View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21580_low_12 (Length: 595)

Name: NF21580_low_12
Description: NF21580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21580_low_12
NF21580_low_12
[»] chr6 (33 HSPs)
chr6 (1-573)||(5685228-5685796)
chr6 (115-247)||(14936452-14936584)
chr6 (108-243)||(26602319-26602454)
chr6 (112-246)||(11572141-11572275)
chr6 (112-245)||(6330115-6330248)
chr6 (112-242)||(2830335-2830465)
chr6 (112-242)||(8382969-8383099)
chr6 (112-244)||(13853591-13853723)
chr6 (112-243)||(8099530-8099661)
chr6 (109-243)||(9644693-9644827)
chr6 (109-243)||(9650710-9650844)
chr6 (120-249)||(6068931-6069062)
chr6 (112-244)||(35030999-35031131)
chr6 (112-243)||(33052793-33052924)
chr6 (112-242)||(8417793-8417923)
chr6 (141-226)||(4251338-4251423)
chr6 (112-245)||(6068566-6068699)
chr6 (175-245)||(3788100-3788170)
chr6 (148-250)||(28747126-28747228)
chr6 (198-243)||(8417879-8417924)
chr6 (112-227)||(6143554-6143669)
chr6 (101-156)||(13043747-13043802)
chr6 (112-162)||(2830415-2830465)
chr6 (112-162)||(6330195-6330245)
chr6 (112-162)||(8099610-8099660)
chr6 (112-162)||(8186447-8186497)
chr6 (112-162)||(8382969-8383019)
chr6 (112-162)||(9644776-9644826)
chr6 (112-162)||(9650793-9650843)
chr6 (112-162)||(11572145-11572195)
chr6 (112-162)||(13853593-13853643)
chr6 (112-162)||(26602403-26602453)
chr6 (127-231)||(14003004-14003108)
[»] chr2 (45 HSPs)
chr2 (126-243)||(23227271-23227388)
chr2 (126-243)||(41492895-41493012)
chr2 (112-245)||(44398686-44398819)
chr2 (112-243)||(3055558-3055689)
chr2 (112-243)||(37990012-37990143)
chr2 (112-243)||(41478638-41478769)
chr2 (112-242)||(13197710-13197840)
chr2 (112-242)||(15372226-15372356)
chr2 (112-242)||(15896842-15896972)
chr2 (112-245)||(44397547-44397680)
chr2 (112-244)||(13344484-13344616)
chr2 (112-242)||(12337937-12338067)
chr2 (110-243)||(6648518-6648651)
chr2 (110-242)||(16044317-16044449)
chr2 (112-244)||(38917520-38917652)
chr2 (172-231)||(13952545-13952604)
chr2 (172-231)||(14093752-14093811)
chr2 (112-243)||(37666609-37666740)
chr2 (118-243)||(9047754-9047879)
chr2 (118-243)||(16243782-16243907)
chr2 (146-247)||(13724097-13724198)
chr2 (132-225)||(14740487-14740580)
chr2 (111-230)||(12170411-12170530)
chr2 (108-162)||(12337933-12337987)
chr2 (122-208)||(20900674-20900760)
chr2 (112-162)||(41492896-41492946)
chr2 (174-227)||(3243129-3243182)
chr2 (198-235)||(23986864-23986901)
chr2 (117-250)||(30099174-30099307)
chr2 (110-162)||(15896922-15896974)
chr2 (112-195)||(4683979-4684062)
chr2 (111-162)||(15372306-15372357)
chr2 (112-162)||(3055638-3055688)
chr2 (112-162)||(6648519-6648569)
chr2 (112-162)||(9047755-9047805)
chr2 (112-162)||(13197710-13197760)
chr2 (112-170)||(13724102-13724160)
chr2 (112-162)||(37990013-37990063)
chr2 (112-162)||(38917522-38917572)
chr2 (112-162)||(41478639-41478689)
chr2 (112-162)||(44398766-44398816)
chr2 (209-242)||(12962821-12962854)
chr2 (183-236)||(20900670-20900723)
chr2 (111-192)||(31150652-31150733)
chr2 (126-166)||(30985768-30985808)
[»] chr7 (37 HSPs)
chr7 (127-243)||(28469496-28469612)
chr7 (112-243)||(38063912-38064043)
chr7 (112-243)||(1738446-1738577)
chr7 (112-243)||(7240749-7240880)
chr7 (112-246)||(9268756-9268890)
chr7 (112-242)||(22285699-22285829)
chr7 (112-242)||(36016196-36016326)
chr7 (112-242)||(46840860-46840990)
chr7 (109-242)||(31319399-31319532)
chr7 (112-243)||(7482225-7482356)
chr7 (112-243)||(36583395-36583526)
chr7 (112-242)||(23314139-23314269)
chr7 (118-242)||(94318-94442)
chr7 (112-244)||(1565727-1565859)
chr7 (110-236)||(25018370-25018496)
chr7 (186-246)||(7661150-7661210)
chr7 (112-243)||(4790248-4790379)
chr7 (112-243)||(28536750-28536881)
chr7 (112-242)||(38441460-38441590)
chr7 (112-249)||(7661069-7661206)
chr7 (186-242)||(7269479-7269535)
chr7 (112-242)||(9575409-9575539)
chr7 (112-162)||(31319399-31319449)
chr7 (112-169)||(24710742-24710799)
chr7 (110-162)||(23314137-23314189)
chr7 (110-162)||(46840940-46840992)
chr7 (141-232)||(33418405-33418496)
chr7 (112-162)||(1565729-1565779)
chr7 (112-162)||(1738447-1738497)
chr7 (112-162)||(7240829-7240879)
chr7 (112-162)||(7482305-7482355)
chr7 (112-162)||(9268836-9268886)
chr7 (112-162)||(22285779-22285829)
chr7 (115-245)||(31426784-31426914)
chr7 (209-250)||(13807354-13807395)
chr7 (126-233)||(2853680-2853787)
chr7 (135-227)||(39019843-39019934)
[»] chr4 (47 HSPs)
chr4 (112-246)||(3992976-3993110)
chr4 (112-243)||(48336263-48336394)
chr4 (112-242)||(20538686-20538816)
chr4 (112-245)||(3904680-3904813)
chr4 (99-242)||(47833598-47833741)
chr4 (112-242)||(3372121-3372251)
chr4 (121-243)||(33621805-33621927)
chr4 (112-242)||(46797725-46797855)
chr4 (111-245)||(53337369-53337503)
chr4 (110-242)||(6121893-6122025)
chr4 (112-242)||(43900549-43900679)
chr4 (111-244)||(24704369-24704502)
chr4 (143-227)||(50430433-50430517)
chr4 (112-243)||(41469765-41469896)
chr4 (112-243)||(47838616-47838747)
chr4 (109-243)||(5986873-5987007)
chr4 (112-242)||(42797732-42797862)
chr4 (112-242)||(51894582-51894712)
chr4 (127-216)||(31013036-31013125)
chr4 (112-241)||(40913190-40913319)
chr4 (109-244)||(52756672-52756807)
chr4 (112-227)||(7579310-7579425)
chr4 (198-244)||(24393906-24393952)
chr4 (112-210)||(44900080-44900178)
chr4 (126-243)||(3422075-3422191)
chr4 (109-162)||(51894579-51894632)
chr4 (126-230)||(23226015-23226119)
chr4 (112-231)||(24393831-24393950)
chr4 (146-242)||(41615676-41615772)
chr4 (188-243)||(17236864-17236919)
chr4 (112-243)||(17344213-17344344)
chr4 (112-162)||(3422140-3422190)
chr4 (112-162)||(6121893-6121943)
chr4 (112-162)||(7579390-7579440)
chr4 (108-162)||(20538682-20538736)
chr4 (116-226)||(21636139-21636249)
chr4 (112-162)||(46797805-46797855)
chr4 (112-162)||(47833691-47833741)
chr4 (143-193)||(51531502-51531552)
chr4 (112-162)||(52756755-52756805)
chr4 (113-162)||(40913190-40913239)
chr4 (186-242)||(1716301-1716357)
chr4 (112-168)||(3904683-3904739)
chr4 (112-168)||(5986950-5987006)
chr4 (112-168)||(17236862-17236918)
chr4 (112-212)||(33551201-33551301)
chr4 (143-195)||(41594685-41594737)
[»] scaffold0204 (1 HSPs)
scaffold0204 (112-243)||(23785-23916)
[»] chr8 (36 HSPs)
chr8 (112-243)||(32114474-32114605)
chr8 (112-242)||(3304278-3304408)
chr8 (112-245)||(2890159-2890292)
chr8 (109-242)||(6552652-6552785)
chr8 (112-244)||(54610-54742)
chr8 (112-243)||(7785777-7785908)
chr8 (112-243)||(8587170-8587301)
chr8 (112-251)||(32211354-32211493)
chr8 (110-243)||(39571202-39571335)
chr8 (112-243)||(7805698-7805829)
chr8 (112-243)||(12763653-12763784)
chr8 (112-243)||(43199353-43199484)
chr8 (112-243)||(44498186-44498317)
chr8 (112-246)||(25600996-25601130)
chr8 (112-242)||(31654613-31654743)
chr8 (113-243)||(30171483-30171613)
chr8 (112-242)||(33289261-33289391)
chr8 (111-232)||(12343150-12343271)
chr8 (112-243)||(7012171-7012302)
chr8 (112-227)||(15888367-15888482)
chr8 (148-228)||(12300509-12300589)
chr8 (164-239)||(4460525-4460600)
chr8 (112-227)||(13578857-13578972)
chr8 (110-162)||(31654693-31654745)
chr8 (117-172)||(28463616-28463671)
chr8 (112-162)||(54612-54662)
chr8 (112-162)||(2890162-2890212)
chr8 (112-162)||(6552735-6552785)
chr8 (112-162)||(7785778-7785828)
chr8 (112-162)||(15888352-15888402)
chr8 (112-162)||(33289261-33289311)
chr8 (112-162)||(39571203-39571253)
chr8 (115-228)||(17006914-17007027)
chr8 (115-228)||(17570220-17570333)
chr8 (164-243)||(27422242-27422321)
chr8 (180-244)||(33057662-33057726)
[»] chr5 (26 HSPs)
chr5 (109-243)||(9395347-9395481)
chr5 (112-243)||(13103024-13103155)
chr5 (112-243)||(36563537-36563668)
chr5 (112-243)||(41989406-41989537)
chr5 (112-242)||(37148955-37149085)
chr5 (111-244)||(11795167-11795300)
chr5 (112-243)||(13033051-13033182)
chr5 (112-242)||(23359942-23360072)
chr5 (112-244)||(17025624-17025756)
chr5 (107-242)||(20848069-20848203)
chr5 (164-242)||(6126876-6126954)
chr5 (112-212)||(582989-583089)
chr5 (141-245)||(21575975-21576079)
chr5 (112-243)||(26350349-26350480)
chr5 (108-162)||(37148951-37149005)
chr5 (112-244)||(37641953-37642086)
chr5 (112-208)||(11574114-11574210)
chr5 (112-239)||(4443960-4444087)
chr5 (112-162)||(6126904-6126954)
chr5 (112-162)||(9395430-9395480)
chr5 (112-162)||(13103104-13103154)
chr5 (112-162)||(17025704-17025754)
chr5 (112-162)||(36563538-36563588)
chr5 (112-162)||(41989407-41989457)
chr5 (109-162)||(583069-583121)
chr5 (141-225)||(2629561-2629645)
[»] chr3 (45 HSPs)
chr3 (112-242)||(34080030-34080160)
chr3 (112-242)||(34988075-34988205)
chr3 (112-244)||(37508921-37509053)
chr3 (112-244)||(49823379-49823511)
chr3 (112-243)||(10297979-10298110)
chr3 (112-243)||(17653712-17653843)
chr3 (112-242)||(19557052-19557182)
chr3 (112-246)||(51406673-51406807)
chr3 (112-245)||(22721931-22722064)
chr3 (112-244)||(46208030-46208162)
chr3 (127-227)||(53275310-53275410)
chr3 (112-242)||(9213516-9213646)
chr3 (112-242)||(48340397-48340527)
chr3 (118-243)||(40690995-40691120)
chr3 (118-242)||(2787832-2787956)
chr3 (112-244)||(8437425-8437557)
chr3 (112-243)||(4238594-4238725)
chr3 (112-243)||(8817385-8817516)
chr3 (112-227)||(33942947-33943062)
chr3 (112-243)||(36095679-36095810)
chr3 (112-239)||(42507358-42507485)
chr3 (112-227)||(44785411-44785526)
chr3 (112-242)||(21295326-21295456)
chr3 (112-242)||(38964392-38964522)
chr3 (112-242)||(42170346-42170476)
chr3 (112-245)||(9111491-9111624)
chr3 (188-250)||(53275287-53275349)
chr3 (110-215)||(2131699-2131804)
chr3 (110-195)||(35513471-35513556)
chr3 (110-162)||(48340477-48340529)
chr3 (115-242)||(6013336-6013463)
chr3 (112-162)||(10298059-10298109)
chr3 (112-162)||(19557052-19557102)
chr3 (112-162)||(34080030-34080080)
chr3 (112-162)||(40690996-40691046)
chr3 (108-162)||(42507351-42507405)
chr3 (112-162)||(44785396-44785446)
chr3 (112-162)||(49823381-49823431)
chr3 (137-242)||(2131697-2131802)
chr3 (141-246)||(5237536-5237640)
chr3 (109-170)||(5323279-5323340)
chr3 (109-158)||(6013333-6013382)
chr3 (174-243)||(9027141-9027210)
chr3 (210-242)||(21663003-21663035)
chr3 (143-195)||(43323091-43323143)
[»] scaffold0464 (1 HSPs)
scaffold0464 (112-243)||(6130-6261)
[»] chr1 (43 HSPs)
chr1 (112-243)||(11897054-11897185)
chr1 (109-244)||(47216697-47216832)
chr1 (112-242)||(27159358-27159488)
chr1 (112-242)||(31842795-31842925)
chr1 (112-242)||(39401966-39402096)
chr1 (112-242)||(44668093-44668223)
chr1 (118-243)||(14984843-14984968)
chr1 (112-239)||(9981647-9981774)
chr1 (112-242)||(11795933-11796063)
chr1 (112-242)||(26471065-26471195)
chr1 (110-243)||(1050886-1051019)
chr1 (112-243)||(17556752-17556884)
chr1 (104-243)||(12483627-12483766)
chr1 (112-243)||(34042696-34042827)
chr1 (120-242)||(47777481-47777603)
chr1 (112-211)||(16448139-16448238)
chr1 (110-232)||(44955216-44955338)
chr1 (112-245)||(25694319-25694452)
chr1 (112-244)||(37552141-37552273)
chr1 (112-212)||(23278031-23278131)
chr1 (127-243)||(47588336-47588452)
chr1 (112-243)||(47969694-47969826)
chr1 (112-162)||(11897134-11897184)
chr1 (108-170)||(11989853-11989915)
chr1 (112-162)||(34042776-34042826)
chr1 (109-162)||(39401963-39402016)
chr1 (112-168)||(12483628-12483684)
chr1 (110-162)||(31842793-31842845)
chr1 (110-162)||(47777479-47777531)
chr1 (111-162)||(11796013-11796064)
chr1 (126-232)||(12043618-12043723)
chr1 (112-162)||(14984917-14984967)
chr1 (186-244)||(16448182-16448240)
chr1 (112-162)||(17556833-17556883)
chr1 (112-162)||(25694399-25694449)
chr1 (112-162)||(27159358-27159408)
chr1 (198-232)||(40676799-40676833)
chr1 (112-162)||(44668093-44668143)
chr1 (112-162)||(47216699-47216749)
chr1 (209-250)||(38040267-38040308)
chr1 (198-243)||(47588423-47588468)
chr1 (155-243)||(19610779-19610867)
chr1 (110-162)||(26471063-26471115)
[»] scaffold0009 (2 HSPs)
scaffold0009 (112-248)||(49505-49641)
scaffold0009 (111-168)||(49579-49636)
[»] scaffold0482 (1 HSPs)
scaffold0482 (112-243)||(12860-12991)
[»] scaffold0171 (1 HSPs)
scaffold0171 (115-225)||(12370-12480)
[»] scaffold1707 (1 HSPs)
scaffold1707 (119-227)||(1342-1450)
[»] scaffold0650 (1 HSPs)
scaffold0650 (112-207)||(20-114)
[»] scaffold0017 (1 HSPs)
scaffold0017 (150-242)||(30008-30099)


Alignment Details
Target: chr6 (Bit Score: 455; Significance: 0; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 1 - 573
Target Start/End: Original strand, 5685228 - 5685796
Alignment:
Q  1 tcaatttttcctgctcccttacttccttttcctccactattcccaccacctcttagccctggctcaccccctacttcttcaagtaatttctctccttgat 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5685228 tcaatttttcctgctcccttacttccttttcctccactgttcccaccacctcttagccctggctcaccccctacttcttcaagtaatttctctccttgat 5685327  T
Q  101 tattaacttattactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattt 200  Q
    ||||||| ||||| ||| || |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  5685328 tattaacatattattccttctggttctattaataaaaaacatttgggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattt 5685427  T
Q  201 tgttgacccaaatgtttcttataaataagaccagagggagtatataatattatagttgtaaattgcgatctgcagctgcaacttaacagttttagaggtc 300  Q
    || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5685428 tgctgacccaaatgtttcttataaataagaccagatggagtatataatattatagttgtaaattgcaatctgcagctgcaacttaacagttttagaggtc 5685527  T
Q  301 tccacaacagcattggaatgacaattgcagctacattttcctgcaaggctgcaatataaaggtttacaatgtaactgcgagtgcaatttgaaactatgat 400  Q
    |||||||| ||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||    
T  5685528 tccacaacggcattggaatgacaattgcggctaca--ttcctgcaaggctgcaatataaaggtttacagtataactgtgagtgcaatttgaaactatgat 5685625  T
Q  401 tatgatatatagtatagttctctaaatatggggatgattatgttacatatgtagtgacttaagcnnnnnnnntgttgatacattattgctatgtttgtaa 500  Q
    ||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||        ||||||||||||||||||||||||||||    
T  5685626 tatg--atatagtatagttctctaaatatggggatgattatgtcacatatgtagtgacttaagcaaaaaaaatgttgatacattattgctatgtttgtaa 5685723  T
Q  501 ttagtaatagatacaagaatattgttatcttagagattttctagtaattttttagtgtgtaatttctaccctt 573  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5685724 ttagtaatagatacaagaatattgttatcttagagattttctagtaatttttgagtgtgtaatttctaccctt 5685796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 115 - 247
Target Start/End: Complemental strand, 14936584 - 14936452
Alignment:
Q  115 tccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatg 214  Q
    |||||| ||| ||||| |||| ||| |||||||||||||| ||||||| |||||||| |||||| ||||| ||||||||||  ||||||||||| |||||    
T  14936584 tccctctggtcctatttataagagatatttgggtcaacaatagttgatgtatttggaacaaattcttaactagatacatcaccttttgttgacctaaatg 14936485  T
Q  215 tttcttataaataagaccagagggagtatataa 247  Q
    |||||| || ||| |||||||||||||||||||    
T  14936484 tttcttctatataggaccagagggagtatataa 14936452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 108 - 243
Target Start/End: Original strand, 26602319 - 26602454
Alignment:
Q  108 ttattactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgac 207  Q
    |||||||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||    
T  26602319 ttattactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgac 26602418  T
Q  208 ccaaatgtttcttataaataagaccagagggagtat 243  Q
    |||||  | ||||||||||| |||| ||||||||||    
T  26602419 ccaaaattctcttataaataggaccggagggagtat 26602454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 112 - 246
Target Start/End: Complemental strand, 11572275 - 11572141
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  11572275 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 11572176  T
Q  212 atgtttcttataaataagaccagagggagtatata 246  Q
    |  | ||||||||||| |||| |||||||||||||    
T  11572175 aattctcttataaataggaccggagggagtatata 11572141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 112 - 245
Target Start/End: Original strand, 6330115 - 6330248
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  6330115 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 6330214  T
Q  212 atgtttcttataaataagaccagagggagtatat 245  Q
    |  | ||||||||||| |||| ||||||||||||    
T  6330215 aattctcttataaataggaccggagggagtatat 6330248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 2830335 - 2830465
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  2830335 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 2830434  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  2830435 aattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 8383099 - 8382969
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  8383099 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 8383000  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  8382999 aattctcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 112 - 244
Target Start/End: Complemental strand, 13853723 - 13853591
