View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21578_low_1 (Length: 1249)

Name: NF21578_low_1
Description: NF21578
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21578_low_1
NF21578_low_1
[»] chr7 (49 HSPs)
chr7 (846-1232)||(35443928-35444320)
chr7 (445-782)||(35443538-35443864)
chr7 (99-286)||(35443205-35443393)
chr7 (1-101)||(35443046-35443146)
chr7 (1080-1155)||(20243256-20243332)
chr7 (1075-1155)||(44558755-44558834)
chr7 (1075-1155)||(19416515-19416595)
chr7 (1092-1149)||(21134437-21134494)
chr7 (1094-1153)||(5483333-5483392)
chr7 (1080-1155)||(10244728-10244802)
chr7 (1075-1150)||(23154572-23154647)
chr7 (1080-1153)||(4406697-4406771)
chr7 (1092-1150)||(9522918-9522975)
chr7 (1075-1143)||(8290449-8290518)
chr7 (1094-1155)||(34722020-34722081)
chr7 (1108-1157)||(41250061-41250109)
chr7 (1111-1155)||(19793805-19793849)
chr7 (1122-1158)||(29488404-29488440)
chr7 (1122-1158)||(33232738-33232774)
chr7 (1122-1158)||(34284880-34284916)
chr7 (1075-1146)||(37624553-37624624)
chr7 (1108-1155)||(5458085-5458131)
chr7 (1092-1155)||(19599146-19599208)
chr7 (1080-1119)||(20479879-20479917)
chr7 (1092-1155)||(23198747-23198809)
chr7 (1073-1155)||(35142127-35142209)
chr7 (1075-1145)||(36343515-36343586)
chr7 (1080-1150)||(36769156-36769227)
chr7 (1111-1154)||(37307891-37307933)
chr7 (1111-1150)||(44473326-44473365)
chr7 (1092-1143)||(44651963-44652014)
chr7 (1120-1155)||(45200194-45200229)
chr7 (1092-1155)||(46987087-46987149)
chr7 (1101-1155)||(1285076-1285129)
chr7 (1101-1155)||(7670435-7670488)
chr7 (1080-1137)||(8084446-8084503)
chr7 (1109-1155)||(13955481-13955526)
chr7 (1080-1149)||(27462421-27462490)
chr7 (1074-1159)||(33610904-33610989)
chr7 (1092-1150)||(36765504-36765562)
chr7 (1080-1145)||(37235322-37235387)
chr7 (1109-1155)||(38728209-38728255)
chr7 (1092-1150)||(40036103-40036161)
chr7 (1101-1155)||(43539111-43539164)
chr7 (1092-1150)||(47840663-47840721)
chr7 (1082-1150)||(3671830-3671898)
chr7 (1067-1155)||(21105604-21105692)
chr7 (1075-1148)||(24099216-24099288)
chr7 (1101-1150)||(39280825-39280873)
[»] chr8 (39 HSPs)
chr8 (1080-1167)||(37749984-37750071)
chr8 (1075-1150)||(9663034-9663109)
chr8 (1108-1158)||(29652216-29652265)
chr8 (1075-1155)||(39433411-39433491)
chr8 (1075-1155)||(33451330-33451409)
chr8 (1080-1153)||(19260564-19260637)
chr8 (1092-1138)||(34645083-34645129)
chr8 (1075-1155)||(23852912-23852992)
chr8 (1101-1150)||(24195255-24195303)
chr8 (1109-1158)||(26991772-26991820)
chr8 (1092-1153)||(39525381-39525442)
chr8 (1122-1158)||(20665704-20665740)
chr8 (1080-1155)||(30218204-30218279)
chr8 (1107-1151)||(44068005-44068049)
chr8 (1092-1155)||(1921721-1921784)
chr8 (1120-1159)||(13284290-13284329)
chr8 (1078-1132)||(22975826-22975881)
chr8 (1096-1155)||(26885640-26885698)
chr8 (1108-1155)||(27718908-27718954)
chr8 (1092-1155)||(30623294-30623356)
chr8 (1081-1155)||(32051518-32051592)
chr8 (1092-1155)||(34997459-34997522)
chr8 (1116-1155)||(35372119-35372158)
chr8 (1080-1150)||(36059346-36059417)
chr8 (1080-1150)||(38139244-38139315)
chr8 (1093-1155)||(1764953-1765014)
chr8 (1101-1155)||(2554219-2554272)
chr8 (1109-1155)||(8717490-8717535)
chr8 (1092-1146)||(11052986-11053039)
chr8 (1092-1150)||(38137802-38137860)
chr8 (1104-1150)||(44087244-44087290)
chr8 (1075-1155)||(7996941-7997020)
chr8 (1093-1158)||(9655996-9656060)
chr8 (1080-1144)||(12748913-12748977)
chr8 (1075-1155)||(13577077-13577157)
chr8 (1075-1155)||(19163516-19163596)
chr8 (1085-1150)||(32192900-32192964)
chr8 (1108-1153)||(40919373-40919417)
chr8 (1122-1155)||(44215816-44215849)
[»] scaffold0743 (1 HSPs)
scaffold0743 (1075-1155)||(1399-1479)
[»] chr2 (48 HSPs)
chr2 (1092-1158)||(19595476-19595542)
chr2 (1075-1155)||(19976154-19976235)
chr2 (1080-1158)||(16221331-16221409)
chr2 (1075-1155)||(25186222-25186302)
chr2 (1094-1158)||(17280948-17281011)
chr2 (1080-1155)||(21482504-21482579)
chr2 (1072-1143)||(21870872-21870944)
chr2 (1080-1155)||(27411093-27411168)
chr2 (1080-1155)||(33063987-33064062)
chr2 (1108-1155)||(29734692-29734738)
chr2 (1092-1155)||(39761439-39761500)
chr2 (1081-1155)||(42066713-42066787)
chr2 (1074-1155)||(2256972-2257053)
chr2 (1074-1155)||(7052774-7052856)
chr2 (1080-1158)||(16439346-16439424)
chr2 (1088-1158)||(25626018-25626087)
chr2 (1080-1153)||(29133469-29133542)
chr2 (1093-1155)||(39068707-39068768)
chr2 (1075-1155)||(9383189-9383269)
chr2 (1094-1156)||(13143104-13143169)
chr2 (1110-1155)||(37119274-37119318)
chr2 (1122-1158)||(3708377-3708413)
chr2 (1122-1158)||(11869003-11869039)
chr2 (1095-1155)||(12124546-12124605)
chr2 (1122-1158)||(35360396-35360432)
chr2 (1080-1150)||(6765616-6765686)
chr2 (1080-1155)||(7201508-7201582)
chr2 (1080-1155)||(15654855-15654929)
chr2 (1120-1155)||(19967419-19967454)
chr2 (1108-1155)||(23718936-23718982)
chr2 (1108-1155)||(24106608-24106654)
chr2 (1080-1150)||(24592831-24592901)
chr2 (1075-1149)||(41778924-41778998)
chr2 (1092-1155)||(41859853-41859915)
chr2 (1092-1158)||(11817343-11817409)
chr2 (1092-1150)||(25274827-25274884)
chr2 (1088-1150)||(25598556-25598617)
chr2 (1104-1158)||(30956427-30956480)
chr2 (1070-1155)||(35287639-35287724)
chr2 (1074-1155)||(41187436-41187517)
chr2 (1092-1150)||(45474655-45474713)
chr2 (1075-1132)||(5676763-5676819)
chr2 (1101-1158)||(18782547-18782603)
chr2 (1109-1146)||(19159951-19159987)
chr2 (1075-1155)||(20455892-20455972)
chr2 (1094-1155)||(24593377-24593437)
chr2 (1101-1150)||(36474768-36474816)
chr2 (1093-1150)||(37522629-37522686)
[»] chr1 (43 HSPs)
chr1 (1084-1155)||(24752636-24752708)
chr1 (1080-1155)||(14907021-14907096)
chr1 (1070-1146)||(5552977-5553052)
chr1 (1080-1155)||(7158774-7158849)
chr1 (1080-1155)||(42888576-42888651)
chr1 (1109-1155)||(3393583-3393628)
chr1 (1075-1155)||(52441491-52441571)
chr1 (1080-1155)||(34521175-34521250)
chr1 (1080-1155)||(39452461-39452537)
chr1 (1092-1155)||(20006071-20006134)
chr1 (1092-1155)||(21965889-21965952)
chr1 (1080-1146)||(45774584-45774651)
chr1 (1108-1150)||(15549250-15549292)
chr1 (1093-1155)||(29233973-29234034)
chr1 (1080-1153)||(39879210-39879284)
chr1 (1101-1155)||(44641528-44641581)
chr1 (1108-1162)||(45701322-45701375)
chr1 (1102-1155)||(925434-925487)
chr1 (1075-1155)||(32944737-32944817)
chr1 (1080-1156)||(40227829-40227905)
chr1 (1075-1155)||(42045352-42045432)
chr1 (1080-1124)||(2684422-2684466)
chr1 (1075-1150)||(3509921-3509996)
chr1 (1092-1155)||(7550897-7550959)
chr1 (1080-1155)||(21400009-21400083)
chr1 (1092-1163)||(23203315-23203385)
chr1 (1090-1145)||(28053236-28053291)
chr1 (1101-1155)||(12213994-12214047)
chr1 (1096-1158)||(13778814-13778876)
chr1 (1109-1155)||(17917153-17917198)
chr1 (1101-1155)||(26755617-26755670)
chr1 (1109-1155)||(29450996-29451042)
chr1 (1108-1150)||(40021376-40021418)
chr1 (1101-1155)||(48646732-48646786)
chr1 (1109-1155)||(48681948-48681993)
chr1 (1092-1150)||(49571138-49571196)
chr1 (1113-1151)||(50727299-50727337)
chr1 (1073-1146)||(2884427-2884499)
chr1 (587-624)||(12018490-12018527)
chr1 (1094-1151)||(13953874-13953930)
chr1 (1075-1155)||(17139497-17139577)
chr1 (1075-1155)||(17280065-17280144)
chr1 (1108-1157)||(30561722-30561770)
[»] chr4 (51 HSPs)
chr4 (1075-1155)||(3936628-3936708)
chr4 (1075-1155)||(35287487-35287567)
chr4 (1080-1155)||(9946428-9946503)
chr4 (1075-1158)||(11949743-11949826)
chr4 (1080-1155)||(28435233-28435308)
chr4 (1080-1155)||(56361798-56361874)
chr4 (1092-1155)||(19479475-19479537)
chr4 (1080-1153)||(18138265-18138339)
chr4 (1092-1150)||(40849660-40849718)
chr4 (1080-1153)||(49125474-49125548)
chr4 (1102-1155)||(19935169-19935221)
chr4 (1109-1154)||(22040652-22040696)
chr4 (1122-1158)||(10262110-10262146)
chr4 (1075-1155)||(12698598-12698677)
chr4 (1122-1158)||(19587837-19587873)
chr4 (1108-1156)||(20403182-20403229)
chr4 (1122-1158)||(21562309-21562345)
chr4 (1122-1158)||(24080181-24080217)
chr4 (1080-1155)||(24664976-24665051)
chr4 (1092-1164)||(34033325-34033396)
chr4 (1080-1155)||(38453266-38453341)
chr4 (1122-1158)||(43329830-43329866)
chr4 (1080-1155)||(54857600-54857675)
chr4 (1080-1146)||(11144650-11144716)
chr4 (1080-1150)||(26097722-26097793)
chr4 (586-625)||(26863129-26863168)
chr4 (1080-1150)||(29099694-29099765)
chr4 (1092-1155)||(32139340-32139403)
chr4 (1092-1155)||(35021465-35021527)
chr4 (1120-1155)||(35998000-35998035)
chr4 (1109-1156)||(48251923-48251969)
chr4 (1080-1150)||(52620570-52620641)
chr4 (1092-1155)||(56564981-56565043)
chr4 (1101-1159)||(897422-897479)
chr4 (1075-1149)||(8020629-8020701)
chr4 (1092-1150)||(11180839-11180897)
chr4 (1092-1150)||(16431622-16431679)
chr4 (1101-1155)||(20383489-20383542)
chr4 (1109-1155)||(39171385-39171430)
chr4 (1092-1150)||(43117447-43117505)
chr4 (1109-1155)||(43374287-43374332)
chr4 (1080-1157)||(46676483-46676560)
chr4 (1101-1162)||(675912-675972)
chr4 (1073-1153)||(2649711-2649791)
chr4 (1075-1155)||(8027377-8027457)
chr4 (1075-1155)||(12671728-12671808)
chr4 (1108-1153)||(16304112-16304156)
chr4 (1110-1151)||(19347335-19347375)
chr4 (1075-1155)||(22164249-22164329)
chr4 (1075-1155)||(23247578-23247658)
chr4 (1075-1155)||(32180831-32180911)
[»] scaffold0735 (1 HSPs)
scaffold0735 (1080-1155)||(1529-1604)
[»] chr6 (24 HSPs)
chr6 (1080-1155)||(12700406-12700481)
chr6 (1092-1155)||(34828307-34828370)
chr6 (1092-1155)||(9111048-9111110)
chr6 (1080-1153)||(6018644-6018718)
chr6 (1080-1155)||(24269884-24269960)
chr6 (1092-1158)||(33975927-33975993)
chr6 (1075-1155)||(655729-655809)
chr6 (1075-1155)||(13496117-13496197)
chr6 (1075-1155)||(24623297-24623377)
chr6 (1122-1158)||(247343-247379)
chr6 (1075-1155)||(4494852-4494931)
chr6 (1092-1155)||(9392666-9392728)
chr6 (1115-1150)||(14036299-14036334)
chr6 (1092-1155)||(20744139-20744201)
chr6 (1092-1155)||(26400865-26400927)
chr6 (1081-1146)||(2445309-2445374)
chr6 (1092-1146)||(2726415-2726468)
chr6 (1101-1151)||(8138465-8138514)
chr6 (1109-1155)||(12904332-12904377)
chr6 (1109-1155)||(14350950-14350995)
chr6 (1092-1150)||(19988827-19988885)
chr6 (1109-1155)||(32193874-32193919)
chr6 (1109-1155)||(33938694-33938739)
chr6 (1101-1150)||(33824887-33824935)
[»] chr5 (39 HSPs)
chr5 (1080-1156)||(25385052-25385127)
chr5 (1080-1162)||(26655458-26655540)
chr5 (1080-1162)||(26927043-26927125)
chr5 (1092-1150)||(16166373-16166431)
chr5 (1078-1158)||(5150065-5150146)
chr5 (1080-1155)||(6624777-6624852)
chr5 (1080-1155)||(31561329-31561404)
chr5 (1092-1155)||(18489074-18489136)
chr5 (1080-1155)||(18589853-18589927)
chr5 (1075-1155)||(22522781-22522861)
chr5 (1090-1155)||(26409254-26409318)
chr5 (1095-1152)||(27479631-27479688)
chr5 (1075-1155)||(34436852-34436932)
chr5 (1094-1155)||(37932331-37932391)
chr5 (1080-1155)||(6489008-6489083)
chr5 (1074-1150)||(12189998-12190073)
chr5 (1095-1147)||(31708147-31708198)
chr5 (1122-1158)||(37461795-37461831)
chr5 (1080-1155)||(40715934-40716009)
chr5 (1080-1150)||(2530016-2530087)
chr5 (1075-1146)||(5614775-5614845)
chr5 (1123-1158)||(13351454-13351489)
chr5 (1120-1159)||(18147715-18147754)
chr5 (1108-1155)||(32283580-32283627)
chr5 (1120-1155)||(33584085-33584120)
chr5 (597-636)||(35922124-35922163)
chr5 (1109-1155)||(7713533-7713578)
chr5 (1092-1150)||(8314759-8314817)
chr5 (1101-1155)||(10704338-10704391)
chr5 (1109-1155)||(27903114-27903159)
chr5 (1092-1146)||(37146999-37147053)
chr5 (1092-1150)||(42111894-42111952)
chr5 (1111-1156)||(1488364-1488409)
chr5 (531-564)||(6500011-6500044)
chr5 (1120-1153)||(13409553-13409586)
chr5 (1102-1155)||(13796331-13796383)
chr5 (1075-1155)||(25603980-25604060)
chr5 (1075-1155)||(28207133-28207213)
chr5 (1109-1150)||(31602840-31602880)
[»] chr3 (43 HSPs)
chr3 (1075-1155)||(21506740-21506818)
chr3 (1081-1155)||(52904130-52904203)
chr3 (1074-1155)||(20370261-20370341)
chr3 (1080-1148)||(44582732-44582801)
chr3 (1075-1155)||(47313351-47313432)
chr3 (1080-1155)||(25340909-25340984)
chr3 (1075-1150)||(52575953-52576028)
chr3 (1092-1155)||(28244102-28244164)
chr3 (1092-1155)||(44579637-44579699)
chr3 (1109-1156)||(51505873-51505919)
chr3 (1073-1150)||(25441478-25441555)
chr3 (1075-1155)||(14827526-14827606)
chr3 (1075-1155)||(38130939-38131019)
chr3 (1101-1150)||(38894043-38894091)
chr3 (1075-1155)||(53996300-53996380)
chr3 (1122-1158)||(916201-916237)
chr3 (1115-1155)||(5030206-5030246)
chr3 (1092-1156)||(54230097-54230160)
chr3 (1075-1146)||(21160062-21160132)
chr3 (1080-1158)||(29631184-29631262)
chr3 (1096-1155)||(32629081-32629139)
chr3 (1107-1150)||(40862177-40862220)
chr3 (1108-1155)||(43345021-43345067)
chr3 (1108-1155)||(43490431-43490477)
chr3 (1104-1150)||(4216409-4216454)
chr3 (1101-1155)||(25874131-25874185)
chr3 (1101-1155)||(33745100-33745153)
chr3 (1092-1150)||(46090201-46090259)
chr3 (1092-1150)||(48961053-48961111)
chr3 (1109-1155)||(49088753-49088798)
chr3 (1113-1155)||(51379798-51379839)
chr3 (1080-1155)||(4947811-4947887)
chr3 (1075-1155)||(7827509-7827589)
chr3 (1094-1155)||(10617554-10617615)
chr3 (1093-1150)||(13337034-13337091)
chr3 (1080-1157)||(25505687-25505763)
chr3 (1093-1150)||(35191816-35191872)
chr3 (1108-1153)||(39100098-39100142)
chr3 (1094-1155)||(43316600-43316661)
chr3 (1093-1150)||(45096032-45096088)
chr3 (1093-1150)||(50739088-50739145)
chr3 (1093-1150)||(50773710-50773767)
chr3 (1120-1153)||(51402738-51402771)
[»] scaffold0259 (1 HSPs)
scaffold0259 (1080-1153)||(5416-5489)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1080-1155)||(37536-37611)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1074-1155)||(6980-7062)
[»] scaffold0122 (1 HSPs)
scaffold0122 (1109-1155)||(14201-14246)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1108-1162)||(47255-47308)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1092-1150)||(138112-138170)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1108-1146)||(189604-189642)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1109-1155)||(244480-244526)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1075-1155)||(17733-17812)


Alignment Details
Target: chr7 (Bit Score: 280; Significance: 1e-156; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 846 - 1232
Target Start/End: Original strand, 35443928 - 35444320
Alignment:
Q  846 agccaacttgattttttaatctaaaatatctttaagaaatctatttaattacttattcaaataaaaaatagagattcctttgtaaataaataaagatttg 945  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35443928 agccaacttgattttttaatctaaaatatctttaagaaatctatttaattacttattcaaataaaaaatagagattcctttgtaaataaataaagatttg 35444027  T
Q  946 aactgttacnnnnnnnnnnn--taaagatttgaattagctaagttttgaataccgaaagaaattagttaagtttttaaatcaaatattcgaatgaaaaat 1043  Q
    |||||||||             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35444028 aactgttacaaaaaaaaaaaaataaagatttgaattagctaagttttgaataccgaaagaaattagttaagtttttaaatcaaatattcgaatgaaaaat 35444127  T
Q  1044 ataatatttagctgnnnnnnn-acatgatatattttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaac 1142  Q
    ||||||||||||||        |||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  35444128 ataatatttagctgttttttttacatgatatattttcttttggtggtggcagggttcaaaccctcgaccatgcatattattatgcattgttcatatcaac 35444227  T
Q  1143 tgagctaaactcatgaaaacttttacatg----atatatttttgttaaaaaagtctggtgaccaaaaatttatttttaagtaaataaatagata 1232  Q
     ||||||||||||||||||||||||||||    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  35444228 ggagctaaactcatgaaaacttttacatgatatatatatttttgtt-aaaaagtctggtgaccaaaaatttatttttaagtaaataaatagata 35444320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 445 - 782
Target Start/End: Original strand, 35443538 - 35443864
Alignment:
Q  445 ataaaattatatattcaaggtacaaaatcaaattatttgactttttgaataaataacatttttatttagatattataattcacagtttgacattttagat 544  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  35443538 ataaaattatatattcaatgtacaaaatcaaattatttaactttttgaataaataacatttttatttagatattctaattcacagtttgactttttagat 35443637  T
Q  545 ttattagataattgatgtatctaatctgaaatatatgtcaaatatatgtcagatacatcaattatttaatgaatttaaaattttaattgttttttgtcct 644  Q
    ||||||||||||||||||||||| ||||||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35443638 ttattagataattgatgtatctagtctgaaat-----------atatgtcagatacatcaattatttaatgaatttaaaattttaattgttttttgtcct 35443726  T
Q  645 taagacgtgacagaaaactatacaagaagaaaaatagatttgagaattaaaaacgtgcagataattagagaatggacacggattcatgcgataacttacg 744  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35443727 taagacctgacagaaaactatacaagaagaaaaatagatttgagaattaaaaacgtgcagataattagagaatggacacggattcatgcgataacttacg 35443826  T
