 54631371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 52089315 - 52089473
Alignment:
Q  181 tcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttactt 280  Q
    |||||||||||| ||||||| ||||||||||| |||| |||||| |||||||||||||| ||||||||| | || ||| |  ||||||||||| |||| |    
T  52089315 tcagcacaaatcttaaacatgtttgtaacatggatagtcatttttgggacaatattaattttcctaactttcattcttctggtttgggtcattgttacct 52089414  T
Q  281 gttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||||||||||||||||||| |||| || ||||||||||||||||||  |||||||||||    
T  52089415 gttcttagtcaaaaatcgggtttttggactacttgatcggattgcttcaaaacttcccc 52089473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 163 - 327
Target Start/End: Complemental strand, 27742169 - 27742004
Alignment:
Q  163 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatattaatcttcctaactcttatcctttta 261  Q
    ||||||||  ||| |||||||||||||||  ||||||| ||||||||||  ||||  |||||||||| |||||||||||||||||||||| |||||| |     
T  27742169 tatataatttgaattgtatcagcacaaattttaaacatgtttgtaacataaatagttattttagggaacaatattaatcttcctaactctcatccttctg 27742070  T
Q  262 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    ||||| ||||||  ||| | |||||||||||||||||| |||||||||||||| ||||||||||||    
T  27742069 ttttgagtcattggtacattttcttagtcaaaaatcgggttttcgggctacttaatcggattgctc 27742004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 178 - 327
Target Start/End: Complemental strand, 41323132 - 41322983
Alignment:
Q  178 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 277  Q
    |||||| ||||||| |||||||| ||||||||||| |||  ||||||| ||||||||||||||||||||||||| |||||||| |||| ||||||| |||    
T  41323132 gtatcaacacaaattctaaacatgtttgtaacatggataatcattttatggacaatattaatcttcctaactctcatccttttgtttttggtcattgtta 41323033  T
Q  278 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
     ||||||||||| |||||| |  |||||||  ||||||||||||||||||    
T  41323032 attgttcttagttaaaaattgagttttcggcatacttgatcggattgctc 41322983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 54631659 - 54631489
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 119  Q
    |||||| ||||  |||| |||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||| |    
T  54631659 agggtggaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaagtatggcgcgttacatgatgtttccggattacataatccgga 54631560  T
Q  120 aaccccc-aaacaccctttttt-aaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaat 191  Q
    ||||||| ||||||  |||||| |||||        ||||||||||||| |||| ||| |||||||||||||||    
T  54631559 aaccccctaaacacatttttttcaaggtaaaac---agttcggattatacaatctgaactgtatcagcacaaat 54631489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 154 - 327
Target Start/End: Original strand, 7863544 - 7863717
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    |||||||||||||||||| ||| |||||| |||||||| |||||||| ||||||||||| | |  ||||||| ||||||||||||| ||||||||| |||    
T  7863544 agttcggattatataatctgaactgtatctgcacaaattctaaacatgtttgtaacatggacaatcattttaaggacaatattaatattcctaactttta 7863643  T
Q  254 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    ||||| | |||| |||||||  ||  |||||||| | ||||||  | |||||||||||||| ||| ||||||||    
T  7863644 tccttctgttttaggtcattggtaactgttcttaataaaaaattcggttttcgggctacttaatcagattgctc 7863717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 178 - 323
Target Start/End: Complemental strand, 25539019 - 25538873
Alignment:
Q  178 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattctt 276  Q
    |||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||| ||||||    |||||||||||| ||    
T  25539019 gtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaattttcttaactctcatccttccgtttttgggtcattgtt 25538920  T
Q  277 acttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 323  Q
    || | |||||||||||||||  | ||||| ||||||||||| |||||    
T  25538919 acctcttcttagtcaaaaatttggttttcaggctacttgattggatt 25538873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 4 - 126
Target Start/End: Original strand, 38416520 - 38416642
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| ||||||||||||  ||||| ||||||||| |  |||||||||||||||||| | |||||||||||| ||||||||||| ||| |     
T  38416520 tgttttcctttgttatagggtgaaaaaatgagttgcggattttttcaaattttgtaatccggaaacataaaaaaatagggcacgttacatgattttttcg 38416619  T
Q  104 gattacataatccgaaaaccccc 126  Q
    |||||||||||||||| ||||||    
T  38416620 gattacataatccgaacaccccc 38416642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 161 - 327
Target Start/End: Complemental strand, 14474268 - 14474103
Alignment:
Q  161 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 260  Q
    ||||||||||| ||| ||||||| |||||||  | ||||| ||||||||||| |||| | ||| ||  |||||||||||||||||||| || |||||| |    
T  14474268 attatataatctgaattgtatcaacacaaattttgaacatgtttgtaacatggatagtcgtttaaga-acaatattaatcttcctaaccctcatccttct 14474170  T
Q  261 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    ||||| ||||||| |||| |||||||  |||||||||   |||||  ||||||||||||||||||||    
T  14474169 attttaggtcattgttacctgttcttgatcaaaaatcctgttttcaagctacttgatcggattgctc 14474103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 246 - 335
Target Start/End: Original strand, 29822775 - 29822864
Alignment:
Q  246 aactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 335  Q
    |||||| |||||| | |||||||||||| |||| |||||||| |||||||| |||||||||||||||||||||||||||||| |||||||    
T  29822775 aactctcatccttctgttttgggtcattgttacatgttcttaatcaaaaattggattttcgggctacttgatcggattgctcaaaaactt 29822864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 53894206 - 53894108
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtt 99  Q
    |||||||||| | ||||  |||||||||||  || | |||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  53894206 tgatgttttcttttgttaaagggtgaaaaaatgactaacgggtttttccggattttgcaatcaggaaacttcaaaaaatagggcgcgttacatgatgtt 53894108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 27879651 - 27879792
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    ||||| |||||||||||| ||| ||||||||||||||| || |||||  |||||||||| || | ||||||| |||| |||||||| ||||||||||| |    
T  27879651 agttcagattatataatctgaactgtatcagcacaaattctgaacatgcttgtaacatgaatggtcattttaaggaccatattaatattcctaactctca 27879750  T
Q  254 tccttttattttgggtcattcttacttgttcttagtcaaaaa 295  Q
    |  |||| |||| | ||||| ||| |||||| ||||||||||    
T  27879751 taattttgttttagatcattgttagttgttcctagtcaaaaa 27879792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 202 - 339
Target Start/End: Original strand, 47456751 - 47456888
Alignment:
Q  202 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 301  Q
    ||||||||||| ||| | | |||| |||| |||||||||||||||| ||| |||||| | |||| ||||||| |||  | |||||||||||||||  | |    
T  47456751 tttgtaacatggataactagtttaaggaccatattaatcttcctaaatctcatccttatgttttaggtcattgttagatattcttagtcaaaaattcggt 47456850  T
Q  302 tttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||||||||||||||||| ||||||||  ||||||||||    
T  47456851 tttcgggctacttgatcagattgctccgaaacttcccc 47456888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 154 - 296
Target Start/End: Original strand, 37222064 - 37222206
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaa-tcttcctaactctt 252  Q
    |||||||||||||||||  ||| |||||||||| |||| |||||||| ||||||||||| ||| ||| |||| |||| ||||||| ||||| ||| |||     
T  37222064 agttcggattatataatttgaattgtatcagcataaattctaaacatgtttgtaacatggataaccactttaaggaccatattaattcttcttaa-tctc 37222162  T
Q  253 atccttttattttgggtcattcttacttgttcttagtcaaaaat 296  Q
    ||| || | |||||||||||| ||| ||||||||||| ||||||    
T  37222163 atcattctgttttgggtcattgttagttgttcttagtaaaaaat 37222206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 50392592 - 50392529
Alignment:
Q  33 gagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgat 96  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  50392592 gagttacggatttttccggattttgtaatccggaaatctcaaaaaatggggcgcgttacatgat 50392529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 38417020 - 38417080
Alignment:
Q  279 ttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  38417020 ttgttcttagtcaaaaatcgggttttcgagctacttgatcggagtgctctaaaacttcccc 38417080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 260 - 327
Target Start/End: Complemental strand, 49001518 - 49001451
Alignment:
Q  260 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    |||||||||||||| |||  ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  49001518 tattttgggtcattgttaactgttcatagtcaaaaatctgattttcgggctacttgatcggattgctc 49001451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 155 - 285
Target Start/End: Complemental strand, 42497939 - 42497809
Alignment:
Q  155 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttat 254  Q
    ||||||||||||||||| ||| |||||||||||||||  | | | | |||||||| | |||||| | |||| |||| ||||||||||| |||||||| ||    
T  42497939 gttcggattatataatctgaattgtatcagcacaaattatgagcttgtttgtaacttatatagctagtttaaggaccatattaatctttctaactctcat 42497840  T
Q  255 ccttttattttgggtcattcttacttgttct 285  Q
    | |||| |||| ||||||| ||| |||||||    
T  42497839 cattttgttttaggtcattgttagttgttct 42497809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 156 - 250
Target Start/End: Complemental strand, 49002916 - 49002822
Alignment:
Q  156 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 250  Q
    |||| |||||||| ||| || | ||||||||||||| ||||| || ||||||||||  |||| ||||||| ||| ||||||||||||||||||||    
T  49002916 ttcgaattatatattccaaactatatcagcacaaattctaaatatgtttgtaacataaatagtcattttatggaaaatattaatcttcctaactc 49002822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 154 - 258
Target Start/End: Complemental strand, 25140570 - 25140466
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    |||||||||||  |||| ||||  | |||| ||| ||| || ||||| |||||||||||||||  ||||||| | ||||||||||||||||||||||| |    
T  25140570 agttcggattacgtaattcgaatagcatcaacaccaattctgaacatgtttgtaacatgtataatcattttaagaacaatattaatcttcctaactctca 25140471  T
Q  254 tcctt 258  Q
    |||||    
T  25140470 tcctt 25140466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 154 - 246
Target Start/End: Complemental strand, 25140779 - 25140687
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttccta 246  Q
    |||||||||||  |||||||||  | |||||||| ||| || ||||| ||||||||||| |||| ||||||  ||||||||||||||||||||    
T  25140779 agttcggattacgtaatccgaacagcatcagcaccaattctgaacatgtttgtaacatggatagtcattttgaggacaatattaatcttccta 25140687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 164 - 251
Target Start/End: Original strand, 47784101 - 47784188
Alignment:
Q  164 atataatccgaagtgtatcagcacaaatcctaaaca-tatttgtaacatgtatagccattttagggacaatattaatcttcctaactct 251  Q
    |||||||||||| | ||||||||||||| ||||||| | ||||||| ||| |||| ||||||| |||||||||||||| ||||||||||    
T  47784101 atataatccgaactatatcagcacaaattctaaacattgtttgtaatatggatagtcattttaaggacaatattaatc-tcctaactct 47784188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 47873953 - 47874037
Alignment:
Q  194 taaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttac 278  Q
    ||||||| ||| ||||||| |||| ||||||||||||||||||||||||| ||| ||| |||||| | |||||| ||||| ||||    
T  47873953 taaacatgtttataacatggatagtcattttagggacaatattaatcttcttaattctcatccttctgttttggatcattgttac 47874037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 335
Target Start/End: Complemental strand, 55838978 - 55838875
Alignment:
Q  232 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaa 331  Q
    |||||||||| ||||||||| |||||| | |||| ||||||| ||| ||||||  |||| |||||  | |||||||||||||| | | ||||||||||||    
T  55838978 atattaatctccctaactctaatccttatgttttaggtcattgttagttgttcccagtcgaaaatttggttttcgggctacttaaccagattgctctaaa 55838879  T
Q  332 actt 335  Q
    ||||    
T  55838878 actt 55838875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 25140944 - 25140894
Alignment:
Q  196 aacatatttgtaacatgtatagccattttagggacaatattaatcttccta 246  Q
    ||||| ||||||||||| |||| ||||||| ||||||||||||||||||||    
T  25140944 aacatgtttgtaacatggatagtcattttaaggacaatattaatcttccta 25140894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 4936666 - 4936614
Alignment:
Q  280 tgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaa 332  Q
    |||||||||| ||||||| |||||| |||||| ||||||||||||||| ||||    
T  4936666 tgttcttagttaaaaatctgatttttgggctatttgatcggattgctccaaaa 4936614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 328
Target Start/End: Complemental strand, 55774800 - 55774704
Alignment:
Q  232 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctct 328  Q
    |||||||||| ||||||||| |||||| | |||| ||||||| ||| ||||||  |||| |||||  | |||||||||||||| | | |||||||||    
T  55774800 atattaatctccctaactctaatccttatgttttaggtcattattagttgttcccagtcgaaaatttggttttcgggctacttaaccagattgctct 55774704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 1788175 - 1788238
Alignment:
Q  232 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaa 295  Q
    |||||||||||| ||||||| || ||| | |||| ||||||| ||||||||||||||| |||||    
T  1788175 atattaatcttcataactctcattcttctgttttaggtcattgttacttgttcttagtaaaaaa 1788238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 38416937 - 38417004
Alignment:
Q  161 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaaca-tgtatagccattttagg 227  Q
    ||||||||||| ||| |||||||||||||||  ||||||| ||||||||| || |||| |||||||||    
T  38416937 attatataatctgaactgtatcagcacaaattttaaacatgtttgtaacattggatagtcattttagg 38417004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 39118308 - 39118367
Alignment:
Q  214 atagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcatt 273  Q
    ||||||| |||| |||| ||||||||||| ||||||||||||||| || ||| |||||||    
T  39118308 atagccagtttaaggaccatattaatcttactaactcttatccttctaatttaggtcatt 39118367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 335
Target Start/End: Original strand, 20078719 - 20078832
Alignment:
Q  222 tttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcgga 321  Q
    |||| |||| |||||||| |||||| |||  |||||| | |||| ||||||| ||| |  ||||||||  |||||| | |||| |||||||||||||  |    
T  20078719 tttaaggaccatattaatattcctagctcgcatccttctgttttaggtcattgttagtctttcttagtttaaaatctggtttttgggctacttgatcaaa 20078818  T
Q  322 ttgctctaaaactt 335  Q
    ||||||| ||||||    
T  20078819 ttgctctgaaactt 20078832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 46381180 - 46381079
Alignment:
Q  206 taacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttc 305  Q
    ||||||| ||| ||| |||| |||| |||||||||||| ||||||| || |||   |||| | ||||| ||| || |||||||||||||||| | |||||    
T  46381180 taacatggataaccagtttaaggaccatattaatcttcataactctcattcttcagttttagatcattgttagttattcttagtcaaaaatctggttttc 46381081  T
Q  306 gg 307  Q
    ||    
T  46381080 gg 46381079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 154 - 246
Target Start/End: Original strand, 32600943 - 32601035
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttccta 246  Q
    ||||| |||||||| ||  ||| ||||||||||||||| || |||||  ||||||||||   || ||||||| |||| |||||||| ||||||    