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| ||| |||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  13853723 tactaccttcggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 13853624  T
Q  212 atgtttcttataaataagaccagagggagtata 244  Q
    |  | ||||||||||| |||| |||||||||||    
T  13853623 aattctcttataaataggaccggagggagtata 13853591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 8099530 - 8099661
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || ||||||||   |||| ||||| ||||||||||  ||||||||||||||    
T  8099530 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaa 8099629  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| ||||||||||    
T  8099630 aattctcttataaataggaccggagggagtat 8099661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 9644693 - 9644827
Alignment:
Q  109 tattactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacc 208  Q
    ||||||| |||||||| ||||| |||| ||| |||| |||||||| || |  || |||||||||  |||| ||||| ||||||||||  |||||||||||    
T  9644693 tattactacctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 9644792  T
Q  209 caaatgtttcttataaataagaccagagggagtat 243  Q
    ||||  | ||||||||||| |||| ||||||||||    
T  9644793 caaaattctcttataaataggaccggagggagtat 9644827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 9650710 - 9650844
Alignment:
Q  109 tattactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacc 208  Q
    ||||||| |||||||| ||||| |||| ||| |||| |||||||| || |  || |||||||||  |||| ||||| ||||||||||  |||||||||||    
T  9650710 tattactacctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 9650809  T
Q  209 caaatgtttcttataaataagaccagagggagtat 243  Q
    ||||  | ||||||||||| |||| ||||||||||    
T  9650810 caaaattctcttataaataggaccggagggagtat 9650844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 249
Target Start/End: Complemental strand, 6069062 - 6068931
Alignment:
Q  120 ccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttct 219  Q
    ||||| ||||| |||||||| |||| |||||||||||||| || ||||||| | ||||| |||||  ||||| |||| ||||||||||| |||| |||||    
T  6069062 ccggtcctatttataaaagatatttaggtcaacaaaagttaatgtatttggtctaaatttttaactcgatacttcatcttttgttgacctaaatatttct 6068963  T
Q  220 --tataaataagaccagagggagtatataata 249  Q
      |||||||| || |||| ||||||| |||||    
T  6068962 tatataaataggatcagatggagtatttaata 6068931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 244
Target Start/End: Complemental strand, 35031131 - 35030999
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| | | |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  35031131 tactacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaa 35031032  T
Q  212 atgtttcttataaataagaccagagggagtata 244  Q
    |  | ||||||||||| |||| |||| ||||||    
T  35031031 aattctcttataaataggaccggaggaagtata 35030999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 33052924 - 33052793
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  |||| |||||||||    
T  33052924 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaa 33052825  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| || |||||||    
T  33052824 aattctcttataaataggaccggatggagtat 33052793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 8417923 - 8417793
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    ||||||||| |||  |||| |||| ||| |||| |||||||||||||  || ||||||||   |||| ||||| ||||||||||  ||||||||||||||    
T  8417923 tactccctctggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaa 8417824  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| ||||  ||||||||    
T  8417823 aattctcttataaataggaccgaagggagta 8417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 4251338 - 4251423
Alignment:
Q  141 atttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaat 226  Q
    ||||| ||||||||||||| |  || |||  ||||||| ||||| |||||||||| ||||| |||||| |||||||||||||||||    
T  4251338 atttgagtcaacaaaagttaacgtacttgatccaaattcttaactagatacatcacattttattgacctaaatgtttcttataaat 4251423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 112 - 245
Target Start/End: Original strand, 6068566 - 6068699
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| | | |||| |||||| ||||||  || ||||||||   |||| ||||| ||||||||||  |||||||||| |||    
T  6068566 tactacctccggtcctatttataagaaaaatttaggtcaataaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgactcaa 6068665  T
Q  212 atgtttcttataaataagaccagagggagtatat 245  Q
    |  | ||||||||||| |||| ||||||||||||    
T  6068666 aattctcttataaataggaccggagggagtatat 6068699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 245
Target Start/End: Original strand, 3788100 - 3788170
Alignment:
Q  175 aattattaacaagatacatcatattttgttgacccaaatgtttcttataaataagaccagagggagtatat 245  Q
    |||| ||||| | ||||||||  ||||||||||| |||| | |||||||||||||||| ||||||||||||    
T  3788100 aattgttaactaaatacatcaacttttgttgacctaaatttatcttataaataagaccggagggagtatat 3788170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 250
Target Start/End: Complemental strand, 28747228 - 28747126
Alignment:
Q  148 tcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaataagaccagagggagtatataa 247  Q
    |||||||||||  || |||||||||  |||| ||||  ||||||||||  |||||||||||||||  | ||||||||||| |||   |||||||||||||    
T  28747228 tcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgacccaaaattctcttataaataggactgaagggagtatataa 28747129  T
Q  248 tat 250  Q
    |||    
T  28747128 tat 28747126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 8417879 - 8417924
Alignment:
Q  198 ttttgttgacccaaatgtttcttataaataagaccagagggagtat 243  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||    
T  8417879 ttttgttgacctaaatttctcttataaataagaccagagggagtat 8417924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 6143554 - 6143669
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||| | ||||| |||| ||| |||| |||||||||||||  || ||||||||   |||| ||||| ||||||||||  |||||||| |||||    
T  6143554 tactacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgtcccaa 6143653  T
Q  212 atgtttcttataaata 227  Q
    |  | |||||||||||    
T  6143654 aattctcttataaata 6143669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 13043747 - 13043802
Alignment:
Q  101 tattaacttattactccctccggttctattaataaaagacatttgggtcaacaaaa 156  Q
    |||||| |||||||| |||||||||||||| |||| ||| |||| |||||||||||    
T  13043747 tattaatttattactacctccggttctatttataagagaaatttaggtcaacaaaa 13043802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 2830465 - 2830415
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  2830465 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 2830415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 6330245 - 6330195
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  6330245 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 6330195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 8099660 - 8099610
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  8099660 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 8099610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 8186497 - 8186447
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||| ||||| ||||| |||||||| |||||| |||||||||||||||    
T  8186497 tactccccccggtcctatttataaaagaaatttggatcaacaaaagttgat 8186447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 8382969 - 8383019
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  8382969 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 8383019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 9644826 - 9644776
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  9644826 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 9644776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 9650843 - 9650793
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  9650843 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 9650793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 11572145 - 11572195
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  11572145 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 11572195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 13853593 - 13853643
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  13853593 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 13853643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 26602453 - 26602403
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  26602453 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 26602403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 14003108 - 14003004
Alignment:
Q  127 tattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaat 226  Q
    |||| |||| ||||||||| ||||||||||||| || ||| ||  ||| ||| ||||| ||||| ||||| | | ||| ||  ||||||||| |||||||    
T  14003108 tatttataagagacatttgagtcaacaaaagttaatctatatgatccacattcttaaccagatatatcatctatggttaacttaaatgtttcgtataaat 14003009  T
Q  227 aagac 231  Q
    |||||    
T  14003008 aagac 14003004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 7e-29; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 126 - 243
Target Start/End: Complemental strand, 23227388 - 23227271
Alignment:
Q  126 ctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaa 225  Q
    ||||| |||| |||||||| ||||||||||||||||| ||||||| ||||||| |||   |||||||||| |||||||||||| |||| |||||||||||    
T  23227388 ctatttataagagacattttggtcaacaaaagttgatgtatttggtccaaattcttagtcagatacatcacattttgttgacctaaatatttcttataaa 23227289  T
Q  226 taagaccagagggagtat 243  Q
    || |||||||||||||||    
T  23227288 tatgaccagagggagtat 23227271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 126 - 243
Target Start/End: Complemental strand, 41493012 - 41492895
Alignment:
Q  126 ctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaa 225  Q
    ||||| |||||||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  |||||||||||||||| | |||||||||    
T  41493012 ctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggacagaatttttaactagatacatcaacttttgttgacccaaatttctcttataaa 41492913  T
Q  226 taagaccagagggagtat 243  Q
    || |||| ||||||||||    
T  41492912 taggaccggagggagtat 41492895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 112 - 245
Target Start/End: Original strand, 44398686 - 44398819
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  44398686 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 44398785  T
Q  212 atgtttcttataaataagaccagagggagtatat 245  Q
    |  | ||||||||||| |||| ||||||||||||    
T  44398786 aattctcttataaataggaccggagggagtatat 44398819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 3055558 - 3055689
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  3055558 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 3055657  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| ||||||||||    
T  3055658 aattctcttataaataggaccggagggagtat 3055689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 37990143 - 37990012
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  37990143 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 37990044  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| ||||||||||    
T  37990043 aattctcttataaataggaccggagggagtat 37990012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 41478769 - 41478638
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  41478769 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 41478670  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| ||||||||||    
T  41478669 aattctcttataaataggaccggagggagtat 41478638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 13197840 - 13197710
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  13197840 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 13197741  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  13197740 aattctcttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 15372226 - 15372356
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||||||||| || ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  15372226 tactccctccagtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacgagatacatcaacttttgttgacccaa 15372325  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  15372326 aattctcttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 15896842 - 15896972
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  15896842 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 15896941  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  15896942 aattctcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 112 - 245
Target Start/End: Original strand, 44397547 - 44397680
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  44397547 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 44397646  T
Q  212 atgtttcttataaataagaccagagggagtatat 245  Q
    |  | ||||||||||| |||| | ||||||||||    
T  44397647 aattctcttataaataggaccggggggagtatat 44397680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 112 - 244
Target Start/End: Original strand, 13344484 - 13344616
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||||||||| |||| ||| |||| ||||||||||| |  || |||||||||  |||| ||||| ||||||||||  ||||||||| ||||    
T  13344484 tactacctccggttctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgatccaa 13344583  T
Q  212 atgtttcttataaataagaccagagggagtata 244  Q
    |  | ||||||||||| |||| |||||||||||    
T  13344584 aattctcttataaataggaccggagggagtata 13344616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 12338067 - 12337937
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||||||||| |||| | | |||| ||||||||||| |  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  12338067 tactacctccggttctatttataagaaaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 12337968  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  12337967 aattctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 110 - 243
Target Start/End: Complemental strand, 6648651 - 6648518
Alignment:
Q  110 attactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgaccc 209  Q
    |||||| |||||||| ||||| |||| ||| |||| |||||||| || |  || |||||||||  |||| ||||| ||||||||||  ||||||||||||    
T  6648651 attactacctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 6648552  T
Q  210 aaatgtttcttataaataagaccagagggagtat 243  Q
    |||  | ||||||||||| |||| ||||||||||    
T  6648551 aaaattctcttataaataggaccggagggagtat 6648518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 242
Target Start/End: Complemental strand, 16044449 - 16044317
Alignment:
Q  110 attactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgaccc 209  Q
    |||||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||| ||  |||| ||||| ||||||||||  ||| ||||||||    
T  16044449 attactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaactttagttgaccc 16044350  T
Q  210 aaatgtttcttataaataagaccagagggagta 242  Q
    |||  | ||||||||||| |||| |||||||||    
T  16044349 aaaattctcttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 244
Target Start/End: Complemental strand, 38917652 - 38917520
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| | | |||| |||||| ||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  38917652 tactacctccggtcctatttataagataaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 38917553  T
Q  212 atgtttcttataaataagaccagagggagtata 244  Q
    |  | ||||||||||| |||| |||||||||||    
T  38917552 aattctcttataaataggaccggagggagtata 38917520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 13952604 - 13952545
Alignment:
Q  172 ccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaataagac 231  Q
    ||||||| ||||||||||| ||||||||||||| ||| ||||||||||||||||||||||    
T  13952604 ccaaattcttaacaagataaatcatattttgttaacctaaatgtttcttataaataagac 13952545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 14093811 - 14093752
Alignment:
Q  172 ccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaataagac 231  Q
    ||||||| ||||||||||| ||||||||||||| ||| ||||||||||||||||||||||    
T  14093811 ccaaattcttaacaagataaatcatattttgttaacctaaatgtttcttataaataagac 14093752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 37666740 - 37666609
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||| ||  |||| ||||| ||||||||||  ||| ||||||||||    
T  37666740 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaactttagttgacccaa 37666641  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| ||||||||||    
T  37666640 aattctcttataaataggaccggagggagtat 37666609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 118 - 243
Target Start/End: Complemental strand, 9047879 - 9047754
Alignment:
Q  118 ctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgttt 217  Q
    |||||||  |||| |||| ||| |||| |||||| ||||||  || |||||||||  |||| ||||| ||||||||||  |||||||||||||||  | |    