Q  745 cacttatcaaagtgtattattatgcctctaatatattg 782  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  35443827 cacttatcaaagtatattattatgcctctaatatattg 35443864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 181; E-Value: 4e-97
Query Start/End: Original strand, 99 - 286
Target Start/End: Original strand, 35443205 - 35443393
Alignment:
Q  99 acaaacataaaa-aaggtaaagaacaaaggtgattcctttgtttattttcgcaaaattctattctaaatcaacaatgagtgaagtgtatcatatcattag 197  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35443205 acaaacataaaaaaaggtaaagaacaaaggtgattcctttgtttattttcgcaaaattctattctaaatcaacaatgagtgaagtgtatcatatcattag 35443304  T
Q  198 agagaggtcaattaattacctggtcaacatcttgacgagtaataagagtatgcattgcggatccacttgacgtatcgcaaatattagag 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35443305 agagaggtcaattaattacctggtcaacatcttgacgagtaataagagtatgcattgcggatccacttgacgtatcgcaaatattagag 35443393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 35443046 - 35443146
Alignment:
Q  1 ccctatctactatttactaatcaaaaaataaaacctcattctatacaaaatttccaactgcataaaaccacgagaagaaatgcaatctatacaaatatac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35443046 ccctatctactatttactaatcaaaaaataaaacctcattctatacaaaatttccaactgcataaaaccacgagaagaaatgcaatctatacaaatatac 35443145  T
Q  101 a 101  Q
    |    
T  35443146 a 35443146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Complemental strand, 20243332 - 20243256
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||| | |||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||| ||||    
T  20243332 ttttggtggtgtccggggttcaaaccccggaccttgcatattattatgcattgtccataccaactgagctaagctca 20243256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 44558755 - 44558834
Alignment:
Q  1075 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| |||||||| ||| ||||||| | |||||||||||| |||||||||||| |||| |||||||||||||||||    
T  44558755 ttttttttttgtggtggccggggtcaaacctcagaccttgcatat-attatgcattgtccataccaactgagctaaactca 44558834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Complemental strand, 19416595 - 19416515
Alignment:
Q  1075 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| ||||||||||||| ||||||  |||||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  19416595 tttttttttggtggtggccggggtttgaaccccggaccttgcatatt-ttatgcattgtccataccaactgagctaagctca 19416515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1092 - 1149
Target Start/End: Original strand, 21134437 - 21134494
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagcta 1149  Q
    |||||||||||||| |||||||||||||  |||||||||||  |||||||||||||||    
T  21134437 cggggttcaaacccgcgaccttgcatatatttatgcattgtctatatcaactgagcta 21134494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1094 - 1153
Target Start/End: Complemental strand, 5483392 - 5483333
Alignment:
Q  1094 gggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 1153  Q
    |||||| ||||| |||||||||||||  |||| ||||||| |||||||||||||||||||    
T  5483392 gggttcgaacccgcgaccttgcatatatttatacattgtttatatcaactgagctaaact 5483333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Complemental strand, 10244802 - 10244728
Alignment:
Q  1080 ttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||||||| |||||  |||||| |||||||||||| |||||||||||| |||| |||||||||||| ||||    
T  10244802 tttttgtggtggccgggtttgaaccccggaccttgcatat-attatgcattgtccataccaactgagctaagctca 10244728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1075 - 1150
Target Start/End: Complemental strand, 23154647 - 23154572
Alignment:
Q  1075 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||| |||| |||||| | |||||||||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  23154647 ttttttttttgtggtgtcagggttcaaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 23154572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1080 - 1153
Target Start/End: Original strand, 4406697 - 4406771
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 1153  Q
    ||||||||||| | ||||||| ||| | |||||||||||||  |||||||||||  |||||||||||||||||||    
T  4406697 ttttggtggtgtccggggttcgaactcgcgaccttgcatatatttatgcattgtctatatcaactgagctaaact 4406771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1092 - 1150
Target Start/End: Complemental strand, 9522975 - 9522918
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||| ||||||  ||||||||||| ||||||||||||||||| ||||||||||||    
T  9522975 cggggttcgaaccccaaaccttgcatat-attatgcattgttcataccaactgagctaa 9522918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1075 - 1143
Target Start/End: Original strand, 8290449 - 8290518
Alignment:
Q  1075 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaact 1143  Q
    |||| |||| ||||||| |||| ||| |||||| ||||||||||||||||||||||||| |||| |||||    
T  8290449 ttttttttttgtggtggtcgggattcgaaccccggaccttgcatattattatgcattgtccataccaact 8290518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1094 - 1155
Target Start/End: Original strand, 34722020 - 34722081
Alignment:
Q  1094 gggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||| |||| | |||||| ||||||||||||||||||||||| |||||||| ||| ||||    
T  34722020 gggttcgaacctcggaccttacatattattatgcattgttcataccaactgagttaagctca 34722081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1108 - 1157
Target Start/End: Original strand, 41250061 - 41250109
Alignment:
Q  1108 gaccttgcatattattatgcattgttcatatcaactgagctaaactcatg 1157  Q
    |||||||||||| ||||| |||||||| ||||||||||||||||||||||    
T  41250061 gaccttgcatat-attatacattgttcttatcaactgagctaaactcatg 41250109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1111 - 1155
Target Start/End: Complemental strand, 19793849 - 19793805
Alignment:
Q  1111 cttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||||| ||||||||| ||||||||||||| ||||||||    
T  19793849 cttgcatattatcatgcattgtccatatcaactgagttaaactca 19793805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1122 - 1158
Target Start/End: Complemental strand, 29488440 - 29488404
Alignment:
Q  1122 ttatgcattgttcatatcaactgagctaaactcatga 1158  Q
    ||||||||||||| |||||||||||||||||||||||    
T  29488440 ttatgcattgttcctatcaactgagctaaactcatga 29488404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1122 - 1158
Target Start/End: Original strand, 33232738 - 33232774
Alignment:
Q  1122 ttatgcattgttcatatcaactgagctaaactcatga 1158  Q
    ||||||||||||| |||||||||||||||||||||||    
T  33232738 ttatgcattgttcctatcaactgagctaaactcatga 33232774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1122 - 1158
Target Start/End: Original strand, 34284880 - 34284916
Alignment:
Q  1122 ttatgcattgttcatatcaactgagctaaactcatga 1158  Q
    ||||||||||||| |||||||||||||||||||||||    
T  34284880 ttatgcattgttcctatcaactgagctaaactcatga 34284916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1075 - 1146
Target Start/End: Complemental strand, 37624624 - 37624553
Alignment:
Q  1075 ttttcttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 1146  Q
    |||| |||| |||||||| ||| ||| |||||||||||||||||| ||||||||||||| |||| ||||||||    
T  37624624 ttttttttttgtggtggccgggattcgaacccccgaccttgcata-tattatgcattgtccataccaactgag 37624553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1108 - 1155
Target Start/End: Original strand, 5458085 - 5458131
Alignment:
Q  1108 gaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  5458085 gaccttgcatat-attatgcattgttcttatcaactgagctaagctca 5458131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Complemental strand, 19599208 - 19599146
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||  |||||| |||||||||||| |||||||||||| |||| |||||||| ||||||||    
T  19599208 cggggtttgaaccccggaccttgcatat-attatgcattgtccataccaactgagttaaactca 19599146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1080 - 1119
Target Start/End: Complemental strand, 20479917 - 20479879
Alignment:
Q  1080 ttttggtggtggcggggttcaaacccccgaccttgcatat 1119  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  20479917 ttttggtggtggcggg-ttcaaacccccgaccttgcatat 20479879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Original strand, 23198747 - 23198809
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||  |||||| ||| ||||||||| |||||||||||||||| |||||||| ||||||||    
T  23198747 cggggtttgaaccccggactttgcatatt-ttatgcattgttcataccaactgagttaaactca 23198809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1073 - 1155
Target Start/End: Original strand, 35142127 - 35142209
Alignment:
Q  1073 tattttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||| ||| |||||||| |||||||| |||| |  || |||||||| |||||||||||| ||||||||||||||||| ||||    
T  35142127 tattttttttgggtggtggtcggggttcgaacctcaaactttgcatat-attatgcattgtccatatcaactgagctaagctca 35142209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1075 - 1145
Target Start/End: Original strand, 36343515 - 36343586
Alignment:
Q  1075 ttttcttttggtggtggcggggt-tcaaacccccgaccttgcatattattatgcattgttcatatcaactga 1145  Q
    |||| |||| ||||||||||||  || |||||  ||||||||||||||||||||||||| |||| |||||||    
T  36343515 ttttttttttgtggtggcggggggtcgaaccctggaccttgcatattattatgcattgtccataccaactga 36343586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1080 - 1150
Target Start/End: Complemental strand, 36769227 - 36769156
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    ||||||||||| | ||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  36769227 ttttggtggtgtccggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 36769156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1111 - 1154
Target Start/End: Original strand, 37307891 - 37307933
Alignment:
Q  1111 cttgcatattattatgcattgttcatatcaactgagctaaactc 1154  Q
    ||||||||| |||||||||||||| |||||||||||||||||||    
T  37307891 cttgcatat-attatgcattgttcctatcaactgagctaaactc 37307933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1111 - 1150
Target Start/End: Original strand, 44473326 - 44473365
Alignment:
Q  1111 cttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  44473326 cttgcatattattatgcattgtccatatcaactaagctaa 44473365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1092 - 1143
Target Start/End: Original strand, 44651963 - 44652014
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaact 1143  Q
    |||||||| ||||| |||||||||||||  |||||||||||| |||||||||    
T  44651963 cggggttcgaacccgcgaccttgcatatatttatgcattgtttatatcaact 44652014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1120 - 1155
Target Start/End: Complemental strand, 45200229 - 45200194
Alignment:
Q  1120 tattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||| ||||||||||||||||||||||    
T  45200229 tattatgcattgtccatatcaactgagctaaactca 45200194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Complemental strand, 46987149 - 46987087
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||| |||||| |||||||||||| |||||||||||| | || |||||||||||| ||||    
T  46987149 cggggttcgaaccccggaccttgcatat-attatgcattgtccttaccaactgagctaagctca 46987087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1101 - 1155
Target Start/End: Original strand, 1285076 - 1285129
Alignment:
Q  1101 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||| || ||||||||| |||||||||||||| ||||||||||| ||||||||    
T  1285076 aaccccggatcttgcatat-attatgcattgttcctatcaactgagttaaactca 1285129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1101 - 1155
Target Start/End: Complemental strand, 7670488 - 7670435
Alignment:
Q  1101 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||| |||||||||||| ||||||||||||||| | |||||||||||| ||||    
T  7670488 aaccccggaccttgcatat-attatgcattgttcaaaccaactgagctaagctca 7670435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1080 - 1137
Target Start/End: Complemental strand, 8084503 - 8084446
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcata 1137  Q
    ||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||| ||||    
T  8084503 ttttggtggtggccggggttcgaaccccggaccttgcatatt-ttatgcattgtccata 8084446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1109 - 1155
Target Start/End: Complemental strand, 13955526 - 13955481
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||||| |||||||||||||||| |||||||||||| ||||    
T  13955526 accttgcatatt-ttatgcattgttcataccaactgagctaagctca 13955481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1080 - 1149
Target Start/End: Original strand, 27462421 - 27462490
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagcta 1149  Q
    |||| |||||||| ||||||  |||||| |||||||||||| |||||||||||| |||| |||||||||||    
T  27462421 tttttgtggtggccggggtttgaaccccggaccttgcatat-attatgcattgtccataccaactgagcta 27462490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1074 - 1159
Target Start/End: Original strand, 33610904 - 33610989
Alignment:
Q  1074 attttcttttggtggtggcggg-gttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaa 1159  Q
    ||||| |||| |||||||| || |||| ||| || |||||||||||| |||||||||||| | || |||||||||||| ||||||||    
T  33610904 attttttttttgtggtggccggtgttcgaactccggaccttgcatat-attatgcattgtccgtaacaactgagctaagctcatgaa 33610989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1092 - 1150
Target Start/End: Complemental strand, 36765562 - 36765504
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  36765562 cggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 36765504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1080 - 1145
Target Start/End: Complemental strand, 37235387 - 37235322
Alignment:
Q  1080 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactga 1145  Q
    |||||||||||| ||||||||||||  | |||||||||||| || ||||||||| ||||||||||||    
T  37235387 ttttggtggtggtcggggttcaaacttcagaccttgcatat-atcatgcattgtccatatcaactga 37235322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1109 - 1155
Target Start/End: Complemental strand, 38728255 - 38728209
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  38728255 accttgcatatttttatgcattgtccataccaactgagctaagctca 38728209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1092 - 1150
Target Start/End: Original strand, 40036103 - 40036161
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  40036103 cggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 40036161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1101 - 1155
Target Start/End: Original strand, 43539111 - 43539164
Alignment:
Q  1101 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||| |||||| ||||| |||||||||||||| ||||||||||||||| ||||    
T  43539111 aaccccggaccttacatat-attatgcattgttcctatcaactgagctaagctca 43539164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1092 - 1150
Target Start/End: Complemental strand, 47840721 - 47840663
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||||||||| |||||||||||||  |||| ||||||  ||||||| ||||||||    
T  47840721 cggggttcaaacccgcgaccttgcatatatttatacattgtctatatcaattgagctaa 47840663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1082 - 1150
Target Start/End: Complemental strand, 3671898 - 3671830
Alignment:
Q  1082 ttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||||| |||||||  ||| || |||||||||||| ||||||||||||||||| | ||||||||||    
T  3671898 ttggtggtggtcggggtttgaactccagaccttgcatat-attatgcattgttcataccgactgagctaa 3671830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1067 - 1155
Target Start/End: Complemental strand, 21105692 - 21105604
Alignment:
Q  1067 atgatatattttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||| |||| |||| ||||||| |||||||| |||| |  ||||||||||| |||||||||| | |||| |||||||||||| ||||    
T  21105692 atgatattttttttttttgtggtggtcggggttcgaacctcgaaccttgcatat-attatgcattttccataccaactgagctaagctca 21105604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1075 - 1148
Target Start/End: Original strand, 24099216 - 24099288
Alignment:
Q  1075 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagct 1148  Q
    |||| |||| |||||||  |||||||||||||  ||||| ||||| ||||||||||||| ||||||| ||||||    
T  24099216 ttttatttttgtggtggtcgggttcaaaccccgaaccttacatat-attatgcattgtttatatcaattgagct 24099288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1101 - 1150
Target Start/End: Original strand, 39280825 - 39280873
Alignment:
Q  1101 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||| |||||||||||| |||||||||||||| || ||||||||||||    
T  39280825 aaccccggaccttgcatat-attatgcattgttcttaccaactgagctaa 39280873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 8e-21; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 1080 - 1167
Target Start/End: Original strand, 37749984 - 37750071
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaaaactttta 1167  Q
    ||||| ||||||| |||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||| || ||||||||    
