View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21580_high_35 (Length: 310)
Name: NF21580_high_35
Description: NF21580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21580_high_35 |
 | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0199 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 200; Significance: 1e-109; HSPs: 29)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 20 - 299
Target Start/End: Complemental strand, 4572425 - 4572146
Alignment:
| Q |
20 |
ctatgtaaacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagac |
119 |
Q |
| |
|
|||||||||||||||||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||| |||||| |||||||| ||||||||| |
|
|
| T |
4572425 |
ctatgtaaacactgaatacaatcacaaacggttgctcaagtcaagaggtcaaaatgcctttgatggtttcaccaattttaactttgagagtattccagat |
4572326 |
T |
|
| Q |
120 |
agtttatctccatcggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcaggaagaatttcctacaacctttccgcgatcttc |
219 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
4572325 |
ggtttatctccaacggatggcgatggcgatgttagtcaagacatttacgctctttgtaaatcaatcaggaagaattttctacaacctttccgcgaacttc |
4572226 |
T |
|
| Q |
220 |
ttgctagacttaatgactctgcaacatatggtcttgtccctccagttagttgcataatttctgatattaacatgtccttt |
299 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
4572225 |
ttgctagacttaatgactctgcaacatctggtcttgtccgtccagttagttgcatagtttctgatattagcatgtccttt |
4572146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 20 - 287
Target Start/End: Complemental strand, 4558584 - 4558317
Alignment:
| Q |
20 |
ctatgtaaacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagac |
119 |
Q |
| |
|
||||||||||||||||||||| || ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
4558584 |
ctatgtaaacactgaatacaaccacaaacggttgctcaagtcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccggat |
4558485 |
T |
|
| Q |
120 |
agtttatctccatcggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcaggaagaatttcctacaacctttccgcgatcttc |
219 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||| |||| |
|
|
| T |
4558484 |
ggtttaactccaacggatggtgatggcgatgttagtcaagacatttacgctctttgtaaatcaatcagaaagaacttcctacaacctttccgcgaacttc |
4558385 |
T |
|
| Q |
220 |
ttgctagacttaatgactctgcaacatatggtcttgtccctccagttagttgcataatttctgatatt |
287 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
4558384 |
ttgctagactaaatgactctgcaacatctggtcttgtccctccagttacttgcatagtttctgatatt |
4558317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 23 - 299
Target Start/End: Complemental strand, 4587088 - 4586812
Alignment:
| Q |
23 |
tgtaaacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagt |
122 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||| || ||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||| || |
|
|
| T |
4587088 |
tgtaaacactgaatacaatcacaaacggttgcttaagtcaagagctccaaatgcctttgatgatttaactgattttagctttgagactattccagatggt |
4586989 |
T |
|
| Q |
123 |
ttatctccatcggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcaggaagaatttcctacaacctttccgcgatcttcttg |
222 |
Q |
| |
|
||| ||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||| |
|
|
| T |
4586988 |
ttaactccaacggatggtgatggtgatgttagtcaagacatttacgctctttgtaaatcaatcagaaagaacttcctacaacctttccgcgaacttcttg |
4586889 |
T |
|
| Q |
223 |
ctagacttaatgactctgcaacatatggtcttgtccctccagttagttgcataatttctgatattaacatgtccttt |
299 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||||||||| | ||| ||| |||||||||||| |||||||||| |
|
|
| T |
4586888 |
ctagacttaatgactctgcaacatctggtcttatccctccagtcacttgtatagtttctgatattaccatgtccttt |
4586812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 27 - 294
Target Start/End: Complemental strand, 4581466 - 4581199
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttat |
126 |
Q |
| |
|
||||| ||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||| ||||||| |||||||||||||||||| ||||| |
|
|
| T |
4581466 |
aacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcgtttgatggtttcaccgattttacctttgagactattccagatggtttaa |
4581367 |
T |
|
| Q |
127 |
ctccatcggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcaggaagaatttcctacaacctttccgcgatcttcttgctag |
226 |
Q |
| |
|
|||| || || ||| | ||||||| |||||||||| | ||||| ||| |||||||||| ||||| |||||||||||||| | || ||||||||||| |
|
|
| T |
4581366 |
ctccgatagaaggcgatagtgatgttaatcaagacatatatgctctatgtgaatcaatcagaaagaacttcctacaacctttttgtgaacttcttgctag |
4581267 |
T |
|
| Q |
227 |
acttaatgactctgcaacatatggtcttgtccctccagttagttgcataatttctgatattaacatgt |
294 |
Q |
| |
|
||||||||||||||| || | |||||||||||||||||||| ||||||| ||||||||| || ||||| |
|
|
| T |
4581266 |
acttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgataatagcatgt |
4581199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 27 - 295
Target Start/End: Original strand, 4612394 - 4612668
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttat |
126 |
Q |
| |
|
||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||| ||||| || || |
|
|
| T |
4612394 |
aacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgttggtttcactgattttacctttgaggctataccagatggtctac |
4612493 |
T |
|
| Q |
127 |
ctccat-cg-----gatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcaggaagaatttcctacaacctttccgcgatcttct |
220 |
Q |
| |
|
|| || || ||||||||||| |||||||||||||||||| | ||||||||| |||||||||| ||||| |||||||||||||| ||||| ||| | |
|
|
| T |
4612494 |
cttcaaacgaaggcgatggtgatggtgatgttagtcaagacatatatgctctttgtgaatcaatcagaaagaacttcctacaaccttttcgcgaacttat |
4612593 |
T |
|
| Q |
221 |
tgctagacttaatgactctgcaacatatggtcttgtccctccagttagttgcataatttctgatattaacatgtc |
295 |
Q |
| |
|
| ||||||||||||||||||| || | ||||||||||||||| |||| ||||||||| |||||| || |||||| |
|
|
| T |
4612594 |
ttctagacttaatgactctgccacttctggtcttgtccctccggttacgtgcataattgctgataatagcatgtc |
4612668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 27 - 284
Target Start/End: Original strand, 4488873 - 4489130
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttat |
126 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4488873 |
aacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttaactgattttagctttgagactattccagatggtttaa |
4488972 |
T |
|
| Q |
127 |
ctccatcggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcaggaagaatttcctacaacctttccgcgatcttcttgctag |
226 |
Q |
| |
|
||||| | |||||||||||||||||||||||||| ||| |||||||||| |||||||| ||| ||||| | ||| || | | ||||||||| |
|
|
| T |
4488973 |
ctccaacagatggtgatggcgatgttagtcaagatttacgcgctctttgtctatcaatcatgaacaattttcaccaattctttggtgtatttcttgctaa |
4489072 |
T |
|
| Q |
227 |
acttaatgactctgcaacatatggtcttgtccctccagttagttgcataatttctgat |
284 |
Q |
| |
|
||||||||||||||| || ||||||| |||||||||||| |||| || |||||||| |
|
|
| T |
4489073 |
acttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgat |
4489130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 3173459 - 3173296
Alignment:
| Q |
23 |
tgtaaacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagt |
122 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||| ||||| || |
|
|
| T |
3173459 |
tgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttaactttgagactataccagatggt |
3173360 |
T |
|
| Q |
123 |
ttatctccatcggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatca |
186 |
Q |
| |
|
||| || || ||| |||||||| ||||||||||||||| ||| |||||||||| |||||||| |
|
|
| T |
3173359 |
ttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatca |
3173296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 27 - 186
Target Start/End: Complemental strand, 4575907 - 4575748
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttat |
126 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||| ||||| ||||| |
|
|
| T |
4575907 |
aacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcactgactttaactttgagactataccagatggtttaa |
4575808 |
T |
|
| Q |
127 |
ctccatcggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatca |
186 |
Q |
| |
|
||||| ||||||| |||| ||||| ||||||||| ||||| ||||| || ||||||||| |
|
|
| T |
4575807 |
ctccaaaggatggtaatggtgatgtaagtcaagacctacactctcttggtgaatcaatca |
4575748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 27 - 284
Target Start/End: Original strand, 4502969 - 4503226
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttat |
126 |
Q |
| |
|
||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| || ||||| ||||| |
|
|
| T |
4502969 |
aacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcaatgattttacctttgagaccataccagatggtttaa |
4503068 |
T |
|
| Q |
127 |
ctccatcggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcaggaagaatttcctacaacctttccgcgatcttcttgctag |
226 |
Q |
| |
|
|||| ||| |||||||| ||||||||||||||| ||| |||||| | | |||||||| ||||||||| | ||| || | || |||||| || |
|
|
| T |
4503069 |
ctccggtggaaggtgatggtgatgttagtcaagacttacgcgctctctatctatcaatcaagaagaattttcaccaattctttggtgaatttcttgttaa |
4503168 |
T |
|
| Q |
227 |
acttaatgactctgcaacatatggtcttgtccctccagttagttgcataatttctgat |
284 |
Q |
| |
|
||||||||||||||| || ||||||| |||||||||||| |||| || |||||||| |
|
|
| T |
4503169 |
acttaatgactctgccactgctggtcttatccctccagttacttgcttagtttctgat |
4503226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 4594462 - 4594250
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttat |
126 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| || || ||||| || || |
|
|
| T |
4594462 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgccttagatggtttccctggttttagctttgaaaccataccagatggtctaa |
4594363 |
T |
|
| Q |
127 |
ctccatcggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcaggaagaatttcctacaacctttccgcgatcttcttgctag |
226 |
Q |
| |
|
| ||| ||| |||||||| ||||||||||||||||||| | ||||| | |||| || || ||||||||||| |||| || | || |||||| | || |
|
|
| T |
4594362 |
caccaatggaaggtgatggtgatgttagtcaagacataccctctcttgctcaatctataagaaagaatttccttaaacccttttgtgaacttcttacaag |
4594263 |
T |
|
| Q |
227 |
acttaatgactct |
239 |
Q |
| |
|
||||||||||||| |
|
|
| T |
4594262 |
acttaatgactct |
4594250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 27 - 186
Target Start/End: Complemental strand, 4562113 - 4561955
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttat |
126 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||| |||| |||||||||||| ||||| ||||| |
|
|
| T |
4562113 |
aacactgaatacaatcacaaacgtttgct-aaatcaagaggtgaaaatgcctttgatggtttcactgactttaactttgagactataccagatggtttaa |
4562015 |
T |
|
| Q |
127 |
ctccatcggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatca |
186 |
Q |
| |
|
||||| |||||||||||| ||| ||||||||||| ||||| ||||| || ||||||||| |
|
|
| T |
4562014 |
ctccaaaggatggtgatggtgatattagtcaagacctacactctcttggtgaatcaatca |
4561955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 28 - 197
Target Start/End: Complemental strand, 4623758 - 4623589
Alignment:
| Q |
28 |
acactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttatc |
127 |
Q |
| |
|
|||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| || |||| ||||||||| |||||||| ||||| | |
|
|
| T |
4623758 |
acaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaggcctttgatggtttcacggactttaactttgagaccattccagatggtttaac |
4623659 |
T |
|
| Q |
128 |
tccatcggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcaggaagaatttc |
197 |
Q |
| |
|
||| ||| |||||||| ||||||||||||||||||| | |||||| | | ||||| |||||||||||| |
|
|
| T |
4623658 |
accaatggaaggtgatggtgatgttagtcaagacataccctctctttctgattcaataaggaagaatttc |
4623589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 4517792 - 4517656
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttat |
126 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
4517792 |
aacaccgaatacaatcacaaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaa |
4517693 |
T |
|
| Q |
127 |
ctccatcggatggtgatggcgatgttagtcaagacat |
163 |
Q |
| |
|
