View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21580_high_27 (Length: 385)

Name: NF21580_high_27
Description: NF21580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21580_high_27
NF21580_high_27
[»] scaffold0347 (2 HSPs)
scaffold0347 (121-293)||(13607-13779)
scaffold0347 (149-289)||(14551-14691)
[»] chr7 (57 HSPs)
chr7 (121-291)||(38643550-38643720)
chr7 (159-293)||(38644628-38644762)
chr7 (151-291)||(4227132-4227272)
chr7 (155-291)||(12643100-12643236)
chr7 (155-290)||(12644097-12644232)
chr7 (149-291)||(45915766-45915908)
chr7 (155-291)||(4226125-4226261)
chr7 (155-291)||(45914526-45914660)
chr7 (159-291)||(47558030-47558162)
chr7 (191-291)||(7158231-7158331)
chr7 (191-291)||(12930772-12930872)
chr7 (292-366)||(6361870-6361944)
chr7 (155-291)||(27479987-27480123)
chr7 (191-291)||(12929287-12929387)
chr7 (214-291)||(37284109-37284186)
chr7 (155-284)||(22661364-22661493)
chr7 (214-291)||(37289333-37289410)
chr7 (150-200)||(24388910-24388960)
chr7 (147-200)||(3914229-3914282)
chr7 (155-200)||(17102111-17102156)
chr7 (155-200)||(27396887-27396932)
chr7 (155-200)||(27991830-27991875)
chr7 (147-200)||(28469292-28469345)
chr7 (155-200)||(30948421-30948466)
chr7 (147-200)||(32053427-32053480)
chr7 (155-200)||(32680856-32680901)
chr7 (147-200)||(40379860-40379913)
chr7 (147-200)||(42731510-42731563)
chr7 (175-291)||(27480731-27480847)
chr7 (214-284)||(31695637-31695707)
chr7 (147-200)||(10935885-10935938)
chr7 (155-200)||(32298997-32299042)
chr7 (155-200)||(34928911-34928956)
chr7 (155-200)||(39686795-39686840)
chr7 (147-200)||(45010689-45010742)
chr7 (155-200)||(45010896-45010941)
chr7 (153-205)||(13311323-13311375)
chr7 (156-200)||(22871570-22871614)
chr7 (153-233)||(47559026-47559106)
chr7 (155-214)||(17886782-17886841)
chr7 (191-270)||(27558136-27558215)
chr7 (159-200)||(2640474-2640515)
chr7 (155-200)||(6253562-6253607)
chr7 (159-200)||(6571104-6571145)
chr7 (191-276)||(7159213-7159297)
chr7 (155-200)||(19204580-19204625)
chr7 (159-200)||(23181290-23181331)
chr7 (149-200)||(5457193-5457244)
chr7 (147-194)||(37656949-37656996)
chr7 (214-284)||(40022552-40022621)
chr7 (224-277)||(12929461-12929514)
chr7 (155-200)||(15714584-15714629)
chr7 (155-212)||(32688510-32688567)
chr7 (147-200)||(42019881-42019934)
chr7 (155-200)||(43124444-43124489)
chr7 (153-205)||(11400259-11400311)
chr7 (216-284)||(31694478-31694546)
[»] chr1 (72 HSPs)
chr1 (121-284)||(25064940-25065103)
chr1 (149-284)||(25065916-25066051)
chr1 (155-291)||(13295135-13295271)
chr1 (155-292)||(46282070-46282207)
chr1 (151-284)||(46282753-46282886)
chr1 (191-290)||(2829539-2829645)
chr1 (191-284)||(6344262-6344355)
chr1 (147-200)||(24009825-24009878)
chr1 (191-284)||(32619391-32619484)
chr1 (191-291)||(2828193-2828293)
chr1 (155-291)||(49093041-49093177)
chr1 (214-293)||(51935222-51935301)
chr1 (149-215)||(34850351-34850417)
chr1 (179-284)||(6345625-6345730)
chr1 (147-200)||(6367653-6367706)
chr1 (204-277)||(32622369-32622442)
chr1 (147-200)||(32917351-32917404)
chr1 (150-215)||(34849087-34849152)
chr1 (147-200)||(40210654-40210707)
chr1 (219-291)||(13295608-13295680)
chr1 (154-205)||(10304009-10304060)
chr1 (147-229)||(13914351-13914433)
chr1 (155-201)||(31514578-31514624)
chr1 (147-201)||(37578476-37578530)
chr1 (155-200)||(183483-183528)
chr1 (147-200)||(4960631-4960684)
chr1 (147-200)||(17662134-17662187)
chr1 (155-200)||(24905428-24905473)
chr1 (155-200)||(25647975-25648020)
chr1 (155-200)||(28011454-28011499)
chr1 (155-200)||(33442855-33442900)
chr1 (155-200)||(42248564-42248609)
chr1 (175-284)||(50062932-50063041)
chr1 (156-208)||(16970828-16970880)
chr1 (154-205)||(10304146-10304197)
chr1 (147-229)||(19017913-19017995)
chr1 (147-205)||(21444680-21444738)
chr1 (147-205)||(22103790-22103848)
chr1 (214-284)||(32238706-32238776)
chr1 (147-205)||(42267389-42267447)
chr1 (155-253)||(49093777-49093875)
chr1 (155-229)||(52134130-52134204)
chr1 (159-200)||(1103552-1103593)
chr1 (147-200)||(1841550-1841603)
chr1 (155-200)||(4716729-4716774)
chr1 (147-228)||(13245913-13245994)
chr1 (159-200)||(14879062-14879103)
chr1 (155-200)||(26024514-26024559)
chr1 (147-200)||(30711418-30711471)
chr1 (147-200)||(34464733-34464786)
chr1 (147-200)||(41098824-41098877)
chr1 (147-200)||(43758913-43758966)
chr1 (155-200)||(47999384-47999429)
chr1 (156-200)||(19515910-19515954)
chr1 (156-200)||(36694541-36694585)
chr1 (156-200)||(36710642-36710686)
chr1 (156-200)||(40772598-40772642)
chr1 (191-262)||(10019657-10019728)
chr1 (156-198)||(23209620-23209662)
chr1 (147-205)||(27999135-27999193)
chr1 (158-200)||(35152434-35152476)
chr1 (214-284)||(52563658-52563728)
chr1 (211-291)||(28534817-28534896)
chr1 (149-197)||(48691242-48691290)
chr1 (191-270)||(33347700-33347779)
chr1 (191-270)||(49002897-49002976)
chr1 (191-293)||(2953748-2953850)
chr1 (147-200)||(44523420-44523473)
chr1 (159-200)||(46163121-46163162)
chr1 (147-200)||(48779208-48779261)
chr1 (155-248)||(50062246-50062339)
chr1 (222-270)||(49003190-49003238)
[»] chr2 (50 HSPs)
chr2 (151-293)||(25624393-25624535)
chr2 (155-292)||(25623287-25623424)
chr2 (191-291)||(24387351-24387451)
chr2 (190-291)||(24388255-24388356)
chr2 (214-291)||(20101770-20101847)
chr2 (155-291)||(29957817-29957953)
chr2 (155-293)||(20983225-20983363)
chr2 (147-200)||(15848179-15848232)
chr2 (214-291)||(20103167-20103244)
chr2 (147-200)||(37895631-37895684)
chr2 (191-291)||(20982524-20982624)
chr2 (155-293)||(29958511-29958649)
chr2 (155-200)||(6657969-6658014)
chr2 (155-200)||(14900744-14900789)
chr2 (155-200)||(16099146-16099191)
chr2 (191-284)||(19620793-19620886)
chr2 (155-200)||(33739794-33739839)
chr2 (147-200)||(36382252-36382305)
chr2 (147-200)||(39423606-39423659)
chr2 (155-200)||(39498401-39498446)
chr2 (147-200)||(44714045-44714098)
chr2 (156-200)||(11163316-11163360)
chr2 (147-205)||(11689627-11689685)
chr2 (147-200)||(2318249-2318302)
chr2 (147-200)||(10712814-10712867)
chr2 (155-200)||(13995934-13995979)
chr2 (155-200)||(33062311-33062356)
chr2 (147-200)||(34447904-34447956)
chr2 (147-200)||(36479809-36479862)
chr2 (147-200)||(36755184-36755237)
chr2 (155-200)||(41248820-41248865)
chr2 (154-205)||(17266484-17266535)
chr2 (218-284)||(7983837-7983903)
chr2 (147-205)||(10840562-10840620)
chr2 (147-205)||(11721374-11721432)
chr2 (214-284)||(33882895-33882965)
chr2 (218-284)||(43236511-43236577)
chr2 (159-200)||(1696005-1696046)
chr2 (191-268)||(28599450-28599527)
chr2 (147-215)||(3653364-3653432)
chr2 (156-200)||(45556203-45556247)
chr2 (155-198)||(6846877-6846920)
chr2 (159-200)||(6573137-6573178)
chr2 (147-200)||(6577561-6577614)
chr2 (191-268)||(9694026-9694103)
chr2 (147-200)||(22051278-22051330)
chr2 (155-200)||(25892485-25892530)
chr2 (151-183)||(3122664-3122696)
chr2 (218-270)||(7981068-7981120)
chr2 (191-291)||(43681856-43681956)
[»] chr5 (74 HSPs)
chr5 (155-291)||(22870426-22870562)
chr5 (155-284)||(22869612-22869741)
chr5 (155-291)||(20856932-20857068)
chr5 (151-284)||(36476772-36476905)
chr5 (155-284)||(36477340-36477469)
chr5 (191-291)||(14744730-14744830)
chr5 (155-291)||(20857511-20857647)
chr5 (210-291)||(31107931-31108012)
chr5 (214-291)||(8654107-8654184)
chr5 (155-291)||(20072833-20072969)
chr5 (191-291)||(21978971-21979071)
chr5 (155-293)||(20072119-20072257)
chr5 (155-293)||(39181760-39181898)
chr5 (147-200)||(35512239-35512292)
chr5 (138-284)||(16532900-16533046)
chr5 (147-200)||(5024302-5024355)
chr5 (191-284)||(21978017-21978110)
chr5 (191-284)||(31108338-31108430)
chr5 (147-200)||(32242333-32242386)
chr5 (147-200)||(38442159-38442212)
chr5 (175-291)||(39181057-39181173)
chr5 (138-292)||(16533572-16533726)
chr5 (154-200)||(38475290-38475336)
chr5 (155-200)||(297275-297320)
chr5 (155-200)||(3529134-3529179)
chr5 (147-200)||(5993980-5994033)
chr5 (155-200)||(6758126-6758171)
chr5 (148-205)||(14848992-14849049)
chr5 (155-200)||(41930607-41930652)
chr5 (156-200)||(28269681-28269725)
chr5 (156-200)||(28771131-28771175)
chr5 (156-200)||(31482664-31482708)
chr5 (158-200)||(14194718-14194760)
chr5 (150-200)||(24547412-24547462)
chr5 (155-200)||(1506058-1506103)
chr5 (159-200)||(8322495-8322536)
chr5 (207-284)||(8673774-8673851)
chr5 (147-200)||(11047528-11047581)
chr5 (147-200)||(13362512-13362565)
chr5 (147-200)||(13962955-13963008)
chr5 (147-200)||(19892592-19892645)
chr5 (147-200)||(20840624-20840677)
chr5 (155-200)||(27587239-27587284)
chr5 (159-200)||(29646658-29646699)
chr5 (159-200)||(35920480-35920521)
chr5 (159-200)||(39453391-39453432)
chr5 (156-200)||(6150545-6150589)
chr5 (150-205)||(15644999-15645054)
chr5 (191-270)||(21260886-21260965)
chr5 (214-277)||(21972104-21972166)
chr5 (147-205)||(12904840-12904898)
chr5 (154-200)||(16083068-16083114)
chr5 (191-253)||(39402148-39402210)
chr5 (147-200)||(186510-186563)
chr5 (155-200)||(11761840-11761885)
chr5 (147-200)||(16157139-16157192)
chr5 (147-200)||(17202490-17202543)
chr5 (147-200)||(18247175-18247228)
chr5 (147-200)||(20814419-20814472)
chr5 (156-200)||(18670290-18670334)
chr5 (191-262)||(8323085-8323156)
chr5 (191-270)||(14745469-14745548)
chr5 (191-290)||(18934714-18934813)
chr5 (191-290)||(25253087-25253186)
chr5 (191-290)||(25316877-25316976)
chr5 (147-201)||(14194513-14194567)
chr5 (224-277)||(12990912-12990965)
chr5 (224-277)||(13064533-13064586)
chr5 (147-200)||(40150098-40150151)
chr5 (161-205)||(14848825-14848869)
chr5 (191-291)||(25253370-25253470)
chr5 (191-291)||(25317161-25317261)
chr5 (147-187)||(27937303-27937343)
chr5 (191-291)||(32052508-32052608)
[»] chr4 (67 HSPs)
chr4 (155-291)||(23455653-23455789)
chr4 (155-291)||(23454954-23455090)
chr4 (155-284)||(38982560-38982689)
chr4 (191-291)||(53477080-53477180)
chr4 (200-293)||(54591587-54591680)
chr4 (155-291)||(56556582-56556718)
chr4 (155-290)||(56557289-56557424)
chr4 (155-293)||(38813552-38813690)
chr4 (216-291)||(13336863-13336938)
chr4 (155-229)||(4982987-4983061)
chr4 (147-229)||(14801798-14801880)
chr4 (214-284)||(54590150-54590220)
chr4 (147-200)||(34765664-34765717)
chr4 (155-291)||(38814291-38814427)
chr4 (155-291)||(52816387-52816523)
chr4 (147-201)||(16605692-16605746)
chr4 (147-201)||(24349764-24349818)
chr4 (154-200)||(44967329-44967375)
chr4 (147-193)||(53129790-53129836)
chr4 (155-200)||(9145027-9145072)
chr4 (155-200)||(13058128-13058173)
chr4 (155-200)||(23613400-23613445)
chr4 (155-200)||(27934623-27934668)
chr4 (147-200)||(35028282-35028335)
chr4 (155-200)||(36009105-36009150)
chr4 (155-200)||(42738292-42738337)
chr4 (155-200)||(43155788-43155833)
chr4 (155-200)||(49879468-49879513)
chr4 (148-205)||(52298112-52298169)
chr4 (147-200)||(53701903-53701956)
chr4 (216-284)||(22882352-22882420)
chr4 (216-284)||(22934016-22934084)
chr4 (155-291)||(52815663-52815799)
chr4 (191-291)||(55013089-55013188)
chr4 (147-197)||(17356206-17356256)
chr4 (149-211)||(48528552-48528614)
chr4 (155-200)||(5369038-5369083)
chr4 (155-200)||(9400780-9400825)
chr4 (147-200)||(15507957-15508010)
chr4 (155-200)||(18831440-18831485)
chr4 (155-200)||(22566890-22566935)
chr4 (155-200)||(24711202-24711247)
chr4 (155-200)||(32950233-32950278)
chr4 (155-200)||(33247534-33247579)
chr4 (155-200)||(34837335-34837380)
chr4 (147-200)||(37976437-37976490)
chr4 (159-200)||(50418933-50418974)
chr4 (147-200)||(52909344-52909397)
chr4 (149-205)||(48529862-48529918)
chr4 (221-284)||(9254413-9254476)
chr4 (157-200)||(37248327-37248370)
chr4 (150-205)||(41583518-41583573)
chr4 (147-201)||(10781768-10781822)
chr4 (154-200)||(16005929-16005975)
chr4 (155-200)||(38012261-38012306)
chr4 (156-200)||(35508533-35508577)
chr4 (160-200)||(54086992-54087032)
chr4 (150-205)||(40387553-40387608)
chr4 (222-277)||(50246173-50246228)
chr4 (147-205)||(7280390-7280448)
chr4 (147-201)||(14802019-14802073)
chr4 (224-277)||(22249940-22249993)
chr4 (147-200)||(24411449-24411502)
chr4 (159-200)||(51692644-51692685)
chr4 (155-200)||(55867406-55867451)
chr4 (155-211)||(8439516-8439572)
chr4 (147-199)||(54435381-54435433)
[»] chr3 (58 HSPs)
chr3 (155-291)||(32717069-32717205)
chr3 (138-284)||(29192042-29192188)
chr3 (159-291)||(29192961-29193093)
chr3 (155-291)||(2943913-2944049)
chr3 (155-284)||(37249206-37249335)
chr3 (155-255)||(32716285-32716385)
chr3 (155-284)||(37249762-37249890)
chr3 (191-291)||(22736690-22736790)
chr3 (155-293)||(45279248-45279386)
chr3 (191-284)||(44481953-44482046)
chr3 (155-291)||(48189063-48189199)
chr3 (147-200)||(23458263-23458316)
chr3 (155-291)||(2944630-2944766)
chr3 (155-265)||(1756576-1756686)
chr3 (175-293)||(11026616-11026734)
chr3 (147-229)||(33689663-33689745)
chr3 (155-277)||(48188392-48188514)
chr3 (155-284)||(45278551-45278680)
chr3 (191-291)||(1757304-1757404)
chr3 (147-205)||(41988048-41988106)
chr3 (150-200)||(51994173-51994223)
chr3 (155-200)||(2796270-2796315)
chr3 (155-200)||(8041707-8041752)
chr3 (155-200)||(10770752-10770797)
chr3 (147-200)||(26463882-26463935)
chr3 (147-200)||(33156278-33156331)
chr3 (155-200)||(36314559-36314604)
chr3 (147-200)||(40758235-40758288)
chr3 (155-200)||(48322638-48322683)
chr3 (155-200)||(54466514-54466559)
chr3 (214-277)||(44476063-44476126)
chr3 (175-277)||(43105818-43105920)
chr3 (159-200)||(9294254-9294295)
chr3 (155-200)||(19741184-19741229)
chr3 (156-200)||(46474906-46474950)
chr3 (147-201)||(9367831-9367885)
chr3 (191-277)||(21255815-21255901)
chr3 (147-205)||(30380932-30380990)
chr3 (147-205)||(39399376-39399434)
chr3 (154-200)||(40033747-40033793)
chr3 (147-205)||(54317915-54317973)
chr3 (156-253)||(11025975-11026072)
chr3 (159-200)||(43384374-43384415)
chr3 (155-200)||(55052540-55052585)
chr3 (191-291)||(1741387-1741487)
chr3 (147-205)||(4521765-4521824)
chr3 (150-205)||(44654790-44654845)
chr3 (147-205)||(20704611-20704669)
chr3 (160-205)||(20704516-20704561)
chr3 (224-277)||(21300340-21300393)
chr3 (159-200)||(40506083-40506124)
chr3 (155-215)||(42854511-42854569)
chr3 (204-265)||(43105259-43105320)
chr3 (189-262)||(46670537-46670610)
chr3 (189-270)||(55036690-55036771)
chr3 (155-215)||(21185987-21186047)
chr3 (191-247)||(22735403-22735459)
chr3 (147-211)||(23458059-23458123)
[»] chr8 (66 HSPs)
chr8 (191-290)||(1231527-1231626)
chr8 (155-291)||(34213764-34213900)
chr8 (191-279)||(7393145-7393233)
chr8 (191-291)||(25288076-25288176)
chr8 (191-291)||(38598964-38599064)
chr8 (214-291)||(33497639-33497716)
chr8 (191-291)||(1232799-1232897)
chr8 (155-291)||(34665770-34665906)
chr8 (151-291)||(34214488-34214629)
chr8 (191-293)||(24377179-24377281)
chr8 (147-200)||(16388810-16388863)
chr8 (147-200)||(36928567-36928620)
chr8 (147-199)||(31608797-31608849)
chr8 (214-284)||(24379019-24379089)
chr8 (207-277)||(33497030-33497100)
chr8 (154-200)||(38862709-38862755)
chr8 (155-200)||(1425314-1425359)
chr8 (155-200)||(3041717-3041762)
chr8 (191-284)||(4970132-4970225)
chr8 (147-200)||(13186151-13186204)
chr8 (155-200)||(23663806-23663851)
chr8 (147-200)||(35756673-35756726)
chr8 (147-200)||(36186351-36186404)
chr8 (155-200)||(36325325-36325370)
chr8 (155-200)||(38845560-38845605)
chr8 (147-200)||(39071767-39071820)
chr8 (155-200)||(40775911-40775956)
chr8 (155-200)||(44407118-44407163)
chr8 (220-291)||(4463455-4463526)
chr8 (154-201)||(12199210-12199257)
chr8 (154-201)||(12443638-12443685)
chr8 (214-284)||(29574749-29574819)
chr8 (155-265)||(34666505-34666614)
chr8 (155-200)||(2266583-2266628)
chr8 (147-200)||(4405944-4405997)
chr8 (155-200)||(8316880-8316925)
chr8 (155-200)||(22915650-22915695)
chr8 (159-200)||(23698540-23698581)
chr8 (156-200)||(35449871-35449915)
chr8 (157-200)||(12273147-12273190)
chr8 (191-249)||(7392250-7392308)
chr8 (224-294)||(27436560-27436630)
chr8 (147-205)||(31873183-31873241)
chr8 (154-200)||(38955794-38955840)
chr8 (151-200)||(2534786-2534835)
chr8 (155-200)||(11674786-11674830)
chr8 (147-200)||(40318248-40318301)
chr8 (155-215)||(8747556-8747616)
chr8 (147-199)||(22890278-22890330)
chr8 (147-205)||(11291195-11291253)
chr8 (147-205)||(24085860-24085918)
chr8 (218-284)||(36574824-36574890)
chr8 (224-277)||(547642-547695)
chr8 (151-200)||(2535838-2535887)
chr8 (163-200)||(4994957-4994994)
chr8 (191-268)||(9632351-9632428)
chr8 (224-293)||(27437552-27437621)
chr8 (151-200)||(34177258-34177307)
chr8 (224-277)||(36623560-36623613)
chr8 (224-277)||(37342989-37343042)
chr8 (224-277)||(43866835-43866888)
chr8 (148-228)||(9499883-9499962)
chr8 (222-270)||(26740033-26740081)
chr8 (216-284)||(29575910-29575978)
chr8 (149-201)||(30712003-30712055)
chr8 (149-201)||(30719780-30719832)
[»] scaffold0009 (2 HSPs)
scaffold0009 (191-291)||(261001-261101)
scaffold0009 (189-291)||(262439-262541)
[»] chr6 (35 HSPs)
chr6 (151-291)||(4117507-4117647)
chr6 (156-291)||(14656480-14656615)
chr6 (153-291)||(4116799-4116937)
chr6 (191-291)||(17784385-17784485)
chr6 (191-291)||(33401126-33401226)
chr6 (214-284)||(8427388-8427458)
chr6 (155-293)||(33399964-33400102)
chr6 (175-277)||(1661414-1661516)
chr6 (155-291)||(14657173-14657309)
chr6 (147-200)||(12080727-12080780)
chr6 (147-200)||(21627997-21628050)
chr6 (155-200)||(28000646-28000691)
chr6 (155-200)||(30337540-30337585)
chr6 (147-200)||(30803952-30804005)
chr6 (147-200)||(33517625-33517678)
chr6 (147-205)||(1215150-1215208)
chr6 (147-229)||(30725821-30725903)
chr6 (147-229)||(33647025-33647107)
chr6 (155-200)||(363091-363136)
chr6 (147-200)||(3059348-3059401)
chr6 (155-200)||(14196876-14196921)
chr6 (155-200)||(17734455-17734500)
chr6 (149-215)||(26463255-26463321)
chr6 (147-205)||(33648749-33648807)
chr6 (222-294)||(738012-738084)
chr6 (194-294)||(8427197-8427297)
chr6 (191-291)||(15819774-15819874)
chr6 (147-215)||(24210607-24210675)
chr6 (191-290)||(3299843-3299942)
chr6 (224-294)||(3299749-3299819)
chr6 (224-270)||(19296441-19296487)
chr6 (155-200)||(25486189-25486232)
chr6 (147-200)||(11392929-11392982)
chr6 (191-291)||(5064335-5064435)
chr6 (222-270)||(9607631-9607679)
[»] scaffold1493 (1 HSPs)
scaffold1493 (191-291)||(593-693)
[»] scaffold0182 (2 HSPs)
scaffold0182 (210-291)||(14396-14477)
scaffold0182 (214-291)||(13134-13211)
[»] scaffold0018 (1 HSPs)
scaffold0018 (191-292)||(73108-73209)
[»] scaffold0005 (2 HSPs)
scaffold0005 (147-229)||(37847-37929)
scaffold0005 (147-201)||(37654-37708)
[»] scaffold0031 (1 HSPs)
scaffold0031 (147-200)||(69056-69109)
[»] scaffold0020 (1 HSPs)
scaffold0020 (155-201)||(139762-139808)
[»] scaffold0559 (1 HSPs)
scaffold0559 (155-200)||(1324-1369)
[»] scaffold0024 (1 HSPs)
scaffold0024 (155-200)||(141855-141900)
[»] scaffold0007 (1 HSPs)
scaffold0007 (155-200)||(1860-1905)
[»] scaffold0205 (1 HSPs)
scaffold0205 (155-200)||(21230-21275)
[»] scaffold0295 (1 HSPs)
scaffold0295 (156-200)||(2234-2278)
[»] scaffold0279 (1 HSPs)
scaffold0279 (191-270)||(10874-10953)
[»] scaffold0008 (1 HSPs)
scaffold0008 (149-200)||(239837-239888)


Alignment Details
Target: scaffold0347 (Bit Score: 133; Significance: 5e-69; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 121 - 293
Target Start/End: Complemental strand, 13779 - 13607
Alignment:
Q  121 gtcaacacaacccctaatttgctgacttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgg 220  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||    
T  13779 gtcaacacaacccctaatttgctgacttagtgacgtggtagtgattaagtggggagagggacgaaatcttaaatgattaatttttataggggcaaaatgg 13680  T
Q  221 gaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagccaa 293  Q
     |||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  13679 aaggattagtaagctcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagccaa 13607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 149 - 289
Target Start/End: Original strand, 14551 - 14691
Alignment:
Q  149 agtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaa 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||    
T  14551 agtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttataggggcaaaatgggaggattagtaagctcagggatgaaaaa 14650  T
Q  249 tcaaatgacctataattgcaggaatgaaatgcatatgtaag 289  Q
    ||||||| |||||||||| ||||||||||||||||| ||||    
T  14651 tcaaatggcctataattgaaggaatgaaatgcatatttaag 14691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 4e-63; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 121 - 291
Target Start/End: Complemental strand, 38643720 - 38643550
Alignment:
Q  121 gtcaacacaacccctaatttgctgacttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgg 220  Q
    ||||||||||||||||||||||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||| | | |||||||    
T  38643720 gtcaacacaacccctaatttgctgaattagtgacgtgacagtaattaagtggggagagggacgaaatcttaaatgattaatttttacaggagcaaaatgg 38643621  T
Q  221 gaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    ||||||||||||| ||| ||||||||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  38643620 gaggattagtaaggtcaaggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagcc 38643550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 159 - 293
Target Start/End: Original strand, 38644628 - 38644762
Alignment:
Q  159 cagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacc 258  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||||| |||||| | |||| |||||||||||||||    
T  38644628 cagtgattaagtggggagagggatgaaatcttaaatgattaatttttacaaggtcaaaatggaaggattaataagcttagggataaaaaatcaaatgacc 38644727  T
Q  259 tataattgcaggaatgaaatgcatatgtaagccaa 293  Q
    |||||||||| ||||||||||||||| ||||||||    
T  38644728 tataattgcaagaatgaaatgcatatttaagccaa 38644762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 151 - 291
Target Start/End: Original strand, 4227132 - 4227272
Alignment:
Q  151 tgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatc 250  Q
    ||||||||||||||||||  ||  ||||||||||||| ||||||| |||||||||||| ||  |||||||||||||||||||||||| ||||||||||||    
T  4227132 tgatgtggcagtgattaaccggaaagagggacgaaattttaaatggttaatttttacagggacaaaatgggaggattagtaagctcaaggatgaaaaatc 4227231  T
Q  251 aaatgacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    ||||| ||||||||| |||| ||||||||||||| ||||||    
