View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21580_high_30 (Length: 369)
Name: NF21580_high_30
Description: NF21580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21580_high_30 |
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Alignment Details
Target: chr5 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 85 - 351
Target Start/End: Original strand, 25609529 - 25609794
Alignment:
| Q |
85 |
agaatagtggaaagaagaactatgcagatccggaaggcaacaatacttcttcagaagggggttcatacttatctgctgatgccacatagttcttcagtaa |
184 |
Q |
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| T |
25609529 |
agaatagtgcaaagaagaactatgcagatccggaaggcgacaatacttcttcagaagggggttcatacttatctgctgatgccacagagttcttcagtaa |
25609628 |
T |
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| Q |
185 |
accaatcaaggttaaaagnnnnnnnattagacttgttacaaaacgagaagctcccgttgtaagatcaatttctgttactaaactttggagaaaaacataa |
284 |
Q |
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| T |
25609629 |
accaatgaaggttaaaagtttttt-attagacttgttacaaaacgagaagctcccgttgtaagatcaatttctgttactaaactttggagaaaaacataa |
25609727 |
T |
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| Q |
285 |
ccagttgttctgcttgtcaattttgaaaacaaaccagactgcttgaaccgtcctggaatgggagaat |
351 |
Q |
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| T |
25609728 |
ccagttgttctgcttgtcaatttcgaaaacaaaccagactgcttgaaccgtcctggaatgggagaat |
25609794 |
T |
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