T  32600943 agttcagattatatgatatgaattgtatcagcacaaattctgaacatgcttgtaacatggccagtcattttaaggaccatattaatattccta 32601035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 191; Significance: 1e-103; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 4 - 307
Target Start/End: Complemental strand, 36949152 - 36948851
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |     
T  36949152 tgttttcctttgttatagggtgaaaaatggagttacggatttttccggattttgtaatctgcaaacttcaaaaaatagggcgcgttacatgatgttttcg 36949053  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    |||||||||||||| |||||||| ||||||| ||| |||||||       ||||| |||||||||||||| || ||||||||||||||||||||||||||    
T  36949052 gattacataatccggaaaccccctaaacaccatttgttaaggtaaaa---tagtttggattatataatccaaactgtatcagcacaaatcctaaacatat 36948956  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 302  Q
    || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||| ||||||||||||||||| || ||    
T  36948955 ttataacatgtatagctattttagggacaatattaatcttcctaactcttatccttttgttttgggtaattgttacctgttcttagtcaaaaattgggtt 36948856  T
Q  303 ttcgg 307  Q
    |||||    
T  36948855 ttcgg 36948851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 39447106 - 39447441
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||  |||||||||||  |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  39447106 tgatgttttcttttgttaaagggtgaaaaaatgagtaacggatttttccggattttgtaatccgaaaacttcaaaaaatagggcgcattacatgatgttt 39447205  T
Q  101 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
     | |||||||||||| | |||||||  ||||||||||||| |||||       |||||||||||||||||| | || ||||||||||||||| |||||||    
T  39447206 tcggattacataatctggaaaccccataaacaccctttttcaaggtaaaa---tagttcggattatataattcaaactgtatcagcacaaattctaaaca 39447302  T
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 299  Q
    | ||||||||||| |||| |||||||  |||||||||||||||||||||||| |||||| |||||||||||||| |||| ||||||||||||||||||||    
T  39447303 tgtttgtaacatggatagtcattttaaagacaatattaatcttcctaactctcatccttctattttgggtcattgttacatgttcttagtcaaaaatcgg 39447402  T
Q  300 attttcgggctacttgatcggattgctctaaaacttccc 338  Q
     | ||| | || ||||||||||||||||| |||||||||    
T  39447403 gtcttccgactgcttgatcggattgctctgaaacttccc 39447441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 32188080 - 32187743
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatg-gagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtt 99  Q
    |||||||||| | ||||  |||||||||||   |||| |||| |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  32188080 tgatgttttcttttgttaaagggtgaaaaaaatgagtaacgggtttttctggattttgtaatctggaaacttcaaaaaatagggcgagttacatgatgtt 32187981  T
Q  100 tcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaac 198  Q
    ||| |||||||||||||| |||||||| ||||||| ||||| |||||        |||||||||||||||||||||| |||||||||||||||  ||||     
T  32187980 tccggattacataatccggaaacccccgaaacaccatttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattttaaat 32187884  T
Q  199 atatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcg 298  Q
    || ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||| ||||||| |||||||||||    
T  32187883 atgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttggtcaaaaatcg 32187784  T
Q  299 gattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    | ||||||| |||||||||||||||||||  ||||||||||    
T  32187783 ggttttcggactacttgatcggattgctccgaaacttcccc 32187743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 33452653 - 33452329
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||  |||||| ||||  |||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33452653 tgatgttttcttttgttaaagggtggaaaaatgagtaacggatttttctggattttgtaattcggaaacttcaaaaaatagggcgcgttacatgatgttt 33452554  T
Q  101 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
    || ||| |||||||||| |||| ||| ||||||||||||| |||||        |||||||||||||||||||||| ||||| ||||||||| |||||||    
T  33452553 ccggatcacataatccggaaactccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtattagcacaaattctaaaca 33452457  T
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 299  Q
    | ||||||||||| |||  ||||||||||||||||||||||||||||||||| || ||||| ||||||||| || |||  ||||||||||||||||||||    
T  33452456 tgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcattcttttgttttgggtctttgttatctgttcttagtcaaaaatcgg 33452357  T
Q  300 attttcgggctacttgatcggattgctc 327  Q
     |||  || |||||||||||||||||||    
T  33452356 gtttctggactacttgatcggattgctc 33452329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 33 - 338
Target Start/End: Complemental strand, 41510606 - 41510304
Alignment:
Q  33 gagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaaca 131  Q
    |||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| | |||||||| |||||    
T  41510606 gagtaacggatttttccagatttcgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataatctggaaaccccctaaaca 41510507  T
Q  132 cccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggaca 231  Q
    ||| |||| |||||        ||| |||||||||||||| ||| ||||||||||||| | |||||||| ||||||||||| |||| |||||||||||||    
T  41510506 ccccttttcaaggtaaaac---agtccggattatataatctgaactgtatcagcacaatttctaaacatgtttgtaacatg-atagtcattttagggaca 41510411  T
Q  232 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaa 331  Q
    |||||||||||||||||||| |||||| | |||||||||||| ||||||||||||||| |||||  || |||||||||||||||||||||||||||  ||    
T  41510410 atattaatcttcctaactctcatccttctgttttgggtcattgttacttgttcttagttaaaaactgggttttcgggctacttgatcggattgctccgaa 41510311  T
Q  332 acttccc 338  Q
    |||||||    
T  41510310 acttccc 41510304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 44465938 - 44465633
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgat-gtt 99  Q
    |||||||||| | ||||  |||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  44465938 tgatgttttcttttgttaaagggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatagtt 44465839  T
Q  100 tcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaac 198  Q
    |   ||||||||| |||| |||||||| ||||||||||||| |||||        |||||||||||||||||||||| ||||||||||||||| ||||||    
T  44465838 tatggattacatactccggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaaatgtatcagcacaaattctaaac 44465742  T
Q  199 atatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcg 298  Q
    || |||||||||||  ||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||| | ||||||||||||||||     
T  44465741 atgtttgtaacatggttagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctcttcttagtcaaaaatca 44465642  T
Q  299 gattttcgg 307  Q
    | |||||||    
T  44465641 ggttttcgg 44465633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 20 - 339
Target Start/End: Complemental strand, 15995305 - 15994987
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa-tagggcgcgttacatgatgtttcccgattacataatccga 118  Q
    |||||||||||   ||| |||| |||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||    
T  15995305 agggtgaaaaaattagtaacgggtttttccggattttgtaatcgggaaacttcaaaaaaatagggcgcgttgcatgatgtttccggattacataatccga 15995206  T
Q  119 aaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatag 217  Q
    |||||||| ||||||||||||| ||| |        ||||||||||||||||| |||| |||||||||| |||| |||||||| ||||||||||| ||||    
T  15995205 aaaccccctaaacaccctttttcaagctaaaac---agttcggattatataattcgaactgtatcagcaaaaattctaaacatgtttgtaacatggatag 15995109  T
Q  218 ccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 317  Q
     ||||||| |||||||||||||||| |||||||| ||| || | |||||||||||| |||| |||||||||| |||||| |||||||| | ||| |||||    
T  15995108 tcattttatggacaatattaatctttctaactctcatcattctgttttgggtcattgttacatgttcttagtaaaaaattggattttcagactatttgat 15995009  T
Q  318 cggattgctctaaaacttcccc 339  Q
    ||||||||||  ||||||||||    
T  15995008 cggattgctccgaaacttcccc 15994987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 49 - 339
Target Start/End: Complemental strand, 41855061 - 41854778
Alignment:
Q  49 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnn 147  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||| ||||| |||||||| ||||||||||||| |||||      
T  41855061 cggattttgtaatccggaaacttcaaaaaatagggtgtgttacatgatgtttccggattacatgatccggaaaccccctaaacaccctttttcaaggtaa 41854962  T
Q  148 nnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 247  Q
          |||||||||||||||||  ||| ||||||||||||||| |||||||| |||||||     |||| ||||| |||||||||||||||||||||||    
T  41854961 aac---agttcggattatataatttgaactgtatcagcacaaattctaaacatgtttgtaa-----atagtcatttcagggacaatattaatcttcctaa 41854870  T
Q  248 ctcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    |||| |||||| | ||||| |||||| |||  |||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||    
T  41854869 ctctcatccttctgttttgagtcattgttatctgttcttagttaaaaaccggatttttgggctacttgatcggattgctctgaaacttcccc 41854778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 49 - 339
Target Start/End: Original strand, 42894369 - 42894657
Alignment:
Q  49 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnn 147  Q
    |||||| | |||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| |||||||| ||||||| ||||| |||||      
T  42894369 cggattatataatccggaaacttaaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaa 42894468  T
Q  148 nnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 247  Q
          ||| ||||||||||| |||||| ||||||||||||||| |||||||| ||| ||||||| |||  |||||||||||||||||||||||||||||    
T  42894469 aac---agtccggattatatattccgaactgtatcagcacaaattctaaacatgtttctaacatggataatcattttagggacaatattaatcttcctaa 42894565  T
Q  248 ctcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||||  ||||| | |||||||||||| |||| ||||||||| |||||||||  ||||||| ||||||||||||||| |||  ||||||||||    
T  42894566 ctctcttccttctgttttgggtcattgttacatgttcttaggcaaaaatcgagttttcggactacttgatcggattactccgaaacttcccc 42894657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 22 - 305
Target Start/End: Complemental strand, 17474988 - 17474707
Alignment:
Q  22 ggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaa 121  Q
    |||||||||  |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||    
T  17474988 ggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaactttaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaa 17474889  T
Q  122 ccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagcca 220  Q
    ||||| ||||||  ||||| |||||        |||| ||||||||||||||||| |||||||||||||||  ||||||| ||||||||||| |||| ||    
T  17474888 ccccctaaacacaatttttcaaggtaaaac---agtttggattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtca 17474792  T
Q  221 ttttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttc 305  Q
    |||||| |||||||||||||||||||||||| ||  || | || || | |||| |||| ||||||| |||||||||||| |||||    
T  17474791 ttttagagacaatattaatcttcctaactctcataattctgttatgcggcattgttacctgttcttcgtcaaaaatcgggttttc 17474707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 45154001 - 45153708
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||  |||||||||||  |||| |||| |||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  45154001 tgatgttttcttttgttaaagggtgaaaaaatgagtaacgggtttttctgaattttgtaatctggaaacttcaaaaaatagggcgcgttacatgatgttt 45153902  T
Q  101 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
    || |||||||||||||| |||||||| ||||||||||||| |||||        ||||  |||||||||||  ||| ||||||||||||| |  ||||||    
T  45153901 ccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agtttagattatataatttgaactgtatcagcacaagttataaaca 45153805  T
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaat 296  Q
    | ||||||||||| |||| ||||||||||||||||||||||||| ||||||| |||||| | |||||||||||| |||| ||||||||||| |||||    
T  45153804 tgtttgtaacatggatagtcattttagggacaatattaatcttcttaactctcatccttctgttttgggtcattgttacctgttcttagtccaaaat 45153708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 4 - 339
Target Start/End: Original strand, 5507363 - 5507699
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttc-- 101  Q
    ||||||||| |||| || |||||||||  ||||||| ||||||| || ||||||||||||  ||||||||||||||| | ||||||||||||| |||       
T  5507363 tgttttcctttgttatatggtgaaaaaatgagttacagattttttcgaattttgtaatccaaaaacttcaaaaaataagacgcgttacatgatttttttt 5507462  T
Q  102 ccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacat 200  Q
    | ||||| |||||||||| |||||| ||||||| ||| ||||||        ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  5507463 cggattatataatccgaacaccccctaaacaccttttcttaagg--aaaaaatagttcggattatataatccgaactgtatcagcacaaattctaaacat 5507560  T
Q  201 atttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgga 300  Q
     ||||||||||| |||| |||||||   |||||||||||||||  |||||| || ||| | ||||||||||||  ||| |||||||||||||||||| |     
T  5507561 gtttgtaacatggatagtcattttataaacaatattaatcttcacaactctcattcttctgttttgggtcattgctacctgttcttagtcaaaaatcagg 5507660  T
Q  301 ttttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||||||||| |||||||||||||||||  ||||||||||    
T  5507661 ttttcgggcaacttgatcggattgctccgaaacttcccc 5507699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 25218000 - 25217660
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||  |||||||||||  |||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25218000 tgatgttttcttttgttaaagggtgaaaaaatgagtaacggattttttcggattttgtaatccggaaacttcaaaaaatagggtgcgttacatgatgttt 25217901  T
Q  101 cccgattacataatccgaaaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataat----------------ccgaagtgtatcag 184  Q
    || |||||||||||||| ||||||| |||||||| |||| |||||        |||||||||||||||||                | ||| ||||| ||    
T  25217900 ccggattacataatccggaaacccctaaacaccccttttcaaggtaaaac---agttcggattatataattgtagataatataatccggaactgtattag 25217804  T
Q  185 cacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgtt 283  Q
    ||||||| |||||||| |||||| |||| |||| |||||| |||||||| |||||||||||||||||  ||||| |  |||||||||||| |||| ||||    
T  25217803 cacaaattctaaacatgtttgtagcatggatagtcattttggggacaattttaatcttcctaactctcttccttctgtttttgggtcattgttacctgtt 25217704  T
Q  284 cttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    |||||| ||||||||| |||||||||||||||||||||||||||    
T  25217703 cttagtaaaaaatcgggttttcgggctacttgatcggattgctc 25217660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 39 - 339
Target Start/End: Complemental strand, 41203358 - 41203060
Alignment:
Q  39 cggatttttccggattttgtaatccggaaacttcaaaaaa-tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctt 136  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||  ||||| || ||||  |||||||||||||||| |||||  ||||||||||    
T  41203358 cggatttttccggattttgtaatccggaaactacaaaaaaatagggtgc--tacataatttttctggattacataatccgaacaccccgtaaacaccctt 41203261  T
Q  137 ttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatatt 236  Q
    ||| |||          ||||| |||||||||| ||||| |||||||||||||||  ||||||| ||||||||||| |||| ||||||| ||||||||||    
T  41203260 tttaaag--agaaaaacagttcagattatataaaccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttatggacaatatt 41203163  T
Q  237 aatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 336  Q