T  4227232 aaatggcctataattacagggatgaaatgcatatttaagcc 4227272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 12643236 - 12643100
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    ||||||||||||||  ||| ||||||||||||| ||||||| ||||||||| || ||||||||||||||||||||||||||||  |||||||||||||||    
T  12643236 gtggcagtgattaatcgggaagagggacgaaattttaaatggttaatttttgcaggggtaaaatgggaggattagtaagctcagagatgaaaaatcaaat 12643137  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    | ||||||||| |||| ||||||||||||| ||||||    
T  12643136 ggcctataattacagggatgaaatgcatatttaagcc 12643100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 155 - 290
Target Start/End: Original strand, 12644097 - 12644232
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    ||||||||||||||  ||| ||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||    
T  12644097 gtggcagtgattaaccgggaagagggacgaaattttaaatgattaatttttacaggagtaaaatgggaggattagtaagctcagggatgaaaaatcaaat 12644196  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    | ||| |||||  ||| ||||||||||||| |||||    
T  12644197 ggcctgtaattatagggatgaaatgcatatttaagc 12644232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 149 - 291
Target Start/End: Original strand, 45915766 - 45915908
Alignment:
Q  149 agtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaa 248  Q
    ||||| ||||||||||||||  ||  ||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||||||||| | ||||||||||    
T  45915766 agtgacgtggcagtgattaatcggaaagagggacggaattttaaatgattaatttttacaggggtaaaataggaggattagtaagcttagggatgaaaaa 45915865  T
Q  249 tcaaatgacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    ||||||| ||||||||| |||| ||||||||||||| ||||||    
T  45915866 tcaaatggcctataattacagggatgaaatgcatatttaagcc 45915908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 4226261 - 4226125
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    ||||||||||||||  ||| ||| ||||||||| |||||||||||||||||||| ||| ||||||| ||||||||||||||||||| |||| ||||||||    
T  4226261 gtggcagtgattaaccgggaagaaggacgaaattttaaatgattaatttttacaggggcaaaatggaaggattagtaagctcatggttgaagaatcaaat 4226162  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    | ||||||||| |||| ||||||||||||| ||||||    
T  4226161 ggcctataattacagggatgaaatgcatatttaagcc 4226125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 45914660 - 45914526
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    ||||||||||||||  ||| ||||||||||||| |||||||||||||||||||| ||| |||||| ||| ||||||||||| | ||||||||||||||||    
T  45914660 gtggcagtgattaatcgggaagagggacgaaattttaaatgattaatttttaca-gggcaaaatgagag-attagtaagcttagggatgaaaaatcaaat 45914563  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    | ||||||||| |||  ||||||||||||| ||||||    
T  45914562 ggcctataattacagagatgaaatgcatatttaagcc 45914526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 159 - 291
Target Start/End: Complemental strand, 47558162 - 47558030
Alignment:
Q  159 cagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacc 258  Q
    ||||||||||  ||| ||||||||||||| ||||||| |||||||||||| ||| ||||||||||||||||||| |||| ||||||||||||||||  ||    
T  47558162 cagtgattaatcgggaagagggacgaaattttaaatggttaatttttacaggggcaaaatgggaggattagtaaactcagggatgaaaaatcaaatagcc 47558063  T
Q  259 tataattgcaggaatgaaatgcatatgtaagcc 291  Q
    |||||||  ||  ||||||||||||| ||||||    
T  47558062 tataattaaagagatgaaatgcatatttaagcc 47558030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 7158331 - 7158231
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||||| |||||| ||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||| ||| ||||||||||||| |||||    
T  7158331 aaatgattaatatttacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaatggcctataattgtagggatgaaatgcatatttaagc 7158232  T
Q  291 c 291  Q
    |    
T  7158231 c 7158231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 12930872 - 12930772
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||||| ||| || ||| ||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  12930872 aaatgattaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaatgacctataattgcagggatgaaatgcatatttaagc 12930773  T
Q  291 c 291  Q
    |    
T  12930772 c 12930772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 292 - 366
Target Start/End: Complemental strand, 6361944 - 6361870
Alignment:
Q  292 aattcacaacataaagctactttcgattggttaaaccaaaacttctcaagattccatgtaaattattgaaggaaa 366  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||    
T  6361944 aattcacaacataaagctactttcgattggttaaacccaaaggtctcaagattccatgtaaattattgaaggaaa 6361870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 27480123 - 27479987
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||  |||| ||||||||||| | | ||||||||| |  ||||| ||| ||||| |||||||||||||||||| ||||||||||||||      
T  27480123 gtggcagtgattatctgggaagagggacgaactttcaaatgattagtaattacaggggcaaaataggaggattagtaagctcagggatgaaaaatcaagc 27480024  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    | |||||||||||||| |||||| |||||| ||||||    
T  27480023 ggcctataattgcagggatgaaaagcatatttaagcc 27479987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 12929387 - 12929287
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||||| ||| || ||| |||||||||||||||||||| ||| ||||||||||||||||  |||||| ||||||| ||||||||||||| |||||    
T  12929387 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatagcctatatttgcagggatgaaatgcatatttaagc 12929288  T
Q  291 c 291  Q
    |    
T  12929287 c 12929287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 214 - 291
Target Start/End: Complemental strand, 37284186 - 37284109
Alignment:
Q  214 aaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||| |||||| |||||| ||||||    
T  37284186 aaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattacagggatgaaaagcatatttaagcc 37284109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 155 - 284
Target Start/End: Complemental strand, 22661493 - 22661364
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| ||| |||||||||||||||     
T  22661493 gtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcaaggatgaaaaatcaaac 22661394  T
Q  255 gacctataattgcaggaatgaaatgcatat 284  Q
    | ||||||||| |||| |||||| ||||||    
T  22661393 ggcctataattacagggatgaaaagcatat 22661364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 291
Target Start/End: Original strand, 37289333 - 37289410
Alignment:
Q  214 aaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||||||| |||| |||||| |||||| ||||||    
T  37289333 aaaatgggaggattagtaagctcagggatgaaaaaccaaatggcctataattacagggatgaaaagcatatttaagcc 37289410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 200
Target Start/End: Complemental strand, 24388960 - 24388910
Alignment:
Q  150 gtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  24388960 gtgatgtggcagtgattaagtggggagagggacgaaattttaagtgattaa 24388910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 3914282 - 3914229
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||| || ||||||||||||| ||||||||||||    
T  3914282 ttagtgatgtggcagtgattaagttggaagagggacgaaattttaaatgattaa 3914229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 17102156 - 17102111
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  17102156 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 17102111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 27396887 - 27396932
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  27396887 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 27396932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 27991875 - 27991830
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  27991875 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 27991830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 28469292 - 28469345
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||||||||||    
T  28469292 ttagtgacgtggtagtgattaagtggggagagggacgaaattttaaatgattaa 28469345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 30948421 - 30948466
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  30948421 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 30948466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 32053427 - 32053480
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  32053427 ttagtgacgtgacagtgattaagtggggagagggacgaaattttaaatgattaa 32053480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 32680856 - 32680901
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  32680856 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 32680901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 40379913 - 40379860
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| |||||| |||||||||||||||||||||||||| ||||||||||||    
T  40379913 ttagtgacgtggcattgattaagtggggagagggacgaaattttaaatgattaa 40379860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 42731563 - 42731510
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  |||||||||||||||||||||||||||||||| ||||||||||||    
T  42731563 ttagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaa 42731510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 291
Target Start/End: Original strand, 27480731 - 27480847
Alignment:
Q  175 agagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatg 274  Q
    ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||  ||| ||||||||||||||| | ||||||||| |||| |||    
T  27480731 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaaaatcaaggatgaaaaatcaaacggcctataattacagggatg 27480830  T
Q  275 aaatgcatatgtaagcc 291  Q
    |||  ||||| ||||||    
T  27480831 aaaaacatatttaagcc 27480847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 31695637 - 31695707
Alignment:
Q  214 aaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    ||||||| |||||||||||| | | ||||||||  |||||||||||||| ||||||| |||||||||||||    
T  31695637 aaaatggaaggattagtaagtttagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatat 31695707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 10935938 - 10935885
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  ||||||||||||||||| |||||||||||||| ||||||||||||    
T  10935938 ttagtgacatggcagtgattaagtggagagagggacgaaattttaaatgattaa 10935885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 32298997 - 32299042
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| || |||||||||    
T  32298997 gtggcagtgattaagtggggagagggacgaaattttcaatgattaa 32299042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 34928911 - 34928956
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  34928911 gtggcagtgattaagtggggagagggacgaaattttaaacgattaa 34928956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 39686795 - 39686840
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  39686795 gtggcagtgattaagtggggagagggacgaaattttaaacgattaa 39686840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 45010742 - 45010689
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  |||||||||||||||||||||| ||||||||| ||||||||||||    
T  45010742 ttagtgacttggcagtgattaagtggggagatggacgaaattttaaatgattaa 45010689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 45010896 - 45010941
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||    
T  45010896 gtggcagtgattaagtggggagagagacgaaattttaaatgattaa 45010941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 13311323 - 13311375
Alignment:
Q  153 atgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    |||||||||||||||||| |||||||||||||||| |||||| ||||| ||||    
T  13311323 atgtggcagtgattaagtcgggagagggacgaaattttaaattattaaatttt 13311375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 22871570 - 22871614
Alignment:
Q  156 tggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||    
T  22871570 tggcagtgattaagtggggagagggaagaaattttaaatgattaa 22871614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 47559026 - 47559106
Alignment:
Q  153 atgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaag 233  Q
    |||||| |||||||||  | ||||||| || |||| ||||||| |||||||||||| ||  ||||||||||||||||||||    
T  47559026 atgtggaagtgattaaccgaggagaggaacaaaattttaaatggttaatttttacagggagaaaatgggaggattagtaag 47559106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 17886782 - 17886841
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggta 214  Q
    |||||||||||||||||||   ||||||||||| ||||||||||||| ||| ||||||||    
T  17886782 gtggcagtgattaagtgggtcaagggacgaaattttaaatgattaatatttgcaagggta 17886841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 27558136 - 27558215
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcagg 270  Q
    ||||||||||| ||| ||| || ||||||| |||||||||||  || |||| ||||| |||||||||||||| |||||||    
T  27558136 aaatgattaatatttgcaatggcaaaatggaaggattagtaacttcgtggacgaaaattcaaatgacctatatttgcagg 27558215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 2640474 - 2640515
Alignment:
Q  159 cagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  2640474 cagtgattaagtggggagagagacgaaattttaaatgattaa 2640515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 6253607 - 6253562
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||| ||||||||||| |||||||||||||| ||||||||||||    
T  6253607 gtggcattgattaagtggagagagggacgaaattttaaatgattaa 6253562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 6571145 - 6571104
Alignment:
Q  159 cagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  6571145 cagtgattaagtggggagagggacaaaattttaaatgattaa 6571104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 276
Target Start/End: Original strand, 7159213 - 7159297
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaa 276  Q
    ||||||||||| ||| || |||||||||||||||||||||||  ||| | | ||||| |||||||| ||||| ||||||| |||||    
T  7159213 aaatgattaatatttgca-gggtaaaatgggaggattagtaacttcaggaacgaaaattcaaatgatctatatttgcagggatgaa 7159297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 19204625 - 19204580
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||| ||||||||||||||||||||| |||| ||||||||||||    
T  19204625 gtggcaatgattaagtggggagagggacaaaattttaaatgattaa 19204580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 23181290 - 23181331
Alignment:
Q  159 cagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||| |||||||||||||| ||||||||||||    
T  23181290 cagtgattaagtggagagagggacgaaattttaaatgattaa 23181331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 5457193 - 5457244
Alignment:
Q  149 agtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||| |||||||||||||| ||||  |||||||||||| ||||||||||||    
T  5457193 agtgacgtggcagtgattaactgggatgagggacgaaattttaaatgattaa 5457244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 37656996 - 37656949
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaat 194  Q
    ||||||| ||| | ||||||||||||||||||||||||||| ||||||    
T  37656996 ttagtgacgtgccggtgattaagtggggagagggacgaaattttaaat 37656949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 40022552 - 40022621
Alignment:
Q  214 aaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    ||||||| |||||||||||| ||| ||||||||  |||||||| ||||| ||||||| ||||||| |||||    
T  40022552 aaaatggaaggattagtaagatcagggatgaaatttcaaatga-ctatatttgcagggatgaaatacatat 40022621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 12929514 - 12929461
Alignment:
Q  224 gattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaa 277  Q
    |||||||||  ||||||| ||||| |||||||||||||| ||||||| ||||||    
T  12929514 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaa 12929461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 15714584 - 15714629
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||| |||||||| ||||||| |||| |||||||    
T  15714584 gtggcagtgattaagtagggagaggaacgaaatgttaagtgattaa 15714629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 32688510 - 32688567
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaaggg 212  Q
    |||||||| ||||||||||   ||||||||||| ||||||||||||| ||| ||||||    
T  32688510 gtggcagttattaagtgggtcaagggacgaaattttaaatgattaatatttgcaaggg 32688567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 42019881 - 42019934
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  |||||||||||||||| |||||| |||||||| |||||| |||||    
T  42019881 ttagtgacatggcagtgattaagtgaggagagagacgaaattttaaataattaa 42019934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 43124444 - 43124489
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||| |||| | ||||||||||| ||||||||||||    
T  43124444 gtggcagtgattaactgggaatagggacgaaattttaaatgattaa 43124489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 11400259 - 11400311
Alignment:
Q  153 atgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    |||||| ||||||||||||||||||| ||  |||| |||||||||||| ||||    
T  11400259 atgtggaagtgattaagtggggagagagaataaattttaaatgattaaatttt 11400311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 284
Target Start/End: Complemental strand, 31694546 - 31694478
Alignment:
Q  216 aatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    |||||||||||||||||  | | ||||||||  |||||||  ||||| ||||||| |||||||||||||    
T  31694546 aatgggaggattagtaaatttagggatgaaatttcaaatggactatatttgcagggatgaaatgcatat 31694478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 2e-56; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 121 - 284
Target Start/End: Complemental strand, 25065103 - 25064940
Alignment:
Q  121 gtcaacacaacccctaatttgctgacttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgg 220  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||| | ||  | |||||    
T  25065103 gtcaacacaccccctaatttgctgacttagtgacgtggcagtgatcaagtgaggagagggacgaaatcttaaatgattaatttttatagggacagaatgg 25065004  T
Q  221 gaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||||||||| |||||||||||||    
T  25065003 gaggattagtaagatcagggatgaaaaatcaaattacctataattgcagggatgaaatgcatat 25064940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 149 - 284
Target Start/End: Original strand, 25065916 - 25066051
Alignment:
Q  149 agtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaa 248  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||    
T  25065916 agtgaggtggcagtgattaagtggagagagggacgaaatcttaaatgattaatttttacaggggtaaaatggaaggattagtaagctcagggatgaaaaa 25066015  T
Q  249 tcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    ||||||| | |||||||  ||| |||||||||||||    
T  25066016 tcaaatggcttataattatagggatgaaatgcatat 25066051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 13295271 - 13295135
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    ||||||||||||||  ||| |||||||||| || |||||||||||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||    
T  13295271 gtggcagtgattaaccgggaagagggacgacattttaaatgattaatttttacaagggcaaaatggaaggattagtaagctcaggggtgaaaaatcaaat 13295172  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    ||||||||||| ||||  |||||||||||| ||||||    
T  13295171 gacctataattacaggggtgaaatgcatatttaagcc 13295135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 155 - 292
Target Start/End: Complemental strand, 46282207 - 46282070
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| ||| |||||||||||||||     
T  46282207 gtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaac 46282108  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcca 292  Q
    ||||||||||| |||| ||||||  ||||| |||||||    
T  46282107 gacctataattacagggatgaaaaacatatttaagcca 46282070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 151 - 284
Target Start/End: Original strand, 46282753 - 46282886
Alignment:
Q  151 tgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatc 250  Q
    |||||||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| ||| ||||||||||||    
T  46282753 tgatgtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatc 46282852  T
Q  251 aaatgacctataattgcaggaatgaaatgcatat 284  Q
    ||| | ||||||||| |||| |||||| ||||||    
T  46282853 aaacggcctataattacagggatgaaaagcatat 46282886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 2829539 - 2829645
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaa-------atcaaatgacctataattgcaggaatgaaatgcata 283  Q
    ||||||||||| ||| || |||||||||||||||||||||||||||| |||||||||       ||||||||||||||||||| ||| ||||||||||||    
T  2829539 aaatgattaatatttgcaggggtaaaatgggaggattagtaagctcaaggatgaaaaatcaaatatcaaatgacctataattgtagggatgaaatgcata 2829638  T
Q  284 tgtaagc 290  Q
    | |||||    
T  2829639 tttaagc 2829645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 191 - 284
Target Start/End: Complemental strand, 6344355 - 6344262
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    ||||| ||||| ||| |||||| |||||||||||||||||||| ||||||||||||  ||||||||||  ||||| |||| |||||||||||||    
T  6344355 aaatgtttaatatttgcaagggcaaaatgggaggattagtaagttcatggatgaaatttcaaatgacccctaattacagggatgaaatgcatat 6344262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 24009825 - 24009878
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24009825 ttagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 24009878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 191 - 284
Target Start/End: Complemental strand, 32619484 - 32619391
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    ||||||||| |  ||||| ||| |||||||||||||||||||||||| ||||||||||||||||| || |||||| |||| |||||| ||||||    
T  32619484 aaatgattagtaattacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcccataattacagggatgaaaagcatat 32619391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 2828293 - 2828193
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||||| ||| ||  || ||||| | |||||||||||| | |||||||||||||||||||| ||||||||||| | ||||||||||||| |||||    
T  2828293 aaatgattaatatttgcagaggcaaaatagaaggattagtaagtttatggatgaaaaatcaaatgatctataattgcaaggatgaaatgcatatttaagc 2828194  T
Q  291 c 291  Q
    |    
T  2828193 c 2828193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 49093177 - 49093041
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| ||| |||||||||||||||     
