View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21579_high_5 (Length: 297)
Name: NF21579_high_5
Description: NF21579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21579_high_5 |
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Alignment Details
Target: chr4 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 8 - 279
Target Start/End: Complemental strand, 16734831 - 16734560
Alignment:
| Q |
8 |
agagaagaaactaatatttaaatttggttgttaatatatacctaacaattatgctatgatttctcatgaaaatgattgtgtagggtaaagggtacacatc |
107 |
Q |
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| T |
16734831 |
agagaagaaactaatatttaaatttggttgttaatatatacctaacaattatgctatgatttctcatgaaaatgattgtgtagggtaaagggtacacatc |
16734732 |
T |
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| Q |
108 |
atcagaaaatcactcagagttgctgcatatgaatgataagcatgaatttggatttaatgaaaagaatgttgattgcatagacttgaagcaaagagggatt |
207 |
Q |
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| T |
16734731 |
atctgaaaatcactcagagttgctgcatatgaatgataagcatgaatttggatttaatgaaaagaatgttgattgcatagacttgaagcaaagagggatt |
16734632 |
T |
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| Q |
208 |
tgcttggttcctttgtctttgttggttaattatttagggtgatcatgactgatatttttgtctatatcctct |
279 |
Q |
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| T |
16734631 |
tgcttggttcctttgtctttgttggttaattatttagggtgatcatgactgatatttttgtctatatcctct |
16734560 |
T |
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