T  9047879 ctccggtcatatttataagagaaatttaggtcaaaaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 9047780  T
Q  218 cttataaataagaccagagggagtat 243  Q
    |||||||||| |||| ||||||||||    
T  9047779 cttataaataggaccggagggagtat 9047754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 118 - 243
Target Start/End: Complemental strand, 16243907 - 16243782
Alignment:
Q  118 ctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgttt 217  Q
    ||||||| ||||| |||| | | |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  |||||||||||||||  | |    
T  16243907 ctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 16243808  T
Q  218 cttataaataagaccagagggagtat 243  Q
    |||||||||| |||| || |||||||    
T  16243807 cttataaataggaccggatggagtat 16243782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 13724198 - 13724097
Alignment:
Q  146 ggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaataagaccagagggagtatat 245  Q
    ||||||||||||||||| ||| ||| |||| || ||||| | ||||||||  ||||||||||| | |||| |||| |||||| |||| ||||||||| ||    
T  13724198 ggtcaacaaaagttgatgtatctggtccaattttttaaccaaatacatcaacttttgttgacctagatgtctcttgtaaataggaccggagggagtacat 13724099  T
Q  246 aa 247  Q
    ||    
T  13724098 aa 13724097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 14740487 - 14740580
Alignment:
Q  132 ataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaa 225  Q
    |||| ||| ||||| ||||||||||| | || ||||| | ||||||| ||||| |||||||||| |||| ||||||  ||||||||||||||||    
T  14740487 ataagagatatttgtgtcaacaaaaggtaatgtatttcgtccaaatttttaaccagatacatcacatttagttgacttaaatgtttcttataaa 14740580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 12170530 - 12170411
Alignment:
Q  111 ttactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgaccca 210  Q
    |||||||||||| | ||||| | || ||| | || |||||| ||||||| || |||||||||  |||| ||||| | ||||||||  |||||||||||||    
T  12170530 ttactccctccgatcctatttacaagagaaaattaggtcaataaaagttaatgtatttggactgaatttttaactaaatacatcaacttttgttgaccca 12170431  T
Q  211 aatgtttcttataaataaga 230  Q
    | | | ||||||||||||||    
T  12170430 agtttctcttataaataaga 12170411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 12337933 - 12337987
Alignment:
Q  108 ttattactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  12337933 ttattactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 12337987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 208
Target Start/End: Original strand, 20900674 - 20900760
Alignment:
Q  122 ggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacc 208  Q
    ||||||||| |||| |||||||||||||| ||||||||||| ||| | | ||||||| | ||| |||||| |||  |||||||||||    
T  20900674 ggttctatttataagagacatttgggtcagcaaaagttgatgtatcttgtccaaattttgaaccagatacgtcaatttttgttgacc 20900760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 41492896 - 41492946
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| ||| ||||||||||||||||||||||    
T  41492896 tactccctccggtcctatttataagagaaatttgggtcaacaaaagttgat 41492946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 3243182 - 3243129
Alignment:
Q  174 aaattattaacaagatacatcatattttgttgacccaaatgtttcttataaata 227  Q
    ||||| ||||| |||||||||| |||| ||||||| ||||||||||||||||||    
T  3243182 aaattcttaacgagatacatcacatttagttgacctaaatgtttcttataaata 3243129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 23986864 - 23986901
Alignment:
Q  198 ttttgttgacccaaatgtttcttataaataagaccaga 235  Q
    |||||||||| |||||||||||||||||||||||||||    
T  23986864 ttttgttgactcaaatgtttcttataaataagaccaga 23986901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 117 - 250
Target Start/End: Complemental strand, 30099307 - 30099174
Alignment:
Q  117 cctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtt 216  Q
    |||||| | ||||| |||| ||| |||| ||||||||||| |  || ||||||||   |||| ||||  ||||||||||  |||||||||||||||  |     
T  30099307 cctccgatcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggattgaatttttaattagatacatcaacttttgttgacccaaaattc 30099208  T
Q  217 tcttataaataagaccagagggagtatataatat 250  Q
    ||| ||||||| |||| ||||||||||| |||||    
T  30099207 tctaataaataggaccggagggagtataaaatat 30099174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 15896974 - 15896922
Alignment:
Q  110 attactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  15896974 attactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 15896922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 195
Target Start/End: Complemental strand, 4684062 - 4683979
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatca 195  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||    
T  4684062 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 4683979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 15372357 - 15372306
Alignment:
Q  111 ttactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    |||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  15372357 ttactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 15372306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 3055688 - 3055638
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  3055688 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 3055638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 6648519 - 6648569
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  6648519 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 6648569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 9047755 - 9047805
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  9047755 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 9047805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 13197710 - 13197760
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  13197710 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 13197760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 170
Target Start/End: Original strand, 13724102 - 13724160
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttgg 170  Q
    ||||||||||||| ||||| | || |||||| | ||||||||||||||||| |||||||    
T  13724102 tactccctccggtcctatttacaagagacatctaggtcaacaaaagttgatgtatttgg 13724160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 37990013 - 37990063
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  37990013 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 37990063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 38917522 - 38917572
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  38917522 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 38917572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 41478639 - 41478689
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  41478639 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 41478689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 44398816 - 44398766
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  44398816 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 44398766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 242
Target Start/End: Original strand, 12962821 - 12962854
Alignment:
Q  209 caaatgtttcttataaataagaccagagggagta 242  Q
    ||||||||||||||||||| ||||||||||||||    
T  12962821 caaatgtttcttataaataggaccagagggagta 12962854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 20900723 - 20900670
Alignment:
Q  183 acaagatacatcatattttgttgacccaaatgtttcttataaataagaccagag 236  Q
    |||||||||||||  ||||| |||||||||||| |||||||||||  |||||||    
T  20900723 acaagatacatcaacttttgctgacccaaatgtctcttataaatagaaccagag 20900670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 192
Target Start/End: Original strand, 31150652 - 31150733
Alignment:
Q  111 ttactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagataca 192  Q
    |||||| ||||| | ||||| |||| ||| | ||| ||||||||||||| || ||||||||| ||||| ||||| |||||||    
T  31150652 ttactctctccgatcctatttataagagaaagttgcgtcaacaaaagtttatgtatttggactaaatttttaactagataca 31150733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 30985808 - 30985768
Alignment:
Q  126 ctattaataaaagacatttgggtcaacaaaagttgatttat 166  Q
    ||||| |||| |||||||| |||||||||||||||||||||    
T  30985808 ctatttataacagacattttggtcaacaaaagttgatttat 30985768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 7e-26; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 28469496 - 28469612
Alignment:
Q  127 tattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaat 226  Q
    |||| ||||||||||||| |||||||||||||| || |||  || ||||||||||||  |||||||||| ||||| |||||| ||||| |||||||||||    
T  28469496 tatttataaaagacatttaggtcaacaaaagttaatgtatcaggtccaaattattaatcagatacatcacattttattgacctaaatgattcttataaat 28469595  T
Q  227 aagaccagagggagtat 243  Q
    | |||||||||||||||    
T  28469596 atgaccagagggagtat 28469612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 38064043 - 38063912
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  38064043 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 38063944  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||||||||||||||    
T  38063943 aattctcttataaataggaccagagggagtat 38063912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 1738577 - 1738446
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  1738577 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 1738478  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| ||||||||||    
T  1738477 aattctcttataaataggaccggagggagtat 1738446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 7240749 - 7240880
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  7240749 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 7240848  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| ||||||||||    
T  7240849 aattctcttataaataggaccggagggagtat 7240880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 112 - 246
Target Start/End: Original strand, 9268756 - 9268890
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||| ||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  9268756 tactacctctggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 9268855  T
Q  212 atgtttcttataaataagaccagagggagtatata 246  Q
    |  | ||||||||||| |||| |||||||||||||    
T  9268856 aattctcttataaataggaccggagggagtatata 9268890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 22285699 - 22285829
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    ||||||||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||  ||||||||||  ||||||||||||||    
T  22285699 tactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaa 22285798  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  22285799 aattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 36016326 - 36016196
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    ||||||||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||  ||||||||||  ||||||||||||||    
T  36016326 tactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaa 36016227  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| ||||||| ||||||    
T  36016226 aattctcttataaataggaccagatggagta 36016196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 46840860 - 46840990
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  46840860 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 46840959  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  46840960 aattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 242
Target Start/End: Complemental strand, 31319532 - 31319399
Alignment:
Q  109 tattactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacc 208  Q
    ||||||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  |||||||||||    
T  31319532 tattactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 31319433  T
Q  209 caaatgtttcttataaataagaccagagggagta 242  Q
    ||||  | |||||||||||  ||| |||||||||    
T  31319432 caaaattctcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 7482225 - 7482356
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||| ||  |||| ||||| ||||||||||  ||||||||||||||    
T  7482225 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaa 7482324  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| ||||||||||    
T  7482325 aattctcttataaataggaccggagggagtat 7482356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 36583395 - 36583526
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  36583395 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggacttaatttttaactagatacatcaacttttgttgacccaa 36583494  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| || | ||||||||||    
T  36583495 aattctcttataaataggatcggagggagtat 36583526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 23314269 - 23314139
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||| ||||  ||||||||||||||    
T  23314269 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatatatcaacttttgttgacccaa 23314170  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  23314169 aattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 118 - 242
Target Start/End: Complemental strand, 94442 - 94318
Alignment:
Q  118 ctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgttt 217  Q
    ||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  |||||||||||||||  | |    
T  94442 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggacagaatttttaactagatacatcaacttttgttgacccaaaattct 94343  T
Q  218 cttataaataagaccagagggagta 242  Q
    |||||||||| || | |||||||||    
T  94342 cttataaataggatcggagggagta 94318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 244
Target Start/End: Complemental strand, 1565859 - 1565727
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  1565859 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 1565760  T
Q  212 atgtttcttataaataagaccagagggagtata 244  Q
    |  | |||||||||||  |||  ||||||||||    
T  1565759 aattctcttataaatagaaccgaagggagtata 1565727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 110 - 236
Target Start/End: Complemental strand, 25018496 - 25018370
Alignment:
Q  110 attactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgaccc 209  Q
    |||||||||||  ||||||||||||| | | |||| |  |||||||||||||| ||||||| | | ||| ||||| |||||||| | ||||| |||||      
T  25018496 attactccctcatgttctattaataagaaatatttagaccaacaaaagttgatgtatttggtcaacattcttaaccagatacataacattttattgacat 25018397  T
Q  210 aaatgtttcttataaataagaccagag 236  Q
    |||||||||||| ||||| ||||||||    
T  25018396 aaatgtttcttacaaataggaccagag 25018370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 7661150 - 7661210
Alignment:
Q  186 agatacatcatattttgttgacccaaatgtttcttataaataagaccagagggagtatata 246  Q
    ||||||||||  |||||||||||||||||| || |||||||| ||||||||||||||||||    
T  7661150 agatacatcaacttttgttgacccaaatgtctcatataaataggaccagagggagtatata 7661210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 4790248 - 4790379
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| | | |||| ||||||||||| |  || ||||||||| ||||| ||||| ||||||||||  |||| |||||||||    
T  4790248 tactacctccggtcctatttataagaaaaatttaggtcaacaaaaatgaatgtatttggactaaatttttaactagatacatcaacttttattgacccaa 4790347  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| |||| |||||    
T  4790348 aattctcttataaataggaccggaggaagtat 4790379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 28536881 - 28536750
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || ||||||||   |||| ||||| ||||||||||  |||| |||| ||||    
T  28536881 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggaatgaatttttaactagatacatcaacttttattgatccaa 28536782  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| ||||||||||    
T  28536781 aattctcttataaataggaccggagggagtat 28536750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 38441460 - 38441590
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| ||||  ||||||||||||  || |||||| ||  |||| ||||| ||||||||||  ||||||||||||||    
T  38441460 tactacctccggtcctatttataagagaaatttatgtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaa 38441559  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||| ||||    
T  38441560 aattctcttataaataggaccggaggaagta 38441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 112 - 249
Target Start/End: Complemental strand, 7661206 - 7661069
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    ||||||||| ||| ||||| |||  |||||||||||||||||||||||||| ||| | | |||| || || || || |||||||  |||| |||||  ||    
T  7661206 tactccctctggtcctatttatatgagacatttgggtcaacaaaagttgatgtatctagtccaatttttttaccagctacatcaacttttattgacataa 7661107  T
Q  212 atgtttcttataaataagaccagagggagtatataata 249  Q
    || | ||||||||||| || |  |||||||||||||||    
T  7661106 atttctcttataaataggatcgaagggagtatataata 7661069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 7269479 - 7269535
Alignment:
Q  186 agatacatcatattttgttgacccaaatgtttcttataaataagaccagagggagta 242  Q
