View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2156_low_11 (Length: 227)
Name: NF2156_low_11
Description: NF2156
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2156_low_11 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 40498136 - 40497910
Alignment:
| Q |
1 |
tatcccagttctttaataattctcgtttgtttaattttcctctacaatatagtgtcctggtaaacttgtttttgtatattcttactttcatattggtaac |
100 |
Q |
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| T |
40498136 |
tatcccagttctttaataattctcgtttgtttaattttcctctacaatatagtgtcctagtaaacttgtttttgtatattcttactttcatattggtaac |
40498037 |
T |
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| Q |
101 |
caaaaggtacgttgtttctttgttttgtgttgccatgtttcaaagactcttttgtaacataacatgtacttagtagtaaattaactctatttcatttttg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
40498036 |
caaaaggtacgttgtttctttgttttgtgttgccatgtttcaaagactcttttgtaacataacatgtacttagtagtaatttaactctatttcatttttt |
40497937 |
T |
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| Q |
201 |
aacagattttggcatctaatggcaaat |
227 |
Q |
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|||||||||||| || ||||||||||| |
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| T |
40497936 |
aacagattttggtatttaatggcaaat |
40497910 |
T |
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