View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21572_high_15 (Length: 262)
Name: NF21572_high_15
Description: NF21572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21572_high_15 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 36353663 - 36353930
Alignment:
| Q |
1 |
aatattacatagagttcacacacactgacctccaacgtgaaccgat----gaagcaacgacacaagcataaatattagacacaatactgcactagctcct |
96 |
Q |
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| T |
36353663 |
aatattacatagagttcacacacactgacctccaacgtcaaccgatcgatgaagcaacgacacaagcataaatattagacacaatactgcactagctcct |
36353762 |
T |
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| Q |
97 |
acac--taatatttctttaacaaaacgagtggttgaacgtaactatatatgtcagtatcatgtcggtatcagacatccaatctgaagtgtcgattctata |
194 |
Q |
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|||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
36353763 |
acacaataatatttctttaacaaaacaagtggttgaacgtaactatatatatcagtatcatgtcggtatcagacctccaatctgaagtgtcgattctata |
36353862 |
T |
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| Q |
195 |
tagatgccaactagttgagaattagatcttcatcttgtagcgaaaggaaaccaacgttcgtgaaaaga |
262 |
Q |
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||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
36353863 |
tagataccaactagttgagaatgagatcttcatcttgtagcgaaaggaaaccaacgttcatgaaaaga |
36353930 |
T |
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