|||| || || ||||| ||||||||||||||||| |
|
|
| T |
4517692 |
ctccgatagaaggcgatggtgatgttagtcaagacat |
4517656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 284
Target Start/End: Complemental strand, 4507363 - 4507106
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttat |
126 |
Q |
| |
|
||||| ||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| | ||||| ||||| |
|
|
| T |
4507363 |
aacaccgaatacaatcacaaacgcttgctcaaatcaagaggtgaaaatgcctttgatggtttcactgattttaactttgagactctaccagatggtttaa |
4507264 |
T |
|
| Q |
127 |
ctccatcggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcaggaagaatttcctacaacctttccgcgatcttcttgctag |
226 |
Q |
| |
|
||||| |||||||||||| ||||||| || |||| | | || || || |||| || || ||||| || | | ||||| ||||| ||||| ||||| |
|
|
| T |
4507263 |
ctccaatggatggtgatggtgatgttaatccagacttgaaatctattcgtgaatcgattagaaagaaatttatttacccttttcgcgaacttctagctag |
4507164 |
T |
|
| Q |
227 |
acttaatgactctgcaacatatggtcttgtccctccagttagttgcataatttctgat |
284 |
Q |
| |
|
|||| |||||||||| | || ||||||||| ||||| |||| |||| || |||||||| |
|
|
| T |
4507163 |
acttgatgactctgcgaaatctggtcttgtgcctcctgttacttgcttagtttctgat |
4507106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 27 - 238
Target Start/End: Complemental strand, 4627602 - 4627391
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttat |
126 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||| || ||||| ||||| |
|
|
| T |
4627602 |
aacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggtttaa |
4627503 |
T |
|
| Q |
127 |
ctccatcggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcaggaagaatttcctacaacctttccgcgatcttcttgctag |
226 |
Q |
| |
|
| ||| || |||||||||||||||| ||||||||||| |||||| ||||||| || ||||| ||||| || || || | || |||||||||| |
|
|
| T |
4627502 |
caccactagaaggtgatggcgatgttactcaagacataccatctctttcccaatcaataagaaagaacttccttcagccctttggtgaacttcttgctaa |
4627403 |
T |
|
| Q |
227 |
acttaatgactc |
238 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
4627402 |
acttcatgactc |
4627391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 272
Target Start/End: Complemental strand, 4599615 - 4599370
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttat |
126 |
Q |
| |
|
||||| || |||||||| ||||| |||||||||||||||||||| ||| | | ||||||||||||||||| ||| |||||||||||||| ||||| |
|
|
| T |
4599615 |
aacaccgagtacaatcacaaacgcttgctcaaatcaagaggtcctaattctcgtaatggtttcactgatttttccttcgagactattccagatggtttaa |
4599516 |
T |
|
| Q |
127 |
ctccatcggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcaggaagaatttcctacaacctttccgcgatcttcttgctag |
226 |
Q |
| |
|
||||| ||||||||||| ||||||| || |||||| | |||| |||||||||||||| || || ||||| ||||| || ||||| ||||||||||| |
|
|
| T |
4599515 |
ctccaatagatggtgatggtgatgttacacaggacataaattctctctgtaaatcaatcagaaataacttcctccaaccatttcgcgaacttcttgctag |
4599416 |
T |
|
| Q |
227 |
acttaatgactctgcaacatatggtcttgtccctccagttagttgc |
272 |
Q |
| |
|
||| |||| ||| | || ||||||| |||||||||||| |||| |
|
|
| T |
4599415 |
actctatgagtcttctactgctggtcttatccctccagttacttgc |
4599370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 27 - 161
Target Start/End: Original strand, 4258852 - 4258986
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttat |
126 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||||||||| ||||||| |||||||||||| |||||||| |||||||||||||| ||| || | |
|
|
| T |
4258852 |
aacactgaatataatcacaaacgtttgctcaaatcaagaggtgaaaatgccgttgatggtttcattgattttacctttgagactattcaagatggtctga |
4258951 |
T |
|
| Q |
127 |
ctccatcggatggtgatggcgatgttagtcaagac |
161 |
Q |
| |
|
||||| ||| |||||||||||||||| ||||||| |
|
|
| T |
4258952 |
ctccagtggaaggtgatggcgatgttactcaagac |
4258986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 27 - 145
Target Start/End: Original strand, 4513655 - 4513773
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttat |
126 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| |||||| |||||||||||||||| || ||||| |