    ||||||||||  |||||||||||||| | |||||||||||||||||| |||||||||    
T  7269479 agatacatcaatttttgttgacccaactttttcttataaataagaccggagggagta 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 9575409 - 9575539
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    ||||||||| ||| |||||  ||| ||| | ||||||||||||||||| |  ||||| |||  |||| ||||| ||||||||||  ||||||||||| ||    
T  9575409 tactccctctggtcctatttgtaagagaaagttgggtcaacaaaagttaacgtatttagactgaatttttaactagatacatcaagttttgttgaccaaa 9575508  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
     | | ||||||||||| ||||  ||||||||    
T  9575509 ctttctcttataaataggaccgaagggagta 9575539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 31319399 - 31319449
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||||||||| |||| |||  |||||||||||||||||||||    
T  31319399 tactccctccggttctatttataagagaattttgggtcaacaaaagttgat 31319449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 24710799 - 24710742
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttg 169  Q
    ||||||||||||| || || ||||||||||  ||||||||||||||||||| ||||||    
T  24710799 tactccctccggtcctttttataaaagacaactgggtcaacaaaagttgatgtatttg 24710742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 23314137 - 23314189
Alignment:
Q  110 attactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  23314137 attactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 23314189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 46840992 - 46840940
Alignment:
Q  110 attactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  46840992 attactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 46840940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 33418405 - 33418496
Alignment:
Q  141 atttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaataagacc 232  Q
    |||| |||||||||||||  || |||||||||  |||| ||||  ||||||||||  |||||||||||||||  | ||||||||||| ||||    
T  33418405 atttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggacc 33418496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 1565729 - 1565779
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    |||||||| |||||||||| |||| |||  |||||||||||||||||||||    
T  1565729 tactcccttcggttctatttataagagaattttgggtcaacaaaagttgat 1565779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 1738447 - 1738497
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  1738447 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 1738497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 7240879 - 7240829
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  7240879 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 7240829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 7482355 - 7482305
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  7482355 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 7482305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 9268886 - 9268836
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  9268886 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 9268836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 22285829 - 22285779
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  22285829 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 22285779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 245
Target Start/End: Original strand, 31426784 - 31426914
Alignment:
Q  115 tccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatg 214  Q
    ||||| |||||||||| |||||| | ||||| ||||| |||| ||| | ||| ||  ||| ||| | ||||||||  ||||  |||| |||| ||||||     
T  31426784 tccctacggttctatttataaaaaatatttgcgtcaataaaaattgttgtatctgatccacattttgaacaagattaatcaacttttattgatccaaata 31426883  T
Q  215 tttcttataaataagaccagagggagtatat 245  Q
    | ||||||||||||||  |||||||||||||    
T  31426884 tctcttataaataagaatagagggagtatat 31426914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 13807354 - 13807395
Alignment:
Q  209 caaatgtttcttataaataagaccagagggagtatataatat 250  Q
    |||||||||||||||||||  ||| |||||||||||||||||    
T  13807354 caaatgtttcttataaatagaaccggagggagtatataatat 13807395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 126 - 233
Target Start/End: Complemental strand, 2853787 - 2853680
Alignment:
Q  126 ctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcata-ttttgttgacccaaatgtttcttataa 224  Q
    ||||| |||||||| | || ||||||||||| ||||| ||| |||  ||| || ||||| |||||||| ||| ||||||||| |||||| | ||||| ||    
T  2853787 ctatttataaaagatagtttggtcaacaaaaattgatgtatatggttcaattttttaactagatacat-atacttttgttgatccaaatttctcttacaa 2853689  T
Q  225 ataagacca 233  Q
    |||||||||    
T  2853688 ataagacca 2853680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 39019934 - 39019843
Alignment:
Q  135 aaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaata 227  Q
    |||||||| | ||||||||||||||||| | ||||  |||| || | ||| ||||||||||  ||||||||| |||||||  |||||||||||    
T  39019934 aaagacatataggtcaacaaaagttgatat-tttgatccaagttttgaactagatacatcaatttttgttgatccaaatgcctcttataaata 39019843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 1e-24; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 112 - 246
Target Start/End: Original strand, 3992976 - 3993110
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  3992976 tactacctccggtcctatttataagagaaatttcggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 3993075  T
Q  212 atgtttcttataaataagaccagagggagtatata 246  Q
    |  | |||||||||||||||| |||||||||||||    
T  3993076 aattctcttataaataagaccggagggagtatata 3993110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 48336263 - 48336394
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  48336263 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 48336362  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  ||||||||||||| |||| ||||||||||    
T  48336363 aattttcttataaataggaccggagggagtat 48336394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 20538816 - 20538686
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| |||||||||| |||||||||||||||    
T  20538816 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaaattttgttgacccaa 20538717  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  20538716 aattctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 112 - 245
Target Start/End: Complemental strand, 3904813 - 3904680
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||||||| |||| |||||||||||||  || |||||||||  |||| ||||| | ||||||||  ||||||||||||||    
T  3904813 tactacctccggtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaatttttgttgacccaa 3904714  T
Q  212 atgtttcttataaataagaccagagggagtatat 245  Q
    |  | ||||||||||| |||| ||||||||||||    
T  3904713 aattctcttataaataggaccggagggagtatat 3904680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 99 - 242
Target Start/End: Original strand, 47833598 - 47833741
Alignment:
Q  99 attattaacttattactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatat 198  Q
    ||||||||  || |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  |    
T  47833598 attattaaaataatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaact 47833697  T
Q  199 tttgttgacccaaatgtttcttataaataagaccagagggagta 242  Q
    ||||||||||||||  | ||||||||||| |||| |||||||||    
T  47833698 tttgttgacccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 3372121 - 3372251
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  3372121 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 3372220  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  3372221 aattatcttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 121 - 243
Target Start/End: Original strand, 33621805 - 33621927
Alignment:
Q  121 cggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttctt 220  Q
    |||||||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  |||||||||||||||  | ||||    
T  33621805 cggttctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattatctt 33621904  T
Q  221 ataaataagaccagagggagtat 243  Q
    ||||||| |||| ||||||||||    
T  33621905 ataaataggaccggagggagtat 33621927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 46797725 - 46797855
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||||||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||| ||||  ||||||||||||||    
T  46797725 tactacctccggttctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatatatcaacttttgttgacccaa 46797824  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  46797825 aattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 111 - 245
Target Start/End: Original strand, 53337369 - 53337503
Alignment:
Q  111 ttactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgaccca 210  Q
    ||||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  |||| ||||||||    
T  53337369 ttactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgaccca 53337468  T
Q  211 aatgtttcttataaataagaccagagggagtatat 245  Q
    ||  | ||||||||||| |||| ||||||||||||    
T  53337469 aaattctcttataaataggaccggagggagtatat 53337503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 110 - 242
Target Start/End: Complemental strand, 6122025 - 6121893
Alignment:
Q  110 attactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgaccc 209  Q
    |||||| |||||||| ||||| |||| ||| |||| | |||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||    
T  6122025 attactacctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 6121926  T
Q  210 aaatgtttcttataaataagaccagagggagta 242  Q
    |||  | ||||||||||| |||| |||||||||    
T  6121925 aaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 43900549 - 43900679
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    ||||||||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||| ||||||    
T  43900549 tactccctccggtcctatttataagagaaatttaggtcaacaaaagtaaatgtatttggactgaatttttaactagatacatcaacttttgttaacccaa 43900648  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||| ||||    
T  43900649 aattctcttataaataggaccggaggaagta 43900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 24704369 - 24704502
Alignment:
Q  111 ttactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgaccca 210  Q
    ||||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| |||||||| |  |||||||||||||    
T  24704369 ttactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacattaacttttgttgaccca 24704468  T
Q  211 aatgtttcttataaataagaccagagggagtata 244  Q
    ||  | ||||||||||| || | |||||||||||    
T  24704469 aaattctcttataaataggatcggagggagtata 24704502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 50430517 - 50430433
Alignment:
Q  143 ttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaata 227  Q
    |||||||||||||||||||| ||||||||   |||| ||||| ||||||||||  |||||||||||||||| | |||||||||||    
T  50430517 ttgggtcaacaaaagttgatgtatttggattgaatttttaaccagatacatcaatttttgttgacccaaatatatcttataaata 50430433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 41469896 - 41469765
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| ||| |||| ||||| |||||||| |||| |||||||||||||  || |||||||||  |||| ||||  ||||||||||  ||||||||||| ||    
T  41469896 tacttccttcggtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgaccaaa 41469797  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| ||||||||||    
T  41469796 aattctcttataaataggaccggagggagtat 41469765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 47838747 - 47838616
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||| | ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||| ||    
T  47838747 tactacctccgatcctatttataagagaaatttcggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaa 47838648  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| ||||||||||    
T  47838647 aattctcttataaataggaccggagggagtat 47838616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 5986873 - 5987007
Alignment:
Q  109 tattactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacc 208  Q
    ||||||| |||||| ||||||| |||| ||| || | |||||||||||||  || |||||||||  |||| ||||| | ||||||||  |||||||||||    
T  5986873 tattactacctccgattctatttataagagaaatataggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 5986972  T
Q  209 caaatgtttcttataaataagaccagagggagtat 243  Q
    ||||  | ||||||||||| |||| ||| ||||||    
T  5986973 caaaattctcttataaataggaccggagagagtat 5987007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 42797732 - 42797862
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||  |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||| ||    
T  42797732 tactacctccggtcctatatataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacctaa 42797831  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  42797832 aattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 51894712 - 51894582
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| | | |||| |||||||||||||  || | |||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  51894712 tactacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtttttggactgaatttttaaccagatacatcaacttttgttgacccaa 51894613  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  51894612 aattctcttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 31013036 - 31013125
Alignment:
Q  127 tattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtt 216  Q
    |||| ||||||||||||| | ||||||||||| ||| |||||||   ||||| ||||| ||||||||||| ||||||||||| |||||||    
T  31013036 tatttataaaagacatttagatcaacaaaagtagatgtatttggtttaaattcttaactagatacatcatcttttgttgacctaaatgtt 31013125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 241
Target Start/End: Complemental strand, 40913319 - 40913190
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    ||||||||||||| ||||| |||| ||| |||| | |||||||||||  || |||||||||  |||| |||||  |||| ||||  ||||||||| ||||    
T  40913319 tactccctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactggatatatcaacttttgttgatccaa 40913220  T
Q  212 atgtttcttataaataagaccagagggagt 241  Q
    || | ||||||||||| |||| ||||||||    
T  40913219 atttctcttataaataggaccggagggagt 40913190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 244
Target Start/End: Original strand, 52756672 - 52756807
Alignment:
Q  109 tattactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacc 208  Q
    |||||||  ||||||| ||||| |||| ||| |||| |||||||| ||||  || |||||||||  |||| ||||| ||||||||||  |||||||||||    
T  52756672 tattactatctccggtcctatttataagagaaatttaggtcaacataagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 52756771  T
Q  209 caaatgtttcttataaataagaccagagggagtata 244  Q
    ||||  | | ||||||||| ||||  ||||||||||    
T  52756772 caaaattcttttataaataggaccgaagggagtata 52756807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 7579310 - 7579425
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| ||| |||||||||  || ||||||||   |||| ||||| ||||||||||  ||||||||||||||    
T  7579310 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaa 7579409  T
Q  212 atgtttcttataaata 227  Q
    |  | |||||||||||    
T  7579410 aattctcttataaata 7579425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 24393906 - 24393952
Alignment:
Q  198 ttttgttgacccaaatgtttcttataaataagaccagagggagtata 244  Q
    ||||||||||||||||||||||||| |||| |||| |||||||||||    
T  24393906 ttttgttgacccaaatgtttcttatgaatatgaccggagggagtata 24393952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 210
Target Start/End: Original strand, 44900080 - 44900178
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgaccca 210  Q
    ||||||||||||| ||||| |||| ||| |||  ||||||||||||||||| ||| ||| |||| |  ||||| |||||| |||  |||||||||||||    
T  44900080 tactccctccggtcctatttataagagatattctggtcaacaaaagttgatatatctggtccaattgtttaaccagatacgtcaacttttgttgaccca 44900178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 126 - 243
Target Start/End: Original strand, 3422075 - 3422191
Alignment:
Q  126 ctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaa 225  Q
    ||||| |||| ||| |||| ||||||||||| |  || |||||| ||  |||| ||||| ||||||||||  |||||||||||||||  | |||||||||    
T  3422075 ctatttataagagaaatttaggtcaacaaaa-tgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaa 3422173  T
Q  226 taagaccagagggagtat 243  Q
    || |||| ||||||||||    
T  3422174 taggaccggagggagtat 3422191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 51894579 - 51894632
Alignment:
Q  109 tattactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    |||||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  51894579 tattactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 51894632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 23226119 - 23226015
Alignment:
Q  126 ctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaa 225  Q
    ||||| ||| |||| ||||||||||||||||||| || ||| ||  ||||||| | |||  |||||||||  ||||||||| | |||| | |||||||||    
