View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21572_low_11 (Length: 364)
Name: NF21572_low_11
Description: NF21572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21572_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 326; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 16 - 349
Target Start/End: Complemental strand, 33401274 - 33400941
Alignment:
| Q |
16 |
ggaggagcagagagtgtgattctatcaaccacaacatggattggtggaaaaaatgatttcttggggattgcatatattctcattggtggactttccttgg |
115 |
Q |
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| T |
33401274 |
ggaggaacaaagagtgtgattctatcaaccacaacatggattggtggaaaaaatgatttcttggggattgcatatattctcattggtggactttccttgg |
33401175 |
T |
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| Q |
116 |
tgtactctctagttttcctacttatgtatttgatgaagccaaggtgaggaaaaactatacattcttcatcatctttatacattatggtttttctgtcatt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33401174 |
tgtactctctagttttcctacttatgtatttgatgaagccaaggtgaggaaaaactatacattcttcatcatctttatacattatggtttttctgtcatt |
33401075 |
T |
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| Q |
216 |
gcttttatgggtgaagatattttttgttgacgttgtttatattgttgtgtgtgtatatgcagaccccttggagatccaagatacctgacttggaacaaaa |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33401074 |
gcttttatgggtgaagatattttttgttgacgttgtttatattgttgtgtgtgtatatgcagaccccttggagatccaagatacctgacttggaacaaaa |
33400975 |
T |
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| Q |
316 |
attcaaaatgtttgaactgatgatgtaggatatt |
349 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
33400974 |
attcaaaatgtttgaactgatgatgtaggatatt |
33400941 |
T |
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