    ||||||||||||| | |||||| | |||||||||||| |||| |||||||||| |||||| |||||||||||| |||||||||||||||||  |||||||    
T  41203162 aatcttcctaactttcatccttctgttttgggtcattgttacctgttcttagttaaaaattggattttcgggcaacttgatcggattgctccgaaacttc 41203063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 49 - 327
Target Start/End: Original strand, 36874977 - 36875253
Alignment:
Q  49 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccca-aacacccttttttaaggtnn 147  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||| |  |||||| ||||| |||||      
T  36874977 cggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccctctgaacaccatttttcaaggtaa 36875076  T
Q  148 nnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 247  Q
          ||| ||||||||||||||| || ||||| |||| |||| |||||||  ||||||||||| |||| ||||||||||| |||||||||||||||||    
T  36875077 aac---agtccggattatataatccaaactgtattagcataaattctaaacaagtttgtaacatggatagtcattttagggataatattaatcttcctaa 36875173  T
Q  248 ctcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    |||| |||||| | |||||||||||| ||||  |||||||| |||||||||| ||||| | |||||| |||| |||||||    
T  36875174 ctctcatccttctgttttgggtcattgttacccgttcttaggcaaaaatcgggttttcagactacttaatcgaattgctc 36875253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 4 - 327
Target Start/End: Original strand, 34517048 - 34517369
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| || |||||||||  |||||||| |||||| ||||||||||||||   |||  |||||||||||||||||||||||||| ||||      
T  34517048 tgttttcctttgttatacggtgaaaaaatgagttacgaattttttcggattttgtaatcgaaaaatctcaaaaaatagggcgcgttacatgatttttcg- 34517146  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    ||||||||||||| || |||||  ||||||| ||||| ||||         |||| ||||||||||||||||| ||||||||||||||| |||||||| |    
T  34517147 gattacataatccaaataccccttaaacaccatttttcaagggaaaaac--agtttggattatataatccgaactgtatcagcacaaattctaaacatgt 34517244  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 302  Q
      |||||||| |||| ||||||| | |||||||||||| || ||||| | |||||||| |||||||||||| |||| ||||||||||||||||| || ||    
T  34517245 cggtaacatggatagtcattttatgaacaatattaatcatcataactttcatccttttgttttgggtcattgttacctgttcttagtcaaaaattgggtt 34517344  T
Q  303 ttcgggctacttgatcggattgctc 327  Q
    |||||  ||||||||||||||||||    
T  34517345 ttcggaatacttgatcggattgctc 34517369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 160 - 336
Target Start/End: Complemental strand, 19110068 - 19109892
Alignment:
Q  160 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 259  Q
    ||||||||||||| || | |||||||||||||  |||| || ||||||||||| || | ||||||| ||| ||||||||||||||||||||| |||||||    
T  19110068 gattatataatccaaactatatcagcacaaattttaaatatctttgtaacatggatcgtcattttaaggataatattaatcttcctaactctcatccttt 19109969  T
Q  260 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 336  Q
    |||||||||||||| |||  ||||||||||||||||||   |||| || |||||||||||||||||||  |||||||    
T  19109968 tattttgggtcattgttagctgttcttagtcaaaaatccagtttttggactacttgatcggattgctccgaaacttc 19109892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 155 - 324
Target Start/End: Complemental strand, 16750485 - 16750318
Alignment:
Q  155 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttat 254  Q
    |||||||||||||||| |||| |||||||||| |||| ||||  || ||||||| ||| |||| ||||||||| ||||||||||||||| ||||||| ||    
T  16750485 gttcggattatataattcgaactgtatcagcataaattctaat-atgtttgtaatatggatagtcattttaggaacaatattaatcttc-taactctcat 16750388  T
Q  255 ccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattg 324  Q
    |||| | |||||||||||| |||  |||||||||| ||||||||||||||||| ||||||||||||||||    
T  16750387 ccttctgttttgggtcattgttatctgttcttagtaaaaaatcggattttcggactacttgatcggattg 16750318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 154 - 317
Target Start/End: Original strand, 8388746 - 8388909
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    ||||| ||||||||| |||||| ||||||||||||||| ||||| || ||||||||||| || ||||| ||| ||||||||||||||||||||||||| |    
T  8388746 agttcagattatatagtccgaaatgtatcagcacaaattctaaagatgtttgtaacatggattgccatcttatggacaatattaatcttcctaactctca 8388845  T
Q  254 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 317  Q
    |||||   |||||||||||| ||   ||||||||||| |||||||| |||||| ||||||||||    
T  8388846 tccttcagttttgggtcattgttggctgttcttagtctaaaatcgggttttcgagctacttgat 8388909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 161 - 327
Target Start/End: Original strand, 35251032 - 35251198
Alignment:
Q  161 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 260  Q
    |||||||||||| || ||||| ||||||||| || |   | ||||||| ||| ||||||| |||| |||| |||||||||||| |||||| ||||||| |    
T  35251032 attatataatccaaactgtattagcacaaattctgagtttgtttgtaatatggatagccagtttaaggaccatattaatcttcttaactcctatccttct 35251131  T
Q  261 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    ||||| ||||||| ||| |||||||||||| |||||| | |||||||||||||||||| ||||||||    
T  35251132 attttaggtcattgttagttgttcttagtcgaaaatccggttttcgggctacttgatcagattgctc 35251198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 43 - 145
Target Start/End: Complemental strand, 4268406 - 4268303
Alignment:
Q  43 tttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccc-caaacaccctttttta 141  Q
    ||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||  ||||||||||||| |    
T  4268406 ttttttcggattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccataaacaccctttttca 4268307  T
Q  142 aggt 145  Q
    ||||    
T  4268306 aggt 4268303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 214 - 337
Target Start/End: Original strand, 30763804 - 30763927
Alignment:
Q  214 atagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctact 313  Q
    |||| ||||||| ||||||||||||||||||||||||| ||| || | |||| ||||||| |||  |||||||||||||||||| |||||| |||| |||    
T  30763804 atagtcattttatggacaatattaatcttcctaactctcatctttctgtttttggtcattgttagctgttcttagtcaaaaatctgatttttgggcaact 30763903  T
Q  314 tgatcggattgctctaaaacttcc 337  Q
    ||||||||||||||  ||||||||    
T  30763904 tgatcggattgctccgaaacttcc 30763927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 162 - 339
Target Start/End: Original strand, 42478846 - 42479023
Alignment:
Q  162 ttatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttta 261  Q
    |||||||||| ||| |||||||||||||||  | |   ||||||||| ||  ||| ||| |||| |||| |||||||||||||||||||| |||||| |     
T  42478846 ttatataatctgaaatgtatcagcacaaattttgagtttatttgtaatatagataaccagtttaaggaccatattaatcttcctaactctcatccttatg 42478945  T
Q  262 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    |||| ||||||| |||   ||||| ||||||||||    |||||||||||||||||| ||||||||| ||||||||||    
T  42478946 ttttaggtcattgttagccgttctcagtcaaaaattcagttttcgggctacttgatcagattgctctgaaacttcccc 42479023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 206 - 339
Target Start/End: Complemental strand, 38308840 - 38308706
Alignment:
Q  206 taacatgtatagccattttagggacaatattaatcttccta--actcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattt 303  Q
    ||||||| || | ||||||| ||||||||||||||||| ||  ||| | |||||| | ||||||||| || |||| ||||||||||||||||||||  ||    
T  38308840 taacatggattgtcattttatggacaatattaatcttcttataactatcatccttctgttttgggtc-ttgttacctgttcttagtcaaaaatcgggatt 38308742  T
Q  304 tcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||||||||||||||| ||||||||| ||||||||||    
T  38308741 tcgggctacttgatcagattgctctgaaacttcccc 38308706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 161 - 335
Target Start/End: Original strand, 45293743 - 45293916
Alignment:
Q  161 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 260  Q
    ||||||||||| ||| ||||||||||||||| || | | || || ||||||| ||| ||  |||| ||   |||||||||||||||||||| ||| || |    
T  45293743 attatataatctgaactgtatcagcacaaattctgatc-taattataacatggataaccggtttaagggtcatattaatcttcctaactctcatctttct 45293841  T
Q  261 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 335  Q
     |||| |||||||  || ||||||||||||||||||| | ||||||||||||||||||  |||||||| ||||||    
T  45293842 gttttaggtcattgctagttgttcttagtcaaaaatccggttttcgggctacttgatcatattgctctgaaactt 45293916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 23 - 140
Target Start/End: Complemental strand, 9847613 - 9847495
Alignment:
Q  23 gtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaac 122  Q
    ||||||||  ||||||| ||||||||| |||||||||||||| |||  ||||||||| |||||||||||||||| ||| |  ||||||||||||||| ||    
T  9847613 gtgaaaaaatgagttactgatttttccagattttgtaatccgaaaatctcaaaaaattgggcgcgttacatgattttttcgtattacataatccgaacac 9847514  T
Q  123 c-cccaaacaccctttttt 140  Q
    |  ||||||||| ||||||    
T  9847513 catccaaacaccttttttt 9847495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 33366920 - 33366996
Alignment:
Q  49 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc 126  Q
    |||||||||||||||| |||||||||||| || | ||||||||||||| ||||| |||||||||||||||||||||||    
T  33366920 cggattttgtaatccgaaaacttcaaaaa-taagacgcgttacatgatatttccggattacataatccgaaaaccccc 33366996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 153 - 323
Target Start/End: Original strand, 26228160 - 26228330
Alignment:
Q  153 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 252  Q
    |||||||| ||||||||| |||| |||||||||| | ||  | ||  | ||||| ||||| ||| | | ||||  ||| ||||||||||| ||||||||     
T  26228160 tagttcgggttatataattcgaactgtatcagcatacattatgaatctgtttgtgacatggataactagtttaatgaccatattaatcttgctaactctc 26228259  T
Q  253 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 323  Q
    |||||||| |||| ||| ||| ||| |||||||||||||||||||   |||||| ||||||||||| ||||    
T  26228260 atccttttgttttaggtaattgttagttgttcttagtcaaaaatctagttttcgagctacttgatcagatt 26228330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 37773827 - 37773700
Alignment:
Q  202 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatc--gg 299  Q
    ||||||||||| ||||||| |||| |||| || |||||||| |||||||| |||||| | |||| | ||||| ||| |||||||||||||||| ||  |     
T  37773827 tttgtaacatggatagccagtttaaggactatgttaatctttctaactctcatccttctgttttagttcattgttagttgttcttagtcaaaagtccagt 37773728  T
Q  300 attttcgggctacttgatcggattgctct 328  Q
    ||||| ||||||||||||| |||||||||    
T  37773727 atttt-gggctacttgatcagattgctct 37773700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 50 - 243
Target Start/End: Complemental strand, 38066834 - 38066643
Alignment:
Q  50 ggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccccaaacacccttttttaaggtnnnn 149  Q
    ||||||| ||||||| |||||||||||||||||| | |||| ||||| ||| | |||||||||| || || ||||  |||||||| |||| ||||         
T  38066834 ggattttataatccgaaaacttcaaaaaatagggtgtgttatatgattttttcggattacataacccaaacacccataaacaccccttttcaagggaaaa 38066735  T
Q  150 nnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttc 243  Q
        |||||  ||||||||| |||||  |||| | ||||||| ||||| || ||||||| ||| |||| ||||||| |||||||||||||||||    
T  38066734 ac--agttcatattatataaaccgaacagtattaacacaaattctaaatatgtttgtaaaatggatagtcattttaaggacaatattaatcttc 38066643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 196 - 258
Target Start/End: Complemental strand, 17766846 - 17766784
Alignment:
Q  196 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 258  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||||||||||||||||| ||||||    
T  17766846 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactctcatcctt 17766784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 38308954 - 38308880
Alignment:
Q  51 gattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccc 125  Q
    |||| ||||||||| |||||||||||||||||||||| ||  |||| ||||| ||||| |||||||||| |||||    
T  38308954 gattatgtaatccgaaaacttcaaaaaatagggcgcgctatttgatttttccggattatataatccgaacacccc 38308880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 262 - 335
Target Start/End: Complemental strand, 13704763 - 13704690
Alignment:
Q  262 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 335  Q
    |||| ||| ||| ||| ||||| | ||||||||||| |||||||||||||||||||| ||||||||| ||||||    
T  13704763 ttttaggttattgttagttgttttcagtcaaaaatccgattttcgggctacttgatcagattgctctgaaactt 13704690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 9847440 - 9847386
Alignment:
Q  193 ctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 247  Q
    ||||||||||||||||| |  |||| ||||||| |||||||||||||||||||||    
T  9847440 ctaaacatatttgtaacgtcgatagtcattttaaggacaatattaatcttcctaa 9847386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 25715310 - 25715427
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttc--cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttc 101  Q
    ||||||||| ||||  |||||||||||  |||||||  ||||||   |||| ||||||||||  |||  |||||| |||||||||||||| |||| |||     
T  25715310 tgttttcctttgttaaagggtgaaaaaatgagttacaaattttttttcggactttgtaatccaaaaatctcaaaagatagggcgcgttacctgatttttt 25715409  T
Q  102 ccgattacataatccgaa 119  Q
    | ||||||||||||||||    
T  25715410 cggattacataatccgaa 25715427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 258
Target Start/End: Complemental strand, 34519554 - 34519492
Alignment:
Q  196 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 258  Q
    ||||| ||||||||||| |||  ||||||| ||||||||||||||||||||||| | ||||||    
T  34519554 aacatgtttgtaacatggataatcattttaaggacaatattaatcttcctaactttcatcctt 34519492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 335
Target Start/End: Original strand, 34817219 - 34817377
Alignment:
Q  177 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctt 276  Q
    ||||||||||| ||| || ||| | ||||||||||| ||| ||| | || |||| |||||||||||||||||| | |||||  | |||| ||||||| ||    
T  34817219 tgtatcagcaccaattctgaacttgtttgtaacatggataaccaatgtaaggaccatattaatcttcctaactatcatcctcatgttttaggtcattgtt 34817318  T
Q  277 acttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 335  Q
    |  |||||   || |||||   ||  |||||||||||||||| ||||||||| ||||||    
T  34817319 agatgttccctgttaaaaaaacgaggttcgggctacttgatctgattgctctgaaactt 34817377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 286 - 327
Target Start/End: Original strand, 27670723 - 27670764
Alignment:
Q  286 tagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    |||||||||||||| ||||||| |||||||||||||||||||    
T  27670723 tagtcaaaaatcgggttttcggactacttgatcggattgctc 27670764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 262 - 327
Target Start/End: Complemental strand, 38065528 - 38065463
Alignment:
Q  262 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    |||||||| ||| |||| |||||||||| ||||||  ||||||| ||||| |||||||||||||||    
T  38065528 ttttgggttattgttacctgttcttagtaaaaaattagattttcaggctatttgatcggattgctc 38065463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 258
Target Start/End: Complemental strand, 9847229 - 9847167
Alignment:
Q  196 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 258  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||||||||| ||||| | ||||||    
T  9847229 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcataactttcatcctt 9847167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 177 - 273