T  23226119 ctatttatagaagatatttgggtcaacaaaagtttatgtatctgatccaaattttgaactggatacatcaatttttgttgatctaaatatctcttataaa 23226020  T
Q  226 taaga 230  Q
    |||||    
T  23226019 taaga 23226015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 24393950 - 24393831
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaac-aaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgaccca 210  Q
    |||||||||||||  |||| |||| | |||||||||||||| |||| ||||| |||||||  |||| | ||||| |||||| |||  ||||||| ||| |    
T  24393950 tactccctccggtcatattcataagaaacatttgggtcaacaaaaaattgatgtatttggttcaaa-tcttaacgagatacgtcactttttgtttaccta 24393852  T
Q  211 aatgtttcttataaataagac 231  Q
    ||| ||||||||||| |||||    
T  24393851 aatatttcttataaacaagac 24393831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 242
Target Start/End: Complemental strand, 41615772 - 41615676
Alignment:
Q  146 ggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaataagaccagagggagta 242  Q
    |||||||||||||| || |||||||||  |||| ||||| | ||||||||  ||||||||| |||| | | ||||||||||| |||| || ||||||    
T  41615772 ggtcaacaaaagttaatgtatttggacttaatttttaactaaatacatcaacttttgttgatccaattttctcttataaataggaccggatggagta 41615676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 17236864 - 17236919
Alignment:
Q  188 atacatcatattttgttgacccaaatgtttcttataaataagaccagagggagtat 243  Q
    ||||||||  |||||||||||||||| ||||||||||||| |||| ||| ||||||    
T  17236864 atacatcaacttttgttgacccaaatttttcttataaataggaccggagagagtat 17236919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 17344213 - 17344344
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    ||||| ||||||||||||| |||| ||| | ||   ||||||||||||||| ||| || ||  |||| ||||   |||||||||  ||||||||| ||||    
T  17344213 tactcgctccggttctatttataagagaaagttaaatcaacaaaagttgatgtatctgaactgaatttttaatcggatacatcaacttttgttgatccaa 17344312  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    || | ||||||||||||||   ||||||||||    
T  17344313 atttctcttataaataagattggagggagtat 17344344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 3422190 - 3422140
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  3422190 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 3422140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 6121893 - 6121943
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  6121893 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 6121943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 7579440 - 7579390
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    |||| |||||||||||||| |||| |||  |||||||||||||||||||||    
T  7579440 tacttcctccggttctatttataagagaattttgggtcaacaaaagttgat 7579390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 20538682 - 20538736
Alignment:
Q  108 ttattactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||||||| ||||| |||| |||  ||||||||||||||| |||||    
T  20538682 ttattactccctccggtcctatttataagagaattttgggtcaacaaaatttgat 20538736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 21636249 - 21636139
Alignment:
Q  116 ccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgt 215  Q
    ||||||||||||||| |||| |||||||||  ||||||||| || || ||||||   ||| || |||||  |||||||||  |||| | ||| ||||| |    
T  21636249 ccctccggttctatttataagagacatttgaatcaacaaaaattaatgtatttgcttcaattttttaacctgatacatcaacttttatcgactcaaattt 21636150  T
Q  216 ttcttataaat 226  Q
    |||||||||||    
T  21636149 ttcttataaat 21636139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 46797855 - 46797805
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  46797855 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 46797805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 47833741 - 47833691
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  47833741 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 47833691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 51531502 - 51531552
Alignment:
Q  143 ttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacat 193  Q
    |||||||||||||| ||||| ||||||| ||||||| | ||||||||||||    
T  51531502 ttgggtcaacaaaaattgatgtatttggtccaaattttgaacaagatacat 51531552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 52756805 - 52756755
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    |||||||| |||| ||||| ||||||||  |||||||||||||||||||||    
T  52756805 tactcccttcggtcctatttataaaagaattttgggtcaacaaaagttgat 52756755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 40913190 - 40913239
Alignment:
Q  113 actccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    |||||||||||| ||||| |||| ||| |||||| |||||||||||||||    
T  40913190 actccctccggtcctatttataagagaaatttggatcaacaaaagttgat 40913239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 1716357 - 1716301
Alignment:
Q  186 agatacatcatattttgttgacccaaatgtttcttataaataagaccagagggagta 242  Q
    ||||||||||  ||||||||||| || | | |||||||||||||||| |||||||||    
T  1716357 agatacatcaacttttgttgaccaaattatctcttataaataagaccggagggagta 1716301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 3904683 - 3904739
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttattt 168  Q
    ||||||||||||| ||||| |||| |||  ||||||||||||||| ||||| |||||    
T  3904683 tactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtattt 3904739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 112 - 168
Target Start/End: Complemental strand, 5987006 - 5986950
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttattt 168  Q
    ||||| ||||||| ||||| |||| |||  ||||||||||||||||||||| |||||    
T  5987006 tactctctccggtcctatttataagagaattttgggtcaacaaaagttgatgtattt 5986950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 112 - 168
Target Start/End: Complemental strand, 17236918 - 17236862
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttattt 168  Q
    ||||| ||||||| ||||| |||| | | |||||||||||||||||||||| |||||    
T  17236918 tactctctccggtcctatttataagaaaaatttgggtcaacaaaagttgatgtattt 17236862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 112 - 212
Target Start/End: Original strand, 33551201 - 33551301
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || ||||| |||  |||| ||||| ||||||||||  ||||||  ||||||    
T  33551201 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtattttgactgaatttttaactagatacatcaacttttgtaaacccaa 33551300  T
Q  212 a 212  Q
    |    
T  33551301 a 33551301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 41594685 - 41594737
Alignment:
Q  143 ttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatca 195  Q
    |||||||||||||||||||| ||| ||| ||||||| | ||| ||||||||||    
T  41594685 ttgggtcaacaaaagttgatgtatatggtccaaattttgaaccagatacatca 41594737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 23785 - 23916
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  23785 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 23884  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  ||||||||||||| |||| ||||||||||    
T  23885 aattttcttataaataggaccggagggagtat 23916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 6e-23; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 32114605 - 32114474
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  32114605 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaa 32114506  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  ||||||||||||| |||| ||||||||||    
T  32114505 aattttcttataaataggaccggagggagtat 32114474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 3304408 - 3304278
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  3304408 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 3304309  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  ||||||||||||| |||| |||||||||    
T  3304308 aattttcttataaataggaccggagggagta 3304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 112 - 245
Target Start/End: Complemental strand, 2890292 - 2890159
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  2890292 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 2890193  T
Q  212 atgtttcttataaataagaccagagggagtatat 245  Q
    |  | ||||||||||| |||| ||||||||||||    
T  2890192 aattctcttataaataggaccggagggagtatat 2890159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 109 - 242
Target Start/End: Original strand, 6552652 - 6552785
Alignment:
Q  109 tattactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacc 208  Q
    ||||||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  |||||||||||    
T  6552652 tattactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 6552751  T
Q  209 caaatgtttcttataaataagaccagagggagta 242  Q
    ||||  | ||||||||||| |||| |||||||||    
T  6552752 caaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 112 - 244
Target Start/End: Complemental strand, 54742 - 54610
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  54742 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 54643  T
Q  212 atgtttcttataaataagaccagagggagtata 244  Q
    |  | ||||||||||| |||| |||||||||||    
T  54642 aattctcttataaataggaccggagggagtata 54610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 7785908 - 7785777
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  7785908 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 7785809  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| ||||||||||    
T  7785808 aattctcttataaataggaccggagggagtat 7785777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 8587170 - 8587301
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    ||||||||||||| ||||| |||| ||| | || ||||||||||||||||| ||||| ||| ||||| ||||| ||||||||||  |||| ||||| |||    
T  8587170 tactccctccggtcctatttataagagaaagtttggtcaacaaaagttgatgtattttgactaaatttttaactagatacatcaacttttattgactcaa 8587269  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
     | | |||||||||||||||| |||| |||||    
T  8587270 gtttctcttataaataagaccggaggaagtat 8587301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 112 - 251
Target Start/End: Complemental strand, 32211493 - 32211354
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| ||||||||||| |  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  32211493 tactacctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaa 32211394  T
Q  212 atgtttcttataaataagaccagagggagtatataatatt 251  Q
    |  | ||||||||||| |||| |||||||||| |||||||    
T  32211393 aattctcttataaataggaccggagggagtatttaatatt 32211354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 110 - 243
Target Start/End: Complemental strand, 39571335 - 39571202
Alignment:
Q  110 attactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgaccc 209  Q
    |||||| |||||||| ||||| |||| ||| |||| | |||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||    
T  39571335 attactacctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccc 39571236  T
Q  210 aaatgtttcttataaataagaccagagggagtat 243  Q
    |||  | ||||||||||| |||| ||||||||||    
T  39571235 aaaattctcttataaataggaccggagggagtat 39571202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 7805829 - 7805698
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||| ||||||||    
T  7805829 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgacccaa 7805730  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| ||||||||||    
T  7805729 aattctcttataaataggaccggagggagtat 7805698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 12763784 - 12763653
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| ||||||||  |||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  12763784 tactacctccggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 12763685  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| ||||||||||    
T  12763684 aattatcttataaataggaccggagggagtat 12763653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 43199484 - 43199353
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||| ||    
T  43199484 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaa 43199385  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| ||||||||||    
T  43199384 aattctcttataaataggaccggagggagtat 43199353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 44498317 - 44498186
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  |||| |||||||||    
T  44498317 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaa 44498218  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| ||||||||||    
T  44498217 aattctcttataaataggaccggagggagtat 44498186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 112 - 246
Target Start/End: Complemental strand, 25601130 - 25600996
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||| | ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| |||||||| |  ||||||||||||||    
T  25601130 tactacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacattaacttttgttgacccaa 25601031  T
Q  212 atgtttcttataaataagaccagagggagtatata 246  Q
    |  | ||||||||||| |||| |||||||||||||    
T  25601030 aattctcttataaataggaccggagggagtatata 25600996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 31654613 - 31654743
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    ||||||||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  31654613 tactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 31654712  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | | ||||||||| |||| |||| ||||    
T  31654713 aattcttttataaataggaccggaggaagta 31654743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 30171483 - 30171613
Alignment:
Q  113 actccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaa 212  Q
    |||||||||| | ||||| | || |||  |||| ||||||||||||| || || |||| ||||||| ||||  |||||||||  |||||||||||  |||    
T  30171483 actccctccgatcctatttacaagagaattttgagtcaacaaaagttaatgtacttggtccaaattcttaatcagatacatcgcattttgttgacttaaa 30171582  T
Q  213 tgtttcttataaataagaccagagggagtat 243  Q
    ||||||||||||||  ||||||| |||||||    
T  30171583 tgtttcttataaatgggaccagacggagtat 30171613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 33289391 - 33289261
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| | |||||| ||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  33289391 tactacctccggtcctatttataagagaaatttagatcaacataagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 33289292  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  33289291 aattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 232
Target Start/End: Complemental strand, 12343271 - 12343150
Alignment:
Q  111 ttactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgaccca 210  Q
    ||||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||| |    
T  12343271 ttactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaa 12343172  T
Q  211 aatgtttcttataaataagacc 232  Q
    ||  | ||||||||||| ||||    
T  12343171 aaattctcttataaataggacc 12343150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 7012171 - 7012302
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| | |||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||| ||||    
T  7012171 tactacctccggtcctatttataagagaaatttagatcaacaaaagtgaatatatttggactgaatttttaactagatacatcaacttttgttgatccaa 7012270  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| |||| |||||    
T  7012271 aattctcttataaataggaccggaggaagtat 7012302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 15888482 - 15888367
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || ||||||||   |||| ||||| ||||||||||  ||||||||||||||    
T  15888482 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaa 15888383  T
Q  212 atgtttcttataaata 227  Q
    |  | |||||||||||    
T  15888382 aattctcttataaata 15888367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 228
Target Start/End: Complemental strand, 12300589 - 12300509
Alignment:
Q  148 tcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaataa 228  Q
    ||||||||||||||| |||||||  |||||| ||||  |||||||||| ||||||||||   |||||||||||| ||||||    
T  12300589 tcaacaaaagttgatctatttggttcaaattcttaatcagatacatcacattttgttgaaataaatgtttcttaaaaataa 12300509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 4460525 - 4460600
Alignment:
Q  164 tatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaataagaccagaggga 239  Q
    ||||||| ||||||| ||||  |||||||||| |||||||||||| |||||||||||| | ||| |||| ||||||    
T  4460525 tatttggtccaaattcttaatcagatacatcacattttgttgaccgaaatgtttcttaaatataggaccggaggga 4460600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 13578857 - 13578972
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| ||||| |||||||| |||| ||| |||| |||||| ||||||  || |||||| ||  |||| ||||| ||||||||||  ||||||||||||||    
T  13578857 tactacctccagttctatttataagagaaatttaggtcaataaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaa 13578956  T