T  37749984 ttttgatggtggccggggttcaaaccccggactttgcatat-attatgcattgttcatatcaactgagctaaactcacgagaactttta 37750071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1075 - 1150
Target Start/End: Original strand, 9663034 - 9663109
Alignment:
Q  1075 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||| ||| ||||||||| | |||| ||| ||||||||| |||||||||||||||||| |||| ||||||||||||    
T  9663034 ttttttttgggtggtggctgagttcgaactcccgaccttacatattattatgcattgtccataccaactgagctaa 9663109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1108 - 1158
Target Start/End: Complemental strand, 29652265 - 29652216
Alignment:
Q  1108 gaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 1158  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  29652265 gaccttgcatat-attatgcattgttcttatcaactgagctaaactcatga 29652216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Complemental strand, 39433491 - 39433411
Alignment:
Q  1075 ttttcttttggtggtggcggg-gttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| |||||||| || |||| |||||| ||||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  39433491 ttttttttttgtggtggccggcgttcgaaccccagaccttgcatatt-ttatgtattgttcatatcaactgagctaagctca 39433411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 33451330 - 33451409
Alignment:
Q  1075 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| |||||||| ||||||||||||  ||||||||||| ||||||||||| | |||| |||||||||||| ||||    
T  33451330 ttttttttttgtggtggcagggttcaaacccttgaccttgcata-tattatgcattatccataccaactgagctaagctca 33451409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1080 - 1153
Target Start/End: Original strand, 19260564 - 19260637
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 1153  Q
    ||||||||||||| ||||||  |||||| |||||| ||||| |||||||||||| |||||||||| |||||||||    
T  19260564 ttttggtggtggccggggtttgaaccccggaccttacatat-attatgcattgtacatatcaactaagctaaact 19260637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1092 - 1138
Target Start/End: Original strand, 34645083 - 34645129
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatat 1138  Q
    |||||||| |||||| ||||||||||||||||||||||||| |||||    
T  34645083 cggggttcgaaccccggaccttgcatattattatgcattgtccatat 34645129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Complemental strand, 23852992 - 23852912
Alignment:
Q  1075 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||||||||||| |||| |||||||| | |||||||||||| |||||||||||| |||| | |||||||||| ||||    
T  23852992 tttttttttggtggtgggcgggattcaaaccacggaccttgcatat-attatgcattgtccataccgactgagctaagctca 23852912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1101 - 1150
Target Start/End: Complemental strand, 24195303 - 24195255
Alignment:
Q  1101 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||| |||||||||||| |||||| |||||||||||||||||||||||    
T  24195303 aaccccggaccttgcatat-attatgtattgttcatatcaactgagctaa 24195255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1109 - 1158
Target Start/End: Original strand, 26991772 - 26991820
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaaactcatga 1158  Q
    ||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  26991772 accttgcatat-attatgcattgtccatatcaactgagccaaactcatga 26991820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1092 - 1153
Target Start/End: Complemental strand, 39525442 - 39525381
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 1153  Q
    |||||||| ||||| |||||||||||||  |||| ||||||  |||||||||||||||||||    
T  39525442 cggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaaact 39525381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1122 - 1158
Target Start/End: Original strand, 20665704 - 20665740
Alignment:
Q  1122 ttatgcattgttcatatcaactgagctaaactcatga 1158  Q
    ||||||||||||| |||||||||||||||||||||||    
T  20665704 ttatgcattgttcctatcaactgagctaaactcatga 20665740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Complemental strand, 30218279 - 30218204
Alignment:
Q  1080 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||| | ||||||| |||| || ||| |||||||| |||||||||||||||||||||||||  ||||||||    
T  30218279 ttttggtggttgtcggggtttaaactccggacattgcatat-attatgcattgttcatatcaactgaattaaactca 30218204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1107 - 1151
Target Start/End: Original strand, 44068005 - 44068049
Alignment:
Q  1107 cgaccttgcatattattatgcattgttcatatcaactgagctaaa 1151  Q
    |||||||||||||| ||||||||||| || |||||||||||||||    
T  44068005 cgaccttgcatatttttatgcattgtccacatcaactgagctaaa 44068049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Complemental strand, 1921784 - 1921721
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||| |||||| ||||||||||||  |||||||||||   |||||||| |||||||||||    
T  1921784 cggggttcgaaccccggaccttgcatatatttatgcattgtcgctatcaacttagctaaactca 1921721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1120 - 1159
Target Start/End: Original strand, 13284290 - 13284329
Alignment:
Q  1120 tattatgcattgttcatatcaactgagctaaactcatgaa 1159  Q
    |||||| |||||||||||||||||||| ||||||||||||    
T  13284290 tattatacattgttcatatcaactgagttaaactcatgaa 13284329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1078 - 1132
Target Start/End: Complemental strand, 22975881 - 22975826
Alignment:
Q  1078 tcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgt 1132  Q
    ||||||||||||||| |||||| ||||||| ||||||||||||  |||||||||||    
T  22975881 tcttttggtggtggctggggtttaaaccccagaccttgcatatatttatgcattgt 22975826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1096 - 1155
Target Start/End: Original strand, 26885640 - 26885698
Alignment:
Q  1096 gttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||||| || ||| |||||| |||||||||||||||| |||||||||||||||||    
T  26885640 gttcgaaccccggatcttacatatt-ttatgcattgttcataccaactgagctaaactca 26885698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1108 - 1155
Target Start/End: Original strand, 27718908 - 27718954
Alignment:
Q  1108 gaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  27718908 gaccttgcatat-attatgcattgtccatatcaactgagctaagctca 27718954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Complemental strand, 30623356 - 30623294
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||| |||||| |||||||||||| |||||||||||| | || |||||||||||| ||||    
T  30623356 cggggttcgaaccccagaccttgcatat-attatgcattgtccttaccaactgagctaagctca 30623294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1081 - 1155
Target Start/End: Original strand, 32051518 - 32051592
Alignment:
Q  1081 tttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||||| ||||||  |||||| |||||||||||| |||||||||||| || | |||||||||||| ||||    
T  32051518 tttggtggtggccggggtttgaaccccggaccttgcatat-attatgcattgtccaaaccaactgagctaagctca 32051592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Complemental strand, 34997522 - 34997459
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||| |||||  ||||||||||||  |||||||||||  |||||||||||||||| ||||    
T  34997522 cggggttcgaacccatgaccttgcatatatttatgcattgtctatatcaactgagctaagctca 34997459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1116 - 1155
Target Start/End: Original strand, 35372119 - 35372158
Alignment:
Q  1116 atattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  35372119 atattattatgcattgtccttatcaactgagctaaactca 35372158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1080 - 1150
Target Start/End: Original strand, 36059346 - 36059417
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    ||||||||||| | ||||||| ||||| |||||||||||||  | |||||||||  ||||||||||||||||    
T  36059346 ttttggtggtgtccggggttcgaaccctcgaccttgcatatattgatgcattgtctatatcaactgagctaa 36059417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1080 - 1150
Target Start/End: Complemental strand, 38139315 - 38139244
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    ||||||||||| | ||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  38139315 ttttggtggtgtccggggttcgaacccacgaccttgcatatatttatacattgtctatatcaactgagctaa 38139244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1093 - 1155
Target Start/End: Original strand, 1764953 - 1765014
Alignment:
Q  1093 ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||| |||||| || |||||||||| |||||| |||||||||||||||||| ||| ||||    
T  1764953 ggggttcgaaccccggatcttgcatatt-ttatgcgttgttcatatcaactgagttaagctca 1765014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1101 - 1155
Target Start/End: Original strand, 2554219 - 2554272
Alignment:
Q  1101 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||| ||||||||||||| ||||| ||||| ||||||||||||||||| ||||    
T  2554219 aaccccagaccttgcatatt-ttatgtattgtccatatcaactgagctaagctca 2554272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1109 - 1155
Target Start/End: Original strand, 8717490 - 8717535
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||||    
T  8717490 accttgcatat-attatgcattgtccataccaactgagctaaactca 8717535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1092 - 1146
Target Start/End: Complemental strand, 11053039 - 11052986
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 1146  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||||  |||||||    
T  11053039 cggggttcaaaccccggaccttgcata-tattatgcattgtccatactaactgag 11052986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1092 - 1150
Target Start/End: Original strand, 38137802 - 38137860
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  38137802 cggggttcgaacccacgaccttgcatatatttatacattgtctatatcaactgagctaa 38137860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1104 - 1150
Target Start/End: Complemental strand, 44087290 - 44087244
Alignment:
Q  1104 ccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    ||||||||||||||||| ||||||||||| |||| |||||| |||||    
T  44087290 ccccgaccttgcatatttttatgcattgtacataccaactgggctaa 44087244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Complemental strand, 7997020 - 7996941
Alignment:
Q  1075 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||| |||||| |||||||  |||||| |||||||||||| ||||||| |||| |||| |||||||||||| ||||    
T  7997020 ttttcttttg-tggtggtcggggtttgaaccccagaccttgcatat-attatgcgttgtccataccaactgagctaagctca 7996941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1093 - 1158
Target Start/End: Original strand, 9655996 - 9656060
Alignment:
Q  1093 ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 1158  Q
    ||||||| |||| | ||||||||||||| ||||||||||| | || |||||||||||| |||||||    
T  9655996 ggggttcgaacctcggaccttgcatatt-ttatgcattgtccttaccaactgagctaagctcatga 9656060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1080 - 1144
Target Start/End: Complemental strand, 12748977 - 12748913
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactg 1144  Q
    ||||||||||||| ||||||  |||||| |||||||||||| |||||||||||| |||| ||||||    
T  12748977 ttttggtggtggccggggtttgaaccccggaccttgcatat-attatgcattgtccataccaactg 12748913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Complemental strand, 13577157 - 13577077
Alignment:
Q  1075 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| ||||||| |||||||||| | || |||||||||||| |||||||||||| |||| |||||||| ||| ||||    
T  13577157 ttttttttttgtggtggtcggggttcaa-ctccagaccttgcatatgattatgcattgtccataccaactgagttaagctca 13577077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 19163516 - 19163596
Alignment:
Q  1075 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| ||||||| |||||||  |||||| |||||||||||  |||||||||||| |||| |||||||||||| ||||    
T  19163516 ttttttttttgtggtggtcggggtttgaaccccggaccttgcataa-attatgcattgtccataccaactgagctaagctca 19163596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1085 - 1150
Target Start/End: Complemental strand, 32192964 - 32192900
Alignment:
Q  1085 gtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||| |||||||| ||||||  ||||||||||| |||||||||||| |||| ||||| ||||||    
T  32192964 gtggtgtcggggttcgaaccccgaaccttgcatat-attatgcattgtccataccaactaagctaa 32192900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1108 - 1153
Target Start/End: Original strand, 40919373 - 40919417
Alignment:
Q  1108 gaccttgcatattattatgcattgttcatatcaactgagctaaact 1153  Q
    |||||||||||| |||||||||||||| || |||||||||||||||    
T  40919373 gaccttgcatat-attatgcattgttcctaccaactgagctaaact 40919417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1122 - 1155
Target Start/End: Original strand, 44215816 - 44215849
Alignment:
Q  1122 ttatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||| ||||||||||||||||||||    
T  44215816 ttatgcattgttcctatcaactgagctaaactca 44215849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0743 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 1399 - 1479
Alignment:
Q  1075 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||||| |||| |||||| ||||| ||||    
T  1399 tttttttttggtggtggcggggttcgaaccccagacgttgcatattattatgcattgtccataccaactgtgctaagctca 1479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 3e-17; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 1092 - 1158
Target Start/End: Original strand, 19595476 - 19595542
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 1158  Q
    |||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||||||||    
T  19595476 cggggttcgaaccccagaccttgcatattattatgcatggttcataccaactgagttaaactcatga 19595542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Complemental strand, 19976235 - 19976154
Alignment:
Q  1075 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| ||||||| || ||||| |||||| ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  19976235 ttttttttttgtggtggtcgaggttcgaaccccggaccttgcatattattatgcattgtccataccaactgagctaaactca 19976154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1080 - 1158
Target Start/End: Original strand, 16221331 - 16221409
Alignment:
Q  1080 ttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 1158  Q
    |||| |||||||||||| ||| ||||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  16221331 tttttgtggtggcggggattcgaaccccgaaccttgcatatt-ttatgcattgttcataccaactgagctaaactcatga 16221409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 25186222 - 25186302
Alignment:
Q  1075 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| |||||||| ||||||  |||||| |||||||||||| |||||||||||| ||||||||||||||||||||||    
T  25186222 ttttttttttgtggtggctggggtttgaaccccggaccttgcatat-attatgcattgtccatatcaactgagctaaactca 25186302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1094 - 1158
Target Start/End: Original strand, 17280948 - 17281011
Alignment:
Q  1094 gggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 1158  Q
    |||||||||||||  ||||||||||| ||||| |||| ||||||||||||||||||| |||||||    
T  17280948 gggttcaaaccccgcaccttgcatat-attatacattattcatatcaactgagctaagctcatga 17281011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Original strand, 21482504 - 21482579
Alignment:
Q  1080 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||||| ||||||||||||||| ||||||||||| |||||| |||| | | || |||||||||||||||||    
T  21482504 ttttggtggtggtcggggttcaaaccccggaccttgcata-tattatacattatccttaccaactgagctaaactca 21482579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1072 - 1143
Target Start/End: Original strand, 21870872 - 21870944
Alignment:
Q  1072 atattttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaact 1143  Q
    ||||||| |||| ||||||| |||||||| ||||||  |||||||||||||||||||||||| |||| |||||    
T  21870872 atattttttttttgtggtggtcggggttcgaaccccgaaccttgcatattattatgcattgtccataccaact 21870944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Complemental strand, 27411168 - 27411093
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||| ||||||| |||||| |||||||||||| ||||||||  || ||||||||||||||||| ||||    
T  27411168 ttttggtggtggccggggttcgaaccccggaccttgcatat-attatgcaaggtccatatcaactgagctaagctca 27411093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Complemental strand, 33064062 - 33063987
Alignment:
Q  1080 ttttggtggtggcggg-gttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||| || |||| ||| || |||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  33064062 ttttggtggtggccggagttcgaactccggaccttgcatat-attatgcattgtccatatcaactgagctaagctca 33063987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1108 - 1155
Target Start/End: Complemental strand, 29734738 - 29734692
Alignment:
Q  1108 gaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||    
T  29734738 gaccttgcatat-attatgcattgtccatatcaactgagctaaactca 29734692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Complemental strand, 39761500 - 39761439