T  49093177 gtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacatgggcaaaatggaaggattagtaagttcagggatgaaaaatcaaac 49093078  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    | ||||||||| |||| |||||| |||| | ||||||    
T  49093077 ggcctataattacagggatgaaaagcatgtttaagcc 49093041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 293
Target Start/End: Original strand, 51935222 - 51935301
Alignment:
Q  214 aaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagccaa 293  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| ||||||| || | |||||| |||||| ||||||||    
T  51935222 aaaatgggaggattagaaagctcagggatgaaaaatcaaatgacatataattacatggatgaaaagcatatttaagccaa 51935301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 34850351 - 34850417
Alignment:
Q  149 agtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaa 215  Q
    ||||| ||||||||||||||||||||||||||| ||||| |||||||||||| |||| |||||||||    
T  34850351 agtgacgtggcagtgattaagtggggagagggatgaaattttaaatgattaaattttgcaagggtaa 34850417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 179 - 284
Target Start/End: Original strand, 6345625 - 6345730
Alignment:
Q  179 ggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaat 278  Q
    |||| |||| ||||||| ||||| ||| || ||| ||||||| |||||||||||| ||| ||||||||  ||||||||||  |||||||||| |||||||    
T  6345625 ggactaaattttaaatgcttaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaatttcaaatgacccctaattgcagggatgaaat 6345724  T
Q  279 gcatat 284  Q
    ||||||    
T  6345725 gcatat 6345730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 6367706 - 6367653
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  6367706 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 6367653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 204 - 277
Target Start/End: Original strand, 32622369 - 32622442
Alignment:
Q  204 ttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaa 277  Q
    ||||| ||| |||||||||||||||||||||||| ||||||||||||||||| || |||||| |||| ||||||    
T  32622369 ttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcccataattacagggatgaaa 32622442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 32917404 - 32917351
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  32917404 ttagtgatgtggcagtgattaagtggggagagagacgaaattttaaatgattaa 32917351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 34849152 - 34849087
Alignment:
Q  150 gtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaa 215  Q
    |||| ||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||||||    
T  34849152 gtgacgtggcagtgattaagaggggagagggacgaaattttaaatgattaaattttgcaagggtaa 34849087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 40210654 - 40210707
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  40210654 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 40210707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 13295608 - 13295680
Alignment:
Q  219 gggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    |||||| ||||||||||||  |||||||||||||||| ||||||||| |||| ||||||||||||| ||||||    
T  13295608 gggagggttagtaagctcagagatgaaaaatcaaatggcctataattacagggatgaaatgcatatttaagcc 13295680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 10304060 - 10304009
Alignment:
Q  154 tgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  10304060 tgtggcagtgattaagtggggagagggacgaaattttaaatgattaaatttt 10304009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 13914351 - 13914433
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattag 229  Q
    ||||||| |||||||||||| |||||||||||||||||||| ||||||||||||    |||||||||||| ||  ||||||||    
T  13914351 ttagtgacgtggcagtgatttagtggggagagggacgaaattttaaatgattaaacaatacaagggtaaattgccaggattag 13914433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 31514578 - 31514624
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaat 201  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  31514578 gtggcagtgattaagtggggagagggacgaaattttaaatgattaat 31514624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 37578476 - 37578530
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaat 201  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||||||||||||    
T  37578476 ttagtgacgtggcagtgattaagtggggagagtgacgaaattttaaatgattaat 37578530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 183483 - 183528
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  183483 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 183528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 4960684 - 4960631
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  4960684 ttagtgacgtggcagtgattaagtgggaagagggacgaaattttaaatgattaa 4960631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 17662134 - 17662187
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  17662134 ttagtgacgtggcagtgattaagtgggaagagggacgaaattttaaatgattaa 17662187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 24905428 - 24905473
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  24905428 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 24905473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 25648020 - 25647975
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  25648020 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 25647975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 28011499 - 28011454
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  28011499 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 28011454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 33442855 - 33442900
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  33442855 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 33442900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 42248609 - 42248564
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  42248609 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 42248564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 175 - 284
Target Start/End: Original strand, 50062932 - 50063041
Alignment:
Q  175 agagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatg 274  Q
    ||||||||||| | | ||||||||| |  |||||  || ||||||| |||||||||||| ||| ||||||||||||||| | ||||||||| |||| |||    
T  50062932 agagggacgaactttcaaatgattagtaattacagaggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatg 50063031  T
Q  275 aaatgcatat 284  Q
    ||| ||||||    
T  50063032 aaaagcatat 50063041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 16970828 - 16970880
Alignment:
Q  156 tggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttaca 208  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| |||||||    
T  16970828 tggcaatgattaagtggggagagggacgaaattttaaatgattaaattttaca 16970880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 10304146 - 10304197
Alignment:
Q  154 tgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  10304146 tgtggcagtgattaagtggggagagagacgaaattttaaatgattaaatttt 10304197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 19017913 - 19017995
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattag 229  Q
    ||||||||| ||||||||||||||||| |||||||| |||| |||||||||||| |  | |||||||||| ||  ||||||||    
T  19017913 ttagtgatgcggcagtgattaagtgggaagagggacaaaattttaaatgattaaataatgcaagggtaaattgccaggattag 19017995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 21444738 - 21444680
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    ||||||| ||||||||||||||||||||||| ||||||||| |||| ||||||| ||||    
T  21444738 ttagtgacgtggcagtgattaagtggggagatggacgaaattttaagtgattaaatttt 21444680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 22103790 - 22103848
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    ||||||| |||||||||||||||||| |||||||||||||| |||| ||||||| ||||    
T  22103790 ttagtgacgtggcagtgattaagtggagagagggacgaaattttaagtgattaaatttt 22103848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 32238776 - 32238706
Alignment:
Q  214 aaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    |||||||||||||||||||| ||| ||||||||  ||||||  |||||| ||||||| |||||||||||||    
T  32238776 aaaatgggaggattagtaagttcagggatgaaatttcaaatagcctatatttgcagggatgaaatgcatat 32238706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 42267447 - 42267389
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    ||||||| |||| ||||||||||||||||||| |||||||| |||||||||||| ||||    
T  42267447 ttagtgacgtggtagtgattaagtggggagagagacgaaatattaaatgattaaatttt 42267389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 155 - 253
Target Start/End: Original strand, 49093777 - 49093875
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaa 253  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| ||| |||||||||||||||    
T  49093777 gtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaa 49093875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 52134204 - 52134130
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattag 229  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||   ||||| || |||||||  ||||||||    
T  52134204 gtggcagtgattaagtggggagagggacgaaattttaaacgattaacaattacagggttaaaatgccaggattag 52134130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 1103593 - 1103552
Alignment:
Q  159 cagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  1103593 cagtgattaagtggggagagggacgaaattttaaatgattaa 1103552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 1841603 - 1841550
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  ||||||||||||||||||||||| |||||||| ||||||||||||    
T  1841603 ttagtgacatggcagtgattaagtggggagagtgacgaaattttaaatgattaa 1841550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 4716729 - 4716774
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||    
T  4716729 gtggcagtgattaagtggggagagagacgaaattttaaatgattaa 4716774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 13245994 - 13245913
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggatta 228  Q
    ||||||| ||| |||||||||||||||||||||||| |||| |||| ||||||| ||||   |||||||||||  |||||||    
T  13245994 ttagtgacgtgacagtgattaagtggggagagggacaaaattttaagtgattaaattttggcagggtaaaatgccaggatta 13245913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 14879103 - 14879062
Alignment:
Q  159 cagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  14879103 cagtgattaagtggggagagggacgaaattttaaatgattaa 14879062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 26024559 - 26024514
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||    
T  26024559 gtggcagtgattaagtggggagagggacgaacttttaaatgattaa 26024514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 30711471 - 30711418
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  ||||||||||||||||||| |||||||||||| ||||||||||||    
T  30711471 ttagtgacatggcagtgattaagtggggcgagggacgaaattttaaatgattaa 30711418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 34464733 - 34464786
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  ||||||||||||||||||||||||||| |||| ||||||||||||    
T  34464733 ttagtgacatggcagtgattaagtggggagagggacaaaattttaaatgattaa 34464786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 41098877 - 41098824
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||| ||||||||||||||||| ||||| |||| ||||||||||||    
T  41098877 ttagtgatgtggtagtgattaagtggggagggggacaaaattttaaatgattaa 41098824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 43758966 - 43758913
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  ||||||||||||||||| |||||||||||||| ||||||||||||    
T  43758966 ttagtgacatggcagtgattaagtggagagagggacgaaattttaaatgattaa 43758913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 47999384 - 47999429
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||||||||| || ||||||||||||    
T  47999384 gtggcagtgattaagtggggagagggacgatattttaaatgattaa 47999429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 19515954 - 19515910
Alignment:
Q  156 tggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||||||||||| |||||| |||||    
T  19515954 tggcagtgattaagtggggagagggacgaaattttaaataattaa 19515910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 36694541 - 36694585
Alignment:
Q  156 tggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||    
T  36694541 tggcagtgattaagtggggagagagacgaaattttaaatgattaa 36694585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 36710642 - 36710686
Alignment:
Q  156 tggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||    
T  36710642 tggcagtgattaagtggggagagagacgaaattttaaatgattaa 36710686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 40772642 - 40772598
Alignment:
Q  156 tggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||    
T  40772642 tggcggtgattaagtggggagagggacgaaattttaaatgattaa 40772598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 10019657 - 10019728
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctata 262  Q
    ||||||||||| ||| ||| || ||||||| |||||||||||  ||| ||||||||| ||||||||||||||    
T  10019657 aaatgattaatatttgcaatggcaaaatggaaggattagtaacttcagggatgaaaattcaaatgacctata 10019728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 23209620 - 23209662
Alignment:
Q  156 tggcagtgattaagtggggagagggacgaaatcttaaatgatt 198  Q
    ||||||||||||||||||||||||||||||||  |||||||||    
T  23209620 tggcagtgattaagtggggagagggacgaaattgtaaatgatt 23209662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 27999135 - 27999193
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    ||||||| ||||||||||||||||||| |||| |||||||| | |||||||||| ||||    
T  27999135 ttagtgaggtggcagtgattaagtgggaagagagacgaaatttaaaatgattaaatttt 27999193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 200
Target Start/End: Complemental strand, 35152476 - 35152434
Alignment:
Q  158 gcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  35152476 gcagtgattaagtggggagagggacaaaattttaaatgattaa 35152434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 52563728 - 52563658
Alignment:
Q  214 aaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    ||||||||||||||||||| |||| ||||||||   |||||  |||||| ||||||| |||||||||||||    
T  52563728 aaaatgggaggattagtaacctcaaggatgaaattccaaataccctatatttgcagggatgaaatgcatat 52563658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 291
Target Start/End: Original strand, 28534817 - 28534896
Alignment:
Q  211 ggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    |||||||||| |||||||||||| ||| ||||||||  ||||||| |||||| || || ||| ||||||||||| ||||||    
T  28534817 ggtaaaatggaaggattagtaagttcagggatgaaatttcaaatgccctatatttaca-gaacgaaatgcatatttaagcc 28534896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 48691290 - 48691242
Alignment:
Q  149 agtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgat 197  Q
    ||||| |||||||||||||||||||||||| ||| |||| |||||||||    
T  48691290 agtgacgtggcagtgattaagtggggagagtgacaaaattttaaatgat 48691242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 33347700 - 33347779
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcagg 270  Q
    ||||||||||| ||| |||||| | | ||| |||||||||||  ||| ||| ||||| |||||||||||||| |||||||    
T  33347700 aaatgattaatatttgcaagggcagattggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagg 33347779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 49002976 - 49002897
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcagg 270  Q
    ||||||||||| ||| || ||| | | ||| |||||||||||  ||||||| ||||| |||||||||||||| |||||||    
T  49002976 aaatgattaatatttgcaggggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagg 49002897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 293
Target Start/End: Original strand, 2953748 - 2953850
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||||| ||| || ||| | | ||| |||||||||||  ||| ||| ||||| |||||||||||||| ||||||| | ||||  ||||| |||||    
T  2953748 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 2953847  T
Q  291 caa 293  Q
    |||    
T  2953848 caa 2953850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 44523420 - 44523473
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| |||||||||||||||||  | |||||| ||||| ||||||||||||    
T  44523420 ttagtgacgtggcagtgattaagtgaagggagggatgaaattttaaatgattaa 44523473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 46163162 - 46163121
Alignment:
Q  159 cagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||| ||||||||||||||| |||||||| ||||||||||||    
T  46163162 cagtaattaagtggggagagagacgaaattttaaatgattaa 46163121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 48779261 - 48779208
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  |||||||||||||||||||||||| | | ||| ||||||||||||    
T  48779261 ttagtgacatggcagtgattaagtggggagaggaaaggaattttaaatgattaa 48779208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 50062339 - 50062246
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaa 248  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| | | ||||||| |||||||||||| ||| ||||||||||    
T  50062339 gtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggagcaaaatggaaggattagtaagttcagggatgaaaaa 50062246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 49003190 - 49003238
Alignment:
Q  222 aggattagtaagctcatggatgaaaaatcaaatgacctataattgcagg 270  Q
    |||||||||||  ||||||| ||||| |||||||||||||| |||||||    
T  49003190 aggattagtaacttcatggacgaaaattcaaatgacctatatttgcagg 49003238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 4e-51; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 151 - 293
Target Start/End: Original strand, 25624393 - 25624535
Alignment:
Q  151 tgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatc 250  Q
    ||||||||||||||||||  ||| ||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  25624393 tgatgtggcagtgattaaccgggtagagggacgaaattttaaatgattaatttttacaggggaaaaatgggaggattagtaagctcagggatgaaaaatc 25624492  T
Q  251 aaatgacctataattgcaggaatgaaatgcatatgtaagccaa 293  Q
    ||||||||||||||| |||| ||||||||||||| ||||||||    
T  25624493 aaatgacctataattacagggatgaaatgcatatttaagccaa 25624535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 155 - 292
Target Start/End: Complemental strand, 25623424 - 25623287
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    ||||||||||||||  ||| ||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||    
T  25623424 gtggcagtgattaaccgggtagagggacgaaattttaaatgattaatttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaat 25623325  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcca 292  Q
    | |||||||||  ||| ||||||||||||| |||||||    
T  25623324 ggcctataattatagggatgaaatgcatatttaagcca 25623287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 24387451 - 24387351
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    |||||||||||||||||| ||  |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||||| |||||    
T  24387451 aaatgattaatttttacatggacaaaatgggaggattagtaagctcagggatgaaaaattaaatggcctataattgcagggatgaaatgcatatttaagc 24387352  T
Q  291 c 291  Q
    |    
T  24387351 c 24387351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 190 - 291
Target Start/End: Original strand, 24388255 - 24388356
Alignment:
Q  190 taaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaag 289  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||| ||||||||||||||||  | |||||||||||| ||||||||||||| ||||    
T  24388255 taaatgattaatttttacaatggcaaaatggaaggattagtaagctcagggatgaaaaatcaaattgcttataattgcagggatgaaatgcatatttaag 24388354  T
Q  290 cc 291  Q
    ||    
T  24388355 cc 24388356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 214 - 291
Target Start/End: Complemental strand, 20101847 - 20101770
Alignment:
Q  214 aaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||| |||||| |||||| ||||||    
T  20101847 aaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattacagggatgaaaagcatatttaagcc 20101770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 29957953 - 29957817
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||| |||||||  ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| ||| |||||||||||||||     
T  29957953 gtggcaatgattaaccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaac 29957854  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    | ||||||||| |||| |||||| |||||| ||||||    
T  29957853 ggcctataattacagggatgaaaagcatatttaagcc 29957817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 155 - 293
Target Start/End: Original strand, 20983225 - 20983363
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| ||| |||||||||||||||     
T  20983225 gtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaac 20983324  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagccaa 293  Q
    |  |||||||| |||| |||||| |||||| ||||||||    
T  20983325 ggtctataattacagggatgaaaagcatatttaagccaa 20983363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 15848232 - 15848179
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  15848232 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 15848179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 214 - 291
Target Start/End: Original strand, 20103167 - 20103244
Alignment:
Q  214 aaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||||||||| |||| || ||| |||||| ||||||    
T  20103167 aaaatgggaggattagtaagctcagggatgaaaaatctaatggcctataattacagggataaaaagcatatttaagcc 20103244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 37895631 - 37895684
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  37895631 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 37895684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 20982624 - 20982524
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||| |  ||||| ||| ||||||| |||||||||||| ||| ||||||||||||||| | ||||||||| |||| |||||| |||||| |||||    
T  20982624 aaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaagc 20982525  T
Q  291 c 291  Q
    |    
T  20982524 c 20982524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 293
Target Start/End: Original strand, 29958511 - 29958649