|
|
| T |
4513655 |
aacaccgaatacaatcacaaacgtttgctcaaatcaagaggtcctaatgcttttgatggtttcaccgattttcgctttgagactattcctgatggtttaa |
4513754 |
T |
|
| Q |
127 |
ctccatcggatggtgatgg |
145 |
Q |
| |
|
||||| |||||| ||||| |
|
|
| T |
4513755 |
ctccaatggatggcgatgg |
4513773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 39 - 160
Target Start/End: Complemental strand, 4569514 - 4569393
Alignment:
| Q |
39 |
aatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttatctccatcggatg |
138 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||| |||| | || | |
|
|
| T |
4569514 |
aatcacaaacatttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgacagaag |
4569415 |
T |
|
| Q |
139 |
gtgatggcgatgttagtcaaga |
160 |
Q |
| |
|
|| |||| ||| |||||||||| |
|
|
| T |
4569414 |
gttatggtgatattagtcaaga |
4569393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 4618753 - 4618620
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttat |
126 |
Q |
| |
|
||||| ||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||| || |||| |||||||| |||||||| ||||| |
|
|
| T |
4618753 |
aacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaggcttttgatggtttcacggactttaactttgagagcattccagatggtttaa |
4618654 |
T |
|
| Q |
127 |
ctccatcggatggtgatggcgatgttagtcaaga |
160 |
Q |
| |
|
| ||| ||| |||||||| |||||||||||||| |
|
|
| T |
4618653 |
caccaatggaaggtgatggtgatgttagtcaaga |
4618620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 272
Target Start/End: Original strand, 4298174 - 4298419
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttat |
126 |
Q |
| |
|
||||| ||||||||||| |||| ||||| ||||||| |||||||| || |||||||||||||| | ||||||||||||||||||||||| || | |
|
|
| T |
4298174 |
aacaccgaatacaatcacaaacacctgctcgaatcaaggggtccaaaagcttttgatggtttcaccaactttagctttgagactattccagatggtctga |
4298273 |
T |
|
| Q |
127 |
ctccatcggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcaggaagaatttcctacaacctttccgcgatcttcttgctag |
226 |
Q |
| |
|
||||| |||| |||||||| ||||||| ||||||||||| |||||| |||||||||| ||||| ||||| || || || | || |||||||||| |
|
|
| T |
4298274 |
ctccaacggaaggtgatggagatgttactcaagacataccatctctttcccaatcaatcagaaagaacttccttcagccctttggtgaacttcttgctaa |
4298373 |
T |
|
| Q |
227 |
acttaatgactctgcaacatatggtcttgtccctccagttagttgc |
272 |
Q |
| |
|
|||| ||| ||||| || ||||||||| || ||||||| |||| |
|
|
| T |
4298374 |
acttcgtgattctgccactgctggtcttgtaccaccagttacttgc |
4298419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 4482317 - 4482213
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttat |
126 |
Q |
| |
|
||||| ||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||||||||||||||| |||||| || || ||||| ||||| |
|
|
| T |
4482317 |
aacaccgaatacaatcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaa |
4482218 |
T |
|
| Q |
127 |
ctcca |
131 |
Q |
| |
|
||||| |
|
|
| T |
4482217 |
ctcca |
4482213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 4603562 - 4603483
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttga |
106 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||||||||| |||||||| || || |||||||||||||||||||| |
|
|
| T |
4603562 |
aacaccgaatacaatcacaaacgtttgctcaaatcaagaggtcctaatgccttagacggcttcactgattttagctttga |
4603483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 4565481 - 4565421
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtt |
87 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
4565481 |
aacactgaatacaatcataaacgattgctaaaatcaagaggtccaaatgccttagatggtt |
4565421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 118
Target Start/End: Original strand, 4265733 - 4265824
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccaga |
118 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||||||||||||| | |||||||||||| ||| |||| |||||||| || ||||| |
|
|
| T |
4265733 |
aacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaattctcttgatggtttcagtgactttaagtttgagaccataccaga |