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||||  |||||||||||| |||||||||||| | ||||||||||||||||||||    
T  39761500 cggggttcaaaccca-gaccttgcatat-attatgcattgtccttatcaactgagctaaactca 39761439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1081 - 1155
Target Start/End: Complemental strand, 42066787 - 42066713
Alignment:
Q  1081 tttggtggtggcgg-ggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||||| | |||||||||||| ||||||||||| |||| |||||||| |||| |||||||||||| ||||    
T  42066787 tttggtggtggccgaggttcaaaccccggaccttgcata-tattgtgcattgtccataccaactgagctaagctca 42066713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1074 - 1155
Target Start/End: Complemental strand, 2257053 - 2256972
Alignment:
Q  1074 attttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||| |||| |||||||| ||||||| |||||| |||||||||||| |||||||||||| |||| |||||||| ||| ||||    
T  2257053 attttttttttgtggtggccggggttcgaaccccagaccttgcatat-attatgcattgtccataccaactgagttaagctca 2256972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1074 - 1155
Target Start/End: Complemental strand, 7052856 - 7052774
Alignment:
Q  1074 attttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||| ||||||||||| | ||||||  | |||| ||||||||||||||||||||||||| | || |||||||||||| ||||    
T  7052856 atttttttttggtggtgtccggggtttgagccccggaccttgcatattattatgcattgtccttaccaactgagctaagctca 7052774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1080 - 1158
Target Start/End: Complemental strand, 16439424 - 16439346
Alignment:
Q  1080 ttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 1158  Q
    |||| ||||||||||||||| || || |||||||| |||||||||| || |||  ||| |||||||||||| |||||||    
T  16439424 tttttgtggtggcggggttcgaatccacgaccttgaatattattatacactgtctataccaactgagctaagctcatga 16439346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1088 - 1158
Target Start/End: Complemental strand, 25626087 - 25626018
Alignment:
Q  1088 gtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 1158  Q
    |||||||||||| ||||| ||| ||||||||| |||||||| ||| ||||| |||| ||||||||||||||    
T  25626087 gtggcggggttcgaaccctcgagcttgcatat-attatgcaatgtccatataaactaagctaaactcatga 25626018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1080 - 1153
Target Start/End: Original strand, 29133469 - 29133542
Alignment:
Q  1080 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 1153  Q
    |||| ||||||| |||||||| |||||  || |||||||||| |||||||||||||||| |||||||||||||||    
T  29133469 tttttgtggtggtcggggttcgaaccctagatcttgcatatt-ttatgcattgttcataccaactgagctaaact 29133542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1093 - 1155
Target Start/End: Original strand, 39068707 - 39068768
Alignment:
Q  1093 ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||||||| || ||||||||| |||||||||||| | ||||||||||||||| ||||    
T  39068707 ggggttcaaaccccggatcttgcatat-attatgcattgtccttatcaactgagctaagctca 39068768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 9383189 - 9383269
Alignment:
Q  1075 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| |||||||| |||||| |||||||  ||||||||||| |||||||||||| |||| |||||||||||| ||||    
T  9383189 ttttttttttgtggtggcaggggttgaaaccccaaaccttgcatat-attatgcattgtccataccaactgagctaagctca 9383269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1094 - 1156
Target Start/End: Complemental strand, 13143169 - 13143104
Alignment:
Q  1094 gggttcaaacccccgaccttgcatattattatgca----ttgttcatatcaactgagctaaactcat 1156  Q
    ||||||||||||||||||||||||| |||||||||    ||||||||| ||||||| ||||||||||    
T  13143169 gggttcaaacccccgaccttgcata-tattatgcattgtttgttcataccaactgaactaaactcat 13143104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1110 - 1155
Target Start/End: Original strand, 37119274 - 37119318
Alignment:
Q  1110 ccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||    
T  37119274 ccttgcatat-attatgcattgttcatatcaactgagttaaactca 37119318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1122 - 1158
Target Start/End: Complemental strand, 3708413 - 3708377
Alignment:
Q  1122 ttatgcattgttcatatcaactgagctaaactcatga 1158  Q
    ||||||||||||| |||||||||||||||||||||||    
T  3708413 ttatgcattgttcctatcaactgagctaaactcatga 3708377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1122 - 1158
Target Start/End: Original strand, 11869003 - 11869039
Alignment:
Q  1122 ttatgcattgttcatatcaactgagctaaactcatga 1158  Q
    ||||||||||||| |||||||||||||||||||||||    
T  11869003 ttatgcattgttcctatcaactgagctaaactcatga 11869039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1095 - 1155
Target Start/End: Complemental strand, 12124605 - 12124546
Alignment:
Q  1095 ggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||| |||||| |||||||||||| |||||||||||| | || |||||||||||||||||    
T  12124605 ggttcgaaccccggaccttgcatat-attatgcattgtccttaccaactgagctaaactca 12124546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1122 - 1158
Target Start/End: Original strand, 35360396 - 35360432
Alignment:
Q  1122 ttatgcattgttcatatcaactgagctaaactcatga 1158  Q
    ||||||||||||| |||||||||||||||||||||||    
T  35360396 ttatgcattgttcctatcaactgagctaaactcatga 35360432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1080 - 1150
Target Start/End: Complemental strand, 6765686 - 6765616
Alignment:
Q  1080 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||||||| || ||||| |||||| |||||| |||||| ||||||||||| |||| ||||||||||||    
T  6765686 ttttggtggtggtcgtggttcgaaccccggaccttacatatt-ttatgcattgtccataccaactgagctaa 6765616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Complemental strand, 7201582 - 7201508
Alignment:
Q  1080 ttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||  |||||| ||| || ||| |||||||| ||||||||||||||| | |||||||||||| ||||    
T  7201582 ttttggtggtggtcgggttcgaactccagactttgcatat-attatgcattgttcaaaccaactgagctaagctca 7201508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Original strand, 15654855 - 15654929
Alignment:
Q  1080 ttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||| | |||||| |||||| ||||||||||||| ||||||||| | | || |||||||||||| ||||    
T  15654855 ttttggtggtgtccgggttcgaaccccagaccttgcatatt-ttatgcattatccttaccaactgagctaagctca 15654929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1120 - 1155
Target Start/End: Complemental strand, 19967454 - 19967419
Alignment:
Q  1120 tattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||||||||||||||||||||| ||||    
T  19967454 tattatgcattgttcatatcaactgagctaagctca 19967419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1108 - 1155
Target Start/End: Complemental strand, 23718982 - 23718936
Alignment:
Q  1108 gaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  23718982 gaccttgcatatt-ttatgcgttgttcaaatcaactgagctaaactca 23718936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1108 - 1155
Target Start/End: Complemental strand, 24106654 - 24106608
Alignment:
Q  1108 gaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  24106654 gaccttgcatatt-ttatgcgttgttcaaatcaactgagctaaactca 24106608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1080 - 1150
Target Start/End: Original strand, 24592831 - 24592901
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    ||||||||||||| ||||||  |||||| |||||||||||| |||||||||||| | || ||||||||||||    
T  24592831 ttttggtggtggccggggtttgaaccccagaccttgcatat-attatgcattgtccctaccaactgagctaa 24592901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1075 - 1149
Target Start/End: Original strand, 41778924 - 41778998
Alignment:
Q  1075 ttttcttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagcta 1149  Q
    |||| ||||||||||||| ||| ||| |||| | |||||||||||| |||||||||||| || |||||||||||||    
T  41778924 tttttttttggtggtggccgggattcgaacctcggaccttgcatat-attatgcattgtccaaatcaactgagcta 41778998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Complemental strand, 41859915 - 41859853
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||  |||||| ||||||||||||| ||||||||||| |||| |||||||| ||||||||    
T  41859915 cggggtttgaaccccagaccttgcatatt-ttatgcattgtccataccaactgagttaaactca 41859853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1092 - 1158
Target Start/End: Original strand, 11817343 - 11817409
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 1158  Q
    |||||||| ||||||  ||||| ||||||||||| |||||| |||| |||||||| ||| |||||||    
T  11817343 cggggttcgaacccctaaccttacatattattatacattgtccataccaactgagttaagctcatga 11817409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1092 - 1150
Target Start/End: Original strand, 25274827 - 25274884
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||| |||||| |||||| ||||| |||||||||||||| || ||||||||||||    
T  25274827 cggggttcgaaccccagaccttacatat-attatgcattgttcttaccaactgagctaa 25274884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1088 - 1150
Target Start/End: Original strand, 25598556 - 25598617
Alignment:
Q  1088 gtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    ||||| |||||| |||||  |||||||||||| |||||||||||| |||| ||||||||||||    
T  25598556 gtggccgggttcgaaccctggaccttgcatat-attatgcattgtccataccaactgagctaa 25598617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1104 - 1158
Target Start/End: Complemental strand, 30956480 - 30956427
Alignment:
Q  1104 ccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 1158  Q
    |||| ||||||||||| || |||||||||||||| |||||||||||| |||||||    
T  30956480 ccccaaccttgcatataat-atgcattgttcataccaactgagctaagctcatga 30956427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1070 - 1155
Target Start/End: Original strand, 35287639 - 35287724
Alignment:
Q  1070 atatattttcttttggtggtggcggg-gttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||| |||| ||||||||  | ||| ||||||| |||||||||| | |||||||||||| | |||||||||||| |||||||    
T  35287639 atatattttttttttgtggtggccagagtttaaaccccggaccttgcatct-attatgcattgtccctatcaactgagccaaactca 35287724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1074 - 1155
Target Start/End: Original strand, 41187436 - 41187517
Alignment:
Q  1074 attttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||| |||||| | ||||||| |||||| ||| ||||||||| ||||||||||| |||| ||||| |||||| ||||    
T  41187436 attttctttttgtggtgaccggggttcgaaccccggactttgcatatt-ttatgcattgtccataccaactaagctaagctca 41187517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1092 - 1150
Target Start/End: Complemental strand, 45474713 - 45474655
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  45474713 cggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 45474655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1075 - 1132
Target Start/End: Complemental strand, 5676819 - 5676763
Alignment:
Q  1075 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgt 1132  Q
    |||| |||||||||||||||||||  |||||||  ||||||||| |||||||||||||    
T  5676819 tttttttttggtggtggcggggtttgaacccccacccttgcata-tattatgcattgt 5676763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1101 - 1158
Target Start/End: Original strand, 18782547 - 18782603
Alignment:
Q  1101 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 1158  Q
    |||||| |||||||||||| |||||||||||||  || ||||| ||||||||||||||    
T  18782547 aaccccagaccttgcatat-attatgcattgtttctaccaacttagctaaactcatga 18782603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1109 - 1146
Target Start/End: Complemental strand, 19159987 - 19159951
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgag 1146  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  19159987 accttgcatat-attatgcattgttcatatcaactgag 19159951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Complemental strand, 20455972 - 20455892
Alignment:
Q  1075 ttttcttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| |||||||| ||| ||| |||||| |||||||||||| |||||||||||| |||| ||| |||||||| ||||    
T  20455972 ttttttttttgtggtggccgggattcgaaccccggaccttgcatat-attatgcattgtccataccaattgagctaagctca 20455892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1094 - 1155
Target Start/End: Complemental strand, 24593437 - 24593377
Alignment:
Q  1094 gggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||| |||||| |||||||||||| |||||||||||| | || |||||||||||| ||||    
T  24593437 gggttcgaaccccggaccttgcatat-attatgcattgtccttaccaactgagctaagctca 24593377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1101 - 1150
Target Start/End: Complemental strand, 36474816 - 36474768
Alignment:
Q  1101 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||| ||||||||||||| ||||||||||| | |||||||||||||||    
T  36474816 aaccccggaccttgcatatt-ttatgcattgtccctatcaactgagctaa 36474768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1093 - 1150
Target Start/End: Complemental strand, 37522686 - 37522629
Alignment:
Q  1093 ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    ||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  37522686 ggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 37522629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 5e-16; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 1084 - 1155
Target Start/End: Original strand, 24752636 - 24752708
Alignment:
Q  1084 ggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||||| |||| |||||||||||| ||||    
T  24752636 ggtggtggccggggttcgaaccccagaccttgcatattattatgcattgtccataccaactgagctaagctca 24752708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Original strand, 14907021 - 14907096
Alignment:
Q  1080 ttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||||| ||||||||||| ||| |||| ||| ||||    
T  14907021 ttttggtggtggtggggttcgaacccccgaccttacatattattatacattgttcataccaattgagttaagctca 14907096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1070 - 1146
Target Start/End: Original strand, 5552977 - 5553052
Alignment:
Q  1070 atatattttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 1146  Q
    ||||||||| |||| ||||||||||||||| ||  ||||||||| |||| |||||| ||||||||||||||||||||    
T  5552977 atatattttttttttgtggtggcggggttcgaattcccgaccttacata-tattatacattgttcatatcaactgag 5553052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Complemental strand, 7158849 - 7158774
Alignment:
Q  1080 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||||| ||||| |||||| || ||||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  7158849 ttttggtggtggtcggggctcaaactccggaccttgcatatt-ttatgcattgtccatatcaactgggctaaactca 7158774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Complemental strand, 42888651 - 42888576
Alignment:
Q  1080 ttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||||||| ||| |||||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  42888651 ttttggtggtggcgggggttcgaaccccggaccttgcatatt-ttatgcattgtccataccaactgagctaagctca 42888576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1109 - 1155
Target Start/End: Original strand, 3393583 - 3393628
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  3393583 accttgcatat-attatgcattgttcatatcaactgagctaaactca 3393628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 52441491 - 52441571
Alignment:
Q  1075 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||| ||||||||| ||||||||||| || ||||||||||| |||||||||||||  ||| |||||||||||| ||||    
T  52441491 ttttctttgggtggtggccggggttcaaacgccggaccttgcata-tattatgcattgtctataccaactgagctaagctca 52441571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Original strand, 34521175 - 34521250
Alignment:
Q  1080 ttttggtggtggcgg-ggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||| | ||||  |||||| |||||||||||| |||||||||||| |||| |||||||||||||||||    
T  34521175 ttttggtggtggccgaggtttgaaccccggaccttgcatat-attatgcattgtccataccaactgagctaaactca 34521250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Complemental strand, 39452537 - 39452461
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||||||| ||||||  || ||| ||||||||||||| |||||||||||||||| |||||||||||| ||||    
T  39452537 tttttgtggtggccggggtttgaatcccagaccttgcatatttttatgcattgttcataccaactgagctaagctca 39452461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Complemental strand, 20006134 - 20006071
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||||||||  ||| |||||||||||||||||||| ||| ||||||||| ||| ||||    
T  20006134 cggggttcaaaccccgaaccctgcatattattatgcattgtccatgtcaactgagttaatctca 20006071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Original strand, 21965889 - 21965952
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||| |||||| ||||||| ||||  ||||||||| ||||||||||||||||||| ||||    