Target Start/End: Complemental strand, 33440545 - 33440450
Alignment:
Q  177 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcatt 273  Q
    ||||||| ||||||| || ||||| ||||| ||||| | |  ||||||| ||| |||||||||||| ||||| || |||||| | ||||||||||||    
T  33440545 tgtatcaacacaaattctgaacatgtttgttacatgaaaattcattttaaggataatattaatctttctaac-ctcatccttctgttttgggtcatt 33440450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 186; Significance: 1e-100; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 6 - 327
Target Start/End: Original strand, 15799136 - 15799455
Alignment:
Q  6 ttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccga 105  Q
    ||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15799136 ttttcctttgttatagggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccgga 15799235  T
Q  106 ttacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatattt 204  Q
    ||||||||||||||||||||| ||||||||||||| || ||        | ||| |||||||||||||||| ||||||||||||||| |||||||| |||    
T  15799236 ttacataatccgaaaaccccctaaacaccctttttcaacgtaaaac---atttcagattatataatccgaactgtatcagcacaaattctaaacatgttt 15799332  T
Q  205 gtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatttt 304  Q
    |||||||| |||| ||||||| ||||||||||| ||||||||| ||  |||||| | |||||||||||| |||| |||||||||||||||||||| |||     
T  15799333 gtaacatggatagtcattttatggacaatattattcttcctaattcgcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgggtttc 15799432  T
Q  305 cgggctacttgatcggattgctc 327  Q
    |||||||||||| ||||||||||    
T  15799433 cgggctacttgaccggattgctc 15799455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 4 - 339
Target Start/End: Complemental strand, 4064932 - 4064598
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||| |||| |||||||||||     
T  4064932 tgttttcctttgttatagggtgaaaaatggagttacgggtttttccggattatgtaatccggaaactttaaaaaatagggcgtgttagatgatgtttccg 4064833  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    |||||||||||||| |||||||| ||||||||||||| |||||        |||||| ||||||||||||||| | ||||||||||||| |||||||| |    
T  4064832 gattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agttcgaattatataatccgaactttatcagcacaaattctaaacatgt 4064736  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttta-ttttgggtcattcttacttgttcttagtcaaaaatcggat 301  Q
    |||||||||| |||| ||||||||||||||| ||||||||||||||| | |||||| || |||||||||||| |||| ||||||||||||||||||| ||    
T  4064735 ttgtaacatggatagtcattttagggacaatgttaatcttcctaactatcatccttctatttttgggtcattgttacctgttcttagtcaaaaatcgaat 4064636  T
Q  302 tttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    |||||||||||||||| |||||||||  ||||||||||    
T  4064635 tttcgggctacttgattggattgctccgaaacttcccc 4064598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 4 - 327
Target Start/End: Original strand, 6156640 - 6156961
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6156640 tgttttcctttgttatatggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccg 6156739  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    |||||||||||||| |||||||| ||||||||| ||| |||||         |||||||||||||||| |||| |||||||||| |||| |||||||| |    
T  6156740 gattacataatccggaaaccccctaaacaccctctttcaaggtaaaacc---gttcggattatataatacgaattgtatcagcataaattctaaacatgt 6156836  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 302  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| | |||| ||||||| |||| |||||||||| ||||| ||| ||    
T  6156837 ttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttttggtcattgttacatgttcttagttaaaaaccgggtt 6156936  T
Q  303 ttcgggctacttgatcggattgctc 327  Q
    || ||||||||||||||||||||||    
T  6156937 tttgggctacttgatcggattgctc 6156961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 33 - 339
Target Start/End: Original strand, 20891551 - 20891855
Alignment:
Q  33 gagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaaca 131  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||||||||||||||||||||| |||||    
T  20891551 gagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcatgttacatgatgtttccgaattacataatccgaaaaccccctaaaca 20891650  T
Q  132 cccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggaca 231  Q
    |||||||| |||||        |||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||| |    
T  20891651 ccctttttcaaggtaaaac---agttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggata 20891747  T
Q  232 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaa 331  Q
    |||||||||||||||||||| |||||| | |||||||| ||| |||| | |||||||||||||||||| ||||| |||||||||||||||||||||  ||    
T  20891748 atattaatcttcctaactctcatccttctgttttgggttattgttacctattcttagtcaaaaatcgggttttcaggctacttgatcggattgctccgaa 20891847  T
Q  332 acttcccc 339  Q
    ||||||||    
T  20891848 acttcccc 20891855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 19 - 339
Target Start/End: Complemental strand, 12465303 - 12464998
Alignment:
Q  19 tagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccga 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||   ||||||     
T  12465303 tagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgtgttacatgatgtttccggatta---aatccgg 12465207  T
Q  119 aaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 218  Q
    ||||||| ||||||| |||||| ||||       |||||| || ||||||||||||         ||||||||||||||||||||||||| ||||||||     
T  12465206 aaacccctaaacaccatttttttaggtaaaa---tagttctgagtatataatccga---------gcacaaatcctaaacatatttgtaatatgtatagt 12465119  T
Q  219 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 318  Q
     |||||||||||||||||||||||| |||||||||||||||| |||||| ||||| ||||||||||||||||||||||||| ||||| | ||||||||||    
T  12465118 tattttagggacaatattaatcttcataactcttatccttttgttttggatcattgttacttgttcttagtcaaaaatcgggttttcagactacttgatc 12465019  T
Q  319 ggattgctctaaaacttcccc 339  Q
    |||||||||| ||||| ||||    
T  12465018 ggattgctctgaaactacccc 12464998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 4 - 339
Target Start/End: Original strand, 33487519 - 33487853
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| ||||  |||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| |     
T  33487519 tgttttcctttgttacagggtgaaaaatggagttacgggtttttccgaattttgtaatccgaaaacttcaaaaaatagggcgcgttatatgatgttttcg 33487618  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    | |||||||||||| |||| ||| |||||||| |||| |||||        |||||||||||||||||||||| ||||||||||||||| ||||| || |    
T  33487619 ggttacataatccggaaactccctaaacaccccttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaaaatgt 33487715  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggat 301  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||    |||||||||||| |||| |||||||||||||||||||  |    
T  33487716 ttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttcagtttttgggtcattgttacatgttcttagtcaaaaatcgagt 33487815  T
Q  302 tttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||||||||||||||||||  ||||||  ||||||||||    
T  33487816 tttcgggctacttgatcgatttgctccgaaacttcccc 33487853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 33 - 327
Target Start/End: Original strand, 38871609 - 38871901
Alignment:
Q  33 gagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaaca 131  Q
    |||| ||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||| | |||||    
T  38871609 gagtaacggatttttccggattttgtaatccgaaaacttcataaaatagggggcgttacatgatgtttccggattacataatccgaaaaccctctaaaca 38871708  T
Q  132 cccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggaca 231  Q
     | ||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| |||||||||||||    
T  38871709 tcttttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggaca 38871805  T
Q  232 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    ||| |||||||||||||||| |||||| | |||||||||||| |||| |||||||||||||||||||| ||||| | |||||| ||||||||||||    
T  38871806 ataataatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcagactacttaatcggattgctc 38871901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 39524682 - 39525006
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||  |||||||||||  |||  | |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  39524682 tgatgttttcttttgttaaagggtgaaaaaatgagcaatggatttttccggattttgtaatccggaaacttaaaaaaatagggcgtgttacatgatgttt 39524781  T
Q  101 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
     | ||||||||||| || |||||||| ||||||||||||| |||||        |||||||||||||||||||||| ||||||| ||||||| |||||||    
T  39524782 tcggattacataattcggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcatcacaaattctaaaca 39524878  T
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 299  Q
    ||||||||| |||||||| ||||||||| ||||||||||||||||||||||| |||||| | |||||||||||| |||||||||||||||| ||||| ||    
T  39524879 tatttgtaatatgtatagtcattttaggaacaatattaatcttcctaactctcatccttctgttttgggtcattgttacttgttcttagtccaaaattgg 39524978  T
Q  300 attttcgggctacttgatcggattgctc 327  Q
     ||||||  |||||||||| ||||||||    
T  39524979 gttttcgaactacttgatcagattgctc 39525006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 4 - 253
Target Start/End: Complemental strand, 26190510 - 26190263
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| | || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |     
T  26190510 tgttttcctttcttatcgggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggtgcgttacatgatgttttcg 26190411  T
Q  104 gattacataa-tccgaaaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    |||||||||| || |||| |||| |||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26190410 gattacataattcagaaaccccctaaacacccttttttaaggt---aaaatagttcggattatataatccgaactgtatcagcacaaatcctaaacatat 26190314  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    ||||||||||||||||||||||| ||| ||| ||||| |||||||||||||    
T  26190313 ttgtaacatgtatagccattttaaggataattttaatattcctaactctta 26190263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 38692998 - 38692662
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggattttt-ccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtt 99  Q
    |||||||||| | ||||  |||||||||||  |||| |||| ||||| ||| |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  38692998 tgatgttttcttttgttaaagggtgaaaaaatgagtaacgggttttttccgaattttgtaatccggaaacttaaaaaaatagggcgcgttacgtgatgtt 38692899  T
Q  100 tcccgattacataatccgaaaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
    ||| |||||||||||||| ||||||| ||||||||||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||    
T  38692898 tccggattacataatccggaaacccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaaca 38692802  T
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 299  Q
    | ||||||||||| |||  ||||||| ||||||||||||| ||| ||||||| ||| || | |||||||||||| ||||   ||||||||||||||||||    
T  38692801 tgtttgtaacatggataatcattttaaggacaatattaatattcataactctcatctttctgttttgggtcattgttacccattcttagtcaaaaatcgg 38692702  T
Q  300 attttcgggctacttgatcggattgctctaaaacttcccc 339  Q
     ||||||| ||||||| |||||||||||  ||||||||||    
T  38692701 gttttcggactacttggtcggattgctccgaaacttcccc 38692662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 39 - 327
Target Start/End: Complemental strand, 32842149 - 32841861
Alignment:
Q  39 cggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttt 137  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || || || ||||  |||||||||||||||| |||||  |||||||||||    
T  32842149 cggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgctagataatttttcaagattacataatccgaacaccccataaacacccttt 32842050  T
Q  138 tttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatatt 236  Q
    || ||||         ||||||||||||||||| |||| |||||||||||||||  ||||||| ||||||||||| |||| ||||||||||| |||||||    
T  32842049 ttcaagggaaaaac--agttcggattatataattcgaattgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagggaacaatatt 32841952  T
Q  237 aatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    ||||||||||||||| |||||| ||||||| |||||| |||| ||||| |||||||||||||| |||||||||||||||||||||||||||    
T  32841951 aatcttcctaactctcatccttctattttgagtcattgttacatgttcgtagtcaaaaatcgggttttcgggctacttgatcggattgctc 32841861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 20 - 339
Target Start/End: Original strand, 15957675 - 15957991
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 119  Q
    ||||||||||||| ||| | |||||||||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||| ||||| |||||||| |    
T  15957675 agggtgaaaaatg-agtaatggatttttccggattttgtaattcggaaacttcgaaaaatagggcgtattacatgatgtttccggattaaataatccgga 15957773  T
Q  120 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 218  Q
    ||||||| |||||||| |||| |||||        |||| ||||||||||||| ||| |||||||| |||||| |||||||| ||||||||||  ||||     
T  15957774 aaccccctaaacacccattttcaaggtaaaac---agtttggattatataatctgaactgtatcagtacaaattctaaacatgtttgtaacatagatagt 15957870  T
Q  219 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 318  Q
     ||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||| |||||||||||||||||| | ||||||| ||||||||||    
T  15957871 aattttagggacaatattaatcttcctaactctggttcttttgttttgggtcattattacctgttcttagtcaaaaatcaggttttcggactacttgatc 15957970  T
Q  319 ggattgctctaaaacttcccc 339  Q
    |||||||||  ||||||||||    
T  15957971 ggattgctccgaaacttcccc 15957991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 28083593 - 28083269
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||  ||||||| |||  |||| |||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||    
T  28083593 tgatgttttcttttgttaaagggtgagaaaatgagtaacgggtttttccggattttgtaatccggaaaattcaaaaaatagggcgcattacatgatattt 28083494  T
Q  101 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
    || |||||||||||||| |||||| | ||||||||||||| || ||        ||| |||||||||||||||||| |||||||||||||||  ||||||    
T  28083493 ccggattacataatccggaaaccctctaaacaccctttttcaacgtaaaac---agtccggattatataatccgaactgtatcagcacaaattataaaca 28083397  T
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 299  Q
    ||||||||||||| |||| |||||||||||||||||||||||| |||||| | |||||| | |||| ||||||| |||| |||||||||  ||||||||     
T  28083396 tatttgtaacatggatagtcattttagggacaatattaatctttctaactttcatccttctgtttttggtcattgttacctgttcttaggaaaaaatcga 28083297  T
Q  300 attttcgggctacttgatcggattgctc 327  Q
     ||||||| |||||||||||||||||||    
T  28083296 gttttcggactacttgatcggattgctc 28083269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 51 - 339
Target Start/End: Complemental strand, 31221504 - 31221218
Alignment:
Q  51 gattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnn 149  Q
    |||| ||||||||| ||||||||||||||| ||||||||||||||||||||  |||||||||||||| |||||| | ||||||||||||| |||||        
T  31221504 gattctgtaatccgaaaacttcaaaaaatatggcgcgttacatgatgtttctggattacataatccggaaaccctctaaacaccctttttcaaggtaaaa 31221405  T
Q  150 nnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 249  Q
        ||||||||||||||||||| || |||||||||||||||  ||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||    