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    ||||||||||||||  ||| |||| |||||| | | ||||||||| |  ||| | ||| ||||||| |||||||||||| ||| |||||||||||||||     
T  29958511 gtggcagtgattaaccgggaagagagacgaactttcaaatgattagtaattataggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaac 29958610  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagccaa 293  Q
      ||||||||| |||| ||||||  ||||| ||||||||    
T  29958611 agcctataattacagggatgaaaaacatatttaagccaa 29958649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 6658014 - 6657969
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  6658014 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 6657969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 14900744 - 14900789
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  14900744 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 14900789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 16099191 - 16099146
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  16099191 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 16099146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 191 - 284
Target Start/End: Original strand, 19620793 - 19620886
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    ||||||||||| ||| || ||| ||||||| |||||||||||| ||| ||||||||  |||||||||||||| ||| ||| | |||||||||||    
T  19620793 aaatgattaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaatttcaaatgacctatatttgtagggacgaaatgcatat 19620886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 33739839 - 33739794
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  33739839 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 33739794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 36382305 - 36382252
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  36382305 ttagtgacgtggcagtgattaagtggggagagggatgaaattttaaatgattaa 36382252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 39423659 - 39423606
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  |||||||||||||||||||||||||||||||| ||||||||||||    
T  39423659 ttagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaa 39423606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 39498446 - 39498401
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  39498446 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 39498401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 44714045 - 44714098
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  |||||||||||||||||||||||||||||||| ||||||||||||    
T  44714045 ttagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaa 44714098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 11163316 - 11163360
Alignment:
Q  156 tggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  11163316 tggcagtgattaagtggggagagggacgaaattttaaatgattaa 11163360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 11689685 - 11689627
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    ||||||| ||||||||||||||||||||||| ||||||||| |||| ||||||| ||||    
T  11689685 ttagtgacgtggcagtgattaagtggggagatggacgaaattttaagtgattaaatttt 11689627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 2318302 - 2318249
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| |||||| | |||||||||||||||||||||||| ||||||||||||    
T  2318302 ttagtgacgtggcattaattaagtggggagagggacgaaattttaaatgattaa 2318249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 10712867 - 10712814
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| |||| |||||||||||||||||||||| ||||| ||||||||||||    
T  10712867 ttagtgacgtggtagtgattaagtggggagagggatgaaattttaaatgattaa 10712814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 13995934 - 13995979
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  13995934 gtggcagtgattaagtggggagagggacgaaattttaaacgattaa 13995979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 33062311 - 33062356
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||||||||||||  |||||||||||    
T  33062311 gtggcagtgattaagtggggagagggacgaaattataaatgattaa 33062356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 34447956 - 34447904
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||| |||||    
T  34447956 ttagtgatgtggcagtgattaagtggggagagagacgaaat-ttaaattattaa 34447904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 36479862 - 36479809
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  |||||||||||||||||||||| ||||||||| ||||||||||||    
T  36479862 ttagtgacatggcagtgattaagtggggagatggacgaaattttaaatgattaa 36479809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 36755237 - 36755184
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  36755237 ttagtgacgtgacagtgattaagtggggagagagacgaaattttaaatgattaa 36755184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 41248820 - 41248865
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  41248820 gtggcagtgattaagtggggagagggacgaaattttaaacgattaa 41248865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 17266535 - 17266484
Alignment:
Q  154 tgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||| ||||    
T  17266535 tgtgacagtgattaagtggggagagggaccaaattttaaatgattaaatttt 17266484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 7983837 - 7983903
Alignment:
Q  218 tgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    |||||||||||||||| |||| |||||||  |||||||||||||| |||| |  |||||||||||||    
T  7983837 tgggaggattagtaagttcatagatgaaatttcaaatgacctatatttgctgagatgaaatgcatat 7983903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 10840620 - 10840562
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    ||||||| ||| ||||||||||||||| ||||||||||||  |||||||||||| ||||    
T  10840620 ttagtgacgtgacagtgattaagtgggaagagggacgaaagtttaaatgattaaatttt 10840562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 11721374 - 11721432
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    ||||||| ||| |||||||||||||||||||| |||||||| |||| ||||||| ||||    
T  11721374 ttagtgacgtgacagtgattaagtggggagagagacgaaattttaagtgattaaatttt 11721432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 33882895 - 33882965
Alignment:
Q  214 aaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    ||||||||||||||||||| |||||  ||||||  ||||||| | |||| ||||||| |||||||||||||    
T  33882895 aaaatgggaggattagtaacctcatatatgaaatttcaaatgccttatatttgcagggatgaaatgcatat 33882965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 43236577 - 43236511
Alignment:
Q  218 tgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    |||||||||||||||| ||| ||||||||  ||||||| |||||| ||||||| || ||||||||||    
T  43236577 tgggaggattagtaagttcagggatgaaatttcaaatggcctatatttgcagggataaaatgcatat 43236511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 1696005 - 1696046
Alignment:
Q  159 cagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||| ||||| ||||||    
T  1696005 cagtgattaagtggggagagggacgaaattttaaacgattaa 1696046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 268
Target Start/End: Complemental strand, 28599527 - 28599450
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgca 268  Q
    ||||||||||| ||| ||| || ||||||| |||||||||||  ||||||| ||||| |||||||| ||||| |||||    
T  28599527 aaatgattaatatttgcaatggcaaaatggaaggattagtaacttcatggacgaaaattcaaatgatctatatttgca 28599450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 3653364 - 3653432
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaa 215  Q
    ||||||| |||| ||||||||| | || ||||||||||||| ||||||||||||  ||| |||||||||    
T  3653364 ttagtgacgtggtagtgattaacttggaagagggacgaaattttaaatgattaaactttgcaagggtaa 3653432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 45556247 - 45556203
Alignment:
Q  156 tggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||| ||||||||||| |||| ||||||||||||    
T  45556247 tggcagtgattaagtagggagagggacaaaattttaaatgattaa 45556203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 155 - 198
Target Start/End: Complemental strand, 6846920 - 6846877
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgatt 198  Q
    |||||||| |||||||||| ||||||||||||| ||||||||||    
T  6846920 gtggcagtaattaagtgggaagagggacgaaattttaaatgatt 6846877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 6573178 - 6573137
Alignment:
Q  159 cagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||| ||||||||||||||| | ||||||||||||    
T  6573178 cagtgattaaggggggagagggacgaatttttaaatgattaa 6573137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 6577561 - 6577614
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| ||||||||||||||||||| ||||||||| | | |||||| |||||    
T  6577561 ttagtgacgtggcagtgattaagtgggaagagggacggatttttaaataattaa 6577614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 268
Target Start/End: Original strand, 9694026 - 9694103
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgca 268  Q
    ||||||||||| ||| ||| |  ||||||| |||||||||||  ||| ||| ||||| |||||||||||||| |||||    
T  9694026 aaatgattaatatttgcaatgacaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgca 9694103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 22051278 - 22051330
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||| |||||||||||| ||||| |||| |||||||| ||||||||||||    
T  22051278 ttagtgatatggcagtgattaggtggg-agagagacgaaattttaaatgattaa 22051330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 25892530 - 25892485
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||| ||| |||||||||||||||||||||| | ||||||||||||    
T  25892530 gtggtagtaattaagtggggagagggacgaatttttaaatgattaa 25892485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 3122696 - 3122664
Alignment:
Q  151 tgatgtggcagtgattaagtggggagagggacg 183  Q
    ||||||||||||||||||||||||| |||||||    
T  3122696 tgatgtggcagtgattaagtggggatagggacg 3122664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 7981120 - 7981068
Alignment:
Q  218 tgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcagg 270  Q
    |||||||||||||||| ||  ||||||||  |||||||||||||| |||||||    
T  7981120 tgggaggattagtaagttcggggatgaaatttcaaatgacctatagttgcagg 7981068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 43681956 - 43681856
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||||| ||| ||| || ||||||| | |||||||||  | ||||| ||||| ||||||||| |||| ||||||| | ||||  ||||| |||||    
T  43681956 aaatgattaatatttgcaatggcaaaatggaatgattagtaactttatggacgaaaattcaaatgacatatatttgcagggacgaaagacatatttaagc 43681857  T
Q  291 c 291  Q
    |    
T  43681856 c 43681856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 8e-43; HSPs: 74)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 22870426 - 22870562
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    ||||||||||||||  ||| |||| |||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||    
T  22870426 gtggcagtgattaatcgggaagagagacgaaattttaaatgattaatttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaat 22870525  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    | ||||||||| |||| ||||||||||||| ||||||    
T  22870526 ggcctataattacagggatgaaatgcatatttaagcc 22870562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 155 - 284
Target Start/End: Complemental strand, 22869741 - 22869612
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    ||||||||||||||  ||| ||||||||||||| ||||||| |||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||    
T  22869741 gtggcagtgattaaccgggaagagggacgaaattttaaatggttaatttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaat 22869642  T
Q  255 gacctataattgcaggaatgaaatgcatat 284  Q
    | ||||||||| || | |||||||||||||    
T  22869641 ggcctataattacaaggatgaaatgcatat 22869612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 20857068 - 20856932
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    ||||||||||||||  ||| ||||||||||||| | |||||||||| ||||||| ||| |||||||||||||||||||||||| |||||||||||||||     
T  20857068 gtggcagtgattaaccgggaagagggacgaaatttcaaatgattaacttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaac 20856969  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    | ||||||||| |||| |||||| |||||| ||||||    
T  20856968 ggcctataattacagggatgaaaagcatatttaagcc 20856932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 151 - 284
Target Start/End: Complemental strand, 36476905 - 36476772
Alignment:
Q  151 tgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatc 250  Q
    |||||||||||||||||  |||| ||||||||||| | | ||||||||| |  ||||||||| |||||||||||||||||||||||| ||||||||||||    
T  36476905 tgatgtggcagtgattatctgggaagagggacgaactttcaaatgattagtaattacaagggcaaaatgggaggattagtaagctcagggatgaaaaatc 36476806  T
Q  251 aaatgacctataattgcaggaatgaaatgcatat 284  Q
    ||| | |||||||||||||| |||||| ||||||    
T  36476805 aaacggcctataattgcagggatgaaaagcatat 36476772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 155 - 284
Target Start/End: Original strand, 36477340 - 36477469
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||||||||||||||| | | ||||||||| |  ||||| ||| ||||||||||||||||||||||||||||||||||||||||     
T  36477340 gtggcagtgattatccggggagagggacgaactttcaaatgattagtaattacaggggcaaaatgggaggattagtaagctcatggatgaaaaatcaaac 36477439  T
Q  255 gacctataattgcaggaatgaaatgcatat 284  Q
    | |||||||||||||| |||||| ||||||    
T  36477440 ggcctataattgcagggatgaaaagcatat 36477469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 14744730 - 14744830
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||||| ||| || ||| |||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||| ||||||||||||| |||||    
T  14744730 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatgacatataattgcagggatgaaatgcatatttaagc 14744829  T
Q  291 c 291  Q
    |    
T  14744830 c 14744830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 20857511 - 20857647
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    ||||||||||||||  ||| ||||||||||||| | |||||||||| ||||||| ||| |||||||||||||||||||||| | | |||||||||||||     
T  20857511 gtggcagtgattaaccgggaagagggacgaaatttcaaatgattaacttttacaggggcaaaatgggaggattagtaagcttaggaatgaaaaatcaaac 20857610  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    | ||||||||| || | |||||| |||||| ||||||    
T  20857611 ggcctataattacatggatgaaaagcatatttaagcc 20857647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 210 - 291
Target Start/End: Complemental strand, 31108012 - 31107931
Alignment:
Q  210 gggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  31108012 gggtaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagcc 31107931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 214 - 291
Target Start/End: Complemental strand, 8654184 - 8654107
Alignment:
Q  214 aaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||  ||||| ||||||    
T  8654184 aaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattacagggatgaaaaacatatttaagcc 8654107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 20072833 - 20072969
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| ||| |||||||||||||||     
T  20072833 gtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaac 20072932  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    ||||||||||| |||| |||||| |||||| ||||||    
T  20072933 gacctataattacagggatgaaaagcatatttaagcc 20072969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 21978971 - 21979071
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    |||| ||||||||||||| || |||||| |||||||||||||| ||  ||||||||||||||||| | |||||||||||| ||||||||||||| |||||    
T  21978971 aaattattaatttttacagggataaaataggaggattagtaagttcgaggatgaaaaatcaaatggcttataattgcagggatgaaatgcatatttaagc 21979070  T
Q  291 c 291  Q
    |    
T  21979071 c 21979071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 155 - 293
Target Start/End: Complemental strand, 20072257 - 20072119
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||  |||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||  |||||||||||| ||| |||||||||||||||     
T  20072257 gtggcagtgattatctgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatgaaaggattagtaagttcagggatgaaaaatcaaac 20072158  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagccaa 293  Q
    | ||||||||| |||  |||||| |||||| ||||||||    
T  20072157 ggcctataattacagagatgaaaagcatatttaagccaa 20072119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 155 - 293
Target Start/End: Original strand, 39181760 - 39181898
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| ||| |||||||||||||||     
T  39181760 gtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaac 39181859  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagccaa 293  Q
    ||||||||||| |||| || |||  ||||| ||||||||    
T  39181860 gacctataattacagggattaaaaacatatttaagccaa 39181898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 35512292 - 35512239
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35512292 ttagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 35512239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 138 - 284
Target Start/End: Complemental strand, 16533046 - 16532900
Alignment:
Q  138 tttgctgacttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctca 237  Q
    |||||| | ||| ||| |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| ||||||| |||| |||    
T  16533046 tttgctaatttaatgacgtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattaataagttca 16532947  T
Q  238 tggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
     ||||||||||||||| | ||||||||| |||| |||||| ||||||    
T  16532946 gggatgaaaaatcaaacggcctataattacagggatgaaaagcatat 16532900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 5024302 - 5024355
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  5024302 ttagtgatgtggcagtgattaagtggggagaggaacgaaattttaaatgattaa 5024355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 191 - 284
Target Start/End: Original strand, 21978017 - 21978110
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    ||||||||| |  ||||| ||| ||| |||||||||||||||||||| ||||||||||||||||| || |||||| |||| |||||| ||||||    
T  21978017 aaatgattagtaattacaggggcaaagtgggaggattagtaagctcagggatgaaaaatcaaatggcccataattacagggatgaaaagcatat 21978110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 191 - 284
Target Start/End: Original strand, 31108338 - 31108430
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    ||||||||||| |||||| || |||||||| | |||||||||| |||||||||||||||||||||  ||||| ||||||| ||||||| |||||    
T  31108338 aaatgattaatatttacagggataaaatggaaagattagtaagttcatggatgaaaaatcaaatg-tctatatttgcagggatgaaatacatat 31108430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 32242386 - 32242333
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  32242386 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 32242333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 38442212 - 38442159
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  38442212 ttagttatgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 38442159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 291
Target Start/End: Complemental strand, 39181173 - 39181057
Alignment:
Q  175 agagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatg 274  Q
    ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| ||| ||||||||||||||| | | ||||||| |||| |||    
T  39181173 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcttataattacagggatg 39181074  T
Q  275 aaatgcatatgtaagcc 291  Q
    ||| |||||| ||||||    
T  39181073 aaaagcatatttaagcc 39181057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 292
Target Start/End: Original strand, 16533572 - 16533726
Alignment:
Q  138 tttgctgacttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctca 237  Q
    |||||| | ||| ||| |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| ||||||| |||| |||    
T  16533572 tttgctaatttaatgacgtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattaataagttca 16533671  T
Q  238 tggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagcca 292  Q
      |||||||||||||| | |||||||||  ||| |||||| |||||| |||||||    
T  16533672 gagatgaaaaatcaaacggcctataattatagggatgaaaagcatatttaagcca 16533726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 38475290 - 38475336
Alignment:
Q  154 tgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  38475290 tgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 38475336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 297275 - 297320
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  297275 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 297320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 3529134 - 3529179
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  3529134 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 3529179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 5994033 - 5993980
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  |||||||||||||||||||||||||||||||| ||||||||||||    
T  5994033 ttagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaa 5993980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 6758126 - 6758171
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  6758126 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 6758171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 14848992 - 14849049
Alignment:
Q  148 tagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    ||||||||||||||||||||||||||| ||||||| |||| |||||||||||| ||||    
T  14848992 tagtgatgtggcagtgattaagtggggtgagggaccaaattttaaatgattaaatttt 14849049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 41930652 - 41930607
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  41930652 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 41930607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 28269681 - 28269725
Alignment:
Q  156 tggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  28269681 tggcagtgattaagtggggagagggacgaaattttaaatgattaa 28269725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 28771131 - 28771175
Alignment:
Q  156 tggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  28771131 tggcagtgattaagtggggagagggacgaaattttaaatgattaa 28771175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 31482664 - 31482708