T  21965889 cggggttcgaaccccggaccttgtatatatttatgcattattcatatcaactgagctaagctca 21965952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1080 - 1146
Target Start/End: Complemental strand, 45774651 - 45774584
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 1146  Q
    |||| |||||||| ||||||| |||||| ||||||||||||||||||| |||||| ||| ||||||||    
T  45774651 tttttgtggtggctggggttcgaaccccggaccttgcatattattatgtattgtttataccaactgag 45774584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1108 - 1150
Target Start/End: Original strand, 15549250 - 15549292
Alignment:
Q  1108 gaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  15549250 gaccttgcatattattatgcattgtctatatcaactgagctaa 15549292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1093 - 1155
Target Start/End: Original strand, 29233973 - 29234034
Alignment:
Q  1093 ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||| |||||| ||||||||||||| |||||||||||  ||| |||||||||||||||||    
T  29233973 ggggttcgaaccccagaccttgcatatt-ttatgcattgtctataccaactgagctaaactca 29234034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1080 - 1153
Target Start/End: Original strand, 39879210 - 39879284
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 1153  Q
    ||||||||||| | ||||||| ||||| |||||||||||||  |||| ||||||  |||||||||||||||||||    
T  39879210 ttttggtggtgtctggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaaact 39879284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1101 - 1155
Target Start/End: Complemental strand, 44641581 - 44641528
Alignment:
Q  1101 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||| | |||||||||| |||||||||||| ||||||||||||||||||||||    
T  44641581 aaccccgggccttgcatat-attatgcattgtccatatcaactgagctaaactca 44641528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1108 - 1162
Target Start/End: Complemental strand, 45701375 - 45701322
Alignment:
Q  1108 gaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaaaac 1162  Q
    |||||| |||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  45701375 gaccttacatatt-ttatgcattgttcataccaactgagctaaactcacgaaaac 45701322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1102 - 1155
Target Start/End: Original strand, 925434 - 925487
Alignment:
Q  1102 acccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||| |||| ||||    
T  925434 accccggaccttgcatatttttatgcattgtccatatcaactgaactaagctca 925487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Complemental strand, 32944817 - 32944737
Alignment:
Q  1075 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||||||||||| |||||||| |||||| ||| |||||||| |||||||||||| |||| ||||| |||||| ||||    
T  32944817 tttttttttggtggtggtcggggttcgaaccccagacgttgcatat-attatgcattgtccataccaactaagctaagctca 32944737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1080 - 1156
Target Start/End: Complemental strand, 40227905 - 40227829
Alignment:
Q  1080 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcat 1156  Q
    |||| ||||||| |||||||| |||||| ||||||| ||||| ||||||||||| |||| |||||||||||| |||||    
T  40227905 tttttgtggtggtcggggttcgaaccccagaccttgtatatt-ttatgcattgtccataccaactgagctaagctcat 40227829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 42045352 - 42045432
Alignment:
Q  1075 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| ||||||||||||| ||||||  ||| || |||||||||||| |||||||||||| |||| |||||||||||| ||||    
T  42045352 tttttttttggtggtggccggggtttgaactccagaccttgcatat-attatgcattgtccataccaactgagctaagctca 42045432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1080 - 1124
Target Start/End: Original strand, 2684422 - 2684466
Alignment:
Q  1080 ttttggtggtggcggggttcaaacccccgaccttgcatattatta 1124  Q
    |||| ||||||||||||||| |||| |||||||||||||||||||    
T  2684422 tttttgtggtggcggggttcgaacctccgaccttgcatattatta 2684466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1075 - 1150
Target Start/End: Original strand, 3509921 - 3509996
Alignment:
Q  1075 ttttcttttggtggtggcggggttcaaacccccg-accttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||| ||||||||||||| | |||  |||||||| ||||||||||| |||||||||||| |||| ||||||||||||    
T  3509921 tttttttttggtggtggccgagtttgaacccccggaccttgcatat-attatgcattgtccataccaactgagctaa 3509996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Complemental strand, 7550959 - 7550897
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||| || ||| ||||||| ||||| ||||||||||||||||||||||||| ||| ||||    
T  7550959 cggggttcgaatcccggaccttgtatatt-ttatgcattgttcatatcaactgagttaagctca 7550897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Original strand, 21400009 - 21400083
Alignment:
Q  1080 ttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||| | |||||| |||||  ||||||||||| ||||||||||||| | || |||||||||||| ||||    
T  21400009 ttttggtggtgtcagggttcgaacccaagaccttgcata-tattatgcattgtccctaccaactgagctaagctca 21400083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1092 - 1163
Target Start/End: Complemental strand, 23203385 - 23203315
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaaaact 1163  Q
    |||||||  ||||||  |||||||||||| |||||||||||||  | |||||||||||| ||||||||||||    
T  23203385 cggggtttgaaccccgaaccttgcatatt-ttatgcattgttccaaccaactgagctaagctcatgaaaact 23203315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1090 - 1145
Target Start/End: Original strand, 28053236 - 28053291
Alignment:
Q  1090 ggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactga 1145  Q
    ||||| |||| ||||| ||||||| |||||||||||||||||| |||| |||||||    
T  28053236 ggcggagttcgaaccctcgaccttacatattattatgcattgtccataccaactga 28053291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1101 - 1155
Target Start/End: Complemental strand, 12214047 - 12213994
Alignment:
Q  1101 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||| |||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  12214047 aaccccagaccttgcatat-attatgtattgttcctatcaactgagctaagctca 12213994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1096 - 1158
Target Start/End: Original strand, 13778814 - 13778876
Alignment:
Q  1096 gttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 1158  Q
    |||| |||||| ||||||  |||||||||||||| || |||||||||| |||||| |||||||    
T  13778814 gttcgaaccccggaccttatatattattatgcatcgtccatatcaactaagctaagctcatga 13778876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1109 - 1155
Target Start/End: Original strand, 17917153 - 17917198
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||||||    
T  17917153 accttacatatt-ttatgcattgtccatatcaactgagctaaactca 17917198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1101 - 1155
Target Start/End: Complemental strand, 26755670 - 26755617
Alignment:
Q  1101 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||| |||||||||||| || ||||||||| ||||||||||||||||| ||||    
T  26755670 aaccccggaccttgcatat-ataatgcattgtccatatcaactgagctaagctca 26755617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1109 - 1155
Target Start/End: Original strand, 29450996 - 29451042
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||||||||||||||||| |||| |||||||| ||| ||||    
T  29450996 accttgcatattattatgcattgtccataccaactgagttaagctca 29451042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1108 - 1150
Target Start/End: Complemental strand, 40021418 - 40021376
Alignment:
Q  1108 gaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||    
T  40021418 gaccttgtatattattatgcattgtccataccaactgagctaa 40021376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1101 - 1155
Target Start/End: Original strand, 48646732 - 48646786
Alignment:
Q  1101 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||| ||||||||||||||||||||||||| ||||  ||||||| ||| ||||    
T  48646732 aaccccggaccttgcatattattatgcattgtccatacaaactgagttaagctca 48646786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1109 - 1155
Target Start/End: Original strand, 48681948 - 48681993
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||| ||||||||||||||||| |||||||||||| ||||    
T  48681948 accttgcatat-attatgcattgttcataccaactgagctaagctca 48681993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1092 - 1150
Target Start/End: Complemental strand, 49571196 - 49571138
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  49571196 cggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 49571138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1113 - 1151
Target Start/End: Complemental strand, 50727337 - 50727299
Alignment:
Q  1113 tgcatattattatgcattgttcatatcaactgagctaaa 1151  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  50727337 tgcatattattatgcattgttcataccaactgatctaaa 50727299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1073 - 1146
Target Start/End: Original strand, 2884427 - 2884499
Alignment:
Q  1073 tattttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 1146  Q
    |||||| |||| |||||| ||| |||  ||||||||| |||| |||| |||||||||||| |||||||||||||    
T  2884427 tattttttttttgtggtgacggagtttgaacccccgatcttgtatat-attatgcattgtccatatcaactgag 2884499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 587 - 624
Target Start/End: Original strand, 12018490 - 12018527
Alignment:
Q  587 tatatgtcagatacatcaattatttaatgaatttaaaa 624  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  12018490 tatatttcagatacatcaattatttaatgaatctaaaa 12018527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1094 - 1151
Target Start/End: Original strand, 13953874 - 13953930
Alignment:
Q  1094 gggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaa 1151  Q
    |||||||||| ||  ||||||||||| ||||||||||||||||||||| |||| ||||    
T  13953874 gggttcaaacaccaaaccttgcatat-attatgcattgttcatatcaattgagttaaa 13953930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 17139497 - 17139577
Alignment:
Q  1075 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||||||||||| |||||||  |||||| ||||||| |||| |||||||||||| | || |||||||||||| ||||    
T  17139497 tttttttttggtggtggtcggggtttgaaccccggaccttgaatat-attatgcattgtccctaccaactgagctaagctca 17139577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 17280065 - 17280144
Alignment:
Q  1075 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||||||||||| ||||||||||||| | ||||||||||  ||||| ||||||| |||| |||||||||||| ||||    
T  17280065 tttttttttggtggtggtcggggttcaaaccgcagaccttgcat-gtatta-gcattgtccataccaactgagctaagctca 17280144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1108 - 1157
Target Start/End: Complemental strand, 30561770 - 30561722
Alignment:
Q  1108 gaccttgcatattattatgcattgttcatatcaactgagctaaactcatg 1157  Q
    |||||||||||| |||||||||||||| || ||||| |||||||||||||    
T  30561770 gaccttgcatat-attatgcattgttcttaccaacttagctaaactcatg 30561722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Complemental strand, 3936708 - 3936628
Alignment:
Q  1075 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| |||||||| ||||||| |||||| |||||||||||| ||||||||||||||||| |||||||||||| ||||    
T  3936708 ttttttttttgtggtggccggggttcgaaccccggaccttgcatat-attatgcattgttcataccaactgagctaagctca 3936628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 35287487 - 35287567
Alignment:
Q  1075 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| |||||||| ||||||  |||||| ||||||||||||| |||||||||||||||| |||||||||||| ||||    
T  35287487 ttttttttttgtggtggccggggttggaaccccggaccttgcatatt-ttatgcattgttcataccaactgagctaagctca 35287567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Complemental strand, 9946503 - 9946428
Alignment:
Q  1080 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||||| |||||||  |||||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  9946503 ttttggtggtggtcggggtttgaaccccggaccttgcatatt-ttatgcattgtccataccaactgagctaagctca 9946428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1075 - 1158
Target Start/End: Original strand, 11949743 - 11949826
Alignment:
Q  1075 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 1158  Q
    |||| |||| ||||||| |||||||  |||||| |||||||||||| |||||||||||| |||| |||||||||||| |||||||    
T  11949743 ttttttttttgtggtggtcggggtttgaaccccggaccttgcatat-attatgcattgtccataccaactgagctaagctcatga 11949826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Original strand, 28435233 - 28435308
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||| ||||||  ||||||  ||||||||||| |||||||||||| |||| |||||||||||||||||    
T  28435233 ttttggtggtggctggggtttgaaccccgaaccttgcatat-attatgcattgtccataccaactgagctaaactca 28435308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Original strand, 56361798 - 56361874
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||||||| ||||||| |||||  ||||||| ||||||| ||||||||||||||||||||||| ||| ||||    
T  56361798 tttttgtggtggccggggttcgaaccctagaccttgtatattatcatgcattgttcatatcaactgagttaagctca 56361874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Original strand, 19479475 - 19479537
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||  |||||| |||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  19479475 cggggtttgaaccccggaccttgcatat-attatgcattgttcatattaactgagctaagctca 19479537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1080 - 1153
Target Start/End: Complemental strand, 18138339 - 18138265
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 1153  Q
    ||||||||||| | ||||||| ||||| |||||||||||||  ||||||||||   |||||||||||||||||||    
T  18138339 ttttggtggtgtccggggttcgaacccgcgaccttgcatatatttatgcattgactatatcaactgagctaaact 18138265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1092 - 1150
Target Start/End: Complemental strand, 40849718 - 40849660
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||||||||| |||||||||||||  |||| |||| || ||||||||||||||||    
T  40849718 cggggttcaaacccgcgaccttgcatatatttatacattatttatatcaactgagctaa 40849660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1080 - 1153
Target Start/End: Complemental strand, 49125548 - 49125474
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 1153  Q
    ||||||||||| | ||||||| ||||| |||||||||||||  ||||||||||   |||||||||||||||||||    
T  49125548 ttttggtggtgtccggggttcgaacccgcgaccttgcatatatttatgcattgactatatcaactgagctaaact 49125474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1102 - 1155
Target Start/End: Original strand, 19935169 - 19935221
Alignment:
Q  1102 acccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| ||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  19935169 accctcgaccttgcatag-attatgcattgttcttatcaactgagctaaactca 19935221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1109 - 1154
Target Start/End: Complemental strand, 22040696 - 22040652
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaaactc 1154  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||    
T  22040696 accttgcatat-attatgcattgtccatatcaactgagctaaactc 22040652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1122 - 1158
Target Start/End: Original strand, 10262110 - 10262146
Alignment:
Q  1122 ttatgcattgttcatatcaactgagctaaactcatga 1158  Q
    ||||||||||||| |||||||||||||||||||||||    
T  10262110 ttatgcattgttcctatcaactgagctaaactcatga 10262146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Complemental strand, 12698677 - 12698598
Alignment:
Q  1075 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| ||||||||  | ||| |||||| |||||||||||| |||||||||||| || |||||||||||||| ||||    
T  12698677 ttttttttttgtggtggccagattcgaaccccagaccttgcatat-attatgcattgtccaaatcaactgagctaagctca 12698598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1122 - 1158
Target Start/End: Complemental strand, 19587873 - 19587837
Alignment:
Q  1122 ttatgcattgttcatatcaactgagctaaactcatga 1158  Q
    ||||||||||||| |||||||||||||||||||||||    
T  19587873 ttatgcattgttcctatcaactgagctaaactcatga 19587837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1108 - 1156
Target Start/End: Original strand, 20403182 - 20403229
Alignment:
Q  1108 gaccttgcatattattatgcattgttcatatcaactgagctaaactcat 1156  Q
    |||||||||||| |||||||||||||| ||||||||||||||| |||||    
T  20403182 gaccttgcatat-attatgcattgttcctatcaactgagctaagctcat 20403229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1122 - 1158
Target Start/End: Complemental strand, 21562345 - 21562309
Alignment:
Q  1122 ttatgcattgttcatatcaactgagctaaactcatga 1158  Q
    ||||||||||||| |||||||||||||||||||||||    
T  21562345 ttatgcattgttcctatcaactgagctaaactcatga 21562309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1122 - 1158
Target Start/End: Original strand, 24080181 - 24080217
Alignment:
Q  1122 ttatgcattgttcatatcaactgagctaaactcatga 1158  Q
    ||||||||||||| |||||||||||||||||||||||    