T  31221404 c---agttcggattatataatccaaactgtatcagcacaaattataaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaact 31221308  T
Q  250 cttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    || ||| || | |||||||||||| |||| |||||||||| |||||  || |||||||||||||||||||||||||||  ||||||||||    
T  31221307 ctcatctttctgttttgggtcattgttacatgttcttagttaaaaactgggttttcgggctacttgatcggattgctccgaaacttcccc 31221218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 40620205 - 40619865
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||| |||||||||||  |||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  40620205 tgatgttttcttttgttgaagggtgaaaaaatgagtaacagatttttccggattttgtaatccggaaacttcaaaaaatagggcacgttatatgatgttt 40620106  T
Q  101 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
     | |||||||||||||| |||||||| ||||| | ||||| |||||       || ||| |||||||||||||||| |||||||| |||||| |||||||    
T  40620105 tcggattacataatccggaaaccccctaaacatcatttttcaaggt---aaaatatttcagattatataatccgaattgtatcagtacaaattctaaaca 40620009  T
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttat-ccttttattttgggtcattcttacttgttc----ttagtcaaaa 294  Q
    |  |||||||||| | |  ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| |||| |||||    ||||||||||    
T  40620008 tgcttgtaacatggacaatcattttagggacaatattaatcttcctaactctcatcccttctgttttgggtcattgttacctgttcttaattagtcaaaa 40619909  T
Q  295 atcggattttcgggctacttgatcggattgctctaaaacttccc 338  Q
    ||||| ||| ||| ||||||| |||||||| ||  |||||||||    
T  40619908 atcgggtttccggactacttggtcggattgttccgaaacttccc 40619865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 21 - 327
Target Start/End: Complemental strand, 37183977 - 37183672
Alignment:
Q  21 gggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaa 120  Q
    ||||||||||  |||| || ||||||||  ||||||||||||  |||||||||||||||||||| ||||||||||| ||| | |||||||||||||| ||    
T  37183977 gggtgaaaaaatgagtaacagatttttctagattttgtaatcttgaaacttcaaaaaatagggcacgttacatgatattttcagattacataatccggaa 37183878  T
Q  121 accccc-aaacaccctttttt-aaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 218  Q
    |||| | |||||||||||||| ||||         |||  ||||||||||||| ||| ||||||| ||||||| ||||| || ||||||||||| ||||     
T  37183877 accctctaaacacccttttttcaaggcaaaac---agtctggattatataatctgaactgtatcaacacaaattctaaatatgtttgtaacatggatagt 37183781  T
Q  219 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 318  Q
    ||||||| ||||||||||||||||||||||||| ||| |||| |||||||||||| ||||||||||||||||||||||||| ||||| | ||||||||||    
T  37183780 cattttatggacaatattaatcttcctaactctcatctttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcagactacttgatc 37183681  T
Q  319 ggattgctc 327  Q
    |||||||||    
T  37183680 ggattgctc 37183672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 20 - 339
Target Start/End: Original strand, 38372234 - 38372543
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 119  Q
    |||||||||||  |||| ||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||| || |    
T  38372234 agggtgaaaaaatgagtaacggatttttctggattttgtaatccggaaacttaaaaaaatagggcgggttacatgatgtttccggattacataattcgga 38372333  T
Q  120 aacccc-caaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 218  Q
    ||||||  ||| ||||||||| |||||        ||||| |||||||||||||||| ||||| ||||||||| |||||||| ||||| ||||| ||||     
T  38372334 aaccccttaaataccctttttcaaggtaaaac---agttcagattatataatccgaactgtattagcacaaattctaaacatgtttgttacatggatagt 38372430  T
Q  219 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 318  Q
    ||||||||||||||||||||||||||||||||| ||  ||         |||||| |||| |||||||||| |||||| || ||||||||||||||||||    
T  38372431 cattttagggacaatattaatcttcctaactctcataatt--------cgtcattgttacatgttcttagttaaaaattgggttttcgggctacttgatc 38372522  T
Q  319 ggattgctctaaaacttcccc 339  Q
    |||| ||||  ||||||||||    
T  38372523 ggatcgctccgaaacttcccc 38372543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 66 - 338
Target Start/End: Original strand, 29862583 - 29862854
Alignment:
Q  66 aaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggatta 164  Q
    |||||||||||||||||||||||||  |||||||||| |||||||||||||| |||||||| ||||||| ||||| |||||        |||||| ||||    
T  29862583 aaacttcaaaaaatagggcgcgttaggtgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaac---agttcgaatta 29862679  T
Q  165 tataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttatt 263  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||| | ||||||    ||    
T  29862680 tataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactttcatccttccgttt 29862779  T
Q  264 ttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 338  Q
    |||||||||| |||| ||||||||||||||||||   |||||||||||||||||  ||||||||  |||||||||    
T  29862780 ttgggtcattattacctgttcttagtcaaaaatcaagttttcgggctacttgatgtgattgctccgaaacttccc 29862854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 41 - 338
Target Start/End: Complemental strand, 24203855 - 24203564
Alignment:
Q  41 gatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttt 139  Q
    ||||||| ||||||||||||||     ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  24203855 gattttttcggattttgtaatcg----acttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacacccttttt 24203760  T
Q  140 taaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaat 239  Q
    || |||        ||||||| |||||||||||||| |||||||||| |||| |||||||| ||||||||  | |||  ||||||| |||||||||||||    
T  24203759 tagggtaaaac---agttcgggttatataatccgaactgtatcagcataaattctaaacatgtttgtaactgggataatcattttaaggacaatattaat 24203663  T
Q  240 cttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 338  Q
     ||||||||||| | |||| | |||||| ||||| |||| |||||||||| |||||| |  ||||||||||| |||||||||||||||  |||||||||    
T  24203662 gttcctaactctcaaccttctgttttggatcattgttacctgttcttagttaaaaattgagttttcgggctatttgatcggattgctccgaaacttccc 24203564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 154 - 339
Target Start/End: Original strand, 7884250 - 7884435
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    |||||| ||||||||||| ||| ||||||| ||||||| ||||| || ||||||| |||||| | ||||||||||||||||||||||||||||||||| |    
T  7884250 agttcgaattatataatctgaactgtatcaacacaaattctaaatatgtttgtaatatgtattgtcattttagggacaatattaatcttcctaactctca 7884349  T
Q  254 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||||| | |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||    
T  7884350 tccttctgttttgggtcattgttacatgttcttagtcaagaatcggattttcgggctacttgatcggattgctccgaaacttcccc 7884435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 23 - 240
Target Start/End: Original strand, 25746954 - 25747168
Alignment:
Q  23 gtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc-gaaaa 121  Q
    ||||||||  |||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||| ||||     
T  25746954 gtgaaaaaatgagtaacggatttttccggattttctaatccggaaacttc-aaaaatagggcgcgttacatgatgttttcggattacataatccggaaat 25747052  T
Q  122 cccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccat 221  Q
    |||| ||||||| |||||||||||        |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| |||    
T  25747053 cccctaaacaccattttttaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcat 25747149  T
Q  222 tttagggacaatattaatc 240  Q
    ||||||||||| |||||||    
T  25747150 tttagggacaacattaatc 25747168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 31929320 - 31929004
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||  ||||||||||||| ||| |||||||||||||||||||||||||| |||| |||||||||||||||||                  
T  31929320 tgatgttttcttttgttaaagggtgaaaaatg-agtaacggatttttccggattttgtaatccagaaatttcaaaaaatagggcgc-------------- 31929236  T
Q  101 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
        ||||||||||||| |||||||| |||||||| |||| |||||        |||||||||||||||||| ||| |||||||||||||||  ||||||    
T  31929235 ----attacataatccggaaaccccctaaacaccccttttcaaggtaaaac---agttcggattatataatctgaactgtatcagcacaaattttaaaca 31929143  T
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 299  Q
    | ||||||||||| |||| ||||||||| ||||||||||||||||||||||| |||||| | ||||| |||||| |||| |||||||||| ||||| | |    
T  31929142 tgtttgtaacatggatagtcattttagg-acaatattaatcttcctaactctcatccttctgttttgagtcattgttacctgttcttagttaaaaaccag 31929044  T
Q  300 attttcgggctacttgatcggattgctctaaaacttcccc 339  Q
     |||||||||||||||||||||||||||  ||||||||||    
T  31929043 gttttcgggctacttgatcggattgctccgaaacttcccc 31929004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 27212614 - 27212934
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||||| |||| ||||||||||||  ||||||||| ||||| |||||||||||||||| |||  ||||||||||||| |||||||||||| |||    
T  27212614 tgatgttttcctttgttatagggtgaaaaaatgagttacgggttttttcggattttgtaatccgaaaatctcaaaaaatagggtgcgttacatgattttt 27212713  T
Q  101 cccgattacataatccgaaaac-ccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
     | |||||||||| | ||| || |||  |||||||||||| ||||         ||||||||||||||||| |||| | |||||| ||||||  ||||||    
T  27212714 tcggattacataaccagaacacaccctgaacaccctttttgaagg--gaaaaacagttcggattatataattcgaactatatcagtacaaattataaaca 27212811  T
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 299  Q
    | ||||||||||  |||| |||     | ||||||||||||||||||||||| |||||| |  |||| |||||| |||| ||||||||||||||||||||    
T  27212812 tgtttgtaacatagatagtcat-----gaacaatattaatcttcctaactctcatccttctggtttgagtcattgttacctgttcttagtcaaaaatcgg 27212906  T
Q  300 attttcgggctacttgatcggattgctc 327  Q
     ||||||| ||| ||||| |||||||||    
T  27212907 gttttcggactatttgattggattgctc 27212934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 26319027 - 26319163
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||     
T  26319027 tgttttcctttgttatagggtgaaaaatggagttacggatttttccggattttgttatccggaaacttc-caaaatagggtgcgttacatgatgtttccg 26319125  T
Q  104 gattacataatccgaaaaccccc-aaacaccctttttt 140  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  26319126 gattacataatccgaaaaccccctaaacaccctttttt 26319163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 174 - 339
Target Start/End: Original strand, 14111944 - 14112107
Alignment:
Q  174 aagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcatt 273  Q
    ||||||||||||||||||  |||| || ||||||||||| |||| ||||||||||||||||||||||||||||||| | ||||  ||||||||||| |||    
T  14111944 aagtgtatcagcacaaattttaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactttcatcc--ttattttgggttatt 14112041  T
Q  274 cttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
     ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||  ||||||||||    
T  14112042 gttacttgttcttagtcaaaaatcgggttttcggactacttgataggattgctccgaaacttcccc 14112107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 37095123 - 37094991
Alignment:
Q  7 tttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgat 106  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||| |||    
T  37095123 tttcctttgttatagggtgaaaaatggagttacggatttttccggattttgtaatccgaaaactt-aaaaaataaggcgcgttacatgatgtttccggat 37095025  T
Q  107 tacataatccgaaaacccccaaacaccctttttt 140  Q
    |||  |||||||||||||  ||||||||||||||    
T  37095024 taccaaatccgaaaacccttaaacaccctttttt 37094991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 39 - 339
Target Start/End: Original strand, 26095035 - 26095334
Alignment:
Q  39 cggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttt 137  Q
    ||||||||| | |||||||||||||  ||||  |||||||||| |||||||||||  | ||| | |||||||||||||||| |||||  |||||| ||||    
T  26095035 cggattttttctgattttgtaatccaaaaaccacaaaaaatagagcgcgttacatatttttttcggattacataatccgaacaccccataaacactcttt 26095134  T
Q  138 tttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatatta 237  Q
    || || |        ||||||||||||||||||| ||| ||||||| || |||| |||||||| ||||||||||| |||| ||| ||| |||||||||||    
T  26095135 ttcaaag--gaaaaatagttcggattatataatctgaattgtatcaacataaattctaaacatgtttgtaacatggatagtcatattatggacaatatta 26095232  T
Q  238 atcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 337  Q
    |||||| ||||||| || ||| ||||||| |||||| ||   |||| | ||| ||||||||| |||| |||||||||| || ||||||||  ||||||||    
T  26095233 atcttcttaactctcattcttctattttgtgtcattgttggctgttttcagtaaaaaatcgggtttttgggctacttgttcagattgctccgaaacttcc 26095332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 154 - 339
Target Start/End: Original strand, 12847500 - 12847685
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    ||||||| ||| |||||||||| ||||||||||||||| || ||||| ||||||||||  |||  ||||||| |||||||||||||||||| ||||||      
T  12847500 agttcggtttaaataatccgaactgtatcagcacaaattctgaacatgtttgtaacatagataatcattttatggacaatattaatcttcccaactctcg 12847599  T
Q  254 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    |  || | |||||| ||||| |||  |||||||||||||||||||  ||||||||||||||||||  ||| |||| ||||||||||    
T  12847600 tatttctgttttggatcattgttagctgttcttagtcaaaaatcgagttttcgggctacttgatcatattactctgaaacttcccc 12847685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 154 - 327
Target Start/End: Original strand, 13908605 - 13908778
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    |||||||||||||||||||||| ||||||| || ||||  ||||||| ||||||||| | |||| ||||||| ||||||||||||||||| ||||  | |    
T  13908605 agttcggattatataatccgaattgtatcaacataaattttaaacatgtttgtaacacggatagtcattttatggacaatattaatcttcttaaccttca 13908704  T
Q  254 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    ||||| | ||||| |||||| |||  ||||||| |||||||||| | ||||| | |||||||||||||||||||    
T  13908705 tccttctcttttgagtcattgttagctgttctttgtcaaaaatcaggttttcagactacttgatcggattgctc 13908778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 154 - 339
Target Start/End: Original strand, 23269391 - 23269579
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagca---caaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 250  Q
    ||||| |||||||||||||||| | ||||| ||   ||| | || ||||| ||||||||||| | |  ||||||| ||||||||||||||||||||||||    
T  23269391 agttcagattatataatccgaactttatcatcatcacaacttctgaacatgtttgtaacatgaacaatcattttaaggacaatattaatcttcctaactc 23269490  T
Q  251 ttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    | || ||| |||| ||||| ||  |||  |||||||| ||||||||||| ||||||||||||||||||||||||||   ||||||||||    
T  23269491 tcattcttctattctgggttatagttagatgttcttattcaaaaatcgggttttcgggctacttgatcggattgcttcgaaacttcccc 23269579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 157 - 327
Target Start/End: Original strand, 27158144 - 27158314
Alignment:
Q  157 tcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcc 256  Q
    ||||||||||||||| ||| |||||||||||||||  | ||||| |||| |||||| |||| ||||||| |||||||||||| ||||||||  || ||||    
T  27158144 tcggattatataatctgaactgtatcagcacaaattatgaacatgtttgaaacatggatagtcattttaaggacaatattaagcttcctaatcctcatcc 27158243  T
Q  257 ttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    ||   |||||||||||| ||| ||||| ||| | ||||||  | ||||| |||||||||||| ||||||||    
T  27158244 ttcacttttgggtcattattagttgttattaataaaaaattcggttttcaggctacttgatcagattgctc 27158314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 231 - 327