Q  212 atgtttcttataaata 227  Q
    |  | |||||||||||    
T  13578957 aattctcttataaata 13578972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 31654745 - 31654693
Alignment:
Q  110 attactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    |||||| |||||||| ||||| ||||||||  |||||||||||||||||||||    
T  31654745 attacttcctccggtcctatttataaaagaattttgggtcaacaaaagttgat 31654693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 28463616 - 28463671
Alignment:
Q  117 cctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggac 172  Q
    |||||||| ||||| |||| ||| | |||||||||||||||||||| |||||||||    
T  28463616 cctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatttggac 28463671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 54612 - 54662
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  54612 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 54662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 2890162 - 2890212
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  2890162 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 2890212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 6552785 - 6552735
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  6552785 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 6552735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 7785778 - 7785828
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  7785778 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 7785828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 15888352 - 15888402
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    |||||||||| |||||||| |||| |||  |||||||||||||||||||||    
T  15888352 tactccctccagttctatttataagagaattttgggtcaacaaaagttgat 15888402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 33289261 - 33289311
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  33289261 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 33289311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 39571203 - 39571253
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  39571203 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 39571253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 228
Target Start/End: Original strand, 17006914 - 17007027
Alignment:
Q  115 tccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatg 214  Q
    |||||||| | ||||| |||| ||| | ||||||||||||||||||||  || |||||  |||| ||||  ||||||||||  |||| |||||  ||||     
T  17006914 tccctccgatcctatttataagagaaagttgggtcaacaaaagttgatggatctggactgaattgttaatcagatacatcaacttttattgactaaaatt 17007013  T
Q  215 tttcttataaataa 228  Q
    | ||||||||||||    
T  17007014 tctcttataaataa 17007027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 228
Target Start/End: Complemental strand, 17570333 - 17570220
Alignment:
Q  115 tccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatg 214  Q
    |||||||| | ||||| |||| ||| | ||||||||||||||||||||  || |||||  |||| ||||  ||||||||||  |||| |||||  ||||     
T  17570333 tccctccgatcctatttataagagaaagttgggtcaacaaaagttgatggatctggactgaattgttaatcagatacatcaacttttattgactaaaatt 17570234  T
Q  215 tttcttataaataa 228  Q
    | ||||||||||||    
T  17570233 tctcttataaataa 17570220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 27422242 - 27422321
Alignment:
Q  164 tatttggaccaaattattaacaagatacat-catattttgttgacccaaatgtttcttataaataagaccagagggagtat 243  Q
    |||||||||  |||| ||||| |||||||| ||| |||||||||||||||| | ||||||||||| ||||  |||||||||    
T  27422242 tatttggactgaatttttaaccagatacattcat-ttttgttgacccaaatttctcttataaataggaccgaagggagtat 27422321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 33057662 - 33057726
Alignment:
Q  180 ttaacaagatacatcatattttgttgacccaaatgtttcttataaataagaccagagggagtata 244  Q
    ||||| ||||||||||  ||||||||||| || | | |||||||||||||||| || ||||||||    
T  33057662 ttaaccagatacatcaatttttgttgaccaaactttctcttataaataagaccggatggagtata 33057726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 3e-22; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 9395347 - 9395481
Alignment:
Q  109 tattactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacc 208  Q
    ||||||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  |||||||||||    
T  9395347 tattactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 9395446  T
Q  209 caaatgtttcttataaataagaccagagggagtat 243  Q
    ||||  | ||||||||||| |||| ||||||||||    
T  9395447 caaaattctcttataaataggaccggagggagtat 9395481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 13103024 - 13103155
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||  ||||||||||  ||||||||||||||    
T  13103024 tacttcctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaa 13103123  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| ||||||||||    
T  13103124 aattctcttataaataggaccggagggagtat 13103155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 36563668 - 36563537
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||| | ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  36563668 tactacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 36563569  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| ||||||||||    
T  36563568 aattctcttataaataggaccggagggagtat 36563537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 41989537 - 41989406
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| |||||  ||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  41989537 tactacctccggtcctatttgtaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 41989438  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| ||||||||||    
T  41989437 aattctcttataaataggaccggagggagtat 41989406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 37149085 - 37148955
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  37149085 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 37148986  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | | ||||||||| |||| |||||||||    
T  37148985 aattctattataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 11795167 - 11795300
Alignment:
Q  111 ttactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgaccca 210  Q
    ||||| |||||| | ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  |||||||||||||    
T  11795167 ttactacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 11795266  T
Q  211 aatgtttcttataaataagaccagagggagtata 244  Q
    ||  | ||||||||||| |||  |||||||||||    
T  11795267 aaattctcttataaataggactggagggagtata 11795300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 13033051 - 13033182
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||  ||||||||||  ||||||||||||||    
T  13033051 tacttcctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaa 13033150  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| || | ||||||||||    
T  13033151 aattctcttataaataggatcggagggagtat 13033182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 23359942 - 23360072
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||| ||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  23359942 tactacctctggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 23360041  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||| ||||    
T  23360042 aattctcttataaataggaccggaggtagta 23360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 112 - 244
Target Start/End: Original strand, 17025624 - 17025756
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||| ||||||||  || |||||  ||  |||| ||||| ||||||||||  ||||||||||||||    
T  17025624 tactacctccggtcctatttataagagaaatttaggtccacaaaagtgaatgtatttaaactgaatttttaactagatacatcaacttttgttgacccaa 17025723  T
Q  212 atgtttcttataaataagaccagagggagtata 244  Q
    |  | ||||||||||| |||| |||||||||||    
T  17025724 aattctcttataaataggaccggagggagtata 17025756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 242
Target Start/End: Original strand, 20848069 - 20848203
Alignment:
Q  107 cttattactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttga 206  Q
    |||| |||| |||||||| ||||| |||| ||| |||| |||||| ||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||     
T  20848069 cttaatactacctccggtcctatttataagagaaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgc 20848168  T
Q  207 cccaaatgtttcttataaataagaccagagggagta 242  Q
    || |||| | ||||||||||| |||| |||||||||    
T  20848169 ccaaaat-tctcttataaataggaccggagggagta 20848203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 164 - 242
Target Start/End: Original strand, 6126876 - 6126954
Alignment:
Q  164 tatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaataagaccagagggagta 242  Q
    ||||||||| ||||| ||||| ||||||||||  |||||||||||||||  | ||||||||||| |||| |||||||||    
T  6126876 tatttggactaaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 212
Target Start/End: Original strand, 582989 - 583089
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||| ||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  582989 tactacctccggtcctatttataagagaaatttaggtcaacataagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 583088  T
Q  212 a 212  Q
    |    
T  583089 a 583089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 21575975 - 21576079
Alignment:
Q  141 atttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaataagaccagagggag 240  Q
    |||| |||||||||||||  || |||||||||  |||| ||||  ||||||||||  ||||||||| |||||  | ||||||||||| |||| |||||||    
T  21575975 atttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgatccaaaattctcttataaataggaccggagggag 21576074  T
Q  241 tatat 245  Q
    |||||    
T  21576075 tatat 21576079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 26350480 - 26350349
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    ||||||||||| | ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  |||| ||||  |||    
T  26350480 tactccctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgattcaa 26350381  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | | ||||||||| |||| ||||||||||    
T  26350380 aattcttttataaataggaccggagggagtat 26350349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 37148951 - 37149005
Alignment:
Q  108 ttattactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  37148951 ttattactccctccggtcctatttataatagaattttgggtcaacaaaagttgat 37149005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 244
Target Start/End: Original strand, 37641953 - 37642086
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatt-tatttggaccaaattattaacaagatacatcatattttgttgaccca 210  Q
    |||| |||||||| ||||| |||| ||| |||| |||||| ||||  ||| | ||| |||||  |||| ||||| ||||||||||  |||| ||||||||    
T  37641953 tactacctccggtcctatttataagagaaatttaggtcaataaaaagtgaatgtatgtggactgaatttttaactagatacatcaacttttattgaccca 37642052  T
Q  211 aatgtttcttataaataagaccagagggagtata 244  Q
    ||  | ||||||||||| |||| |||||||||||    
T  37642053 aaattctcttataaataggaccggagggagtata 37642086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 208
Target Start/End: Complemental strand, 11574210 - 11574114
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacc 208  Q
    ||||| ||||||| ||||| |||| |||||||| ||||||||||| ||||  ||| ||| |||| || ||||| |||||||| |  |||||||||||    
T  11574210 tactctctccggtcctatttataagagacatttaggtcaacaaaaattgaaatatctggtccaatttgttaactagatacattaacttttgttgacc 11574114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 239
Target Start/End: Original strand, 4443960 - 4444087
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| ||| |||| ||||| |||| ||| |||| |||||||||||||  || ||||| |||  |||| ||||  ||||||||||  ||||||||| | ||    
T  4443960 tacttccttcggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaaatagatacatcaacttttgttgatctaa 4444059  T
Q  212 atgtttcttataaataagaccagaggga 239  Q
    |  | |||||||||||||||| ||||||    
T  4444060 aattctcttataaataagaccggaggga 4444087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 6126954 - 6126904
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  6126954 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 6126904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 9395480 - 9395430
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  9395480 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 9395430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 13103154 - 13103104
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  13103154 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 13103104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 17025754 - 17025704
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  17025754 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 17025704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 36563538 - 36563588
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  36563538 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 36563588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 41989407 - 41989457
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  41989407 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 41989457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 583121 - 583069
Alignment:
Q  109 tattactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    |||||||||||||| | |||| |||||||||  |||||||||||||||||||||    
T  583121 tattactccctccgatcctat-aataaaagaattttgggtcaacaaaagttgat 583069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 2629645 - 2629561
Alignment:
Q  141 atttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaa 225  Q
    |||| |||||||||||||| || ||| ||  | || || ||||| | |||||||| ||||| ||||| |||||||||||||||||    
T  2629645 atttaggtcaacaaaagttaatgtatctgatctaattttttaactatatacatcaaattttattgactcaaatgtttcttataaa 2629561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 3e-22; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 34080160 - 34080030
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||||||||||||||  ||||||||||||||    
T  34080160 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacaagatacatcaacttttgttgacccaa 34080061  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  34080060 aattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 34988075 - 34988205
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||||||| |||| ||||| || | |||||||||||||||||||||||||| ||| ||| |||  || ||||| ||||||||||  | |||||||| |||    
T  34988075 tactcccttcggtcctatttattagagacatttgggtcaacaaaagttgatctatctggtccacttttttaactagatacatcaactattgttgactcaa 34988174  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    || ||||||||||||| |||| |||||||||    
T  34988175 atatttcttataaataggaccggagggagta 34988205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 112 - 244
Target Start/End: Original strand, 37508921 - 37509053
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    ||||||||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  37508921 tactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 37509020  T
Q  212 atgtttcttataaataagaccagagggagtata 244  Q
    |  | ||||||||||| |||| |||| ||||||    
T  37509021 aattctcttataaataggaccggaggtagtata 37509053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 112 - 244
Target Start/End: Complemental strand, 49823511 - 49823379
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  49823511 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 49823412  T
Q  212 atgtttcttataaataagaccagagggagtata 244  Q
    |  | ||||||||||| |||| |||||||||||    
T  49823411 aattctcttataaataggaccggagggagtata 49823379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 10297979 - 10298110
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  10297979 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 10298078  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| ||||||||||    
T  10298079 aattctcttataaataggaccggagggagtat 10298110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 17653712 - 17653843
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    ||||||||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  17653712 tactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 17653811  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| |||| |||||    
T  17653812 aattctcttataaataggaccggaggtagtat 17653843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 19557182 - 19557052
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  19557182 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 19557083  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  19557082 aattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 112 - 246
Target Start/End: Original strand, 51406673 - 51406807
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| ||||||||  |||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  51406673 tactacctccggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaa 51406772  T