4265824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 4255485 - 4255550
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcact |
92 |
Q |
| |
|
||||| ||||||||||| ||||| |||||| |||||||||||||||| ||||||||||||| |||| |
|
|
| T |
4255485 |
aacaccgaatacaatcacaaacgcttgctcgaatcaagaggtccaaaagcctttgatggttccact |
4255550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 284
Target Start/End: Complemental strand, 4471366 - 4471112
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttat |
126 |
Q |
| |
|
||||||||||||||||| ||| |||||||| ||||||||||| || | |||||||||||||||| |||| ||||||||| |||||| | |||| |
|
|
| T |
4471366 |
aacactgaatacaatcacaaagccttgctcaattcaagaggtcctgattctcttgatggtttcactgactttaactttgagaccattccaaatggtttta |
4471267 |
T |
|
| Q |
127 |
ctccatcggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcaggaagaatttcctacaacctttccgcgatcttcttgctag |
226 |
Q |
| |
|
|| || ||| | ||| ||| ||| ||||||||||||| | ||| | |||||||| || | | ||||| ||||| || | || |||||| |||| |
|
|
| T |
4471266 |
ctgcaatggaaag---tggtgatcttattcaagacatacactccttttttcgatcaatcatgacggacttccttcaaccctttggtgaacttcttactag |
4471170 |
T |
|
| Q |
227 |
acttaatgactctgcaacatatggtcttgtccctccagttagttgcataatttctgat |
284 |
Q |
| |
|
|||| ||| |||||| || ||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
4471169 |
acttgatgcctctgccactgctggtcttatccctccagttacttgcataatttctgat |
4471112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 116
Target Start/End: Complemental strand, 4462659 - 4462570
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcca |
116 |
Q |
| |
|
||||||||||||||||| || | |||||||| ||||||||||| ||| | | |||||||||||||| |||| ||||||||| |||||| |
|
|
| T |
4462659 |
aacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctctagatggtttcactgactttaactttgagaccattcca |
4462570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 69
Target Start/End: Original strand, 4483534 - 4483569
Alignment:
| Q |
34 |
aatacaatcataaacgtttgctcaaatcaagaggtc |
69 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| |
|
|
| T |
4483534 |
aatacaatcacaaacgtttgctcaaatcaagaggtc |
4483569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 104; Significance: 7e-52; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 93 - 295
Target Start/End: Original strand, 16685029 - 16685238
Alignment:
| Q |
93 |
gattttagctttgagactattccagacagtttatctccatcggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcaggaaga |
192 |
Q |
| |
|
|||||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
16685029 |
gattttagctttgagactattccatatggtttacctccaacggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcagaaaga |
16685128 |
T |
|
| Q |
193 |
atttcctacaacctttccgcgatcttcttgctagacttaatg-------actctgcaacatatggtcttgtccctccagttagttgcataatttctgata |
285 |
Q |
| |
|
| ||||| ||||| || ||||| | ||||||||||||| ||| || |||| ||| |||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
16685129 |
acttcctccaaccctttcgcgaacatcttgctagacttcatgaccgtgcacggtgcatcatctggtcttgtccctccagttacttgcatagtttctgata |
16685228 |
T |
|
| Q |
286 |
ttaacatgtc |
295 |
Q |
| |
|
||| |||||| |
|
|
| T |
16685229 |
ttagcatgtc |
16685238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 1675980 - 1675894
Alignment:
| Q |
20 |
ctatgtaaacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttga |
106 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
1675980 |
ctatgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttga |
1675894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 20862489 - 20862577
Alignment:
| Q |
30 |
actgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccaga |
118 |
Q |
| |
|
|||||||||||||| ||||| ||||| || |||| ||||||| ||||||||||||||||||| ||| |||||||||| ||||||| |
|
|
| T |
20862489 |
actgaatacaatcacaaacgcttgcttaagtcaatgggtccaataccctttgatggtttcactgactttcgctttgagaccgttccaga |
20862577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 27 - 265