Target Start/End: Complemental strand, 26898790 - 26898694
Alignment:
Q  231 aatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    ||||||||||||||||||||| |||||| | ||||| |||||| |||  |||||||||||||||||||  |||||||||||||||||||||||||||    
T  26898790 aatattaatcttcctaactctcatccttctgttttgagtcattgttatatgttcttagtcaaaaatcgagttttcgggctacttgatcggattgctc 26898694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 14111851 - 14111942
Alignment:
Q  49 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaa-cccccaaacacccttttt 139  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||   |||||||||||| ||||| |||| |||||||||||||    
T  14111851 cggattttgtaatccagaaacttcaaaaaatagggcgcgttacatgatgtttttggattacataatctgaaaatcccctaaacacccttttt 14111942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 34440650 - 34440779
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||||| |||| |||||| |||||||||||||||||||||          |||||||| |||||||||||| |||| |||||||||||||||||    
T  34440650 tgatgttttcctttgttatagggtaaaaaatggagttacggatttt----------gtaatccgaaaacttcaaaaa-taggacgcgttacatgatgttt 34440738  T
Q  101 cccgattacataatccgaaaaccccc-aaacaccctttttt 140  Q
     | |||| |||||||||||||||||| ||||||||||||||    
T  34440739 tcggattgcataatccgaaaaccccctaaacaccctttttt 34440779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 36359781 - 36359661
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 119  Q
    ||||||||||||| ||||||||| |||| ||||||||||||||| ||||  |||||||||||| ||||| ||||||| ||| | |||||||||||| |||    
T  36359781 agggtgaaaaatg-agttacggaatttttcggattttgtaatccagaaatctcaaaaaataggacgcgtaacatgattttttcggattacataatctgaa 36359683  T
Q  120 aaccccc-aaacaccctttttt 140  Q
    ||||||| ||||||| ||||||    
T  36359682 aaccccctaaacaccttttttt 36359661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 41 - 144
Target Start/End: Original strand, 8032217 - 8032321
Alignment:
Q  41 gatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacc-cccaaacacccttttt 139  Q
    ||||||| |||||||||||||| ||||| ||||||||||||||| | ||||||||| ||||| |||||||||||||||| ||| || |||||||||||||    
T  8032217 gattttttcggattttgtaatctggaaatttcaaaaaatagggcacattacatgatttttccggattacataatccgaacacctcctaaacacccttttt 8032316  T
Q  140 taagg 144  Q
     ||||    
T  8032317 caagg 8032321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 154 - 337
Target Start/End: Complemental strand, 40613739 - 40613556
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    |||||||||||||||||||||| ||||| |||| ||||  | ||||| ||||||||||| |||   |||||| ||||| ||||||||||||||||| | |    
T  40613739 agttcggattatataatccgaactgtatgagcaaaaattatgaacatgtttgtaacatggataattattttaaggacattattaatcttcctaactttca 40613640  T
Q  254 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 337  Q
    ||||| | | || |||||||  ||  |||||||||| |||||||   |||| | ||||||||||| ||||||||  ||||||||    
T  40613639 tccttatgtattaggtcattgctaactgttcttagttaaaaatccagtttttgagctacttgatcagattgctccgaaacttcc 40613556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 154 - 323
Target Start/End: Complemental strand, 41639557 - 41639385
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    |||| ||||||||||||||||| ||||||||||||||| || |   | ||||||||||  ||| ||| ||||  |||||||||||| | ||||||||| |    
T  41639557 agtttggattatataatccgaactgtatcagcacaaattctgagtctgtttgtaacatagataaccagtttaatgacaatattaatttccctaactctca 41639458  T
Q  254 tccttttattttgggtcattcttacttgttcttagt---caaaaatcggattttcgggctacttgatcggatt 323  Q
    || |||| |||| ||||||| ||| |||||||||||    ||||||| ||||||| |||||||||||| ||||    
T  41639457 tctttttgttttaggtcattgttagttgttcttagtaaaaaaaaatctgattttcaggctacttgatcagatt 41639385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 160 - 265
Target Start/End: Original strand, 21070429 - 21070534
Alignment:
Q  160 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 259  Q
    ||||||||||||| || || ||||| |||||| || ||||||||||||||||  |||| ||||||| ||||||||||||||||| |||| || |||| ||    
T  21070429 gattatataatccaaactgaatcagtacaaattctgaacatatttgtaacatagatagtcattttaaggacaatattaatcttcataaccctcatccatt 21070528  T
Q  260 tatttt 265  Q
    ||||||    
T  21070529 tatttt 21070534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 153 - 265
Target Start/End: Complemental strand, 8739050 - 8738938
Alignment:
Q  153 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 252  Q
    |||||||||||| ||||||| || || |||| ||| ||| || ||||| ||||||||||| |||| ||||||| | |||||||||||||||||||||||     
T  8739050 tagttcggattacataatccaaactgcatcaacaccaattctgaacatgtttgtaacatggatagtcattttaagaacaatattaatcttcctaactctc 8738951  T
Q  253 atccttttatttt 265  Q
    |||| | ||||||    
T  8738950 atccctgtatttt 8738938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 49 - 140
Target Start/End: Original strand, 38640676 - 38640767
Alignment:
Q  49 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccccaaacaccctttttt 140  Q
    |||||||| ||||| |||||  |||||||||||||||||||| ||||| | | | |||||||||||||||| ||||| ||||||||||||||    
T  38640676 cggattttataatctggaaatctcaaaaaatagggcgcgttaaatgatttattcggattacataatccgaacacccctaaacaccctttttt 38640767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 161 - 327
Target Start/End: Complemental strand, 6800984 - 6800818
Alignment:
Q  161 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 260  Q
    ||||||||||  ||| |||||||||| ||||  | ||||| |||| |||||| | || ||||||| |||||||  |||||||||| | ||| |||||| |    
T  6800984 attatataatttgaactgtatcagcataaattatgaacatgtttgcaacatggacagtcattttaaggacaatgctaatcttcctcattctcatccttct 6800885  T
Q  261 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
     |||| ||||||| |||  |||||||||||||||||| | ||||||  ||||||||||  |||||||    
T  6800884 gttttaggtcattgttagatgttcttagtcaaaaatccggttttcgaactacttgatcatattgctc 6800818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 26190267 - 26190201
Alignment:
Q  273 tcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    |||||| |||||||||||||||||||| ||||||| ||||| |||||||||||||| ||||||||||    
T  26190267 tcttacctgttcttagtcaaaaatcgggttttcggactactagatcggattgctctgaaacttcccc 26190201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 154 - 248
Target Start/End: Complemental strand, 27494217 - 27494123
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaac 248  Q
    |||||||||||  | |||| || || | |||||| ||| |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  27494217 agttcggattacgtgatccaaactgcaccagcaccaattctaaacatatttgtaacatggatagtcattttaaggacaatattaatcttcctaac 27494123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 33901094 - 33901200
Alignment:
Q  232 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaa 331  Q
    ||||||||||||||||||| ||||||| | |||| ||||||| ||| ||||| ||||||||||||  ||||||| | ||| |||||| ||||||||  ||    
T  33901094 atattaatcttcctaactcatatccttctcttttaggtcattgttagttgtttttagtcaaaaatttgattttcagactatttgatcagattgctccgaa 33901193  T
Q  332 acttccc 338  Q
    |||||||    
T  33901194 acttccc 33901200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 258
Target Start/End: Original strand, 16429339 - 16429443
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    |||||||||||  |||||| || |  |||||||| ||| || ||||| ||||||||||| |||| | ||||| |||||||||||||||||| ||||||||    
T  16429339 agttcggattacctaatccaaactacatcagcaccaattctgaacatgtttgtaacatgaatagtcgttttaaggacaatattaatcttccaaactctta 16429438  T
Q  254 tcctt 258  Q
    |||||    
T  16429439 tcctt 16429443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 269
Target Start/End: Original strand, 26093502 - 26093618
Alignment:
Q  153 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 252  Q
    |||||| ||||||||||||| || | |||||||| ||||  | ||||| ||| ||||||| |||| ||||||| |||||| |||||||||| |||||||     
T  26093502 tagttcagattatataatcctaactatatcagcataaattatgaacatgtttctaacatggatagtcattttatggacaaaattaatcttcttaactctc 26093601  T
Q  253 atccttttattttgggt 269  Q
    |||||| | ||||||||    
T  26093602 atccttctgttttgggt 26093618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 337
Target Start/End: Original strand, 26622170 - 26622350
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    ||||||||||||||||| |||| |||||||||||||||    ||  | ||||||||||   || |||  ||| |||| ||||||| |||||||||| | |    
T  26622170 agttcggattatataattcgaactgtatcagcacaaatttcgaatttgtttgtaacatag-taaccagattaaggaccatattaaacttcctaactttca 26622268  T
Q  254 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 337  Q
    ||||| |||||| ||| ||| ||| |||||  |||||||||||| | ||||||| |||||||||| ||||||||  ||||||||    
T  26622269 tccttctattttaggttattgttagttgtt--tagtcaaaaatccggttttcggactacttgatcagattgctccgaaacttcc 26622350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 156 - 258
Target Start/End: Complemental strand, 8739250 - 8739148
Alignment:
Q  156 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 255  Q
    |||||||||  |||||| || || | |||||| ||| || ||||| |||||||||||  ||| ||||||| ||||||||||||||||||||||||| |||    
T  8739250 ttcggattacgtaatccaaactgcaccagcaccaattctgaacatgtttgtaacatgggtagtcattttaaggacaatattaatcttcctaactctcatc 8739151  T
Q  256 ctt 258  Q
    |||    
T  8739150 ctt 8739148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 1350374 - 1350290
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaa 238  Q
    ||||||||||||||||| | || | ||||| ||||||| |||||||| ||||||||||| ||| |||||||| ||| ||||||||    
T  1350374 agttcggattatataattcaaactatatcaacacaaattctaaacatgtttgtaacatggataaccattttatggataatattaa 1350290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 327
Target Start/End: Original strand, 41253359 - 41253530
Alignment:
Q  156 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 255  Q
    ||||||||||||||| |||| |||| |||||| |||  | ||| | ||||||||||| ||| | | |||| | || |||||||||||||||||| | |||    
T  41253359 ttcggattatataattcgaactgtaccagcaccaattatgaacttgtttgtaacatgaataacgaatttaagtaccatattaatcttcctaactatcatc 41253458  T
Q  256 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    ||  | |||| ||||||| ||| |||||| || | |||||||  | || ||||| |||||||| ||||||||    
T  41253459 ctcctgttttaggtcattgttagttgttcctaataaaaaatccaaattccgggccacttgatcagattgctc 41253530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 196 - 258
Target Start/End: Complemental strand, 28445231 - 28445169
Alignment:
Q  196 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 258  Q
    ||||| |||||||||||||| | | ||||| ||||||||||||||||||||||||| ||||||    
T  28445231 aacatgtttgtaacatgtatggtcgttttaaggacaatattaatcttcctaactctcatcctt 28445169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 236 - 317
Target Start/End: Original strand, 7036677 - 7036758
Alignment:
Q  236 taatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 317  Q
    ||||||||||||||||||||||| ||| || ||||||| ||  ||||||  ||| ||||||| ||||||||||||| |||||    
T  7036677 taatcttcctaactcttatccttctatattaggtcattgttggttgttcacagttaaaaatctgattttcgggctatttgat 7036758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 34529936 - 34530029
Alignment:
Q  6 ttttcctgtgttgtagggtgaaaaatggagttacggatttttc---cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgat 96  Q
    ||||||| |||| |||| |||||||  ||||| |||||||||    |||||||||||||||  |||| ||||||||||||||| ||||||||||    
T  34529936 ttttcctttgttataggatgaaaaaatgagttgcggatttttttttcggattttgtaatccaaaaacctcaaaaaatagggcgtgttacatgat 34530029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 34530300 - 34530367
Alignment:
Q  182 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 249  Q
    |||||| ||| || ||||| |||||||||||  ||| ||||||| |||||||||||||||||||||||    
T  34530300 cagcactaattctgaacatgtttgtaacatggttagtcattttaaggacaatattaatcttcctaact 34530367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 43388252 - 43388189
Alignment:
Q  33 gagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgat 96  Q
    |||||||||||| ||  |||||||||||||||||||  | |||||||||||||| |||||||||    
T  43388252 gagttacggattcttttggattttgtaatccggaaatctaaaaaaatagggcgcattacatgat 43388189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 258
Target Start/End: Complemental strand, 8973631 - 8973569
Alignment:
Q  196 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 258  Q
    ||||| ||||||||||| |||  ||||||| |||||||||||| |||||||||||| ||||||    
T  8973631 aacatgtttgtaacatggataatcattttaaggacaatattaaccttcctaactctcatcctt 8973569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 11186234 - 11186097
Alignment:
Q  159 ggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 258  Q
    ||||||||||||||||| |||||||||| |||| || |   ||||||||||||| ||| ||  ||||  ||| |||||||| ||| | ||||| ||||||    
T  11186234 ggattatataatccgaactgtatcagcataaattctgagtctatttgtaacatggataaccgatttaatgaccatattaattttcttgactctcatcctt 11186135  T
Q  259 ttattttgggtcattcttacttgttcttagtcaaaaat 296  Q
     | |||| ||| ||| |||  |||||||||| ||||||    
T  11186134 ctgttttaggtaattgttagatgttcttagtaaaaaat 11186097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 16429168 - 16429240
Alignment:
Q  193 ctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatttt 265  Q
    |||||||| ||||||||||| |||| |||||||  || |||| |||||||| ||||||| |||||| ||||||    
T  16429168 ctaaacatgtttgtaacatggatagtcattttaatgataatactaatcttcataactctcatccttgtatttt 16429240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 28445441 - 28445381
Alignment:
Q  182 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatctt 242  Q
    |||||| ||| || ||||| ||||||||||| |||| ||||||| ||||||||||||||||    
T  28445441 cagcacgaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatctt 28445381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 38641033 - 38641083
Alignment:
Q  196 aacatatttgtaacatgtatagccattttagggacaatattaatcttccta 246  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||||||||||||    
T  38641033 aacatgtttgtaacatagatagtcattttaaggacaatattaatcttccta 38641083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 170; Significance: 6e-91; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 17264354 - 17264690
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||  |||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17264354 tgatgttttcttttgttacagggtgaaaaaatgagtaacggatttttccggattttgtaatctggaaacttcaaaaaatagggcgcgttacatgatgttt 17264453  T
Q  101 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
    || |||||||||||||| |||||||| ||||||||||||| |||||       ||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  17264454 ccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa---tagttcggattatataatctgaactgtatcagcacaaattctaaaca 17264550  T
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 299  Q
    | |||| ||||||  ||| |||||||||||||||||| |||||||||||||| |||||| | ||||| |||||| |||| |||||||||| |||||| |     
T  17264551 tgtttgcaacatggttagtcattttagggacaatatttatcttcctaactctcatccttctgttttgcgtcattgttacctgttcttagttaaaaattga 17264650  T
Q  300 attttcgggctacttgatcggattgctctaaaacttcccc 339  Q
     |||| |||||||||||| |||||||||  ||||||||||    