Q  212 atgtttcttataaataagaccagagggagtatata 246  Q
    |  | ||||||||||| |||| |||||||||||||    
T  51406773 aattctcttataaataggaccggagggagtatata 51406807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 112 - 245
Target Start/End: Original strand, 22721931 - 22722064
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  22721931 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 22722030  T
Q  212 atgtttcttataaataagaccagagggagtatat 245  Q
    |  | ||||||||||| |||| || |||||||||    
T  22722031 aattctcttataaataggaccggatggagtatat 22722064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 112 - 244
Target Start/End: Original strand, 46208030 - 46208162
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    ||||||||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||  ||||||||||  ||||||||||| ||    
T  46208030 tactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacctaa 46208129  T
Q  212 atgtttcttataaataagaccagagggagtata 244  Q
    |  | ||||||||||| |||| |||||||||||    
T  46208130 aattctcttataaataggaccggagggagtata 46208162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 53275310 - 53275410
Alignment:
Q  127 tattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaat 226  Q
    |||| |||||||| |||||||||||||||| ||||| |||||   ||||||| ||||  |||||||||||||||||||||||  ||| ||||||||||||    
T  53275310 tatttataaaagatatttgggtcaacaaaaattgatgtatttaatccaaattcttaattagatacatcatattttgttgaccttaatatttcttataaat 53275409  T
Q  227 a 227  Q
    |    
T  53275410 a 53275410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 9213516 - 9213646
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    ||||||||||||| ||||| |||||||||||||  |||||||||||||||| ||| ||||| || ||  |||| | ||||||||  ||||||||||| ||    
T  9213516 tactccctccggtcctatttataaaagacattttagtcaacaaaagttgatgtatctggactaattttataaccaaatacatcaatttttgttgacctaa 9213615  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    || | ||| ||||||| |||  |||||||||    
T  9213616 atttctctaataaataggacgggagggagta 9213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 48340397 - 48340527
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| | || ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  48340397 tactacctccggtcctatttacaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 48340496  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  48340497 aattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 118 - 243
Target Start/End: Complemental strand, 40691120 - 40690995
Alignment:
Q  118 ctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgttt 217  Q
    ||||||| ||||| |||| ||| |||| ||| |||||||||  || |||||||||  |||| ||||| ||||||||||  |||||||||||||||  | |    
T  40691120 ctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 40691021  T
Q  218 cttataaataagaccagagggagtat 243  Q
    |||||||||| |||| ||||||||||    
T  40691020 cttataaataggaccggagggagtat 40690995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 118 - 242
Target Start/End: Complemental strand, 2787956 - 2787832
Alignment:
Q  118 ctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgttt 217  Q
    ||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||| |||||||||  | |    
T  2787956 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgacccaaaattct 2787857  T
Q  218 cttataaataagaccagagggagta 242  Q
    |||||||||| |||| |||||||||    
T  2787856 cttataaataggaccggagggagta 2787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 244
Target Start/End: Original strand, 8437425 - 8437557
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||| ||||||  || |||||||||  |||| ||||| ||||||||||  |||||||||| |||    
T  8437425 tactacctccggtcctatttataagagaaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaa 8437524  T
Q  212 atgtttcttataaataagaccagagggagtata 244  Q
    |  | ||||||||||| |||| |||||||||||    
T  8437525 aattctcttataaataggaccggagggagtata 8437557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 4238594 - 4238725
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||| ||    
T  4238594 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaa 4238693  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| |||| |||||    
T  4238694 aattctcttataaataggaccggaggtagtat 4238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 8817516 - 8817385
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| ||| |||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  8817516 tactaccttcggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 8817417  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| || |||||||    
T  8817416 aattctcttataaataggaccggaaggagtat 8817385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 33943062 - 33942947
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||||| |||| | ||||| |||||||| | || |||||||||||||| || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  33943062 tactccttccgatcctatttataaaagaaagttaggtcaacaaaagttaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 33942963  T
Q  212 atgtttcttataaata 227  Q
     | | |||||||||||    
T  33942962 gtttctcttataaata 33942947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 36095810 - 36095679
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    ||||||||||||| ||||| |||| | | |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||| ||||    
T  36095810 tactccctccggtcctatttataagataaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgatccaa 36095711  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | |||| ||||||||||| ||| ||||||    
T  36095710 aattctcttgtaaataagaccggagtgagtat 36095679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 112 - 239
Target Start/End: Complemental strand, 42507485 - 42507358
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| | ||| ||||||||||  ||||||||||||||    
T  42507485 tactacctccggtcctatttataatagaaatttaggtcaacaaaagtgaatgtatttggactgaattttgaactagatacatcaacttttgttgacccaa 42507386  T
Q  212 atgtttcttataaataagaccagaggga 239  Q
    |  | ||||||||||| |||| ||||||    
T  42507385 aattctcttataaataggaccggaggga 42507358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 44785526 - 44785411
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  44785526 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 44785427  T
Q  212 atgtttcttataaata 227  Q
    |  | |||||||||||    
T  44785426 aattctcttataaata 44785411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 21295456 - 21295326
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||  ||||||||||  ||||||||||| ||    
T  21295456 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgacctaa 21295357  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  21295356 aattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 38964392 - 38964522
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| | |||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||| ||    
T  38964392 tactacctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaa 38964491  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  38964492 aattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 42170476 - 42170346
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| ||||||||  |||| |||| ||| |||| |||||||||||||  || ||||||||   |||| ||||| ||||||||||  ||||||||||||||    
T  42170476 tactacctccggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggagtgaatttttaaccagatacatcaacttttgttgacccaa 42170377  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| ||||||| ||||||    
T  42170376 aattctcttataaataggaccagatggagta 42170346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 245
Target Start/End: Complemental strand, 9111624 - 9111491
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| ||| |||| ||||| |||| ||| |||| |||||||||||||  || |||||| ||  |||| ||||| ||||||||||  ||||||||||||||    
T  9111624 tactaccttcggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaa 9111525  T
Q  212 atgtttcttataaataagaccagagggagtatat 245  Q
    |  | ||||||||||| |||| |||||| |||||    
T  9111524 aattctcttataaataggaccggagggaatatat 9111491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 53275349 - 53275287
Alignment:
Q  188 atacatcatattttgttgacccaaatgtttcttataaataagaccagagggagtatataatat 250  Q
    ||||||||  |||||||||||||||| | | |||||||||| |||| ||||||||||||||||    
T  53275349 atacatcaatttttgttgacccaaatatcttttataaataataccaaagggagtatataatat 53275287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 2131804 - 2131699
Alignment:
Q  110 attactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgaccc 209  Q
    ||||||||||||||| ||| | || | |||||||||||||||||||||||||| ||| ||| | ||||| |  || || ||||  |  ||||||||||||    
T  2131804 attactccctccggtcctacttatgagagacatttgggtcaacaaaagttgatgtatctggtctaaattttgcaccaggtacagtaacttttgttgaccc 2131705  T
Q  210 aaatgt 215  Q
    ||||||    
T  2131704 aaatgt 2131699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 35513471 - 35513556
Alignment:
Q  110 attactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatca 195  Q
    |||||||||| |||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||    
T  35513471 attactcccttcggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 35513556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 48340529 - 48340477
Alignment:
Q  110 attactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  48340529 attactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 48340477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 242
Target Start/End: Complemental strand, 6013463 - 6013336
Alignment:
Q  115 tccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatg 214  Q
    ||||||| || | ||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||| ||    |||||||||||||||      
T  6013463 tccctccagtccaatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataaatttacttttgttgacccaaaat 6013364  T
Q  215 tttcttataaataagaccagagggagta 242  Q
    | ||||||||||| |||| |||||||||    
T  6013363 tctcttataaataggaccggagggagta 6013336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 10298109 - 10298059
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  10298109 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 10298059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 19557052 - 19557102
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  19557052 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 19557102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 34080030 - 34080080
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  34080030 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 34080080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 40690996 - 40691046
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  40690996 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 40691046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 42507351 - 42507405
Alignment:
Q  108 ttattactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    |||||| |||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  42507351 ttattattccctccggtcctatttataagagaattttgggtcaacaaaagttgat 42507405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 44785396 - 44785446
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    |||| |||||||||||||| |||| |||  |||||||||||||||||||||    
T  44785396 tacttcctccggttctatttataagagaattttgggtcaacaaaagttgat 44785446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 49823381 - 49823431
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  49823381 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 49823431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 242
Target Start/End: Original strand, 2131697 - 2131802
Alignment:
Q  137 agacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaataagaccagag 236  Q
    |||||||||||||||||||||||  | ||  |||  |||| | |  || ||||||||||  |||||||||||||||||| ||| |||| || |||| |||    
T  2131697 agacatttgggtcaacaaaagttactgtacctggtgcaaaatttagaccagatacatcaacttttgttgacccaaatgtctctcataagtaggaccggag 2131796  T
Q  237 ggagta 242  Q
    ||||||    
T  2131797 ggagta 2131802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 246
Target Start/End: Complemental strand, 5237640 - 5237536
Alignment:
Q  141 atttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaataagaccagagggag 240  Q
    ||||||||||||||||||| || ||| | ||||||||| | ||  ||||||||||  |||||||||   ||| || | |||||||||||| |||| ||||    
T  5237640 atttgggtcaacaaaagtt-atatatctagaccaaattttgaattagatacatcaatttttgttgaaaaaaacgtcttttataaataagatcagaaggag 5237542  T
Q  241 tatata 246  Q
    ||||||    
T  5237541 tatata 5237536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 5323340 - 5323279
Alignment:
Q  109 tattactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttgg 170  Q
    |||||||||||||| | ||||| ||||   | |||||||||||||||||||||| |||||||    
T  5323340 tattactccctccgatactatttataagtaaaatttgggtcaacaaaagttgatgtatttgg 5323279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 6013333 - 6013382
Alignment:
Q  109 tattactccctccggttctattaataaaagacatttgggtcaacaaaagt 158  Q
    |||||||||||||||| ||||| |||| |||  |||||||||||||||||    
T  6013333 tattactccctccggtcctatttataagagaattttgggtcaacaaaagt 6013382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 9027210 - 9027141
Alignment:
Q  174 aaattattaacaagatacatcatattttgttgacccaaatgtttcttataaataagaccagagggagtat 243  Q
    ||||| |||||  |||||||||  |||||||||||||| | | ||||||||||| |||| ||||||||||    
T  9027210 aaattgttaacctgatacatcaacttttgttgacccaactttatcttataaataggaccggagggagtat 9027141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 21663003 - 21663035
Alignment:
Q  210 aaatgtttcttataaataagaccagagggagta 242  Q
    ||||||||||||||||||||||| |||||||||    
T  21663003 aaatgtttcttataaataagaccggagggagta 21663035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 43323091 - 43323143
Alignment:
Q  143 ttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatca 195  Q
    |||||||||||||||||||| ||||||||  ||||| ||||| | ||||||||    
T  43323091 ttgggtcaacaaaagttgatgtatttggattaaatttttaaccaaatacatca 43323143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 6261 - 6130
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || ||| |||||  |||| ||||| ||||||||||  ||||||||||||||    
T  6261 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatgtggactgaatttttaactagatacatcaacttttgttgacccaa 6162  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  ||||||||||||| |||| ||||||||||    
T  6161 aattttcttataaataggaccggagggagtat 6130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 2e-20; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 11897054 - 11897185
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    ||||||||||||| ||||| |||| ||| | || ||||||||||||||||| ||| || ||  |||| |||||  |||||||||  ||||||||||||||    
T  11897054 tactccctccggtcctatttataagagaaagttaggtcaacaaaagttgatgtatctgaactgaatttttaaccggatacatcaacttttgttgacccaa 11897153  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    || | ||||||||||| |||| ||||||||||    
T  11897154 atttctcttataaataggaccggagggagtat 11897185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 109 - 244
Target Start/End: Complemental strand, 47216832 - 47216697
Alignment:
Q  109 tattactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacc 208  Q
    ||||||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  |||||||||||    
T  47216832 tattactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 47216733  T
Q  209 caaatgtttcttataaataagaccagagggagtata 244  Q
    ||||  | |||||||||||  ||| |||||||||||    
T  47216732 caaaattctcttataaatagtaccggagggagtata 47216697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 27159488 - 27159358
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  27159488 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 27159389  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  27159388 aattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 31842925 - 31842795
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  31842925 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 31842826  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  31842825 aattctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 39402096 - 39401966
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  39402096 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 39401997  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  39401996 aattctcttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 44668223 - 44668093
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  44668223 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 44668124  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  44668123 aattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 243