Alignment:
Q  156 tggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  31482664 tggcagtgattaagtggggagagggacgaaattttaaatgattaa 31482708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 158 - 200
Target Start/End: Original strand, 14194718 - 14194760
Alignment:
Q  158 gcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  14194718 gcagtgattaagtggggagagggacgaaattttaaatgattaa 14194760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 150 - 200
Target Start/End: Original strand, 24547412 - 24547462
Alignment:
Q  150 gtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||| ||||||||| ||||||||||||||||||||||| ||||||||||||    
T  24547412 gtgacgtggcagtggttaagtggggagagggacgaaattttaaatgattaa 24547462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 1506103 - 1506058
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  1506103 gtggcagtgattaagtggggagagggacgaaattttaaacgattaa 1506058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 8322536 - 8322495
Alignment:
Q  159 cagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  8322536 cagtgattaagtggggagagggacgaaattttaaatgattaa 8322495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 284
Target Start/End: Original strand, 8673774 - 8673851
Alignment:
Q  207 caagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    |||||| |||||||||| ||||| ||| ||| ||||||||  ||||||| |||||| ||||||| |||||||||||||    
T  8673774 caagggcaaaatgggagaattagcaagttcaaggatgaaatttcaaatggcctatatttgcagggatgaaatgcatat 8673851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 11047581 - 11047528
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  ||||||||||||||||||||||| |||||||| ||||||||||||    
T  11047581 ttagtgacatggcagtgattaagtggggagagagacgaaattttaaatgattaa 11047528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 13362512 - 13362565
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||| ||||||||||||||||||||| ||| |||| ||||||||||||    
T  13362512 ttagtgatgtagcagtgattaagtggggagagagactaaattttaaatgattaa 13362565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 13963008 - 13962955
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| ||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  13963008 ttagtgacgtgacagtgattaagtgaggagagggacgaaattttaaatgattaa 13962955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 19892592 - 19892645
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| |||||||||||||||||||||||  |||||||| ||||||||||||    
T  19892592 ttagtgacgtggcagtgattaagtggggagaatgacgaaattttaaatgattaa 19892645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 20840677 - 20840624
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||| |||||    
T  20840677 ttagtgacgtggcagtgattaagtggggagagggacaaaattttaaatcattaa 20840624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 27587284 - 27587239
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||    
T  27587284 gtggcagtgattaaatggggagagggacgaaattttaaatgattaa 27587239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 29646658 - 29646699
Alignment:
Q  159 cagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  29646658 cagtgattaagtggggagagggacgaaattttaaatgattaa 29646699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 35920480 - 35920521
Alignment:
Q  159 cagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  35920480 cagtgattaagtggggagagggacgaaattttaaatgattaa 35920521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 39453432 - 39453391
Alignment:
Q  159 cagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  39453432 cagtgattaagtggggagagggacgaaattttaaatgattaa 39453391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 6150589 - 6150545
Alignment:
Q  156 tggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||    
T  6150589 tggcaatgattaagtggggagagggacgaaattttaaatgattaa 6150545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 15644999 - 15645054
Alignment:
Q  150 gtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    ||||||||||||||||||||||||   ||||||||||| |||||||||||| ||||    
T  15644999 gtgatgtggcagtgattaagtgggtgtagggacgaaattttaaatgattaaatttt 15645054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 21260965 - 21260886
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcagg 270  Q
    ||||||||||| ||| ||| || ||||||| |||||||||||  ||| ||| ||||| |||||||||||||| |||||||    
T  21260965 aaatgattaatatttgcaatggcaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagg 21260886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 277
Target Start/End: Complemental strand, 21972166 - 21972104
Alignment:
Q  214 aaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaa 277  Q
    |||||||||||||||||||||| | ||||||||||||||||| || |||||| |||| ||||||    
T  21972166 aaaatgggaggattagtaagctga-ggatgaaaaatcaaatggcccataattacagggatgaaa 21972104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 12904898 - 12904840
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    ||||||| ||| || |||||||||||||||||||||||||| |||||| ||||| ||||    
T  12904898 ttagtgacgtgacattgattaagtggggagagggacgaaattttaaattattaaatttt 12904840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 16083114 - 16083068
Alignment:
Q  154 tgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  16083114 tgtggcagtgattaagttgggagaggtacgaaattttaaatgattaa 16083068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 39402148 - 39402210
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaa 253  Q
    ||||||||||| ||| || ||| ||||||||||||||||||||  || |||||||||||||||    
T  39402148 aaatgattaatatttgcaggggcaaaatgggaggattagtaagtccagggatgaaaaatcaaa 39402210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 186563 - 186510
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  ||| ||||||||||||||| |||||||||||| ||||||||||||    
T  186563 ttagtgacatggtagtgattaagtggggggagggacgaaattttaaatgattaa 186510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 11761885 - 11761840
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||| |||||||||||||||| ||||||||| ||||||||||||    
T  11761885 gtggcaatgattaagtggggagatggacgaaattttaaatgattaa 11761840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 16157139 - 16157192
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  |||||| |||||||||||||||||||| |||| ||||||||||||    
T  16157139 ttagtgacatggcagggattaagtggggagagggacaaaattttaaatgattaa 16157192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 17202543 - 17202490
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  ||||||||||||||||||||| |||||||||| ||||||| ||||    
T  17202543 ttagtgacatggcagtgattaagtggggagggggacgaaattttaaatgcttaa 17202490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 18247228 - 18247175
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  |||| |||||||||||||||||||||||||||  |||||||||||    
T  18247228 ttagtgacatggcggtgattaagtggggagagggacgaaattctaaatgattaa 18247175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 20814419 - 20814472
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  ||||||||||||||| ||||||||||| |||| ||||||||||||    
T  20814419 ttagtgacatggcagtgattaagtagggagagggacaaaattttaaatgattaa 20814472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 18670334 - 18670290
Alignment:
Q  156 tggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||| |||||||||||||||| ||||||||| ||||||||||||    
T  18670334 tggcaatgattaagtggggagatggacgaaattttaaatgattaa 18670290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 8323156 - 8323085
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctata 262  Q
    ||||||||||| | | ||| || ||||||| |||||||||||  ||||||| ||||| ||||||||||||||    
T  8323156 aaatgattaatatcttcaatggcaaaatggaaggattagtaacttcatggacgaaaattcaaatgacctata 8323085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 14745548 - 14745469
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcagg 270  Q
    ||||||||||| ||| || ||| | | ||| |||||||||||  ||| ||||||||| |||||||||||||| |||||||    
T  14745548 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacctatatttgcagg 14745469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 290
Target Start/End: Complemental strand, 18934813 - 18934714
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    |||||| |||| ||| ||| || ||||||  |||||||||||  ||||||| ||||| ||||||||| |||| ||||||| ||||||  ||||| |||||    
T  18934813 aaatgactaatatttgcaatggcaaaatgaaaggattagtaacttcatggacgaaaattcaaatgacttatatttgcagggatgaaagacatatttaagc 18934714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 290
Target Start/End: Complemental strand, 25253186 - 25253087
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||||| ||| || ||| ||| ||| |||||||||||  ||| ||| ||||| |||||||| ||||| ||||||| ||||||  ||||| |||||    
T  25253186 aaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgaactatatttgcagggatgaaagacatatttaagc 25253087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 290
Target Start/End: Complemental strand, 25316976 - 25316877
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||||| ||| || ||| ||| ||| |||||||||||  ||| ||| ||||| |||||||| ||||| ||||||| ||||||  ||||| |||||    
T  25316976 aaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgaactatatttgcagggatgaaagacatatttaagc 25316877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 14194567 - 14194513
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaat 201  Q
    |||||||||||||||||||||||| ||   | ||||||||| |||||||||||||    
T  14194567 ttagtgatgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaat 14194513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 12990912 - 12990965
Alignment:
Q  224 gattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaa 277  Q
    |||||||||  ||||||| ||||| |||||||||||||| ||||||| ||||||    
T  12990912 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaa 12990965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 13064533 - 13064586
Alignment:
Q  224 gattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaa 277  Q
    |||||||||  ||||||| ||||| |||||||||||||| ||||||| ||||||    
T  13064533 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaa 13064586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 40150098 - 40150151
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||| | ||  ||||||| || ||||||||||||||    
T  40150098 ttagtgatgtggcagtgattaattaggttgagggaccaattcttaaatgattaa 40150151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 14848869 - 14848825
Alignment:
Q  161 gtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    |||||||||||||| ||||||| |||| |||||||||||| ||||    
T  14848869 gtgattaagtggggggagggaccaaattttaaatgattaaatttt 14848825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 25253370 - 25253470
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||| | ||| |||||| | | ||| |||||||||||  ||| ||| ||||| |||||||||||||| ||||||| | ||||  ||||| |||||    
T  25253370 aaatgattagtatttgcaagggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 25253469  T
Q  291 c 291  Q
    |    
T  25253470 c 25253470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 25317161 - 25317261
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||| | ||| |||||| | | ||| |||||||||||  ||| ||| ||||| |||||||||||||| ||||||| | ||||  ||||| |||||    
T  25317161 aaatgattagtatttgcaagggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 25317260  T
Q  291 c 291  Q
    |    
T  25317261 c 25317261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 27937303 - 27937343
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaat 187  Q
    ||||||| |||||||||||| ||||||||||||||| ||||    
T  27937303 ttagtgacgtggcagtgatttagtggggagagggacaaaat 27937343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 32052508 - 32052608
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||||| ||| || ||| | | ||| |||||||||||  ||| ||| ||||| |||||||||||||| ||||||| | ||||  ||||| |||||    
T  32052508 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 32052607  T
Q  291 c 291  Q
    |    
T  32052608 c 32052608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 2e-40; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 23455653 - 23455789
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    ||||||||||||||  ||| ||||||||||||| | ||||||||||||||||||  || |||||||||||||||||||||||| | ||||||||||||||    
T  23455653 gtggcagtgattaatcgggaagagggacgaaatttgaaatgattaatttttacagtggcaaaatgggaggattagtaagctcaggaatgaaaaatcaaat 23455752  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    ||||||||||| |||| ||||||||||||| ||||||    
T  23455753 gacctataattacagggatgaaatgcatatttaagcc 23455789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 23455090 - 23454954
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    ||||||||||||||   || ||||||||| ||| |||||||  ||||||||||| ||| ||||||||| |||||||||||||| ||||||||||||||||    
T  23455090 gtggcagtgattaatcaggaagagggacggaattttaaatgggtaatttttacaggggcaaaatgggatgattagtaagctcagggatgaaaaatcaaat 23454991  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    | ||||||||| |||| ||||||||||||| ||||||    
T  23454990 ggcctataattacagggatgaaatgcatatttaagcc 23454954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 155 - 284
Target Start/End: Original strand, 38982560 - 38982689
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||||||||||||||| | | ||||||||| |  ||||| ||| |||||||||||||||||||||||| |||||||||||||||     
T  38982560 gtggcagtgattatccggggagagggacgaactttcaaatgattagtaattacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaac 38982659  T
Q  255 gacctataattgcaggaatgaaatgcatat 284  Q
    | |||||||||||||| |||||| ||||||    
T  38982660 ggcctataattgcagggatgaaaagcatat 38982689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 53477080 - 53477180
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||||| ||| || ||| |||||||||||||||||||| |||  ||||||||||||||||||||||||||||||  ||||||||||||| |||||    
T  53477080 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagagatgaaaaatcaaatgacctataattgcagagatgaaatgcatatttaagc 53477179  T
Q  291 c 291  Q
    |    
T  53477180 c 53477180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 200 - 293
Target Start/End: Original strand, 54591587 - 54591680
Alignment:
Q  200 atttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagccaa 293  Q
    |||||| || ||| ||||||||||| |||||||| ||| |||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||    
T  54591587 atttttgcaggggcaaaatgggaggtttagtaagttcagggatgaaaaatcaaatgatctataattgcagggatgaaatgcatatttaagccaa 54591680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 56556718 - 56556582
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| |||||||||||||||||||     
T  56556718 gtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaac 56556619  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    | ||||||||| |||| |||||| |||||| ||||||    
T  56556618 ggcctataattacagggatgaaaagcatatttaagcc 56556582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 155 - 290
Target Start/End: Original strand, 56557289 - 56557424
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| |||||||||||||||||||     
T  56557289 gtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaac 56557388  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    | |||||||||  ||| |||||| |||||| |||||    
T  56557389 ggcctataattagagggatgaaaagcatatttaagc 56557424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 155 - 293
Target Start/End: Complemental strand, 38813690 - 38813552
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | |||| |||| |  ||||| ||| ||||||| |||||||||||| ||| |||||||||||||||     
T  38813690 gtggcagtgattatccgggaagagggacgaactttcaaattattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaac 38813591  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagccaa 293  Q
    | ||||||||| |||| |||||| |||||| ||||||||    
T  38813590 ggcctataattacagggatgaaaagcatatttaagccaa 38813552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 291
Target Start/End: Original strand, 13336863 - 13336938
Alignment:
Q  216 aatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    |||||||||||||||||| ||| ||||||||  |||||||||||||| ||||||| ||||||||||||| ||||||    
T  13336863 aatgggaggattagtaagttcagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatatttaagcc 13336938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 4982987 - 4983061
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattag 229  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||  || ||||| |||| || |||||||||    
T  4982987 gtggcagtgattaagtggggagagggacgaaattttaaatgattaataattgcaaggctaaattgcgaggattag 4983061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 14801880 - 14801798
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattag 229  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    |||||||||||| ||  ||||||||    
T  14801880 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatacaagggtaaattgtcaggattag 14801798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 54590220 - 54590150
Alignment:
Q  214 aaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    ||||||| || ||||||||| |||  ||||||||||||||||||||||||||||||| |||||||||||||    
T  54590220 aaaatggaagaattagtaagttcaaagatgaaaaatcaaatgacctataattgcagggatgaaatgcatat 54590150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 34765664 - 34765717
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  34765664 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 34765717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 38814291 - 38814427
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| ||| |||||||||||||||     
T  38814291 gtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaac 38814390  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    | |||| |||| || | |||||| |||||| ||||||    
T  38814391 ggcctaaaattacaaggatgaaaagcatatttaagcc 38814427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 52816387 - 52816523
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| |||  ||||||||||||||     
T  52816387 gtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagagatgaaaaatcaaac 52816486  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    | ||||||||| |||| ||||||  ||||| ||||||    
T  52816487 ggcctataattacagggatgaaaatcatatttaagcc 52816523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 16605746 - 16605692
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaat 201  Q
    ||||||| |||||||||||||||||||| |||||||||||| |||||||||||||    
T  16605746 ttagtgacgtggcagtgattaagtggggggagggacgaaattttaaatgattaat 16605692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 24349818 - 24349764
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaat 201  Q
    ||||||| |||||||||||||| |||||||||||||||||| |||||||||||||    
T  24349818 ttagtgacgtggcagtgattaactggggagagggacgaaattttaaatgattaat 24349764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 44967329 - 44967375
Alignment:
Q  154 tgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  44967329 tgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 44967375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 53129790 - 53129836
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaa 193  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  53129790 ttagtgatgtggcagtgattaagtggggagagggacgaaattttaaa 53129836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 9145027 - 9145072
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  9145027 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 9145072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 13058173 - 13058128
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  13058173 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 13058128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 23613445 - 23613400
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  23613445 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 23613400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 27934668 - 27934623
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  27934668 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 27934623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 35028282 - 35028335
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  35028282 ttagtgacgtggcagtgattaagtggggagagtgacgaaattttaaatgattaa 35028335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 36009105 - 36009150
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  36009105 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 36009150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 42738292 - 42738337
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  42738292 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 42738337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 43155788 - 43155833
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  43155788 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 43155833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 49879468 - 49879513
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  49879468 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 49879513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 52298169 - 52298112
Alignment:
Q  148 tagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  52298169 tagtgacgtggcagtgattaagtggggagagagacgaaattttaaatgattaaatttt 52298112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 53701956 - 53701903
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  53701956 ttagtgacgtggcagtgattaagtggggagagggaagaaattttaaatgattaa 53701903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 22882352 - 22882420
Alignment:
Q  216 aatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    ||||||||||||| |||| ||| ||||||||  |||||||||||||| ||||||| |||||||||||||    
T  22882352 aatgggaggattattaagttcagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatat 22882420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 22934016 - 22934084
Alignment:
Q  216 aatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    ||||||||||||| |||| ||| ||||||||  |||||||||||||| ||||||| |||||||||||||    
T  22934016 aatgggaggattattaagttcagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatat 22934084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 52815799 - 52815663
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | || |||||| |  ||||| ||| ||||||  |||||||||||| ||| |||| ||||||||||     
T  52815799 gtggcagtgattatccgggaagagggacgaactttcaagtgattagtaattacaggggcaaaatgaaaggattagtaagttcagggataaaaaatcaaac 52815700  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    | ||||||||| |||| |||||| |||||| ||||||    
T  52815699 ggcctataattacagggatgaaaagcatatttaagcc 52815663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 55013089 - 55013188
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||| |  ||||| ||| ||| |||||||||||||||||||| ||||||||||||||||  ||||||||| || | |||||| |||||| |||||    
T  55013089 aaatgattagtaattacaggggcaaactgggaggattagtaagctca-ggatgaaaaatcaaatagcctataattacatggatgaaaagcatatttaagc 55013187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 17356206 - 17356256
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgat 197  Q
    ||||||| ||| ||||||||||||||||||||||||||||| |||||||||    
T  17356206 ttagtgacgtgacagtgattaagtggggagagggacgaaattttaaatgat 17356256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 48528614 - 48528552
Alignment:
Q  149 agtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagg 211  Q
    ||||||||| ||||||||||||||||| ||| ||||||| |||||||||||| |||| |||||    
T  48528614 agtgatgtgacagtgattaagtggggataggaacgaaattttaaatgattaaattttgcaagg 48528552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 5369083 - 5369038
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||    
T  5369083 gtggcagtgattaagtggggagagggacaaaattttaaatgattaa 5369038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 9400780 - 9400825
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  9400780 gtggcagtgattaagtggggagagggatgaaattttaaatgattaa 9400825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 15507957 - 15508010
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| | |||||||||||||||||||||| |||||||| ||||||||||||    
T  15507957 ttagtgacgcggcagtgattaagtggggagagagacgaaattttaaatgattaa 15508010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 18831485 - 18831440
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||    
T  18831485 gtggcagtgattaagtggggagagagacgaaattttaaatgattaa 18831440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 22566935 - 22566890
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  22566935 gtggcagtgattaagtggggagagggatgaaattttaaatgattaa 22566890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 24711247 - 24711202
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||    
T  24711247 gtggtagtgattaagtggggagagggacgaaattttaaatgattaa 24711202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 32950278 - 32950233
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||    
T  32950278 gtggcagtgattaagtggggagagagacgaaattttaaatgattaa 32950233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 33247534 - 33247579
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  33247534 gtggcagtgattaagtggggagagggatgaaattttaaatgattaa 33247579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 34837335 - 34837380
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  34837335 gtggcagtgattaagtggggagagggacgaaattttaaacgattaa 34837380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 37976437 - 37976490
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  ||||||||||||||||||||||| |||||||| ||||||||||||    
T  37976437 ttagtgacatggcagtgattaagtggggagagtgacgaaattttaaatgattaa 37976490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 50418933 - 50418974
Alignment:
Q  159 cagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  50418933 cagtgattaagtggggagagggacgaaattttaaatgattaa 50418974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 52909397 - 52909344
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  |||||||||||||||||||||| ||||||||| ||||||||||||    
T  52909397 ttagtgacatggcagtgattaagtggggagatggacgaaattttaaatgattaa 52909344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 48529862 - 48529918
Alignment:
Q  149 agtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    ||||| |||||||||||||||||| ||||||||| |||| |||||||||||| ||||    
T  48529862 agtgacgtggcagtgattaagtggagagagggacaaaattttaaatgattaaatttt 48529918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 221 - 284
Target Start/End: Complemental strand, 9254476 - 9254413
Alignment:
Q  221 gaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    ||||||||||||| ||| ||||||||  ||||||| |||||| ||||||| |||||||||||||    
T  9254476 gaggattagtaagttcaaggatgaaatttcaaatggcctatatttgcagggatgaaatgcatat 9254413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 37248370 - 37248327
Alignment:
Q  157 ggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||| |||||||| ||||||||||||    
T  37248370 ggcagtgattaagtggggagagcgacgaaattttaaatgattaa 37248327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 41583518 - 41583573
Alignment:
Q  150 gtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    |||| ||||||||||||||||| | ||||||||||||| |||||||||||| ||||    
T  41583518 gtgacgtggcagtgattaagtgagaagagggacgaaattttaaatgattaactttt 41583573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 10781768 - 10781822
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaat 201  Q
    ||||||| ||| ||||| |||| |||||||||||||||||| |||||||||||||    
T  10781768 ttagtgacgtgacagtggttaactggggagagggacgaaattttaaatgattaat 10781822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 16005975 - 16005929
Alignment:
Q  154 tgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||| |||||||||||| |||||||||||||||| ||||||||||||    
T  16005975 tgtgacagtgattaagtagggagagggacgaaattttaaatgattaa 16005929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 38012306 - 38012261
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||    
T  38012306 gtggcagtgattaagtggggagagagacgaaattttaaacgattaa 38012261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 35508533 - 35508577
Alignment:
Q  156 tggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||  ||||||| ||||||||||||    
T  35508533 tggcagtgattaagtggggagagatacgaaattttaaatgattaa 35508577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 54086992 - 54087032
Alignment:
Q  160 agtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||| |||||||| ||||||||||||    
T  54086992 agtgattaagtggggagagagacgaaattttaaatgattaa 54087032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 40387608 - 40387553
Alignment:
Q  150 gtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    |||| ||||||||||||||||| | ||||| ||||||| |||||||||||| ||||    
T  40387608 gtgacgtggcagtgattaagtgagaagaggaacgaaattttaaatgattaactttt 40387553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 50246173 - 50246228
Alignment:
Q  222 aggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaa 277  Q
    |||||||||||  ||||||| ||||| |||||||||||||| ||||||| ||||||    
T  50246173 aggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaa 50246228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 7280390 - 7280448
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    ||||||| |||||||||||||||||||||||| |||  ||| |||| ||||||| ||||    
T  7280390 ttagtgacgtggcagtgattaagtggggagagagacataattttaagtgattaaatttt 7280448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 14802019 - 14802073
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaat 201  Q
    |||||||||||||||||||||||| ||   | ||||||||| |||||||||||||    
T  14802019 ttagtgatgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaat 14802073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 22249993 - 22249940
Alignment:
Q  224 gattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaa 277  Q
    |||||||||  ||| ||||||||| |||||||||||||| ||||||| ||||||    
T  22249993 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaa 22249940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 24411502 - 24411449
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| |||| |||||||||||||| |||||||||||   ||||||||||||    
T  24411502 ttagtgacgtgggagtgattaagtgggaagagggacgaatctttaaatgattaa 24411449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 51692685 - 51692644
Alignment:
Q  159 cagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| ||||||||||||||||||||| |||| |||||||    
T  51692685 cagtgatcaagtggggagagggacgaaattttaagtgattaa 51692644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 55867406 - 55867451
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||| |||| | ||||||||||| ||||||||||||    
T  55867406 gtggcagtgattaactgggaatagggacgaaattttaaatgattaa 55867451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 8439516 - 8439572
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagg 211  Q
    ||||| |||||||||||||   ||||||||||| ||||||||||||| ||| |||||    
T  8439516 gtggcggtgattaagtgggtcaagggacgaaattttaaatgattaatgtttgcaagg 8439572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 54435381 - 54435433
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgatta 199  Q
    |||||||||||  |||||||||| ||| ||||||||||||| |||||| ||||    
T  54435381 ttagtgatgtgttagtgattaagggggaagagggacgaaattttaaataatta 54435433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 32717069 - 32717205
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||| ||||| |||| ||||||||||||| |||||||||||||||||||| ||| ||||||| |||||||||||| | | ||||||||||||||||    
T  32717069 gtggcagtaattaattgggaagagggacgaaattttaaatgattaatttttacaggggcaaaatggaaggattagtaagtttagggatgaaaaatcaaat 32717168  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    ||||||||||| |||| ||||||||||||| ||||||    
T  32717169 gacctataattacagggatgaaatgcatatttaagcc 32717205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 138 - 284
Target Start/End: Complemental strand, 29192188 - 29192042
Alignment:
Q  138 tttgctgacttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctca 237  Q
    |||||| | ||| ||| ||||||||||||||  ||| ||||||||||||| |||||||||||||||||||| ||| |||| || ||||||||||||||||    
T  29192188 tttgctaatttaatgacgtggcagtgattaatcgggaagagggacgaaattttaaatgattaatttttacaggggcaaaacggaaggattagtaagctca 29192089  T
Q  238 tggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
     | ||||||||||||||| ||||||||| |||| |||||||||||||    
T  29192088 ggaatgaaaaatcaaatggcctataattacagggatgaaatgcatat 29192042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 159 - 291
Target Start/End: Original strand, 29192961 - 29193093
Alignment:
Q  159 cagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacc 258  Q
    ||||||||||  ||| |||||||| |||| |||||| ||||||||||||| |||  ||||||||||||||||||||||| ||||||||||||||||| ||    
T  29192961 cagtgattaatcgggaagagggacaaaattttaaataattaatttttacaggggcgaaatgggaggattagtaagctcagggatgaaaaatcaaatggcc 29193060  T
Q  259 tataattgcaggaatgaaatgcatatgtaagcc 291  Q
    ||||||| |||| ||||||||||||| ||||||    
T  29193061 tataattacagggatgaaatgcatatttaagcc 29193093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 2944049 - 2943913
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    ||||||||||||||  ||| ||||||||||| | | |||||||||| ||||||| ||| ||||| |||||||||||||||||| |||||||||||||||     
T  2944049 gtggcagtgattaaccgggaagagggacgaactttcaaatgattaacttttacaggggcaaaataggaggattagtaagctca-ggatgaaaaatcaaac 2943951  T
Q  255 gacctataattgcaggaat-gaaatgcatatgtaagcc 291  Q
    | |||||||||||||| || |||| |||||| ||||||    
T  2943950 ggcctataattgcagggatagaaaagcatatttaagcc 2943913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 155 - 284
Target Start/End: Complemental strand, 37249335 - 37249206
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||||||||||||||| | | ||||||||| |  ||||| ||| ||||||||||||||| |||||||| |||||||||||||||     
T  37249335 gtggcagtgattatccggggagagggacgaactttcaaatgattagtaattacaggggcaaaatgggaggattaataagctcagggatgaaaaatcaaac 37249236  T
Q  255 gacctataattgcaggaatgaaatgcatat 284  Q
    | |||||||||||||| |||||| ||||||    
T  37249235 ggcctataattgcagggatgaaaagcatat 37249206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 32716385 - 32716285
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    ||||||||||||||   || ||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||| |||| |||| |||||||||||    
T  32716385 gtggcagtgattaatctggaagagggacgaaattttaaatggttaatttttacaagggtaaaatgagaggattagtaaactcaaggataaaaaatcaaat 32716286  T
Q  255 g 255  Q
    |    
T  32716285 g 32716285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 155 - 284
Target Start/End: Original strand, 37249762 - 37249890
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||||||| | |||||||||||||||||||||| |||||||||||||||     
T  37249762 gtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaagggcagaatgggaggattagtaagctcagggatgaaaaatcaaac 37249861  T
Q  255 gacctataattgcaggaatgaaatgcatat 284  Q
    | |||||||||||||| |||||| ||||||    
T  37249862 ggcctataattgcagg-atgaaaagcatat 37249890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 22736690 - 22736790
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||| |  ||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||  ||||| |||||    
T  22736690 aaatgattagtaattacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatgacctataattacagggatgaaaaacatatttaagc 22736789  T
Q  291 c 291  Q
    |    
T  22736790 c 22736790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 155 - 293
Target Start/End: Original strand, 45279248 - 45279386
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| ||| |||||||||||||||     
T  45279248 gtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaac 45279347  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagccaa 293  Q
    | ||||||||| |||| |||||| |||||| ||||||||    
T  45279348 ggcctataattacagggatgaaaagcatatttaagccaa 45279386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 191 - 284
Target Start/End: Original strand, 44481953 - 44482046
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    ||||||||| |  ||||| ||| |||||||||||||||||||||||||||||||||||||||||| || |||||| |||| |||||| ||||||    
T  44481953 aaatgattagtaattacaggggcaaaatgggaggattagtaagctcatggatgaaaaatcaaatggcccataattacagggatgaaaagcatat 44482046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 48189063 - 48189199
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||||||| |||||||||||||||     
T  48189063 gtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagctcagggatgaaaaatcaaac 48189162  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    | ||||||||| || | |||||| |||||| ||||||    
T  48189163 ggcctataattacaaggatgaaaagcatatttaagcc 48189199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 23458263 - 23458316
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23458263 ttagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 23458316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 2944630 - 2944766
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| |||||||  ||||||||||| ||| |||||||||||||||     
T  2944630 gtggcagtgattattcgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggatggattagtaagttcagggatgaaaaatcaaac 2944729  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    | ||||||||| |||| |||||| |||||| ||||||    
T  2944730 ggcctataattacagggatgaaaagcatatttaagcc 2944766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 155 - 265
Target Start/End: Complemental strand, 1756686 - 1756576
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| |||||||||||||||||||     
T  1756686 gtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaac 1756587  T
Q  255 gacctataatt 265  Q
    | |||||||||    
T  1756586 ggcctataatt 1756576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 293
Target Start/End: Original strand, 11026616 - 11026734
Alignment:
Q  175 agagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatg 274  Q
    ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||| ||||| ||| ||||||||||||||| | ||||||||| |||| |||    
T  11026616 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattggtaagttcagggatgaaaaatcaaacggcctataattacagggatg 11026715  T
Q  275 aaatgcatatgtaagccaa 293  Q
    ||| |||||| ||||||||    
T  11026716 aaaagcatatttaagccaa 11026734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 33689663 - 33689745
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattag 229  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |  | |||||||||| ||  ||||||||    
T  33689663 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaataatgcaagggtaaattgccaggattag 33689745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 155 - 277
Target Start/End: Complemental strand, 48188514 - 48188392
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| ||| |||||||||||||||     
T  48188514 gtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaac 48188415  T
Q  255 gacctataattgcaggaatgaaa 277  Q
    | ||||||||| |||| ||||||    
T  48188414 ggcctataattacagggatgaaa 48188392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 155 - 284
Target Start/End: Complemental strand, 45278680 - 45278551
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||  ||| |||||||||||||||     
T  45278680 gtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaaattcagggatgaaaaatcaaac 45278581  T
Q  255 gacctataattgcaggaatgaaatgcatat 284  Q
    | ||||||||| |||| |||||| ||||||    
T  45278580 ggcctataattacagggatgaaaagcatat 45278551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 1757304 - 1757404
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||| |  ||||| ||| ||||||| |||||||||||| ||||||||||||||||||| | ||||||||| |||| ||||||  ||||| |||||    
T  1757304 aaatgattagtaattacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctataattacagggatgaaaatcatatttaagc 1757403  T
Q  291 c 291  Q
    |    
T  1757404 c 1757404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 41988106 - 41988048
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    ||||||||||||||||||||||||| |||||| |||||||| |||||||||||| ||||    
T  41988106 ttagtgatgtggcagtgattaagtgaggagagagacgaaattttaaatgattaaatttt 41988048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 200
Target Start/End: Original strand, 51994173 - 51994223
Alignment:
Q  150 gtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  51994173 gtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 51994223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 2796315 - 2796270
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  2796315 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 2796270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 8041752 - 8041707
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  8041752 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 8041707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 10770752 - 10770797
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  10770752 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 10770797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 26463882 - 26463935
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  26463882 ttagtgacgtgacagtgattaagtggggagagggacgaaattttaaatgattaa 26463935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 33156278 - 33156331
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||||||||||||    
T  33156278 ttagtgacgtggcagtgattaagtggggggagggacgaaattttaaatgattaa 33156331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 36314559 - 36314604
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  36314559 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 36314604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 40758288 - 40758235
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||||||||||    
T  40758288 ttagtgacgtggtagtgattaagtggggagagggacgaaattttaaatgattaa 40758235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 48322638 - 48322683
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  48322638 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 48322683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 54466559 - 54466514
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  54466559 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 54466514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 277
Target Start/End: Complemental strand, 44476126 - 44476063
Alignment:
Q  214 aaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaa 277  Q
    |||||||||||||||||||| ||| ||||||||||||||||| || |||||| |||| ||||||    
T  44476126 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcccataattacagggatgaaa 44476063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 43105818 - 43105920
Alignment:
Q  175 agagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatg 274  Q
    ||||||||||| | | ||||||||| |  ||||| ||| ||||||  |||||||||||| ||| ||||||||||||||| | ||||||||| |||| |||    
T  43105818 agagggacgaactttcaaatgattagtaattacaggggcaaaatgaaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatg 43105917  T
Q  275 aaa 277  Q
    |||    
T  43105918 aaa 43105920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 9294254 - 9294295
Alignment:
Q  159 cagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  9294254 cagtgattaagtggggagagggacgaaattttaaatgattaa 9294295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 19741184 - 19741229
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||    
T  19741184 gtggcagtgattaagtggggagagtgacgaaattttaaatgattaa 19741229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 46474950 - 46474906
Alignment:
Q  156 tggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||    