T  17264651 gtttttgggctacttgatgggattgctccgaaacttcccc 17264690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 4 - 339
Target Start/End: Original strand, 23406743 - 23407077
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| ||||||||||||||||||||||  |||||||| |||| ||||||||||||||||||||||||||||||||||  |||||||||      
T  23406743 tgttttcctttgttatagggtgaaaaatggagttacgagtttttccgaatttcgtaatccggaaacttcaaaaaatagggcgcgttagttgatgtttctg 23406842  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    |||||||||||||| |||||||| ||||||| ||||| |||||        |||||| ||||||||||||||| ||||||||||||||| |||||||| |    
T  23406843 gattacataatccggaaaccccctaaacaccatttttcaaggtaaaac---agttcgaattatataatccgaactgtatcagcacaaattctaaacatgt 23406939  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggat 301  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||    |||||||||||| |||||||||||||||||||||||   |    
T  23406940 ttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttccgtttttgggtcattattacttgttcttagtcaaaaatcaagt 23407039  T
Q  302 tttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||||||||||||||||  ||||||||  ||||||||||    
T  23407040 tttcgggctacttgatttgattgctccgaaacttcccc 23407077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 4 - 339
Target Start/End: Complemental strand, 2813438 - 2813103
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggat--tttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttc 101  Q
    ||||||||| | || ||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||| || | |||||||||||||||    
T  2813438 tgttttcctttattatagggtgaaaaatggagttacagatttttccggatattttgtaatccggaaacttcaaaaaataaggtgtgttacatgatgtttc 2813339  T
Q  102 ccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacat 200  Q
    | |||||||||||||| |||||||| ||||||||||||| |||||         |||||||| |||||||||||| ||||||| ||||||| ||||||||    
T  2813338 cggattacataatccggaaaccccctaaacaccctttttcaaggtaaaacg---gttcggat-atataatccgaactgtatcaccacaaattctaaacat 2813243  T
Q  201 atttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcgg 299  Q
    |||| ||||||| |||| ||||||| ||| ||||||||||||||||||||| ||||||    |||||||||||| |||| ||||||||||||||||||||    
T  2813242 atttttaacatgaatagtcattttatggataatattaatcttcctaactctcatccttccgtttttgggtcattgttacctgttcttagtcaaaaatcgg 2813143  T
Q  300 attttcgggctacttgatcggattgctctaaaacttcccc 339  Q
     |||||||||||||||||||||||||||  ||||||||||    
T  2813142 gttttcgggctacttgatcggattgctccgaaacttcccc 2813103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 4 - 339
Target Start/End: Original strand, 5699505 - 5699846
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  5699505 tgttttcctttgttatagggtgaaaaatggagttacgggttttttcgaattttgtaatccggaaacttgaaaaaatagggcgcgttacatgatgtttccg 5699604  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnnt----agttcggattatataatccgaagtgtatcagcacaaatcctaaac 198  Q
    |||||||||||||| |||||||| ||||||||||||| |||||       |    | ||| |||||||||||||||| ||||| | ||||||| |||||     
T  5699605 gattacataatccggaaaccccctaaacaccctttttcaaggtaatacagttcagatttcagattatataatccgaactgtattaacacaaattctaaat 5699704  T
Q  199 atatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatc 297  Q
    || ||||||||||| |||| ||||||| ||||||||||||||||| ||||||| |||||| |  |||||||||||| |||| | ||||||||||||||||    
T  5699705 atgtttgtaacatggatagtcattttaaggacaatattaatcttcataactctcatccttctgtttttgggtcattgttacctattcttagtcaaaaatc 5699804  T
Q  298 ggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||  |||||| |||||||||||||||||||  ||||||||||    
T  5699805 gggatttcggactacttgatcggattgctccgaaacttcccc 5699846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 20 - 337
Target Start/End: Complemental strand, 4508498 - 4508183
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 119  Q
    |||||||||||  |||| ||||||||||||||||||| |||||| |||| |||||||| ||||||| |||||||||||||||| ||||| |||||||| |    
T  4508498 agggtgaaaaaatgagtaacggatttttccggattttataatccagaaatttcaaaaattagggcgtgttacatgatgtttccggattatataatccgga 4508399  T
Q  120 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 218  Q
    || |||| ||||| | ||||| |||||        |||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||||     
T  4508398 aatcccctaaacaacttttttcaaggtaaaac---agttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagt 4508302  T
Q  219 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 318  Q
    ||||||||||||||||||||||||||||||| | |||||| | |||||||||||| |||| |||||||||||||||||||| |||||||||||||||||     
T  4508301 cattttagggacaatattaatcttcctaactttcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgggttttcgggctacttgatt 4508202  T
Q  319 ggattgctctaaaacttcc 337  Q
    |||||||||  ||||||||    
T  4508201 ggattgctccgaaacttcc 4508183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 20 - 326
Target Start/End: Complemental strand, 14587756 - 14587452
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 119  Q
    |||||||||||  |||| | ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||  |    
T  14587756 agggtgaaaaaatgagtaagggatttttccggattttgtaatccgaaaactttaaaaaatagggcgcgttacatgatgtttcctgattacataatccata 14587657  T
Q  120 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 218  Q
    ||||||| ||||||| ||||| |||||        ||||||||||||||||||  || |||||| |||||||| |||||||| ||||||||||| ||||     
T  14587656 aaccccctaaacaccatttttcaaggtaaaac---agttcggattatataatcataactgtatcggcacaaattctaaacatgtttgtaacatggatagt 14587560  T
Q  219 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 318  Q
    ||||||| ||||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||| |||||  ||||||| ||||||||||||     
T  14587559 cattttacggacaatattaatcttcctaactctaatccttatgttttgggtcattgttacatgttcttagtaaaaaaatggatttttgggctacttgatt 14587460  T
Q  319 ggattgct 326  Q
    ||||||||    
T  14587459 ggattgct 14587452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 32035057 - 32035266
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | |||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32035057 tgatgttttcttttgttatatgatgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 32035156  T
Q  101 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
    || |||||||||||||| |||||||| |||||||||||||||||||       |||||||||||||||||||     |||||||||||||||||||||||    
T  32035157 ccggattacataatccggaaaccccctaaacacccttttttaaggt---aaaatagttcggattatataatc-----tgtatcagcacaaatcctaaaca 32035248  T
Q  200 tatttgtaacatgtatag 217  Q
    ||||||||||||||||||    
T  32035249 tatttgtaacatgtatag 32035266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 20 - 327
Target Start/End: Complemental strand, 3717479 - 3717173
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 119  Q
    |||||||||||  |||| | ||  ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||| | |    
T  3717479 agggtgaaaaaatgagtaatgggcttttccgaattttgtaatccggaaacttcaaaaattagggcgcgttacatgatgtttccggattatataatctgga 3717380  T
Q  120 aacc-cccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 218  Q
    |||| || ||||||  ||||| |||||        |||||||||||||||||||||| ||||||| ||||||| |||||||| | ||||||||| ||||     
T  3717379 aacctcctaaacacaatttttcaaggtaaaac---agttcggattatataatccgaactgtatcatcacaaattctaaacatgtctgtaacatggatagt 3717283  T
Q  219 cattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 317  Q
    ||||||||||||||||||||| || |||||||| |||||| |  |||||||||||| |||| |||||||||||||||||||| ||||| | |||||||||    
T  3717282 cattttagggacaatattaatttttctaactctcatccttctgtttttgggtcattgttacatgttcttagtcaaaaatcgggttttcagactacttgat 3717183  T
Q  318 cggattgctc 327  Q
    ||||||||||    
T  3717182 cggattgctc 3717173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 4 - 335
Target Start/End: Original strand, 5638826 - 5639138
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| ||||||||||||| ||||||||||||||||||||||||                 |||||||||||||||||||||||||||||     
T  5638826 tgttttcctctgttatagggtgaaaaatagagttacggatttttccggatttt-----------------aaaaatagggcgcgttacatgatgtttccg 5638908  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    |||||||||||  |||||  ||| ||||||||||||| |||||        |||||||||||||||||||||| |||||||||||| ||| ||||||| |    
T  5638909 gattacataatttgaaaaatccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacatatcataaacatgt 5639005  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 302  Q
     |||||||| |||||||||| |||||||||||||||||||| |||||||||||||||| ||||| |||||| |||| |||||||| ||||||||||| ||    
T  5639006 ctgtaacatatatagccattctagggacaatattaatcttcttaactcttatccttttgttttgagtcattgttacctgttcttaatcaaaaatcgggtt 5639105  T
Q  303 ttcgggctacttgatcggattgctctaaaactt 335  Q
    | ||||||||||| || ||||||||| ||||||    
T  5639106 tccgggctacttggtcagattgctctgaaactt 5639138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 20 - 325
Target Start/End: Complemental strand, 1945725 - 1945423
Alignment:
Q  20 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 119  Q
    |||||||||||  |||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||| |  ||||| ||||| |||||| |||    
T  1945725 agggtgaaaaaatgagttacggatttttccggattttgtaatccgaaaacttcaaaaactagggtgcgttacataaattttccggattatataatctgaa 1945626  T
Q  120 aacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagcc 219  Q
     ||||| |||| || ||||| |||          | ||| |||||||||||||||| |||||| |||||||| |||||||| ||||||||||| |||| |    
T  1945625 cacccctaaaccccatttttcaag---tgaaaacaattcagattatataatccgaactgtatcggcacaaattctaaacatgtttgtaacatggatagtc 1945529  T
Q  220 attttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcg 319  Q
    |||||||||| ||||||||||||||||||||| |||||| | ||||||| |||| |||| |||| ||| |||||||||||||||||||| || |||||||    
T  1945528 attttagggataatattaatcttcctaactctcatccttctgttttgggacattgttacctgtttttattcaaaaatcggattttcgggttatttgatcg 1945429  T
Q  320 gattgc 325  Q
    ||||||    
T  1945428 gattgc 1945423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 4 - 318
Target Start/End: Complemental strand, 24604575 - 24604261
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatg-gagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcc 102  Q
    ||||||||| |||  ||||||||||||   |||||| ||||||||||| ||||||||||||  ||||||||||||||||||||  ||||||||| | | |    
T  24604575 tgttttcctttgtcatagggtgaaaaaaatgagttaaggatttttccgaattttgtaatccaaaaacttcaaaaaatagggcgtcttacatgatttcttc 24604476  T
Q  103 cgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacata 201  Q
     |||||||||||||||| |||||  ||||||| ||||| ||||         |||||  ||||||||||| ||| | ||||||||||||| |||||||||    
T  24604475 ggattacataatccgaacaccccttaaacaccatttttcaagggaaaaac--agttcatattatataatctgaactctatcagcacaaattctaaacata 24604378  T
Q  202 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 301  Q
    |||||||||   |||| |||||||| |||||||||||||||||||||| | |||||| | ||||| |||||| |||| |||||||||||||||||||| |    
T  24604377 tttgtaacaaagatagtcattttagagacaatattaatcttcctaactttcatccttctgttttgagtcattgttacctgttcttagtcaaaaatcgggt 24604278  T
Q  302 tttcgggctacttgatc 318  Q
    ||| |||||||||||||    
T  24604277 ttttgggctacttgatc 24604261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 39 - 336
Target Start/End: Original strand, 9905100 - 9905392
Alignment:
Q  39 cggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttt 137  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||| ||| |||| ||||| |||||||||||||||| |||||| |||| || |      
T  9905100 cggatttttccggattttgtaattcggaaatttcaaaaaatagggcgcgctacgtgatttttccggattacataatccgaacaccccctaaacgccatca 9905199  T
Q  138 tttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatatt 236  Q
    || ||||        ||||| ||||||||||| ||      |||||||||||||  ||||||| ||||||||||| |||  ||||||||||| |||||||    
T  9905200 ttcaagg--gaaaaatagtttggattatataaccca-----tatcagcacaaattttaaacatgtttgtaacatggataatcattttagggaacaatatt 9905292  T
Q  237 aatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 336  Q
    ||| ||||| |||||||||||| | ||||| |||||| ||||   |||||||||||||||||| |||||||||||||||||||||||||||  |||||||    
T  9905293 aattttccttactcttatccttctgttttgagtcattgttaccaattcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttc 9905392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 7412772 - 7412916
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||  |||||||||||  |||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7412772 tgatgttttcttttgttaaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgtgttacatgatgttt 7412871  T
Q  101 cccgattacataatccgaaaacccccaaacacccttttttaaggt 145  Q
    || |||||||||||||||||||||| ||||||||||||| |||||    
T  7412872 ccggattacataatccgaaaacccctaaacaccctttttcaaggt 7412916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 104 - 327
Target Start/End: Original strand, 2539498 - 2539719
Alignment:
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    |||||||||||| | |||||||| ||||||||||||| |||||        |||||||||||||||||||||| | |||| |||||||| || ||||| |    
T  2539498 gattacataatctggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactctatccgcacaaattctgaacatgt 2539594  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 302  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||| | ||| |||| ||||| ||  ||    
T  2539595 ttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctattcgtagttaaaaaccgagtt 2539694  T
Q  303 ttcgggctacttgatcggattgctc 327  Q
    ||||| |||||||||||||||||||    
T  2539695 ttcggactacttgatcggattgctc 2539719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 192 - 339
Target Start/End: Complemental strand, 21515057 - 21514910
Alignment:
Q  192 cctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtca 291  Q
    |||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| |  ||||||||||| |||| ||||||||||||    
T  21515057 cctaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctcctttgggtcattgttacctgttcttagtca 21514958  T
Q  292 aaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    |||||||||||||||| |||||||||||||||||||  ||||||||||    
T  21514957 aaaatcggattttcggactacttgatcggattgctccgaaacttcccc 21514910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 154 - 337
Target Start/End: Original strand, 29519374 - 29519557
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    |||||||||||||||||  ||| ||||||||||||||| |||||||| ||||||||||| || | ||||||| ||| ||||||||||||||||||| | |    
T  29519374 agttcggattatataatatgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggaaaatattaatcttcctaactatca 29519473  T
Q  254 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 337  Q
    ||||| |||||||||||||| |||| ||||||| |||||||||||| |||||| |||||||||||  |||||||  ||||||||    
T  29519474 tccttctattttgggtcattgttacgtgttcttggtcaaaaatcgggttttcgagctacttgatcaaattgctccgaaacttcc 29519557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 4 - 145
Target Start/End: Complemental strand, 33413558 - 33413417
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| |||||||||||||||||||||| ||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  33413558 tgttttcctttgttatagggtgaaaaatggagttacgaatttttctgaattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtttcca 33413460  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggt 145  Q