T  24080181 ttatgcattgttcctatcaactgagctaaactcatga 24080217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Original strand, 24664976 - 24665051
Alignment:
Q  1080 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| ||||||| |||||||| |||||| ||||||||||| ||||||||||| | |||| |||||||||||| ||||    
T  24664976 tttttgtggtggtcggggttcgaaccccggaccttgcata-tattatgcattctccataccaactgagctaagctca 24665051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1092 - 1164
Target Start/End: Complemental strand, 34033396 - 34033325
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaaaactt 1164  Q
    |||||||||||| || ||||||||||||| |||||||| |||| ||||||||||| ||| |||| || |||||    
T  34033396 cggggttcaaactccggaccttgcatatt-ttatgcatggttcttatcaactgagttaagctcacgataactt 34033325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Complemental strand, 38453341 - 38453266
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||| ||||||| |||||  |||||||||||| |||||||||||| |||  |||||||||||| ||||    
T  38453341 ttttggtggtggctggggttcgaaccctggaccttgcatat-attatgcattgtccatgccaactgagctaagctca 38453266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1122 - 1158
Target Start/End: Complemental strand, 43329866 - 43329830
Alignment:
Q  1122 ttatgcattgttcatatcaactgagctaaactcatga 1158  Q
    ||||||||||||| |||||||||||||||||||||||    
T  43329866 ttatgcattgttcctatcaactgagctaaactcatga 43329830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Original strand, 54857600 - 54857675
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||| ||||||  |||||| ||||||||||||| |||||||||||| ||| |||| ||||||| ||||    
T  54857600 ttttggtggtggccggggtttgaaccccggaccttgcatatt-ttatgcattgtttataccaaccgagctaagctca 54857675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1080 - 1146
Target Start/End: Original strand, 11144650 - 11144716
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 1146  Q
    ||||||||||| | |||||||||||||| ||||||||||| |||||||||||||   |||||||||||    
T  11144650 ttttggtggtgtccggggttcaaaccccagaccttgcata-tattatgcattgtctttatcaactgag 11144716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1080 - 1150
Target Start/End: Original strand, 26097722 - 26097793
Alignment:
Q  1080 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||||||  |||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  26097722 ttttggtggtgttcggggttcgaacccgcgaccttgcatatatttatacattgtatatatcaactgagctaa 26097793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 586 - 625
Target Start/End: Complemental strand, 26863168 - 26863129
Alignment:
Q  586 atatatgtcagatacatcaattatttaatgaatttaaaat 625  Q
    |||||| |||||||||||||||||| ||||||||||||||    
T  26863168 atatatatcagatacatcaattattcaatgaatttaaaat 26863129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1080 - 1150
Target Start/End: Original strand, 29099694 - 29099765
Alignment:
Q  1080 ttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    ||||||||||| | ||| ||| ||||| |||||||||||||  |||||||||||  ||||||||||||||||    
T  29099694 ttttggtggtgtctgggattcgaacccgcgaccttgcatatatttatgcattgtctatatcaactgagctaa 29099765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Complemental strand, 32139403 - 32139340
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||| |||||| ||||||||||||  ||||| ||||| | ||||||||||||||| ||||    
T  32139403 cggggttcgaaccccggaccttgcatatatttatgtattgtccctatcaactgagctaagctca 32139340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Original strand, 35021465 - 35021527
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||| ||||||  |||||||||||| ||||| ||||| ||||||||||||||||| ||||    
T  35021465 cggggttcgaaccccgaaccttgcatatt-ttatgtattgtccatatcaactgagctaagctca 35021527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1120 - 1155
Target Start/End: Complemental strand, 35998035 - 35998000
Alignment:
Q  1120 tattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||| ||||||||||||||||||||||    
T  35998035 tattatgcattgtccatatcaactgagctaaactca 35998000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1109 - 1156
Target Start/End: Original strand, 48251923 - 48251969
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaaactcat 1156  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  48251923 accttgcatat-attatacattgttcatatcaactgagctaaattcat 48251969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1080 - 1150
Target Start/End: Complemental strand, 52620641 - 52620570
Alignment:
Q  1080 ttttggtggtggcggg-gttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    ||||||||||| | || |||| ||||| |||||||||||||  |||||||||||  ||||||||||||||||    
T  52620641 ttttggtggtgtccggagttcgaacccgcgaccttgcatatatttatgcattgtctatatcaactgagctaa 52620570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Original strand, 56564981 - 56565043
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||| |||||  ||||||||||||| ||||||||||| |||||||| |||||||| ||||    
T  56564981 cggggttcgaaccctagaccttgcatatt-ttatgcattgtccatatcaattgagctaagctca 56565043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1101 - 1159
Target Start/End: Complemental strand, 897479 - 897422
Alignment:
Q  1101 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaa 1159  Q
    |||||| |||||| ||||| ||||| |||||| |||| |||||||||||||||||||||    
T  897479 aaccccggaccttacatat-attatacattgtccataccaactgagctaaactcatgaa 897422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1075 - 1149
Target Start/End: Original strand, 8020629 - 8020701
Alignment:
Q  1075 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagcta 1149  Q
    |||| ||||||||||||| |||||| || || |||||||||||| ||||||||||||| || | |||||||||||    
T  8020629 tttttttttggtggtggccgggttcgaa-cctcgaccttgcata-tattatgcattgtccaaaccaactgagcta 8020701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1092 - 1150
Target Start/End: Complemental strand, 11180897 - 11180839
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  11180897 cggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 11180839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1092 - 1150
Target Start/End: Complemental strand, 16431679 - 16431622
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||  |||||| ||||||||||||| ||||||||||| |||| ||||||||||||    
T  16431679 cggggtttgaaccccagaccttgcatatt-ttatgcattgtccataccaactgagctaa 16431622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1101 - 1155
Target Start/End: Complemental strand, 20383542 - 20383489
Alignment:
Q  1101 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||| |||||||||||| |||||||||||| |||| |||||||||||| ||||    
T  20383542 aaccccggaccttgcatat-attatgcattgtccataccaactgagctaagctca 20383489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1109 - 1155
Target Start/End: Original strand, 39171385 - 39171430
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  39171385 accttgcatatt-ttatgcattgtccatatcaactgagctaagctca 39171430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1092 - 1150
Target Start/End: Complemental strand, 43117505 - 43117447
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  43117505 cggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 43117447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1109 - 1155
Target Start/End: Original strand, 43374287 - 43374332
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  43374287 accttgcatatt-ttatgcattgtccatatcaactgagctaagctca 43374332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1080 - 1157
Target Start/End: Original strand, 46676483 - 46676560
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatg 1157  Q
    ||||||||||| | |||| || |||||| |||||||||||| |||||||||||| | || |||||||||||| ||||||    
T  46676483 ttttggtggtgtctgggggtcgaaccccggaccttgcatat-attatgcattgtccttaccaactgagctaagctcatg 46676560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1101 - 1162
Target Start/End: Complemental strand, 675972 - 675912
Alignment:
Q  1101 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaaaac 1162  Q
    |||||| |||||||||||| |||||||||||| || | |||||||||||| |||||| ||||    
T  675972 aaccccggaccttgcatat-attatgcattgtccaaaccaactgagctaagctcatgcaaac 675912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1073 - 1153
Target Start/End: Original strand, 2649711 - 2649791
Alignment:
Q  1073 tattttcttttggtggtggcg-gggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 1153  Q
    |||||| |||| ||||||||  |||||| ||| || |||||||||||| |||||||||||| | || |||||||||||||||    
T  2649711 tattttttttttgtggtggctagggttcgaactccggaccttgcatat-attatgcattgtccctaccaactgagctaaact 2649791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 8027377 - 8027457
Alignment:
Q  1075 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| ||||||| |||||||  ||||||||| ||||||||| |||||||||| | | || |||||||||||||||||    
T  8027377 ttttttttttgtggtggtcggggtttgaacccccgatcttgcatat-attatgcattatccttaccaactgagctaaactca 8027457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 12671728 - 12671808
Alignment:
Q  1075 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| ||||||| || ||||| |||||| || |||||||||| |||||||||||  ||| |||||||||||||||||    
T  12671728 ttttttttttgtggtggtcgaggttcgaaccccggatcttgcatatt-ttatgcattgtctataccaactgagctaaactca 12671808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1108 - 1153
Target Start/End: Original strand, 16304112 - 16304156
Alignment:
Q  1108 gaccttgcatattattatgcattgttcatatcaactgagctaaact 1153  Q
    |||||||||||| |||||||||||| |||| |||||||||||||||    
T  16304112 gaccttgcatat-attatgcattgtccataccaactgagctaaact 16304156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1110 - 1151
Target Start/End: Original strand, 19347335 - 19347375
Alignment:
Q  1110 ccttgcatattattatgcattgttcatatcaactgagctaaa 1151  Q
    ||||||||||| ||||||||||| ||||||||||||||||||    
T  19347335 ccttgcatatt-ttatgcattgtccatatcaactgagctaaa 19347375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 22164249 - 22164329
Alignment:
Q  1075 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| ||||| |||||| |||||||  |||||| |||||| ||||| |||||||||||||| || ||||| |||||||||||    
T  22164249 tttttttttgttggtggtcggggtttgaaccccagaccttacatat-attatgcattgttcctaccaactaagctaaactca 22164329  T

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Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 23247578 - 23247658
Alignment:
Q  1075 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| |||||||| |||||| ||||||| ||||||||||| |||||||| |||| |||| |||| ||||||| ||||    
T  23247578 ttttttttttgtggtggccggggtttaaaccccagaccttgcata-tattatgcgttgtccataccaaccgagctaagctca 23247658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Complemental strand, 32180911 - 32180831
Alignment:
Q  1075 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| ||||||| |||||||| |||||| ||| ||||||||| |||||||||||  ||| |||||||||||| ||||    
T  32180911 ttttttttttgtggtggtcggggttcgaaccccagactttgcatatt-ttatgcattgtctataccaactgagctaagctca 32180831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Complemental strand, 1604 - 1529
Alignment:
Q  1080 ttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||||||| ||| |||||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  1604 ttttggtggtggcgggggttcgaaccccggaccttgcatatt-ttatgcattgtccataccaactgagctaagctca 1529  T

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Target: chr6 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Original strand, 12700406 - 12700481
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||| |||||||||||||  |||||||||||| ||||||||||||||||| ||||||| |||| ||||    
T  12700406 ttttggtggtggccggggttcaaaccctagaccttgcatat-attatgcattgttcataccaactgaactaagctca 12700481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Complemental strand, 34828370 - 34828307
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||| |||| | |||||| |||||||||||||||||| |||| |||||||||||||||||    
T  34828370 cggggttcgaacctcagaccttacatattattatgcattgtccataccaactgagctaaactca 34828307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Complemental strand, 9111110 - 9111048
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||| ||||||| |||| ||||    
T  9111110 cggggttcgaaccccggaccttgcatat-attatgcattgttcataccaactgaactaagctca 9111048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1080 - 1153
Target Start/End: Original strand, 6018644 - 6018718
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 1153  Q
    ||||||||||| | ||||||| ||||| |||||||||||||  |||| ||||||  |||||||||||||||||||    
T  6018644 ttttggtggtgtccggggttcgaacccacgaccttgcatatatttatacattgtctatatcaactgagctaaact 6018718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Complemental strand, 24269960 - 24269884
Alignment:
Q  1080 ttttggtggtggcgggg--ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||||||||||  ||||||||||  |||||||||||| ||||||||||| ||||  ||||||||||| ||||    
T  24269960 ttttggtggtggcgggggattcaaaccccgaaccttgcatatt-ttatgcattgtccatactaactgagctaagctca 24269884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1092 - 1158
Target Start/End: Complemental strand, 33975993 - 33975927
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 1158  Q
    |||||||| |||||| ||| |  |||||  ||||||||||||| |||||||||||||||||||||||    
T  33975993 cggggttcgaaccccggacttgacatatatttatgcattgttcctatcaactgagctaaactcatga 33975927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 655729 - 655809
Alignment:
Q  1075 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| ||||||| ||||| ||||||| |||||| ||||||||||| |||||||||||||  ||| |||||||||||| ||||    
T  655729 tttttttttggtagtggccggggttcgaaccccggaccttgcata-tattatgcattgtcgataccaactgagctaagctca 655809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Complemental strand, 13496197 - 13496117
Alignment:
Q  1075 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||||||| ||| |||||||  ||| || |||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  13496197 tttttttttggtgttggtcggggtttgaactccggaccttgcatat-attatgcattgttcatatcaactgagttaagctca 13496117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 24623297 - 24623377
Alignment:
Q  1075 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| ||||||| |||||||  ||||||  ||||| ||||| |||||||||||| ||||||||||||||||||||||    
T  24623297 ttttgttttagtggtggtcggggtttgaaccccgaaccttacatat-attatgcattgtccatatcaactgagctaaactca 24623377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1122 - 1158
Target Start/End: Complemental strand, 247379 - 247343
Alignment:
Q  1122 ttatgcattgttcatatcaactgagctaaactcatga 1158  Q
    ||||||||||||| |||||||||||||||||||||||    
T  247379 ttatgcattgttcctatcaactgagctaaactcatga 247343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 4494852 - 4494931
Alignment:
Q  1075 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| |||||||| |||||| || ||| ||||| ||||||| ||||||||||| |||| |||||||||||| ||||    
T  4494852 ttttttttttgtggtggccgggttcgaatcccagacctcgcatatt-ttatgcattgtccataccaactgagctaagctca 4494931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Original strand, 9392666 - 9392728
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||| ||||| | |||||||||||| |||||||||| |||||| |||||||||||| ||||    
T  9392666 cggggtttaaacctcggaccttgcatat-attatgcatttttcataacaactgagctaagctca 9392728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1115 - 1150
Target Start/End: Original strand, 14036299 - 14036334
Alignment:
Q  1115 catattattatgcattgttcatatcaactgagctaa 1150  Q
    ||||||||||||||||||||||| ||||||||||||    
T  14036299 catattattatgcattgttcataccaactgagctaa 14036334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Complemental strand, 20744201 - 20744139
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||  |||||| |||||||||||| |||||||||||| |||| |||||||||||| ||||    
T  20744201 cggggtttgaaccccagaccttgcatat-attatgcattgtccataccaactgagctaagctca 20744139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Complemental strand, 26400927 - 26400865
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||||| ||||||||||| ||||||| ||||| |||| ||| |||||||| ||||    
T  26400927 cggggttcaaaccccggaccttgcata-tattatgtattgtccataccaattgagctaagctca 26400865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1081 - 1146
Target Start/End: Complemental strand, 2445374 - 2445309
Alignment:
Q  1081 tttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 1146  Q
    ||||||||||| |||||||| ||||||  | |||| |||| ||||||||||||||||||||||||||    
T  2445374 tttggtggtggtcggggttcgaaccccgaatcttgtatat-attatgcattgttcatatcaactgag 2445309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1092 - 1146
Target Start/End: Original strand, 2726415 - 2726468