T  46474950 tggcagtgattaagtggggagagggacaaaattttaaatgattaa 46474906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 9367885 - 9367831
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaat 201  Q
    ||||||| |||||||||||||| ||||  |||||||||||| |||||||||||||    
T  9367885 ttagtgacgtggcagtgattaattgggatgagggacgaaattttaaatgattaat 9367831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 277
Target Start/End: Original strand, 21255815 - 21255901
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaa 277  Q
    ||||||||||| ||||||| || ||||||| || ||||||||  | ||||| ||||| |||||||| ||||| ||||||||| ||||    
T  21255815 aaatgattaatatttacaatggcaaaatggaagcattagtaactttatggacgaaaattcaaatgatctatatttgcaggaacgaaa 21255901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 30380990 - 30380932
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    ||||||| ||||||||||| ||||||  ||||||||||||| |||||||||||| ||||    
T  30380990 ttagtgacgtggcagtgatcaagtggacagagggacgaaattttaaatgattaaatttt 30380932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 39399376 - 39399434
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    ||||||| |||||||||||||| ||||||||| || ||||| |||||||||||| ||||    
T  39399376 ttagtgacgtggcagtgattaactggggagagagatgaaattttaaatgattaaatttt 39399434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 40033747 - 40033793
Alignment:
Q  154 tgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||| |||||||||||||||||||||||| |||| ||||||||||||    
T  40033747 tgtgacagtgattaagtggggagagggacaaaattttaaatgattaa 40033793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 54317915 - 54317973
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    ||||||| |||||||||||||| | ||||||| |||||||| |||||||||||| ||||    
T  54317915 ttagtgacgtggcagtgattaattagggagagagacgaaattttaaatgattaaatttt 54317973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 11026072 - 11025975
Alignment:
Q  156 tggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaa 253  Q
    |||||||||||||  ||| ||||||||||| | | ||||||||| |  ||| |  || ||||||| |||||||||||| ||| |||||||||||||||    
T  11026072 tggcagtgattaaccgggaagagggacgaactttcaaatgattagtaattatagaggcaaaatggaaggattagtaagttcagggatgaaaaatcaaa 11025975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 43384415 - 43384374
Alignment:
Q  159 cagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  43384415 cagtgattaagtggggagagagacgaaattttaaatgattaa 43384374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 55052540 - 55052585
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||    
T  55052540 gtggtagtgattaaatggggagagggacgaaattttaaatgattaa 55052585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 1741487 - 1741387
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||||| ||| |||||| | | ||| |||||||||||  ||| ||| ||||| |||||||||||||| ||||||| | ||||  ||||| |||||    
T  1741487 aaatgattaatatttgcaagggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 1741388  T
Q  291 c 291  Q
    |    
T  1741387 c 1741387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 4521765 - 4521824
Alignment:
Q  147 ttagtgatgtggcagtgattaagtgggg-agagggacgaaatcttaaatgattaattttt 205  Q
    |||||||| |||| |||||||||||||| ||||||||||||| |||| ||||||| ||||    
T  4521765 ttagtgatctggcggtgattaagtgggggagagggacgaaattttaagtgattaaatttt 4521824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 44654790 - 44654845
Alignment:
Q  150 gtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    |||| ||| |||||||||| |||||||||||||||||| |||| ||||||| ||||    
T  44654790 gtgacgtgacagtgattaaatggggagagggacgaaattttaagtgattaaatttt 44654845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 20704611 - 20704669
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    ||||||| ||| | ||||||||||||| ||||||||||||| |||| ||||||| ||||    
T  20704611 ttagtgacgtgactgtgattaagtgggaagagggacgaaattttaagtgattaaatttt 20704669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 20704561 - 20704516
Alignment:
Q  160 agtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    |||||||||||||||||||||||| ||| |||| ||||||| ||||    
T  20704561 agtgattaagtggggagagggacggaattttaagtgattaaatttt 20704516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 21300393 - 21300340
Alignment:
Q  224 gattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaa 277  Q
    |||||||||  ||| ||||||||| |||||||||||||| ||||||| ||||||    
T  21300393 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaa 21300340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 40506083 - 40506124
Alignment:
Q  159 cagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||| |||||| |||||||| ||||||||||||    
T  40506083 cagtgattaagtgcggagagagacgaaattttaaatgattaa 40506124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 42854569 - 42854511
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaa 215  Q
    |||||||||||||||||| |||||  ||||||| |||||||||||| |||| ||| |||||    
T  42854569 gtggcagtgattaagtggagagag--acgaaattttaaatgattaaattttgcaaaggtaa 42854511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 43105320 - 43105259
Alignment:
Q  204 ttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataatt 265  Q
    ||||| ||| ||||||  |||||||||||| ||| ||||||||||||||| | |||||||||    
T  43105320 ttacaggggcaaaatgaaaggattagtaagttcagggatgaaaaatcaaacggcctataatt 43105259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 262
Target Start/End: Original strand, 46670537 - 46670610
Alignment:
Q  189 ttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctata 262  Q
    ||||||||||||| ||| ||| |  ||||||| || ||||||||  ||| ||||||||| ||||||||||||||    
T  46670537 ttaaatgattaatatttgcaatgacaaaatggaagaattagtaacttcagggatgaaaattcaaatgacctata 46670610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 55036771 - 55036690
Alignment:
Q  189 ttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcagg 270  Q
    ||||||||||||| ||| || ||| | | ||| |||||||||||  ||| | ||||||| |||||||||||||| |||||||    
T  55036771 ttaaatgattaatatttgcaggggcagattggaaggattagtaacttcaggaatgaaaattcaaatgacctatatttgcagg 55036690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 21185987 - 21186047
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaa 215  Q
    ||||| |||||||||||||   ||||||||||| ||||||||||||  ||| |||||||||    
T  21185987 gtggcggtgattaagtgggtcaagggacgaaattttaaatgattaaggtttgcaagggtaa 21186047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 22735459 - 22735403
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaa 247  Q
    ||||||||| |  ||||| ||| |||||||||||||||||||||| | |||||||||    
T  22735459 aaatgattagtaattacaggggcaaaatgggaggattagtaagcttagggatgaaaa 22735403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 23458123 - 23458059
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagg 211  Q
    ||||||| |||||||||||||||| ||   | ||||||||| |||||||||||||| || |||||    
T  23458123 ttagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaattattgcaagg 23458059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 5e-35; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 191 - 290
Target Start/End: Complemental strand, 1231626 - 1231527
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||| ||||||||||||| |||||    
T  1231626 aaatgattaatttttacaggggtaaaatgggaggattagtaagctcatggatgaaaaatcaaagggcctataattgtagggatgaaatgcatatttaagc 1231527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 34213900 - 34213764
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    ||||||||||||||  ||| ||||||||||| | | |||||||||| ||||||| ||| ||||| |||||||||||||||||| |||||||||||||||     
T  34213900 gtggcagtgattaaccgggaagagggacgaactttcaaatgattaacttttacaggggcaaaataggaggattagtaagctcagggatgaaaaatcaaac 34213801  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    | |||||||||||||| |||||| |||||| ||||||    
T  34213800 ggcctataattgcagggatgaaaagcatatttaagcc 34213764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 7393145 - 7393233
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatg 279  Q
    ||||||||||| ||| || || ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||    
T  7393145 aaatgattaatatttgcagggataaaatgggaggattagtaagttcagggatgaaaaatcaaatgacctataattgcagggatgaaatg 7393233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 25288076 - 25288176
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||||| ||| || ||| |||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||  ||||||||||||| |||||    
T  25288076 aaatgattaatatttgcaggggcaaaatgagaggattagtaagttcagggatgaaaaatcaaatgacctataattgcagtgatgaaatgcatatttaagc 25288175  T
Q  291 c 291  Q
    |    
T  25288176 c 25288176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 38599064 - 38598964
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||||| ||| || ||| |||||| ||||||||||||| ||| ||||||||||||||||| |||||||||||||| ||||||||||||| |||||    
T  38599064 aaatgattaatatttgcaggggcaaaatgagaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagc 38598965  T
Q  291 c 291  Q
    |    
T  38598964 c 38598964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 214 - 291
Target Start/End: Original strand, 33497639 - 33497716
Alignment:
Q  214 aaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| |||||| ||||||    
T  33497639 aaaatgggaggattagtaagctcatggatgaaaaatcaaatgccctataattacagggatgaaaagcatatttaagcc 33497716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 1232799 - 1232897
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    |||||||||||||||||| ||| |||||||||||||    ||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||| |||||    
T  1232799 aaatgattaatttttacaggggcaaaatgggaggatac--aagctcagggatgaaaaatcaaatggcctataattacagggatgaaatgcatatttaagc 1232896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 34665906 - 34665770
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| ||| |||||||||||||||     
T  34665906 gtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaac 34665807  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    | ||||||||| |||| |||||| |||||| ||||||    
T  34665806 ggcctataattacagggatgaaaagcatatttaagcc 34665770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 151 - 291
Target Start/End: Original strand, 34214488 - 34214629
Alignment:
Q  151 tgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatgga-tgaaaaat 249  Q
    |||||||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| ||| ||| ||||||||    
T  34214488 tgatgtggcagtgattattcgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggattgaaaaat 34214587  T
Q  250 caaatgacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    |||| | ||||||||| |||| |||||| |||||| ||||||    
T  34214588 caaacggcctataattacagggatgaaaagcatatttaagcc 34214629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 191 - 293
Target Start/End: Complemental strand, 24377281 - 24377179
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||| ||||| ||| || ||| |||||||||||||||||||| ||| ||||||||  ||||||||||  |||||||| ||||||||||||||| | |||    
T  24377281 aaatgcttaatatttgcaggggaaaaatgggaggattagtaagttcagggatgaaacttcaaatgacccctaattgcaagaatgaaatgcatattttagc 24377182  T
Q  291 caa 293  Q
    |||    
T  24377181 caa 24377179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 16388810 - 16388863
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  16388810 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 16388863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 36928620 - 36928567
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  36928620 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 36928567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 31608797 - 31608849
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgatta 199  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  31608797 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgatta 31608849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 24379019 - 24379089
Alignment:
Q  214 aaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    ||||| |||||||||||||| ||| |||||||| |||||||||||  |||||||||| |||||||||||||    
T  24379019 aaaataggaggattagtaagttcaaggatgaaatatcaaatgacccctaattgcagggatgaaatgcatat 24379089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 33497100 - 33497030
Alignment:
Q  207 caagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaa 277  Q
    |||||| ||||||| |||||||||||| ||| | ||||||||||||||||||||||||| || ||||||||    
T  33497100 caagggcaaaatggaaggattagtaagttcaagaatgaaaaatcaaatgacctataattacatgaatgaaa 33497030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 38862755 - 38862709
Alignment:
Q  154 tgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  38862755 tgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 38862709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 1425314 - 1425359
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  1425314 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 1425359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 3041717 - 3041762
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  3041717 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 3041762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 191 - 284
Target Start/End: Complemental strand, 4970225 - 4970132
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    ||||| ||||| ||| || ||| ||||||| |||||||||||| ||| ||||||||  ||||||||||  |||||||||| |||||||||||||    
T  4970225 aaatgcttaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaatttcaaatgacccctaattgcagggatgaaatgcatat 4970132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 13186204 - 13186151
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  13186204 ttagtgacgtggcagtgattaagtggggagagagacgaaattttaaatgattaa 13186151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 23663806 - 23663851
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  23663806 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 23663851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 35756726 - 35756673
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  |||||||||||||||||||||||||||||||| ||||||||||||    
T  35756726 ttagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaa 35756673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 36186351 - 36186404
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||| |||||||||||||||||| |||||||||||||||| ||||||||||||    
T  36186351 ttagtaatgtggcagtgattaagtagggagagggacgaaattttaaatgattaa 36186404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 36325370 - 36325325
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  36325370 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 36325325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 38845560 - 38845605
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  38845560 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 38845605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 39071820 - 39071767
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| | ||||||||||||||||||||||||||||||| ||||||||||||    
T  39071820 ttagtgacgcggcagtgattaagtggggagagggacgaaattttaaatgattaa 39071767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 40775911 - 40775956
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  40775911 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 40775956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 44407118 - 44407163
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  44407118 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 44407163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 291
Target Start/End: Original strand, 4463455 - 4463526
Alignment:
Q  220 ggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    |||||||||||||| ||| ||||||||  ||||||| |||||| ||||||| ||||||||||||| ||||||    
T  4463455 ggaggattagtaagttcagggatgaaatttcaaatggcctatacttgcagggatgaaatgcatatttaagcc 4463526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 12199210 - 12199257
Alignment:
Q  154 tgtggcagtgattaagtggggagagggacgaaatcttaaatgattaat 201  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  12199210 tgtggcagtgattaagtggggagagagacgaaattttaaatgattaat 12199257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 12443638 - 12443685
Alignment:
Q  154 tgtggcagtgattaagtggggagagggacgaaatcttaaatgattaat 201  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  12443638 tgtggcagtgattaagtggggagagagacgaaattttaaatgattaat 12443685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 29574819 - 29574749
Alignment:
Q  214 aaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    ||||||| |||||||||||| | | ||||||||  |||||||||||||| ||||||| |||||||||||||    
T  29574819 aaaatggaaggattagtaagtttagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatat 29574749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 34666505 - 34666614
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| ||| |||||||||||||||     
T  34666505 gtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattaca-gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaac 34666603  T
Q  255 gacctataatt 265  Q
    | |||||||||    
T  34666604 ggcctataatt 34666614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 2266628 - 2266583
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  2266628 gtggcagtgattaagtggggagagggacgaaattttaaacgattaa 2266583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 4405944 - 4405997
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| ||| ||||||||||||||| ||||||||||||| ||||||||||||    
T  4405944 ttagtgacgtgacagtgattaagtgggaagagggacgaaattttaaatgattaa 4405997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 8316880 - 8316925
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||    
T  8316880 gtggcagtgattaagtggggagatggacgaaattttaaatgattaa 8316925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 22915650 - 22915695
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||    
T  22915650 gtggcagtgattaagtggggagagggacggaattttaaatgattaa 22915695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 23698540 - 23698581
Alignment:
Q  159 cagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  23698540 cagtgattaagtggggagagggacgaaattttaaatgattaa 23698581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 35449871 - 35449915
Alignment:
Q  156 tggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||    
T  35449871 tggcagtgattaaatggggagagggacgaaattttaaatgattaa 35449915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 200
Target Start/End: Original strand, 12273147 - 12273190
Alignment:
Q  157 ggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  12273147 ggcagtgattaagtgggaagagggacgaaattttaaatgattaa 12273190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 7392308 - 7392250
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaat 249  Q
    ||||||||||| ||| || || ||||||||||||||||||||| ||| |||||||||||    
T  7392308 aaatgattaatatttgcagggataaaatgggaggattagtaagttcagggatgaaaaat 7392250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 27436630 - 27436560
Alignment:
Q  224 gattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagccaat 294  Q
    |||||||||  ||| ||| ||||| ||||| |||||||| ||||||| ||||||||||||| |||||||||    
T  27436630 gattagtaacttcagggacgaaaattcaaacgacctatatttgcagggatgaaatgcatatttaagccaat 27436560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 31873183 - 31873241
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    |||||||||| |||||||||||||||| ||||| || |||| |||||||||||| ||||    
T  31873183 ttagtgatgtagcagtgattaagtgggaagaggaacaaaattttaaatgattaaatttt 31873241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 38955840 - 38955794
Alignment:
Q  154 tgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  38955840 tgtggcagtgattaagtgaggagagggatgaaattttaaatgattaa 38955794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 200
Target Start/End: Complemental strand, 2534835 - 2534786
Alignment:
Q  151 tgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||| |||| | ||||||||||| ||||||||||||    
T  2534835 tgatgtggcagtgattaactgggaatagggacgaaattttaaatgattaa 2534786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 11674830 - 11674786
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  11674830 gtggcagtgattaagtggg-agagggacgaaattttaaatgattaa 11674786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 40318248 - 40318301
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  |||||||||||||||| ||||| ||||||||| ||||||||||||    
T  40318248 ttagtgacatggcagtgattaagtgaggagaaggacgaaattttaaatgattaa 40318301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 8747556 - 8747616
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaa 215  Q
    ||||| |||||||||||||   ||||||||||| ||||||||||||| ||| |||||||||    
T  8747556 gtggcggtgattaagtgggttaagggacgaaattttaaatgattaatgtttgcaagggtaa 8747616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 22890278 - 22890330
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgatta 199  Q
    ||||||||||| ||||||||||||||| |||||||| |||| |||| ||||||    
T  22890278 ttagtgatgtgacagtgattaagtgggaagagggacaaaattttaagtgatta 22890330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 11291195 - 11291253
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    ||||||||||||||||||||||||| ||||||  || |||| |||| ||||||| ||||    
T  11291195 ttagtgatgtggcagtgattaagtgaggagagatacaaaattttaagtgattaaatttt 11291253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 24085918 - 24085860
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    ||||||| ||| |||||||||||||||||||||||| |||| ||||  |||||| ||||    
T  24085918 ttagtgacgtgacagtgattaagtggggagagggacaaaattttaagcgattaaatttt 24085860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 36574890 - 36574824
Alignment:
Q  218 tgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    |||||||||||||||| ||| ||||||||  ||||||| ||||||  |||||  |||||||||||||    