    |||||||||||| | |||||||| ||||| ||||||| |||||    
T  33413459 gattacataatctggaaaccccctaaacaacctttttcaaggt 33413417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 154 - 327
Target Start/End: Complemental strand, 13801091 - 13800918
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    ||||||||||| |||||| ||| ||||| |||| |||| |||||||| ||||||||||  ||   ||||||| | ||||||||||||||||||||||| |    
T  13801091 agttcggattacataatcggaactgtattagcataaattctaaacatgtttgtaacatagattatcattttatgaacaatattaatcttcctaactctca 13800992  T
Q  254 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
    || || | |||||||||||| ||| |||||||||||||||||||||||||| |  |||||||||||||||||||    
T  13800991 tcattatgttttgggtcattgttagttgttcttagtcaaaaatcggatttttgaactacttgatcggattgctc 13800918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 154 - 323
Target Start/End: Complemental strand, 7734390 - 7734221
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    ||||| ||||||||||| |||| |||||||  |||||| |||||||| ||||||||| | || | ||||||| ||||||||||||||||||||||| | |    
T  7734390 agttcagattatataattcgaactgtatcaatacaaattctaaacatgtttgtaacacgaattgtcattttatggacaatattaatcttcctaactatca 7734291  T
Q  254 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 323  Q
    ||||||| |||||| ||||| |||  |||||||  ||||||||| | |||||||||||||||||| ||||    
T  7734290 tccttttgttttggatcattgttatctgttcttgatcaaaaatcaggttttcgggctacttgatcagatt 7734221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 214 - 315
Target Start/End: Original strand, 32044537 - 32044638
Alignment:
Q  214 atagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctact 313  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||| | |||||||||||||    
T  32044537 atagtcattttagggacaatattaatcttcctaactcttatccttttgttttggatcattgttacctgttcttagtcaaaaatcaggttttcgggctact 32044636  T
Q  314 tg 315  Q
    ||    
T  32044637 tg 32044638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 177 - 337
Target Start/End: Original strand, 34528558 - 34528718
Alignment:
Q  177 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctt 276  Q
    |||||||||||||||  | ||||| ||||||||||| |||  ||||| | ||| |||||||||||| |||||||| || ||| | |||||||||||| ||    
T  34528558 tgtatcagcacaaattatgaacatgtttgtaacatggatattcatttcaaggataatattaatctttctaactctcattcttctgttttgggtcattatt 34528657  T
Q  277 acttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 337  Q
    |  |||||||||||||||||| | ||||||| ||||||||||||||||||| |||||||||    
T  34528658 agctgttcttagtcaaaaatctggttttcggtctacttgatcggattgctccaaaacttcc 34528718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 156 - 339
Target Start/End: Complemental strand, 29289687 - 29289504
Alignment:
Q  156 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 255  Q
    |||||||||||||||| ||| |||||||||||||||  | ||||| ||||||||||  |||   |||||| ||||||||||||| ||||||||||  |||    
T  29289687 ttcggattatataatctgaactgtatcagcacaaattatgaacatctttgtaacatagatattaattttatggacaatattaattttcctaactcgcatc 29289588  T
Q  256 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||| | |||| ||||||| |||  |||||||||||||||||| | |||||| |||||||||||  |||||||  ||||||||||    
T  29289587 cttctgttttaggtcattgttagatgttcttagtcaaaaatcaggttttcgtgctacttgatcaaattgctccgaaacttcccc 29289504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 161 - 336
Target Start/End: Complemental strand, 6704183 - 6704009
Alignment:
Q  161 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 260  Q
    ||||||||||||||| ||| | ||||||||| | |||  ||||||||||||| ||| | | |||| ||||||||||||||||||||||||| ||| ||      
T  6704183 attatataatccgaactgtgttagcacaaattccaaatctatttgtaacatggataactagtttaaggacaatattaatcttcctaactctcatcattcg 6704084  T
Q  261 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 336  Q
    ||||| ||||||| |||  ||||  | |||||||||| | ||||||| ||| |||||| ||||||||| |||||||    
T  6704083 attttaggtcattgttagctgttaat-gtcaaaaatccggttttcggactatttgatcagattgctctgaaacttc 6704009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 154 - 338
Target Start/End: Complemental strand, 14038026 - 14037845
Alignment:
Q  154 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 253  Q
    |||||||||||||||| ||||| ||||||||||||||| || |   | ||||||||||| ||| ||  ||||  ||| |||||||||||| ||||    |    
T  14038026 agttcggattatataacccgaactgtatcagcacaaattctgagtctctttgtaacatggataacctgtttaaagaccatattaatcttcttaacc---a 14037930  T
Q  254 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 338  Q
    ||||| | |||| ||||||| ||| |||||||||||||||||||   |||||| ||||||||||| |||||||| ||||| ||||    
T  14037929 tccttctgttttaggtcattgttagttgttcttagtcaaaaatctagttttcgtgctacttgatcagattgctccaaaacatccc 14037845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 164 - 335
Target Start/End: Original strand, 236899 - 237069
Alignment:
Q  164 atataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatt 263  Q
    ||||||| |||| | |||||||||||||  | ||||| ||||||||||| | |  ||||||| |||| |||||||||||||||||||| ||| || ||||    
T  236899 atataattcgaactatatcagcacaaattatgaacatgtttgtaacatggaaaatcattttaaggaccatattaatcttcctaactctcatcgttctatt 236998  T
Q  264 ttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 335  Q
    || ||||||| ||| ||||| | |||| |||| |  || ||| || || |||||||||||||||| ||||||    
T  236999 ttaggtcattgttagttgttttcagtcgaaaa-ccaatattcaggttatttgatcggattgctctgaaactt 237069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 16450355 - 16450481
Alignment:
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 299  Q
    ||||||||||||| ||| ||| |||| |||  |||||||||||||||| ||| ||| || | |||| ||||||| |||  |||||||||||||||||  |    
T  16450355 tatttgtaacatggataaccagtttaaggaacatattaatcttcctaaatctcatcattatgttttaggtcattgttagctgttcttagtcaaaaatttg 16450454  T
Q  300 attttcgggctacttgatcggattgct 326  Q
     |||| ||||||||||||| |||||||    
T  16450455 gtttttgggctacttgatcagattgct 16450481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 33413408 - 33413365
Alignment:
Q  296 tcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  33413408 tcggattttcgggctacttgatcggattgctctgaaacttcccc 33413365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 202 - 327
Target Start/End: Original strand, 3365808 - 3365933
Alignment:
Q  202 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 301  Q
    ||||||||||| ||| | | |||| |||  |||||||||||||||||| | |||||| | |||| ||||||| ||| ||||||  | ||||||||| | |    
T  3365808 tttgtaacatggataacaagtttaaggaacatattaatcttcctaactttcatccttctgttttaggtcattgttaattgttcacactcaaaaatccggt 3365907  T
Q  302 tttcgggctacttgatcggattgctc 327  Q
    |||| || |||||||||  |||||||    
T  3365908 tttcaggttacttgatcatattgctc 3365933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 222 - 338
Target Start/End: Complemental strand, 10310427 - 10310311
Alignment:
Q  222 tttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcgga 321  Q
    |||| |||| |||||||||||||||||| | || ||| |||||| ||| ||| | | ||||||| |||||||||||  |||||  ||||||||| || ||    
T  10310427 tttaaggaccatattaatcttcctaactatcattcttctattttaggttattgtaagttgttctcagtcaaaaatccaatttttaggctacttggtcaga 10310328  T
Q  322 ttgctctaaaacttccc 338  Q
    ||| ||  |||||||||    
T  10310327 ttgttccgaaacttccc 10310311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 17501003 - 17501054
Alignment:
Q  196 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 247  Q
    ||||| ||||||||||| |||| ||||||| ||||| |||||||||||||||    
T  17501003 aacatgtttgtaacatgaatagtcattttaaggacattattaatcttcctaa 17501054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 21517630 - 21517572
Alignment:
Q  67 aacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccc 125  Q
    |||| |||||||||||||| | ||||| |||||||| ||||||||||| || |||||||    
T  21517630 aactccaaaaaatagggcgtgctacataatgtttccggattacataattcggaaacccc 21517572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 337
Target Start/End: Original strand, 7412971 - 7413028
Alignment:
Q  280 tgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 337  Q
    ||||||||| |||||||| | ||||||| ||| |||||||||||||||  ||||||||    
T  7412971 tgttcttagccaaaaatcaggttttcggactagttgatcggattgctccgaaacttcc 7413028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 168; Significance: 1e-89; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 4 - 335
Target Start/End: Complemental strand, 9709 - 9380
Alignment:
Q  4 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 103  Q
    ||||||||| |||| ||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  9709 tgttttcctttgttatagggtgaaaaatagagttacgggtttttccgaattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccg 9610  T
Q  104 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 202  Q
    |||||||||||||||||||||||  |||||||||||| || ||        |||||||||||||||||||||| |||||||||| |||| ||| |||| |    
T  9609 gattacataatccgaaaaccccctgaacaccctttttcaaagtaaaac---agttcggattatataatccgaactgtatcagcataaattctatacatgt 9513  T
Q  203 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 302  Q
    |||||||||| |||| ||||||| ||||||||||||| ||  ||||| | ||| || | |||||||||||| |||| |||||||||| ||||||||||||    
T  9512 ttgtaacatggatagtcattttatggacaatattaatatttataactttcatcattctgttttgggtcattgttacatgttcttagttaaaaatcggatt 9413  T
Q  303 ttcgggctacttgatcggattgctctaaaactt 335  Q
    |||||  ||||||||||||||||||| ||||||    
T  9412 ttcggattacttgatcggattgctctgaaactt 9380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 166; Significance: 2e-88; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 142177 - 141843
Alignment:
Q  1 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 100  Q
    |||||||||| | ||||  |||||||||||||  || || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  142177 tgatgttttcttttgttaaagggtgaaaaatgt-gtaacagatttttccagattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 142079  T
Q  101 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 199  Q
    || |||||||||||||| |||||||| ||||||||||||| |||||       | |||  |||||||||||||||| ||||||||||||||| |||||||    
T  142078 ccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa---ttgttgagattatataatccgaactgtatcagcacaaattctaaaca 141982  T
Q  200 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 299  Q
    | ||||||||||| |||| ||||||||||||||||||||||||||||||||  |||||| |  ||||||||||| || | ||||||||||||||||||||    
T  141981 tgtttgtaacatggatagtcattttagggacaatattaatcttcctaactcccatccttct-gtttgggtcattgttgcatgttcttagtcaaaaatcgg 141883  T
Q  300 attttcgggctacttgatcggattgctctaaaacttcccc 339  Q
     ||||| | |||||||||||||||||||  ||||||||||    
T  141882 gttttcagactacttgatcggattgctccgaaacttcccc 141843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 142; Significance: 3e-74; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 43 - 339
Target Start/End: Complemental strand, 3568 - 3273
Alignment:
Q  43 tttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttta 141  Q
    ||||| || |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||  ||||||||||||| |    
T  3568 ttttttcgaattttgtaatctagaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccataaacaccctttttca 3469  T
Q  142 aggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatct 241  Q
    ||||        |||||||||||||||||| ||| |||||| || ||||| |||||||| ||||||||||  |||  |||||||||||||||||||||||    
T  3468 aggtaaaac---agttcggattatataatctgaactgtatcggcgcaaattctaaacatgtttgtaacatcgataatcattttagggacaatattaatct 3372  T
Q  242 tcctaactcttatccttttattttgggtcattcttacttgttcttagt-caaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    || ||||||| |||||| | |||||||||||| |||||||||||||||  ||||||| | |||||||||||||||||| ||||||||| ||||||||||    
T  3371 tcgtaactctcatccttctgttttgggtcattgttacttgttcttagtaaaaaaatcaggttttcgggctacttgatcagattgctctgaaacttcccc 3273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 194 - 339
Target Start/End: Original strand, 140620 - 140765
Alignment:
Q  194 taaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaa 293  Q
    ||||||| ||||||||||  |||| ||||||||||||||||||||||||||||||||| |||||||| |||| ||||||| |||||||||||||||||||    
T  140620 taaacatgtttgtaacattgatagtcattttagggacaatattaatcttcctaactctcatccttttgttttaggtcattgttacttgttcttagtcaaa 140719  T
Q  294 aatcggattttcgggctacttgatcggattgctctaaaacttcccc 339  Q
    |||||| ||||| | |||||||||||||||||||  ||||||||||    
T  140720 aatcgggttttcagactacttgatcggattgctccgaaacttcccc 140765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 23069 - 23205
Alignment:
Q  3 atgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcc 102  Q
    |||||||| | ||||| ||||||||||||| ||| ||||||||||||| ||||| |||||||||||||||||||||||||| || |||||||||||||||    
T  23069 atgttttcttttgttgaagggtgaaaaatg-agtaacggatttttccgaattttataatccggaaacttcaaaaaatagggtgcattacatgatgtttcc 23167  T
Q  103 cgattacataatccgaaaaccccc-aaacacccttttt 139  Q
     ||||| |||||||| |||||||| ||||||| |||||    
T  23168 ggattatataatccggaaaccccctaaacacctttttt 23205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 23228 - 23301
Alignment:
Q  185 cacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 258  Q
    ||||||| | |||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||    
T  23228 cacaaattcgaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcctt 23301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 323
Target Start/End: Complemental strand, 60028 - 59865
Alignment:
Q  160 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 259  Q
    |||||||||||  ||| |||| ||||||||||  | ||||| ||||||||||  |||| |||||||  ||||||||||||||||||||||| |      |    
T  60028 gattatataatatgaactgtaccagcacaaattttgaacatgtttgtaacatagatagtcattttaaagacaatattaatcttcctaactcatggatagt 59929  T
Q  260 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 323  Q
     ||||| ||||||| |||   ||||||||||||||||  |||||||||| ||||||||| ||||    
T  59928 cattttaggtcattgttagccgttcttagtcaaaaatttgattttcgggttacttgatcagatt 59865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 179 - 250
Target Start/End: Original strand, 59480 - 59551
Alignment:
Q  179 tatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 250  Q
    |||||| ||||||  ||||||| ||||| ||||| |||| ||||||| |||||||||||||||| |||||||    
T  59480 tatcagtacaaattttaaacatgtttgtgacatggatagtcattttaaggacaatattaatctttctaactc 59551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 159 - 327
Target Start/End: Original strand, 4471 - 4639
Alignment:
Q  159 ggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 258  Q
    ||||||||||||| ||| |||||| ||||||||  | ||| | ||||||| ||  |||| |||||||  ||| |||||||||||| ||||  | ||| ||    
T  4471 ggattatataatctgaactgtatcggcacaaattttgaacctgtttgtaaaatagatagtcattttaaagaccatattaatcttcttaaccatcatcatt 4570  T
Q  259 ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 327  Q
     | |||  ||||||| ||| |||||| ||||| |||||  | |||| | |||| |||||||||||||||    
T  4571 atgtttgaggtcattgttagttgttcctagtccaaaatacggtttttgagctatttgatcggattgctc 4639  T

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