View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21580_high_57 (Length: 233)
Name: NF21580_high_57
Description: NF21580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21580_high_57 |
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Alignment Details
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 37631863 - 37632066
Alignment:
| Q |
1 |
gcatccattcacggtgaagtctgagctcctccttgttgaacacaatctgctccttcgaaactctgaaatacaccgcgaaccttccatcctccaattcctc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37631863 |
gcatccattcacggtgaagtctgagctcctccttgttgaacacgatctgctccttcgaaactctgaaatacaccgcgaaccttccatcctccaattcctc |
37631962 |
T |
|
| Q |
101 |
agtaatgtgaccctcccaccatccatcattgtgataggcatcaacttcatcgccgaatttgaacacccggttagcctccgtcggaagaactggtcggagc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37631963 |
agtaatgtgaccctcccaccatccatcattgtgataggcatcaacttcatcgccgaatttgaacacccggttagcctccgtcggaagaactggtcggagc |
37632062 |
T |
|
| Q |
201 |
tggt |
204 |
Q |
| |
|
|||| |
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|
| T |
37632063 |
tggt |
37632066 |
T |
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