T  36574890 tgggaggattagtaagttcagggatgaaatttcaaatgccctatatatgcagagatgaaatgcatat 36574824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 547695 - 547642
Alignment:
Q  224 gattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaa 277  Q
    |||||||||  ||| ||| ||||| |||||||||||||||||||||| ||||||    
T  547695 gattagtaacttcaaggacgaaaattcaaatgacctataattgcagggatgaaa 547642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 200
Target Start/End: Original strand, 2535838 - 2535887
Alignment:
Q  151 tgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||| ||||||||||   ||||||||||| ||||||||||||    
T  2535838 tgatgtggcagtcattaagtgggtcaagggacgaaattttaaatgattaa 2535887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 4994957 - 4994994
Alignment:
Q  163 gattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  4994957 gattaagtggggagagggacgaaatttgaaatgattaa 4994994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 268
Target Start/End: Complemental strand, 9632428 - 9632351
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgca 268  Q
    ||||||||||| ||| ||| |  ||||||| |||||||||||  ||| ||| ||||| |||||||||||||| |||||    
T  9632428 aaatgattaatatttgcaatgacaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgca 9632351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 293
Target Start/End: Original strand, 27437552 - 27437621
Alignment:
Q  224 gattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagccaa 293  Q
    |||||||||  ||| ||| ||||| ||||| | |||||| ||||||| ||||||||||||| ||||||||    
T  27437552 gattagtaacttcagggacgaaaattcaaacggcctatatttgcagggatgaaatgcatatttaagccaa 27437621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 200
Target Start/End: Original strand, 34177258 - 34177307
Alignment:
Q  151 tgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||| ||||||||||   ||||||||||| ||||||||||||    
T  34177258 tgatgtggcagtcattaagtgggtcaagggacgaaattttaaatgattaa 34177307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 36623613 - 36623560
Alignment:
Q  224 gattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaa 277  Q
    |||||||||  ||| ||||||||| |||||||||||||| ||||||| ||||||    
T  36623613 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaa 36623560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 37343042 - 37342989
Alignment:
Q  224 gattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaa 277  Q
    |||||||||  ||| ||||||||| |||||||||||||| ||||||| ||||||    
T  37343042 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaa 37342989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 43866835 - 43866888
Alignment:
Q  224 gattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaa 277  Q
    |||||||||  ||| ||||||||| |||||||||||||| ||||||| ||||||    
T  43866835 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaa 43866888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 9499883 - 9499962
Alignment:
Q  148 tagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggatta 228  Q
    |||||| ||| |||||||||||||||| ||||||  |||| |||||||||||| ||||   |||||||||||  |||||||    
T  9499883 tagtgacgtgacagtgattaagtgggg-gagggatcaaattttaaatgattaaattttgggagggtaaaatgtcaggatta 9499962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 26740033 - 26740081
Alignment:
Q  222 aggattagtaagctcatggatgaaaaatcaaatgacctataattgcagg 270  Q
    |||||||||||  ||||||| ||||| |||||||||||||| |||||||    
T  26740033 aggattagtaacttcatggacgaaaattcaaatgacctatatttgcagg 26740081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 29575910 - 29575978
Alignment:
Q  216 aatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    |||||||||||||||||  | | ||||||||  |||||||  ||||| ||||||| |||||||||||||    
T  29575910 aatgggaggattagtaaatttagggatgaaatttcaaatggactatatttgcagggatgaaatgcatat 29575978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 30712003 - 30712055
Alignment:
Q  149 agtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaat 201  Q
    |||||||||||||| ||||| ||||   ||||||||||| |||||||||||||    
T  30712003 agtgatgtggcagtaattaactgggttcagggacgaaattttaaatgattaat 30712055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 30719780 - 30719832
Alignment:
Q  149 agtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaat 201  Q
    |||||||||||||| ||||| ||||   ||||||||||| |||||||||||||    
T  30719780 agtgatgtggcagtaattaactgggttcagggacgaaattttaaatgattaat 30719832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 261101 - 261001
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||||| ||| || ||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  261101 aaatgattaatatttgcaggggcaaaatgggaggattagtaaattcatggatgaaaaatcaaatgacctataattgcagggatgaaatgcatatttaagc 261002  T
Q  291 c 291  Q
    |    
T  261001 c 261001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 262439 - 262541
Alignment:
Q  189 ttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaa 288  Q
    ||||||||||||| ||| || ||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||| ||||||||||||| |||    
T  262439 ttaaatgattaatatttgcaggggaaaaatgggaggattagtaagttcagggatgaaaaatcaaatgacctataattacagggatgaaatgcatatttaa 262538  T
Q  289 gcc 291  Q
    |||    
T  262539 gcc 262541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 7e-31; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 151 - 291
Target Start/End: Original strand, 4117507 - 4117647
Alignment:
Q  151 tgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatc 250  Q
    ||||||||||||||||||  | | ||||||||||| | | |||||||||| ||||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  4117507 tgatgtggcagtgattaaccgagaagagggacgaattttcaaatgattaacttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatc 4117606  T
Q  251 aaatgacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    ||| | ||||||||| |||| ||||||  ||||| ||||||    
T  4117607 aaacggcctataattacagggatgaaaaacatatttaagcc 4117647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 14656615 - 14656480
Alignment:
Q  156 tggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatg 255  Q
    |||||||||||||  ||| ||||||||||| | | |||||||||| ||||||| ||| ||||| |||||||||||||||||| |||||||||||||||      
T  14656615 tggcagtgattaaccgggaagagggacgaactttcaaatgattaacttttacaggggcaaaataggaggattagtaagctcagggatgaaaaatcaaaca 14656516  T
Q  256 acctataattgcaggaatgaaatgcatatgtaagcc 291  Q
     |||||||||||||| |||||| |||||| ||||||    
T  14656515 gcctataattgcagggatgaaaagcatatttaagcc 14656480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 153 - 291
Target Start/End: Complemental strand, 4116937 - 4116799
Alignment:
Q  153 atgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaa 252  Q
    ||||||||||||||||  | | ||||||||||| | | |||||||||| ||||||| ||| |||||||||||||||||||||||| ||||||||||||||    
T  4116937 atgtggcagtgattaaccgagaagagggacgaattttcaaatgattaacttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaa 4116838  T
Q  253 atgacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    | | ||||||||| |||| ||||||  ||||| ||||||    
T  4116837 acggcctataattacagggatgaaaaacatatttaagcc 4116799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 17784385 - 17784485
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||||| ||| || ||| |||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||| |||||| |||||| |||||    
T  17784385 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcatggatgaaaaatcaaatggcctatcattgcagggatgaaaagcatatttaagc 17784484  T
Q  291 c 291  Q
    |    
T  17784485 c 17784485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 33401126 - 33401226
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    |||||||||| ||||||| ||| |||||||||||||||||||| ||| ||||||||||||||| | |||||||||||||| |||||| |||||| |||||    
T  33401126 aaatgattaacttttacaggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaacggcctataattgcagggatgaaaagcatatttaagc 33401225  T
Q  291 c 291  Q
    |    
T  33401226 c 33401226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 8427388 - 8427458
Alignment:
Q  214 aaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 284  Q
    ||||||||||||||||||||  || |||||||||||||||||||||||||||||||| |||||||||||||    
T  8427388 aaaatgggaggattagtaagtccagggatgaaaaatcaaatgacctataattgcagggatgaaatgcatat 8427458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 155 - 293
Target Start/End: Complemental strand, 33400102 - 33399964
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| ||| |||||||||||||||     
T  33400102 gtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaac 33400003  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagccaa 293  Q
    | ||||||||| |||| |||||| |||||| ||||||||    
T  33400002 ggcctataattacagggatgaaaagcatatttaagccaa 33399964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 1661414 - 1661516
Alignment:
Q  175 agagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatg 274  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| ||| ||||||||||||||| | ||||||||| |||| |||    
T  1661414 agagggacgaactttcaaatgattagtaattacaggggtaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatg 1661513  T
Q  275 aaa 277  Q
    |||    
T  1661514 aaa 1661516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 14657173 - 14657309
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaat 254  Q
    |||||||||||||   ||| ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| ||| |||| ||||||||||     
T  14657173 gtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaaggtcagggataaaaaatcaaac 14657272  T
Q  255 gacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    | |||||||||  ||| |||||| |||||| ||||||    
T  14657273 ggcctataattatagggatgaaaagcatatttaagcc 14657309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 12080780 - 12080727
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  |||||||||||||||||||||||||||||||| ||||||||||||    
T  12080780 ttagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaa 12080727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 21627997 - 21628050
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| |||||||||||||||||||||||||||| |||| ||||||||||||    
T  21627997 ttagtgacgtggcagtgattaagtggggagagggacaaaattttaaatgattaa 21628050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 28000646 - 28000691
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  28000646 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 28000691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 30337585 - 30337540
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  30337585 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 30337540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 30804005 - 30803952
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  |||||||||||||||||||||||||||||||| ||||||||||||    
T  30804005 ttagtgagatggcagtgattaagtggggagagggacgaaattttaaatgattaa 30803952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 33517678 - 33517625
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| || |||||||||||||||||||||||||||||| ||||||||||||    
T  33517678 ttagtgacgtagcagtgattaagtggggagagggacgaaattttaaatgattaa 33517625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 1215150 - 1215208
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    ||||||| ||||||||||||||||||||| ||||||||||| |||| ||||||| ||||    
T  1215150 ttagtgacgtggcagtgattaagtggggatagggacgaaattttaagtgattaaatttt 1215208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 30725903 - 30725821
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattag 229  Q
    |||||||  ||||||||||||| |||||||||||||||||| ||||||||||||    | |||||||||| ||| ||||||||    
T  30725903 ttagtgacatggcagtgattaaatggggagagggacgaaattttaaatgattaaacagtgcaagggtaaattggcaggattag 30725821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 33647107 - 33647025
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattag 229  Q
    ||||||| |||||||||||||| ||||||||| |||||||| |||||||||||| |  | |||||||||| ||| | ||||||    
T  33647107 ttagtgacgtggcagtgattaaatggggagagagacgaaattttaaatgattaaataatgcaagggtaaattggcaagattag 33647025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 363091 - 363136
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  363091 gtggcagtgattaagtggggagagggacgaaattttaaacgattaa 363136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 3059401 - 3059348
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  |||||||||||||||| ||||||||||||||| ||||||||||||    
T  3059401 ttagtgacatggcagtgattaagtgaggagagggacgaaattttaaatgattaa 3059348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 14196876 - 14196921
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||    
T  14196876 gtggcagtgattaagtggggagaggggcgaaattttaaatgattaa 14196921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 17734455 - 17734500
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||    
T  17734455 gtggcagtgattaagtggggagagggacaaaattttaaatgattaa 17734500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 26463321 - 26463255
Alignment:
Q  149 agtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaa 215  Q
    ||||| |||||||||||||| ||||  |||||||||||| ||||||||||||  ||| |||||||||    
T  26463321 agtgacgtggcagtgattaactgggatgagggacgaaattttaaatgattaaactttgcaagggtaa 26463255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 33648749 - 33648807
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttt 205  Q
    |||||||||||||||| |||||||| ||||||||| ||||| |||| ||||||| ||||    
T  33648749 ttagtgatgtggcagtaattaagtgaggagagggaagaaattttaagtgattaaatttt 33648807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 294
Target Start/End: Original strand, 738012 - 738084
Alignment:
Q  222 aggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagccaat 294  Q
    |||||||||||  ||||||| ||||| |||||||||||||| ||||||| | ||||  ||||| |||||||||    
T  738012 aggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagccaat 738084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 294
Target Start/End: Complemental strand, 8427297 - 8427197
Alignment:
Q  194 tgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagccaa 293  Q
    |||||||| ||| || ||| |||||||||||||||||||  | |  || ||||| |||||||||||||| ||||| | ||||||  ||||| ||||||||    
T  8427297 tgattaatatttgcaggggcaaaatgggaggattagtaacttgagagacgaaaattcaaatgacctatatttgcaaggatgaaagacatatttaagccaa 8427198  T
Q  294 t 294  Q
    |    
T  8427197 t 8427197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 15819774 - 15819874
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||| | ||| |||||||| | ||| |||||||||||  ||| ||| ||||| |||||||||||||| ||||||| | ||||  ||||| |||||    
T  15819774 aaatgattagtatttgcaagggtagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 15819873  T
Q  291 c 291  Q
    |    
T  15819874 c 15819874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 24210675 - 24210607
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaa 215  Q
    ||||||| ||||| ||||||| | ||||||||||| ||||| ||||||||||||  ||| |||||||||    
T  24210675 ttagtgacgtggcggtgattaggcggggagagggatgaaattttaaatgattaaactttgcaagggtaa 24210607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 3299843 - 3299942
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||||| ||| ||| || | | ||| |||||||||||  ||| ||| ||||| |||||||||||||| ||||||| | ||||| ||||| |||||    
T  3299843 aaatgattaatatttgcaatggcagattggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaatacatatttaagc 3299942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 3299819 - 3299749
Alignment:
Q  224 gattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagccaat 294  Q
    |||||||||  ||||||||||||| |||||||||||||  ||||||| | ||||| | ||| |||||||||    
T  3299819 gattagtaacttcatggatgaaaattcaaatgacctatgtttgcagggacgaaatacctatctaagccaat 3299749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 19296487 - 19296441
Alignment:
Q  224 gattagtaagctcatggatgaaaaatcaaatgacctataattgcagg 270  Q
    |||||||||  ||||||||||||| |||||||||||||| |||||||    
T  19296487 gattagtaacttcatggatgaaaattcaaatgacctatatttgcagg 19296441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 25486189 - 25486232
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||||||||  |||||||||||| ||||||||||||    
T  25486189 gtggcagtgattaagtggg--gagggacgaaattttaaatgattaa 25486232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 11392982 - 11392929
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||  ||||||||||||||| ||||||  |||||||| ||||||||||||    
T  11392982 ttagtgacatggcagtgattaagttgggagatagacgaaattttaaatgattaa 11392929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 5064435 - 5064335
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||||| ||| || ||| ||| |||||||||||||||  ||| ||| ||||| ||||||||| |||| || |||| | ||||  ||||| |||||    
T  5064435 aaatgattaatatttgcaggggcaaattgggaggattagtaacttcagggacgaaaattcaaatgacttatatttacagggacgaaagacatatttaagc 5064336  T
Q  291 c 291  Q
    |    
T  5064335 c 5064335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 9607631 - 9607679
Alignment:
Q  222 aggattagtaagctcatggatgaaaaatcaaatgacctataattgcagg 270  Q
    |||||||||||  ||||||| ||||| |||||||||||||| |||||||    
T  9607631 aggattagtaacttcatggacgaaaattcaaatgacctatatttgcagg 9607679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 693 - 593
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||||| ||| || ||| |||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||  ||||||||||||| |||||    
T  693 aaatgattaatatttgcaggggcaaaatgagaggattagtaagttcagggatgaaaaatcaaatgacctataattgcagtgatgaaatgcatatttaagc 594  T
Q  291 c 291  Q
    |    
T  593 c 593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 210 - 291
Target Start/End: Original strand, 14396 - 14477
Alignment:
Q  210 gggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||  ||||| |||||| ||||||    
T  14396 gggtaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattacaggggtgaaaagcatatttaagcc 14477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 291
Target Start/End: Complemental strand, 13211 - 13134
Alignment:
Q  214 aaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagcc 291  Q
    ||||||||||||||| ||| ||||  ||||||||||||||||  ||||| || |||| |||||| |||||| ||||||    
T  13211 aaaatgggaggattactaaactcagagatgaaaaatcaaatggtctatatttacagggatgaaaagcatatttaagcc 13134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 191 - 292
Target Start/End: Complemental strand, 73209 - 73108
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatgtaagc 290  Q
    ||||||||| |  ||||| ||| |||||||||||||||||||||||| ||||||||| ||||||| || |||||| |||| |||||| |||||| |||||    
T  73209 aaatgattagtaattacaggggcaaaatgggaggattagtaagctcagggatgaaaagtcaaatggcccataattacagggatgaaaagcatatttaagc 73110  T
Q  291 ca 292  Q
    ||    
T  73109 ca 73108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 37847 - 37929
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttacaagggtaaaatgggaggattag 229  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    |||||||||||| ||  ||||||||    
T  37847 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatacaagggtaaattgtcaggattag 37929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 37708 - 37654
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaat 201  Q
    |||||||||||||||||||||||| ||   | ||||||||| |||||||||||||    
T  37708 ttagtgatgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaat 37654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 69109 - 69056
Alignment:
Q  147 ttagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  69109 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 69056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 139808 - 139762
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaat 201  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  139808 gtggcagtgattaagtggggagagggacgaaattttaaatgattaat 139762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0559 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 1369 - 1324
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  1369 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 1324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 141855 - 141900
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  141855 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 141900  T

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Target: scaffold0007 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 1905 - 1860
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  1905 gtggcagtgattaagtggggagagggacgaaattttaaatgattaa 1860  T

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Target: scaffold0205 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 21230 - 21275
Alignment:
Q  155 gtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||    
T  21230 gtggcagtgattaagtggggagagggacggaattttaaatgattaa 21275  T

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Target: scaffold0295 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 2278 - 2234
Alignment:
Q  156 tggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||    
T  2278 tggcagtgattaagtggggagagggacaaaattttaaatgattaa 2234  T

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Target: scaffold0279 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 10953 - 10874
Alignment:
Q  191 aaatgattaatttttacaagggtaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattgcagg 270  Q
    ||||||||||| ||| ||| || ||||||| |||||||||||  || |||| ||||| |||||||||||||| |||||||    
T  10953 aaatgattaatatttgcaatggcaaaatggaaggattagtaacttcgtggacgaaaattcaaatgacctatatttgcagg 10874  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 239837 - 239888
Alignment:
Q  149 agtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaa 200  Q
    |||||||||||||| ||||||||||   ||||||||||| ||||||||||||    
T  239837 agtgatgtggcagtaattaagtgggtgtagggacgaaattttaaatgattaa 239888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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