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 1146  Q
    |||||||| |||||| ||||||||||| ||||||||||||| |||| ||||||||    
T  2726415 cggggttcgaaccccggaccttgcata-tattatgcattgtccataccaactgag 2726468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1101 - 1151
Target Start/End: Original strand, 8138465 - 8138514
Alignment:
Q  1101 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaa 1151  Q
    |||||| |||||| ||||| |||||||||||||| ||||||||||||||||    
T  8138465 aaccccagaccttacatat-attatgcattgttcttatcaactgagctaaa 8138514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1109 - 1155
Target Start/End: Original strand, 12904332 - 12904377
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  12904332 accttgcatat-attatgcattgttcatatcaactgaggtaagctca 12904377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1109 - 1155
Target Start/End: Complemental strand, 14350995 - 14350950
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||| ||||| ||||||||||||||||||||||||| ||||||||    
T  14350995 accttgtatatt-ttatgcattgttcatatcaactgagttaaactca 14350950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1092 - 1150
Target Start/End: Complemental strand, 19988885 - 19988827
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  19988885 cggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 19988827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1109 - 1155
Target Start/End: Original strand, 32193874 - 32193919
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||    
T  32193874 accttgcatat-attatgcattgttcttaccaactgagctaaactca 32193919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1109 - 1155
Target Start/End: Original strand, 33938694 - 33938739
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||| ||||||||||||||||| |||||||||||| ||||    
T  33938694 accttgcatat-attatgcattgttcataccaactgagctaagctca 33938739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1101 - 1150
Target Start/End: Complemental strand, 33824935 - 33824887
Alignment:
Q  1101 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||| |||||||||||| |||||||||||| | |||||||||||||||    
T  33824935 aaccccggaccttgcatat-attatgcattgtccttatcaactgagctaa 33824887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1080 - 1156
Target Start/End: Complemental strand, 25385127 - 25385052
Alignment:
Q  1080 ttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcat 1156  Q
    ||||||||||||| ||||||||||||   |||||||||||| |||||||||||||||| ||| |||| |||||||||    
T  25385127 ttttggtggtggctgggttcaaaccctgaaccttgcatatt-ttatgcattgttcataccaattgagttaaactcat 25385052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1080 - 1162
Target Start/End: Complemental strand, 26655540 - 26655458
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaaaac 1162  Q
    ||||||||||||| ||||||| |||||| |||||| ||||| |||||||||||| |||| |||||||||| | |||||||||||    
T  26655540 ttttggtggtggccggggttcgaaccccggaccttacatat-attatgcattgtccataccaactgagctgagctcatgaaaac 26655458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1080 - 1162
Target Start/End: Complemental strand, 26927125 - 26927043
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaaaac 1162  Q
    ||||||||||||| ||||||| |||||| |||||| ||||| |||||||||||| |||| |||||||||| | |||||||||||    
T  26927125 ttttggtggtggccggggttcgaaccccggaccttacatat-attatgcattgtccataccaactgagctgagctcatgaaaac 26927043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1092 - 1150
Target Start/End: Original strand, 16166373 - 16166431
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||||||||| |||||||||||||  |||||||||||  ||||||||||||||||    
T  16166373 cggggttcaaacccgcgaccttgcatatatttatgcattgtctatatcaactgagctaa 16166431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1078 - 1158
Target Start/End: Original strand, 5150065 - 5150146
Alignment:
Q  1078 tcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 1158  Q
    |||||||||||| | |||||||| |||||| |||||| |||||||||||||||||| ||||  ||||||| ||| |||||||    
T  5150065 tcttttggtggttgtcggggttcgaaccccagaccttacatattattatgcattgtccatactaactgaggtaacctcatga 5150146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Complemental strand, 6624852 - 6624777
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||| ||||||| |||||| |||||||||||| |||||||||||| |||  |||||||||||| ||||    
T  6624852 ttttggtggtggccggggttcgaaccccggaccttgcatat-attatgcattgtccatgccaactgagctaagctca 6624777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Original strand, 31561329 - 31561404
Alignment:
Q  1080 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||| |||| ||||||||||||||  ||||||||||||||||||||||||| |||| |||||||| ||| ||||    
T  31561329 ttttggtagtggtcggggttcaaacccg-gaccttgcatattattatgcattgtccataccaactgagttaagctca 31561404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Original strand, 18489074 - 18489136
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||||| || |||||||||||| ||||||||||||  ||| |||||||||||||||||    
T  18489074 cggggttcaaactccagaccttgcatat-attatgcattgtctataccaactgagctaaactca 18489136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Original strand, 18589853 - 18589927
Alignment:
Q  1080 ttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||||   ||||| ||||||| |||||||||||| ||||||||||||||||| |||||||| ||| ||||    
T  18589853 ttttggtggtgatcgggtttaaaccccggaccttgcatat-attatgcattgttcataccaactgagttaagctca 18589927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 22522781 - 22522861
Alignment:
Q  1075 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| ||||||||||||| ||||||  |||||| |||||||||||| |||||||||||| |||| |||| ||||||| ||||    
T  22522781 tttttttttggtggtggccggggtttgaaccccggaccttgcatat-attatgcattgtccataccaaccgagctaagctca 22522861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1090 - 1155
Target Start/End: Complemental strand, 26409318 - 26409254
Alignment:
Q  1090 ggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||| |||||| |||||| ||||| |||||||||||| |||| |||||||||||| ||||    
T  26409318 ggcggggttcgaaccccggaccttacatat-attatgcattgtccataccaactgagctaagctca 26409254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1095 - 1152
Target Start/End: Original strand, 27479631 - 27479688
Alignment:
Q  1095 ggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaac 1152  Q
    ||||| |||||| |||||||||||||||||| |||||| | ||||||||||| |||||    
T  27479631 ggttcgaaccccagaccttgcatattattatacattgtacttatcaactgagttaaac 27479688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Complemental strand, 34436932 - 34436852
Alignment:
Q  1075 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||||||| |||||||  |||||| | |||||||||| |||||||||||| | || |||||||||||| ||||    
T  34436932 ttttcttttggtggtgggcggggtttgaaccccggcccttgcatat-attatgcattgtccctaccaactgagctaagctca 34436852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1094 - 1155
Target Start/End: Complemental strand, 37932391 - 37932331
Alignment:
Q  1094 gggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||| |||||| |||||||||||| |||||||||||| |||| |||||||||||| ||||    
T  37932391 gggttcgaaccccggaccttgcatat-attatgcattgtccataccaactgagctaagctca 37932331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Complemental strand, 6489083 - 6489008
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||| ||||||  |||||| |||||||||||| |||||||||||| | || |||||||||||| ||||    
T  6489083 ttttggtggtggccggggtttgaaccccagaccttgcatat-attatgcattgtccctaccaactgagctaagctca 6489008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1074 - 1150
Target Start/End: Complemental strand, 12190073 - 12189998
Alignment:
Q  1074 attttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    ||||| |||| ||||||||||||||  ||||||||||||| |||| ||||||| ||||| |||| ||||| ||||||    
T  12190073 attttttttttgtggtggcggggtttgaacccccgaccttacata-tattatgtattgtccataccaactaagctaa 12189998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1095 - 1147
Target Start/End: Original strand, 31708147 - 31708198
Alignment:
Q  1095 ggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagc 1147  Q
    ||||| |||||| |||||||||||| ||||||||||||||||| |||||||||    
T  31708147 ggttcgaaccccagaccttgcatat-attatgcattgttcataccaactgagc 31708198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1122 - 1158
Target Start/End: Complemental strand, 37461831 - 37461795
Alignment:
Q  1122 ttatgcattgttcatatcaactgagctaaactcatga 1158  Q
    ||||||||||||| |||||||||||||||||||||||    
T  37461831 ttatgcattgttcctatcaactgagctaaactcatga 37461795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Original strand, 40715934 - 40716009
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||||||| ||||||  |||||| |||||||||||| |||||||||||| |||||||| |||||||| ||||    
T  40715934 tttttgtggtggccggggtttgaaccccggaccttgcatat-attatgcattgtccatatcaattgagctaagctca 40716009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1080 - 1150
Target Start/End: Complemental strand, 2530087 - 2530016
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    ||||||||||| | ||||||| ||||  |||||||||||||  |||||||||||  ||||||||||||||||    
T  2530087 ttttggtggtgtccggggttcgaacctgcgaccttgcatatatttatgcattgtctatatcaactgagctaa 2530016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1075 - 1146
Target Start/End: Complemental strand, 5614845 - 5614775
Alignment:
Q  1075 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 1146  Q
    |||| |||| ||||||| ||||||  ||||||||||||| |||| ||||||||||| | |||||||||||||    
T  5614845 ttttttttttgtggtggtggggtttgaacccccgaccttacata-tattatgcattatccatatcaactgag 5614775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1123 - 1158
Target Start/End: Complemental strand, 13351489 - 13351454
Alignment:
Q  1123 tatgcattgttcatatcaactgagctaaactcatga 1158  Q
    |||||||||||| |||||||||||||||||||||||    
T  13351489 tatgcattgttcctatcaactgagctaaactcatga 13351454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1120 - 1159
Target Start/End: Complemental strand, 18147754 - 18147715
Alignment:
Q  1120 tattatgcattgttcatatcaactgagctaaactcatgaa 1159  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  18147754 tattatgcattgtccttatcaactgagctaaactcatgaa 18147715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1108 - 1155
Target Start/End: Complemental strand, 32283627 - 32283580
Alignment:
Q  1108 gaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||| |||||||||||||||||| |||| |||||||||||| ||||    
T  32283627 gaccttacatattattatgcattgtccataccaactgagctaagctca 32283580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1120 - 1155
Target Start/End: Complemental strand, 33584120 - 33584085
Alignment:
Q  1120 tattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||| |||||||||||||||||||||||||||||    
T  33584120 tattatacattgttcatatcaactgagctaaactca 33584085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 597 - 636
Target Start/End: Original strand, 35922124 - 35922163
Alignment:
Q  597 atacatcaattatttaatgaatttaaaattttaattgttt 636  Q
    |||||||||||||||||||||||||||| || ||||||||    
T  35922124 atacatcaattatttaatgaatttaaaaattcaattgttt 35922163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1109 - 1155
Target Start/End: Complemental strand, 7713578 - 7713533
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||| |||||||||| ||||||||||||||| ||||||||    
T  7713578 accttgcatat-attatgcattattcatatcaactgagttaaactca 7713533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1092 - 1150
Target Start/End: Complemental strand, 8314817 - 8314759
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||| ||||  |||||||||||||  |||| ||||||| ||||||||||||||||    
T  8314817 cggggttcgaacctacgaccttgcatatatttatacattgtttatatcaactgagctaa 8314759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1101 - 1155
Target Start/End: Original strand, 10704338 - 10704391
Alignment:
Q  1101 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  10704338 aaccccggaccttgcatatt-ttatgcattgtccataccaactgagctaagctca 10704391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1109 - 1155
Target Start/End: Complemental strand, 27903159 - 27903114
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  27903159 accttgcatat-attatgcattgttcataccaactgaactaaactca 27903114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1092 - 1146
Target Start/End: Complemental strand, 37147053 - 37146999
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 1146  Q
    |||||||| ||||| |||||||||||||  |||| ||||||| ||||||||||||    
T  37147053 cggggttcgaacccgcgaccttgcatatatttatacattgtttatatcaactgag 37146999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1092 - 1150
Target Start/End: Original strand, 42111894 - 42111952
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  42111894 cggggttcgaacccgcgaccttgcatatatttatacattgtcaatatcaactgagctaa 42111952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1111 - 1156
Target Start/End: Complemental strand, 1488409 - 1488364
Alignment:
Q  1111 cttgcatattattatgcattgttcatatcaactgagctaaactcat 1156  Q
    |||||||||| ||||||||||| |||| |||||||||||| |||||    
T  1488409 cttgcatatttttatgcattgtccataccaactgagctaagctcat 1488364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 531 - 564
Target Start/End: Original strand, 6500011 - 6500044
Alignment:
Q  531 ttgacattttagatttattagataattgatgtat 564  Q
    |||||||||||||||||||| |||||||||||||    
T  6500011 ttgacattttagatttattaaataattgatgtat 6500044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1120 - 1153
Target Start/End: Complemental strand, 13409586 - 13409553
Alignment:
Q  1120 tattatgcattgttcatatcaactgagctaaact 1153  Q
    ||||||||||||||| ||||||||||||||||||    
T  13409586 tattatgcattgttcttatcaactgagctaaact 13409553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1102 - 1155
Target Start/End: Complemental strand, 13796383 - 13796331
Alignment:
Q  1102 acccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||| |||||||||||| ||||||||||||||||||| |||||| ||| ||||    
T  13796383 accccagaccttgcatat-attatgcattgttcatatcgactgagttaagctca 13796331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 25603980 - 25604060
Alignment:
Q  1075 ttttcttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| ||||| ||||||| ||| ||| ||||||  ||||||||||| |||||||| ||| ||||||||||||||||| ||||    
T  25603980 tttttttttgttggtggccgggattcgaaccccgaaccttgcatat-attatgcactgtccatatcaactgagctaagctca 25604060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Complemental strand, 28207213 - 28207133
Alignment:
Q  1075 ttttcttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| |||||||| ||| ||| |||| | ||||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  28207213 ttttttttttgtggtggccgggattcgaacctcggaccttgcatatt-ttatgcattgtccataccaactgagctaagctca 28207133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1109 - 1150
Target Start/End: Original strand, 31602840 - 31602880
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    ||||||||||| ||||||||||||||||| ||||||||||||    
T  31602840 accttgcatat-attatgcattgttcataccaactgagctaa 31602880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 21506740 - 21506818
Alignment:
Q  1075 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| ||||||||| | ||||||||||||||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  21506740 tttttttttggtgg-gccggggttcaaaccccagaccttgcatatt-ttatgcattgtccataccaactgagctaagctca 21506818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1081 - 1155
Target Start/End: Original strand, 52904130 - 52904203
Alignment:
Q  1081 tttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||||||||  |||||||||| ||||||| ||||||||||||| | || |||||||||||| ||||    
T  52904130 tttggtggtggcggggtttgaacccccgacattgcata-tattatgcattgtccttaccaactgagctaacctca 52904203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1074 - 1155
Target Start/End: Original strand, 20370261 - 20370341
Alignment:
Q  1074 attttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||| |||| |||||||| |||||| |||||   |||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  20370261 attttttttttgtggtggctgggttcgaaccctaaaccttgcatatt-ttatgcattgtccatatcaactgagctaagctca 20370341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1080 - 1148
Target Start/End: Complemental strand, 44582801 - 44582732
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagct 1148  Q
    |||| |||||||| ||||||| |||||| ||||||||||||||||||||||||  |||| ||||||||||    
T  44582801 tttttgtggtggccggggttcgaaccccggaccttgcatattattatgcattgcccataccaactgagct 44582732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 47313351 - 47313432