Target Start/End: Complemental strand, 2276 - 2035
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttat |
126 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||| |||| ||||||||||| || ||||| |
|
|
| T |
2276 |
aacactgaatacaatcataaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttttgcttcgagactattcccgatggtttaa |
2177 |
T |
|
| Q |
127 |
ctccatcg---gatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcaggaagaatttcctacaacctttccgcgatcttcttgc |
223 |
Q |
| |
|
||||| | |||| |||||| |||||||||||||||||| | ||||||||||||||||||| || || ||||| || || ||||| |||||||| |
|
|
| T |
2176 |
ctccagtggaagatgatgatggtaatgttagtcaagacatactctctctttgtaaatcaatcagaaaaaacttccttcacttctttcgcgaacttcttgc |
2077 |
T |
|
| Q |
224 |
tagacttaatgactctgcaacatatggtcttgtccctccagt |
265 |
Q |
| |
|
||||||| | || ||||| | | ||||||| |||||||||| |
|
|
| T |
2076 |
tagacttgacgagtctgccaattctggtcttatccctccagt |
2035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 27 - 265
Target Start/End: Original strand, 2127 - 2368
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttat |
126 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||| |||| ||||||||||| || ||||| |
|
|
| T |
2127 |
aacactgaatacaatcataaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttttgcttcgagactattcccgatggtttaa |
2226 |
T |
|
| Q |
127 |
ctccatcg---gatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcaggaagaatttcctacaacctttccgcgatcttcttgc |
223 |
Q |
| |
|
||||| | |||| |||||| |||||||||||||||||| | ||||||||||||||||||| || || ||||| || || ||||| |||||||| |
|
|
| T |
2227 |
ctccagtggaagatgatgatggtaatgttagtcaagacatactctctctttgtaaatcaatcagaaaaaacttccttcacttctttcgcgaacttcttgc |
2326 |
T |
|
| Q |
224 |
tagacttaatgactctgcaacatatggtcttgtccctccagt |
265 |
Q |
| |
|
||||||| | || ||||| | | ||||||| |||||||||| |
|
|
| T |
2327 |
tagacttgacgagtctgccaattctggtcttatccctccagt |
2368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 1217 - 1131
Alignment:
| Q |
20 |
ctatgtaaacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttga |
106 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
1217 |
ctatgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttga |
1131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 1282882 - 1282806
Alignment:
| Q |
30 |
actgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttga |
106 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
1282882 |
actgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgccctagatggtttcactgattttagctttga |
1282806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 161
Target Start/End: Complemental strand, 3088191 - 3088063
Alignment:
| Q |
33 |
gaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttatctccat |
132 |
Q |
| |
|
||||||||||| || |||||||| |||||||||||| | ||| | |||||||||||||||||||| |||||||||||| | ||| || || ||||| |
|
|
| T |
3088191 |
gaatacaatcacaaccgtttgcttaaatcaagaggttctaattctcttgatggtttcactgattttgtctttgagactatccaagatggtctaactccaa |
3088092 |
T |
|
| Q |
133 |
cggatggtgatggcgatgttagtcaagac |
161 |
Q |
| |
|
||| ||| |||| ||||||||||||||| |
|
|
| T |
3088091 |
tggaaggtaatggtgatgttagtcaagac |
3088063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 173
Target Start/End: Complemental strand, 24104547 - 24104401
Alignment:
| Q |
27 |
aacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccagacagtttat |
126 |
Q |
| |
|
||||| ||||||||||| ||||| |||||| ||||||||| ||| ||| | |||||||||||| ||| |||| ||||||||| || ||||| || || |
|
|
| T |
24104547 |
aacaccgaatacaatcacaaacgcttgctcgaatcaagagatcctaattctcttgatggtttcaatgactttaactttgagaccataccagatggtctaa |
24104448 |
T |
|
| Q |
127 |
ctccatcggatggtgatggcgatgttagtcaagacatacacgctctt |
173 |
Q |
| |
|
||||| ||| || |||| ||||||| |||||||||| || ||||| |
|
|
| T |
24104447 |
ctccaatggaaggcaatggtgatgttactcaagacatataccctctt |
24104401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University