Target Start/End: Original strand, 14984843 - 14984968
Alignment:
Q  118 ctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgttt 217  Q
    ||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  |||||||||||||||  | |    
T  14984843 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 14984942  T
Q  218 cttataaataagaccagagggagtat 243  Q
    |||||||||| |||| ||||||||||    
T  14984943 cttataaataggaccggagggagtat 14984968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 112 - 239
Target Start/End: Original strand, 9981647 - 9981774
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  9981647 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 9981746  T
Q  212 atgtttcttataaataagaccagaggga 239  Q
    |  | ||||||||||| |||| ||||||    
T  9981747 aattctcttataaataggaccggaggga 9981774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 11795933 - 11796063
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  ||  ||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  11795933 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgcatttggactgaatttttaactagatacatcaacttttgttgacccaa 11796032  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  11796033 aattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 26471195 - 26471065
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||||||| ||||    
T  26471195 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgatccaa 26471096  T
Q  212 atgtttcttataaataagaccagagggagta 242  Q
    |  | ||||||||||| |||| |||||||||    
T  26471095 aattctcttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 110 - 243
Target Start/End: Original strand, 1050886 - 1051019
Alignment:
Q  110 attactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgaccc 209  Q
    |||||| |||||||| ||||| |||| ||| |||| |||||||||||||  ||  ||||||||  |||| ||||| ||||||||||  ||| ||||||||    
T  1050886 attactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgcatttggactgaatttttaactagatacatcaactttagttgaccc 1050985  T
Q  210 aaatgtttcttataaataagaccagagggagtat 243  Q
    |||  | ||||||||||| |||| ||||||||||    
T  1050986 aaaattctcttataaataggaccggagggagtat 1051019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 17556752 - 17556884
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatt-tatttggaccaaattattaacaagatacatcatattttgttgaccca 210  Q
    ||||||||| ||| ||||| |||| ||| | || |||||||||||||| | | |||||||||  |||| ||||| ||||||||||  |||||||||||||    
T  17556752 tactccctctggtcctatttataagagaaagttaggtcaacaaaagttaaatgtatttggactgaatttttaactagatacatcaacttttgttgaccca 17556851  T
Q  211 aatgtttcttataaataagaccagagggagtat 243  Q
    | | | ||||||||||| |||| ||||||||||    
T  17556852 agtttctcttataaataggaccggagggagtat 17556884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 104 - 243
Target Start/End: Complemental strand, 12483766 - 12483627
Alignment:
Q  104 taacttattactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgt 203  Q
    ||||||| |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || ||||| |||  |||| | ||| | ||||||||  ||||||    
T  12483766 taacttaatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaattttgaactaaatacatcaacttttgt 12483667  T
Q  204 tgacccaaatgtttcttataaataagaccagagggagtat 243  Q
    |||||||||  | ||||||||||| |||| ||||||||||    
T  12483666 tgacccaaaattctcttataaataggaccggagggagtat 12483627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 34042696 - 34042827
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| ||||||||||| |  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  34042696 tactacctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 34042795  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | |||||||||||  ||| ||||||||||    
T  34042796 aattctcttataaatagaaccggagggagtat 34042827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 120 - 242
Target Start/End: Complemental strand, 47777603 - 47777481
Alignment:
Q  120 ccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttct 219  Q
    ||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| | ||| ||||||||||  |||||||||||||||  | |||    
T  47777603 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaattttgaactagatacatcaacttttgttgacccaaaattctct 47777504  T
Q  220 tataaataagaccagagggagta 242  Q
    |||||||| |||| |||||||||    
T  47777503 tataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 16448238 - 16448139
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    ||||||||||||| ||||| |||| ||| | |||||||||||||||||||| ||| |||||  |||| | ||| |||||||| |  ||||||||||||||    
T  16448238 tactccctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatctggactgaattttgaaccagatacataaacttttgttgacccaa 16448139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 110 - 232
Target Start/End: Complemental strand, 44955338 - 44955216
Alignment:
Q  110 attactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgaccc 209  Q
    |||||| |||||||| ||||| |||| | | |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  |||||||||||     
T  44955338 attactacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacct 44955239  T
Q  210 aaatgtttcttataaataagacc 232  Q
    |||  | ||||||||||| ||||    
T  44955238 aaaattctcttataaataggacc 44955216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 112 - 245
Target Start/End: Original strand, 25694319 - 25694452
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    ||||||||| | | ||||| |||| ||| |||| | |||| ||||||  || ||||||||   |||| ||||| ||||||||||  ||||||||||||||    
T  25694319 tactccctctgatcctatttataagagaaatttagatcaataaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaa 25694418  T
Q  212 atgtttcttataaataagaccagagggagtatat 245  Q
    |  | ||||||||||| |||| ||||||||||||    
T  25694419 aattctcttataaataggaccggagggagtatat 25694452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 112 - 244
Target Start/End: Original strand, 37552141 - 37552273
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacat-catattttgttgaccca 210  Q
    ||||||||||||| ||||| |||| | | | ||| |||||||| |||| || ||| |||||  |||| ||||| |||||||| ||| |||||||||||||    
T  37552141 tactccctccggtcctatttataagataaagttgagtcaacaacagttcatgtatctggactgaatttttaaccagatacattcat-ttttgttgaccca 37552239  T
Q  211 aatgtttcttataaataagaccagagggagtata 244  Q
    ||| | ||||||||||| |||| | |||||||||    
T  37552240 aatttctcttataaataggaccggggggagtata 37552273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 212
Target Start/End: Complemental strand, 23278131 - 23278031
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| ||||||||||| |  || |||||||||  |||| ||||| ||||||||||  ||||||||||||||    
T  23278131 tactacctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 23278032  T
Q  212 a 212  Q
    |    
T  23278031 a 23278031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 47588452 - 47588336
Alignment:
Q  127 tattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaat 226  Q
    |||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||  ||||||||||  |||||||||||||||  | ||||||||||    
T  47588452 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgacccaaaattctcttataaat 47588353  T
Q  227 aagaccagagggagtat 243  Q
    || |||  |||||||||    
T  47588352 aaaaccgaagggagtat 47588336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 47969694 - 47969826
Alignment:
Q  112 tactccctccggttctattaataaa-agacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgaccca 210  Q
    ||||| ||||||| ||||| ||||| ||| |||| |||||||||||||  || ||||| |||  |||| ||||| ||||||||||  ||||||||| |||    
T  47969694 tactctctccggtcctatttataaagagaaatttaggtcaacaaaagtaaatgtatttagactgaatttttaactagatacatcaacttttgttgatcca 47969793  T
Q  211 aatgtttcttataaataagaccagagggagtat 243  Q
    ||  | | ||||||||| |||| ||||||||||    
T  47969794 aaattattttataaataggaccggagggagtat 47969826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 11897184 - 11897134
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| ||| ||||||||||||||||||||||    
T  11897184 tactccctccggtcctatttataagagaaatttgggtcaacaaaagttgat 11897134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 11989915 - 11989853
Alignment:
Q  108 ttattactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttgg 170  Q
    ||||||||||||||||| ||||| |||||||| ||||| ||||| |||| ||||| |||||||    
T  11989915 ttattactccctccggtcctatttataaaagaaatttgagtcaataaaaattgatgtatttgg 11989853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 34042826 - 34042776
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||||||||| |||| |||  |||||||||||||||||||||    
T  34042826 tactccctccggttctatttataagagaattttgggtcaacaaaagttgat 34042776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 39401963 - 39402016
Alignment:
Q  109 tattactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    |||||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  39401963 tattactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 39402016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 12483628 - 12483684
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttattt 168  Q
    ||||||||||||| ||||| |||| |||  ||||||||||||||||||||| |||||    
T  12483628 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtattt 12483684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 31842793 - 31842845
Alignment:
Q  110 attactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  31842793 attactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 31842845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 47777479 - 47777531
Alignment:
Q  110 attactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  47777479 attactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 47777531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 11796064 - 11796013
Alignment:
Q  111 ttactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    |||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  11796064 ttactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 11796013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 12043618 - 12043723
Alignment:
Q  126 ctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaa 225  Q
    ||||| |||||||| ||||  |||||||||||||||| ||||| ||   |||| |||||||||||||| |  |||||||||   |||| |||||||||||    
T  12043618 ctatttataaaagatatttaagtcaacaaaagttgatgtattt-gattcaatttttaacaagatacattaatttttgttgatttaaatttttcttataaa 12043716  T
Q  226 taagacc 232  Q
    || ||||    
T  12043717 taggacc 12043723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 14984967 - 14984917
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  14984967 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 14984917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 16448182 - 16448240
Alignment:
Q  186 agatacatcatattttgttgacccaaatgtttcttataaataagaccagagggagtata 244  Q
    ||||||||||  |||||||||||||| | | ||||||||||| |||| |||||||||||    
T  16448182 agatacatcaacttttgttgacccaactttctcttataaataggaccggagggagtata 16448240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 17556883 - 17556833
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| ||| | ||||||||||||||||||||    
T  17556883 tactccctccggtcctatttataagagaaacttgggtcaacaaaagttgat 17556833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 25694449 - 25694399
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  25694449 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 25694399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 27159358 - 27159408
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  27159358 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 27159408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 232
Target Start/End: Complemental strand, 40676833 - 40676799
Alignment:
Q  198 ttttgttgacccaaatgtttcttataaataagacc 232  Q
    ||||||||||| |||||||||||||||||||||||    
T  40676833 ttttgttgaccaaaatgtttcttataaataagacc 40676799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 44668093 - 44668143
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  44668093 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgat 44668143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 47216699 - 47216749
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||| ||||| |||| |||  |||||||||||||||||||||    
T  47216699 tactccctccggtactatttataagagaattttgggtcaacaaaagttgat 47216749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 38040308 - 38040267
Alignment:
Q  209 caaatgtttcttataaataagaccagagggagtatataatat 250  Q
    ||||||||||||||||||| ||||  ||||||||||||||||    
T  38040308 caaatgtttcttataaataggaccgaagggagtatataatat 38040267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 47588423 - 47588468
Alignment:
Q  198 ttttgttgacccaaatgtttcttataaataagaccagagggagtat 243  Q
    ||||||||||| |||| | ||||||||||||||||||||| |||||    
T  47588423 ttttgttgacctaaatttctcttataaataagaccagaggtagtat 47588468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 19610867 - 19610779
Alignment:
Q  155 aagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaataagaccagagggagtat 243  Q
    |||||||| ||||| | ||| ||||| ||| | ||||||||  |||||||||||||  ||| ||||||||| | ||| |||||||||||    
T  19610867 aagttgatgtatttagtccatattatgaactaaatacatcaatttttgttgacccatttgtatcttataaaaaggacaagagggagtat 19610779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 26471063 - 26471115
Alignment:
Q  110 attactccctccggttctattaataaaagacatttgggtcaacaaaagttgat 162  Q
    ||||||||||||||| ||||| |||| |||  ||||| |||||||||||||||    
T  26471063 attactccctccggtcctatttataagagaattttggatcaacaaaagttgat 26471115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 112 - 248
Target Start/End: Original strand, 49505 - 49641
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| | ||||||||  ||||||||||||||    
T  49505 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 49604  T
Q  212 atgtttcttataaataagaccagagggagtatataat 248  Q
    |  | ||||||||||| |||| ||||||||| |||||    
T  49605 aattctcttataaataggaccggagggagtaaataat 49641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 49636 - 49579
Alignment:
Q  111 ttactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttattt 168  Q
    |||||||||||||| ||||| |||| |||  ||||||||||||||||||||| |||||    
T  49636 ttactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtattt 49579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 12860 - 12991
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaa 211  Q
    |||| |||||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  ||||| ||||||||    
T  12860 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgacccaa 12959  T
Q  212 atgtttcttataaataagaccagagggagtat 243  Q
    |  | ||||||||||| |||| ||||||||||    
T  12960 aattctcttataaataggaccggagggagtat 12991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 115 - 225
Target Start/End: Complemental strand, 12480 - 12370
Alignment:
Q  115 tccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatg 214  Q
    |||||||||| ||||| |||| ||| |||| |||||| |||||||| | | ||||| | ||||| ||||| |||||||||| ||||||||||||  ||||    
T  12480 tccctccggtcctatttataagagatattttggtcaaaaaaagttggtgtgtttggtctaaattcttaaccagatacatcacattttgttgacctgaatg 12381  T
Q  215 tttcttataaa 225  Q
    |||||||||||    
T  12380 tttcttataaa 12370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 119 - 227
Target Start/End: Original strand, 1342 - 1450
Alignment:
Q  119 tccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttc 218  Q
    |||||| ||||| |||| ||| |||| |||||||||||||  || |||||||||  |||| ||||| ||||||||||  |||||||||||||||  | ||    
T  1342 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctc 1441  T
Q  219 ttataaata 227  Q
    |||||||||    
T  1442 ttataaata 1450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 207
Target Start/End: Complemental strand, 114 - 20
Alignment:
Q  112 tactccctccggttctattaataaaagacatttgggtcaacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgac 207  Q
    ||||||||||||||||||| ||| | || |  | ||||||||||||||||| ||||||||| ||||| ||||| | ||||||||  ||||||||||    
T  114 tactccctccggttctatttataga-gaaagattggtcaacaaaagttgatgtatttggactaaatttttaaccaaatacatcaacttttgttgac 20  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 30099 - 30008
Alignment:
Q  150 aacaaaagttgatttatttggaccaaattattaacaagatacatcatattttgttgacccaaatgtttcttataaataagaccagagggagta 242  Q
    ||||||||| ||| ||||||| | ||||| ||||| ||||||||||| |||| |||||  |||||||| |||||| || || || ||||||||    
T  30099 aacaaaagtagatgtatttggtctaaattcttaactagatacatcatcttttattgacataaatgttt-ttataattatgaacatagggagta 30008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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