Alignment:
Q  1075 ttttcttttggtggtggcgg-ggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| |||||||| | |||||||| |||  |||||||||||||||||||||||| |||| |||||||||||| ||||    
T  47313351 ttttttttttgtggtggccgaggttcaaatcccgaaccttgcatattattatgcattgtccataccaactgagctaagctca 47313432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Original strand, 25340909 - 25340984
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||| ||||||  |||||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  25340909 ttttggtggtggccggggtttgaaccccggaccttgcatatt-ttatgcattgtccataccaactgagctaagctca 25340984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1075 - 1150
Target Start/End: Complemental strand, 52576028 - 52575953
Alignment:
Q  1075 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||| ||| |||||||| |||| ||| |||||| ||||||||||||| |||||||||||||||| ||||||||||||    
T  52576028 ttttttttcggtggtggtcgggattcgaaccccagaccttgcatatt-ttatgcattgttcataccaactgagctaa 52575953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Original strand, 28244102 - 28244164
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||| |||||| ||||||||||||| |||||||||||||||| |||||||| ||| ||||    
T  28244102 cggggttcgaaccccggaccttgcatatt-ttatgcattgttcataccaactgagttaagctca 28244164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1092 - 1155
Target Start/End: Complemental strand, 44579699 - 44579637
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||| |||||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  44579699 cggggttcgaaccccggaccttgcatatt-ttatgcattgtccataccaactgagctaagctca 44579637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1109 - 1156
Target Start/End: Complemental strand, 51505919 - 51505873
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaaactcat 1156  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  51505919 accttgcatatt-ttatgcattgtccatatcaactgagctaaactcat 51505873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1073 - 1150
Target Start/End: Original strand, 25441478 - 25441555
Alignment:
Q  1073 tattttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||| |||| |||||||| ||||||  |||||| |||||||||||| |||||||||||| |||| ||||||||||||    
T  25441478 tattttttttttgtggtggccggggtttgaaccccagaccttgcatat-attatgcattgtccataccaactgagctaa 25441555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Complemental strand, 14827606 - 14827526
Alignment:
Q  1075 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| |||||||| |||||| ||||||| || |||||||||| ||||||||||| |||| |||||||||||| ||||    
T  14827606 ttttttttttgtggtggccggggtttaaaccccggatcttgcatatt-ttatgcattgtccataccaactgagctaagctca 14827526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Original strand, 38130939 - 38131019
Alignment:
Q  1075 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| ||||||||||||| ||||||  |||||| |||||||||||| |||||||||||| |||| |||||||| ||| ||||    
T  38130939 tttttttttggtggtggccggggtttgaaccccggaccttgcatat-attatgcattgtccataccaactgagttaagctca 38131019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1101 - 1150
Target Start/End: Complemental strand, 38894091 - 38894043
Alignment:
Q  1101 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  38894091 aaccccggaccttgcatatt-ttatacattgttcatatcaactgagctaa 38894043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Complemental strand, 53996380 - 53996300
Alignment:
Q  1075 ttttcttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| |||||||| ||| ||| |||||| |||||||||||| |||||||||||| |||| |||||||||||| ||||    
T  53996380 ttttttttttgtggtggccgggattcgaaccccagaccttgcatat-attatgcattgtccataccaactgagctaagctca 53996300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1122 - 1158
Target Start/End: Complemental strand, 916237 - 916201
Alignment:
Q  1122 ttatgcattgttcatatcaactgagctaaactcatga 1158  Q
    ||||||||||||| |||||||||||||||||||||||    
T  916237 ttatgcattgttcctatcaactgagctaaactcatga 916201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1115 - 1155
Target Start/End: Complemental strand, 5030246 - 5030206
Alignment:
Q  1115 catattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  5030246 catattattatgcattgttcataccaactgaactaaactca 5030206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1092 - 1156
Target Start/End: Original strand, 54230097 - 54230160
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcat 1156  Q
    |||||||| ||||||  ||||||||||| |||||||||||| | || ||||||||||||||||||    
T  54230097 cggggttcgaaccccaaaccttgcatat-attatgcattgtccttaccaactgagctaaactcat 54230160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1075 - 1146
Target Start/End: Complemental strand, 21160132 - 21160062
Alignment:
Q  1075 ttttcttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgag 1146  Q
    |||| |||| ||||||| ||||||  ||||||||||||| |||| ||||||||||| | |||||||||||||    
T  21160132 ttttttttttgtggtggtggggtttgaacccccgaccttacata-tattatgcattatccatatcaactgag 21160062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1080 - 1158
Target Start/End: Complemental strand, 29631262 - 29631184
Alignment:
Q  1080 ttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatga 1158  Q
    ||||||||||||| ||||||  || |||  ||||||||||| |||||||||||| |||| |||||||||||| |||||||    
T  29631262 ttttggtggtggccggggtttgaatcccgaaccttgcatat-attatgcattgtccataccaactgagctaagctcatga 29631184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1096 - 1155
Target Start/End: Complemental strand, 32629139 - 32629081
Alignment:
Q  1096 gttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  32629139 gttcgaaccccggaccttgcatatt-ttatgcattgtccataccaactgagctaagctca 32629081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1107 - 1150
Target Start/End: Complemental strand, 40862220 - 40862177
Alignment:
Q  1107 cgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    ||||||| ||||||||||| ||||||||||| ||||||||||||    
T  40862220 cgaccttacatattattatacattgttcataacaactgagctaa 40862177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1108 - 1155
Target Start/End: Original strand, 43345021 - 43345067
Alignment:
Q  1108 gaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||||| |||||| |||||||||| |||||||||||||||||    
T  43345021 gaccttgcatat-attatgtattgttcataccaactgagctaaactca 43345067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1108 - 1155
Target Start/End: Original strand, 43490431 - 43490477
Alignment:
Q  1108 gaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||||||| ||||||||||||||||| |||||||||||| ||||    
T  43490431 gaccttgcatat-attatgcattgttcataccaactgagctaagctca 43490477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1104 - 1150
Target Start/End: Original strand, 4216409 - 4216454
Alignment:
Q  1104 ccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||||||||||| |||||||||||| | |||||||||||||||    
T  4216409 ccccgaccttgcatat-attatgcattgtccttatcaactgagctaa 4216454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1101 - 1155
Target Start/End: Complemental strand, 25874185 - 25874131
Alignment:
Q  1101 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||| |||||| |||||||||||||||||| |||| |||||||| ||| ||||    
T  25874185 aaccccggaccttacatattattatgcattgtccataccaactgagttaagctca 25874131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1101 - 1155
Target Start/End: Complemental strand, 33745153 - 33745100
Alignment:
Q  1101 aacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||| ||||||||||||| ||||||||||| |||||||| |||||||| ||||    
T  33745153 aaccccagaccttgcatatt-ttatgcattgtccatatcaattgagctaagctca 33745100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1092 - 1150
Target Start/End: Original strand, 46090201 - 46090259
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||| ||| | |||||||||||||  |||||||||||  ||||||||||||||||    
T  46090201 cggggttcgaactcgcgaccttgcatatatttatgcattgtctatatcaactgagctaa 46090259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1092 - 1150
Target Start/End: Complemental strand, 48961111 - 48961053
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||| ||||| |||| ||||||||  |||||||||||  ||||||||||||||||    
T  48961111 cggggttcgaacccgcgactttgcatatatttatgcattgtctatatcaactgagctaa 48961053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1109 - 1155
Target Start/End: Complemental strand, 49088798 - 49088753
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||| |||||| |||||||||||| |||||||||||||||||||||    
T  49088798 accttacatatt-ttatgcattgtttatatcaactgagctaaactca 49088753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1113 - 1155
Target Start/End: Original strand, 51379798 - 51379839
Alignment:
Q  1113 tgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||||| ||||||||||||||||||||||||| ||||||||    
T  51379798 tgcatatt-ttatgcattgttcatatcaactgaggtaaactca 51379839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Original strand, 4947811 - 4947887
Alignment:
Q  1080 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgca-ttgttcatatcaactgagctaaactca 1155  Q
    |||| ||||||| ||||||||||||||| |||||| |||||| ||||||| |||||| || ||||| |||||||||||    
T  4947811 tttttgtggtggtcggggttcaaaccccagaccttacatatt-ttatgcatttgttcctaccaactaagctaaactca 4947887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Complemental strand, 7827589 - 7827509
Alignment:
Q  1075 ttttcttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| |||| ||||||| |||| ||| ||| || |||||| ||||| |||||||||||| ||||||||||||| ||||||||    
T  7827589 ttttttttttgtggtggtcgggtttcgaactccagaccttacatat-attatgcattgtccatatcaactgagttaaactca 7827509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1094 - 1155
Target Start/End: Complemental strand, 10617615 - 10617554
Alignment:
Q  1094 gggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||| |||||| ||||||| ||||  ||||||||| | ||||||||||||||||| ||||    
T  10617615 gggttcgaaccccagaccttgtatatatttatgcattatccatatcaactgagctaagctca 10617554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1093 - 1150
Target Start/End: Complemental strand, 13337091 - 13337034
Alignment:
Q  1093 ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    ||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  13337091 ggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 13337034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1080 - 1157
Target Start/End: Original strand, 25505687 - 25505763
Alignment:
Q  1080 ttttggtggtggcggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactcatg 1157  Q
    ||||||||||| | |||||| |||||| ||||||||||| ||||||||||||| | ||  ||||||| ||| ||||||    
T  25505687 ttttggtggtgtccgggttcgaaccccagaccttgcata-tattatgcattgtccttacaaactgagttaagctcatg 25505763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1093 - 1150
Target Start/End: Original strand, 35191816 - 35191872
Alignment:
Q  1093 ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    ||||||| |||||| ||||||||||| ||||||||||||| | || ||||||||||||    
T  35191816 ggggttcgaaccccagaccttgcata-tattatgcattgtccttaccaactgagctaa 35191872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1108 - 1153
Target Start/End: Original strand, 39100098 - 39100142
Alignment:
Q  1108 gaccttgcatattattatgcattgttcatatcaactgagctaaact 1153  Q
    |||||||||||| ||||||||||||| ||| |||||||||||||||    
T  39100098 gaccttgcatat-attatgcattgtttataacaactgagctaaact 39100142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1094 - 1155
Target Start/End: Original strand, 43316600 - 43316661
Alignment:
Q  1094 gggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||||| ||||| |||||||||||||  ||||||||| |  |||||||||||||||| ||||    
T  43316600 gggttcgaacccgcgaccttgcatatatttatgcattatctatatcaactgagctaagctca 43316661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1093 - 1150
Target Start/End: Complemental strand, 45096088 - 45096032
Alignment:
Q  1093 ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    ||||||| |||| | |||||||||||| |||||||||||| | |||||||||||||||    
T  45096088 ggggttcgaaccacagaccttgcatat-attatgcattgtccttatcaactgagctaa 45096032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1093 - 1150
Target Start/End: Complemental strand, 50739145 - 50739088
Alignment:
Q  1093 ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    ||||||| ||||| |||||||||||||  |||||||||||  ||||||| ||||||||    
T  50739145 ggggttcgaacccgcgaccttgcatatatttatgcattgtctatatcaaatgagctaa 50739088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1093 - 1150
Target Start/End: Original strand, 50773710 - 50773767
Alignment:
Q  1093 ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    ||||||| ||||| |||||||||||||  |||||||||||  ||||||| ||||||||    
T  50773710 ggggttcgaacccgcgaccttgcatatatttatgcattgtctatatcaaatgagctaa 50773767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1120 - 1153
Target Start/End: Original strand, 51402738 - 51402771
Alignment:
Q  1120 tattatgcattgttcatatcaactgagctaaact 1153  Q
    ||||||||||||| ||||||||||||||||||||    
T  51402738 tattatgcattgtccatatcaactgagctaaact 51402771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 35; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1080 - 1153
Target Start/End: Complemental strand, 5489 - 5416
Alignment:
Q  1080 ttttggtggtgg-cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaact 1153  Q
    |||||||||||| ||||| || |||||| ||||||||||||| ||||||||||| |||| |||| ||||||||||    
T  5489 ttttggtggtggtcggggatcgaaccccagaccttgcatatt-ttatgcattgtccataccaaccgagctaaact 5416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 33; Significance: 0.000000007; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1080 - 1155
Target Start/End: Complemental strand, 37611 - 37536
Alignment:
Q  1080 ttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||| ||||||| ||| ||| |||||| ||||||||||||| |||||||||||||||| ||||| |||||| ||||    
T  37611 ttttgatggtggccgggattcgaaccccggaccttgcatatt-ttatgcattgttcataccaacttagctaagctca 37536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1074 - 1155
Target Start/End: Complemental strand, 7062 - 6980
Alignment:
Q  1074 attttcttttggtggtggcgggg-ttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||| |||| |||||||| ||| ||| |||||| |||||| |||||||||||||||||| |||| |||| |||  |||||||    
T  7062 attttttttttgtggtggccgggattcgaaccccagaccttacatattattatgcattgtccataccaaccgagtcaaactca 6980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1109 - 1155
Target Start/End: Original strand, 14201 - 14246
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||||||||| ||||||||||||||||| |||||||| ||||||||    
T  14201 accttgcatat-attatgcattgttcataccaactgagttaaactca 14246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1108 - 1162
Target Start/End: Original strand, 47255 - 47308
Alignment:
Q  1108 gaccttgcatattattatgcattgttcatatcaactgagctaaactcatgaaaac 1162  Q
    ||||||||||||| ||||||||||| |||| |||||||||||| |||| ||||||    
T  47255 gaccttgcatatt-ttatgcattgtccataccaactgagctaagctcacgaaaac 47308  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1092 - 1150
Target Start/End: Original strand, 138112 - 138170
Alignment:
Q  1092 cggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaa 1150  Q
    |||||||| ||||| |||||||||||||  |||| ||||||  ||||||||||||||||    
T  138112 cggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaa 138170  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1108 - 1146
Target Start/End: Original strand, 189604 - 189642
Alignment:
Q  1108 gaccttgcatattattatgcattgttcatatcaactgag 1146  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  189604 gaccttgcatattattatgcattgtccataccaactgag 189642  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1109 - 1155
Target Start/End: Complemental strand, 244526 - 244480
Alignment:
Q  1109 accttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    ||||| |||||| ||||||||||| ||||||||||||||||| ||||    
T  244526 accttacatatttttatgcattgtccatatcaactgagctaagctca 244480  T

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Target: scaffold0180 (Bit Score: 30; Significance: 0.0000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1075 - 1155
Target Start/End: Complemental strand, 17812 - 17733
Alignment:
Q  1075 ttttcttttggtggtggc-ggggttcaaacccccgaccttgcatattattatgcattgttcatatcaactgagctaaactca 1155  Q
    |||| ||||||||||||| ||||||  |||||  |||||||||| | |||||||||||| |||| |||||||||||||||||    
T  17812 tttttttttggtggtggctggggtttgaacccg-gaccttgcatgt-attatgcattgtccataccaactgagctaaactca 17733  T

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